Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008439

Physical Location & Seq

Genomic Coordinates Forward (+)

20743076 .. 20746409

Gene Structure 3334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G241200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGGACGGAAACAAAGACGATGCTTTGAAATGCTTCAAAATTGGGAAAGAAGCTTTGGAAGCTGGGGATCGAACTCGTGCCCTAAAATTCCTAACTAAAGCTCGACGTCTCGATCCGACGCTACCCATCGACGATCTCTTATCGTCGATTGAGGGCAATTCCAATCCTCAGTCCGGTTCAGATGCTGGTGGGTCTGCCAATGGGCCATCTGGGTCGGCTTCAGCTAAGCCGTCCGATCAACCCTCGCTTCGCCAAAGAGTTCCGTCAACTGATGGATCTTCATCCTCTAAAGAATCACCAGCTGCTGCGTACACGGAGGAGCAGATTGCGATTGTGAGGCAACTGAAGAAGAAGAAGGATTACTATGAGATTTTGGGGGTGGAAAAGAGCTGCACTGTTGAAGATGTTCGGAAGGCTTATAGAAAACTGTCTTTGAAGGTTCACCCGGATAAGAACAAGGCGCCGGGAGCTGAGGAAGCGTTTAAGGCTGTGTCGAAGGCGTTTCAGTGTCTTAGCAATCAAGAGAGTAGGAAAAAATATGATGTTATGGGCTCGGATGAGCCTGTTTACGAGAGACGTGCTTCCAGCCATGCACATGGATTTAATGGTTTTTATGATGGGGATGTTGATGCTGAGGAGATCTTTAGGAACTTCTTCTTTGGAGGAATGGCACCGGCAACCCAGTTCCGTGGATTCAGTTTTGGGCATGGCGGAATGGGACAGAGGGCTGGTGGTGATCATGGTTCTGGTGGGTCCCATATTCGGACTCTAATTCAGTTGTTGCCTGTGTTGCTTATTCTGCTTGTCAACTTTATGCCATCTTCGGAGCCTATCTATGCCCTTTCCAGGTCCTATCCCTATGAATACCGCTTTACTACGGAAAAGGGTGTTAATTTTTATGTTAGGTCAACCAAGTTTGAGCAGGATTTCCCGCCAGGTAGCTCGGAGCGTGTCACGTTAGAGCAACGCGTTGAGAGAGAATACTTCAATATTCTTTCCCAGAACTGTAGACTTGAGCTGCAGCGCCGCCAGTGGGGATTTATTCGTGAAACACCACATTGTGACATGTTGCAACGGTTTGAGACGGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

DUF1977 DnaJ

Protein Analysis

365

Amino Acids

40.56

Weight (kDa)

8.44

Isoelectric Point (pI)

54.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57340 AT3G57340
fragaria_vesca	FvH4_1g03490 FvH4_1g03490
malus_domestica	MD02G1033900.v1.1 MD15G1174700.v1.1
prunus_persica	Prupe.7G241200_v2.0.a1 Prupe.7G241200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0088701
rosa_laevigata	RLG00000015977
rosa_multiflora	Rmu_co7978266.1_g000001 Rmu_sc0006835.1_g000007 Rmu_sc0015442.1_g000016
rosa_roxburghii	Rroxscaffold_2G00152390
rosa_rugosa	Rorug01G0486000.1 Rorug01G0486100 Rorug01G0486200
rosa_samantha	Rh2AG041500 Rh2BG040200 Rh2CG041100 Rh2DG040600 Rh5CG346200
rosa_wichuraiana	Rw2G003290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	109
AccB1I	GGYRCC	2 cut(s)	460, 670
AccI	GTMKAC	1 cut(s)	1009
AccII	CGCG	1 cut(s)	969
AciI	CCGC	4 cut(s)	711, 868, 932, 1027
AclWI	GGATC	3 cut(s)	75, 107, 283
AcsI	RAATTY	1 cut(s)	86
AcuI	CTGAAG	2 cut(s)	204, 365
AcyI	GRCGYC	2 cut(s)	106, 461
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	1 cut(s)	311
AfiI	CCNNNNNNNGG	4 cut(s)	173, 762, 846, 1033
AflIII	ACRYGT	2 cut(s)	967, 1065
AgsI	TTSAA	5 cut(s)	28, 37, 401, 436, 988
AjiI	CACGTC	1 cut(s)	578
AjnI	CCWGG	2 cut(s)	845, 934
AjuI	GAANNNNNNNTTGG	2 cut(s)	38, 70
Alw26I	GTCTC	3 cut(s)	113, 568, 1076
AlwI	GGATC	3 cut(s)	75, 107, 283
AlwNI	CAGNNNCTG	2 cut(s)	185, 305
AoxI	GGCC	1 cut(s)	203
ApeKI	GCWGC	6 cut(s)	302, 305, 390, 1018, 1021, 1088
ApoI	RAATTY	1 cut(s)	86
Asp700I	GAANNNNTTC	3 cut(s)	32, 405, 653
AspLEI	GCGC	2 cut(s)	463, 1026
AspS9I	GGNCC	3 cut(s)	203, 753, 849
AsuC2I	CCSGG	2 cut(s)	446, 465
AsuHPI	GGTGA	3 cut(s)	288, 434, 746
AvaII	GGWCC	2 cut(s)	753, 849
BaeGI	GKGCMC	1 cut(s)	82
BanI	GGYRCC	2 cut(s)	460, 670
BanII	GRGCYC	1 cut(s)	554
BarI	GAAGNNNNNNTAC	2 cut(s)	344, 376
BauI	CACGAG	1 cut(s)	75
BbvCI	CCTCAGC	2 cut(s)	471, 633
BbvI	GCAGC	5 cut(s)	289, 292, 377, 1005, 1033
BccI	CCATC	5 cut(s)	134, 214, 266, 611, 826
BceAI	ACGGC	1 cut(s)	214
BcgI	CGANNNNNNTGC	2 cut(s)	560, 594
BciT130I	CCWGG	2 cut(s)	847, 936
BclI	TGATCA	1 cut(s)	736
BcnI	CCSGG	2 cut(s)	446, 465
BcoDI	GTCTC	3 cut(s)	113, 568, 1076
BfmI	CTRYAG	2 cut(s)	1006, 1019
BfoI	RGCGCY	2 cut(s)	464, 1027
BglII	AGATCT	1 cut(s)	639
BisI	GCNGC	7 cut(s)	303, 306, 391, 1019, 1022, 1027, 1089
BlpI	GCTNAGC	1 cut(s)	225
BlsI	GCNGC	7 cut(s)	304, 307, 392, 1020, 1023, 1028, 1090
Bme1390I	CCNGG	4 cut(s)	446, 465, 847, 936
Bme18I	GGWCC	2 cut(s)	753, 849
BmgBI	CACGTC	1 cut(s)	578
BmgT120I	GGNCC	3 cut(s)	203, 753, 849
BmiI	GGNNCC	5 cut(s)	462, 672, 754, 755, 828
BmrFI	CCNGG	4 cut(s)	446, 465, 847, 936
BmrI	ACTGGG	1 cut(s)	676
BmsI	GCATC	3 cut(s)	10, 172, 619
BmuI	ACTGGG	1 cut(s)	676
Bpu10I	CCTNAGC	2 cut(s)	471, 633
Bpu1102I	GCTNAGC	1 cut(s)	225
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	2 cut(s)	446, 465
BsaBI	GATNNNNATC	1 cut(s)	280
BsaHI	GRCGYC	2 cut(s)	106, 461
BsaJI	CCNNGG	1 cut(s)	688
BsaWI	WCCGGW	1 cut(s)	173
Bsc4I	CCNNNNNNNGG	4 cut(s)	173, 762, 846, 1033
Bse118I	RCCGGY	1 cut(s)	673
Bse1I	ACTGG	2 cut(s)	682, 1030
Bse8I	GATNNNNATC	1 cut(s)	280
BseBI	CCWGG	2 cut(s)	847, 936
BseDI	CCNNGG	1 cut(s)	688
BseGI	GGATG	3 cut(s)	281, 562, 628
BseJI	GATNNNNATC	1 cut(s)	280
BseLI	CCNNNNNNNGG	4 cut(s)	173, 762, 846, 1033
BseMII	CTCAG	3 cut(s)	182, 462, 624
BseNI	ACTGG	2 cut(s)	682, 1030
BseRI	GAGGAG	2 cut(s)	332, 650
BseSI	GKGCMC	1 cut(s)	82
BseXI	GCAGC	5 cut(s)	289, 292, 377, 1005, 1033
BseYI	CCCAGC	1 cut(s)	62
BsgI	GTGCAG	1 cut(s)	376
Bsh1236I	CGCG	1 cut(s)	969
BshFI	GGCC	1 cut(s)	205
BshNI	GGYRCC	2 cut(s)	460, 670
BsiSI	CCGG	4 cut(s)	174, 446, 464, 674
BslFI	GGGAC	2 cut(s)	732, 739
BslI	CCNNNNNNNGG	4 cut(s)	173, 762, 846, 1033
BsmAI	GTCTC	3 cut(s)	113, 568, 1076
BsmBI	CGTCTC	3 cut(s)	113, 568, 1076
BsmFI	GGGAC	2 cut(s)	732, 739
BsnI	GGCC	1 cut(s)	205
Bsp1286I	GDGCHC	2 cut(s)	82, 554
Bsp143I	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
Bsp1720I	GCTNAGC	1 cut(s)	225
BspACI	CCGC	4 cut(s)	711, 868, 932, 1027
BspANI	GGCC	1 cut(s)	205
BspCNI	CTCAG	3 cut(s)	181, 463, 625
BspFNI	CGCG	1 cut(s)	969
BspLI	GGNNCC	5 cut(s)	462, 672, 754, 755, 828
BspMAI	CTGCAG	1 cut(s)	1023
BspPI	GGATC	3 cut(s)	75, 107, 283
BspT107I	GGYRCC	2 cut(s)	460, 670
BsrFI	RCCGGY	1 cut(s)	673
BsrI	ACTGG	2 cut(s)	682, 1030
BssAI	RCCGGY	1 cut(s)	673
BssECI	CCNNGG	1 cut(s)	688
BssMI	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
BssNI	GRCGYC	2 cut(s)	106, 461
BssSI	CACGAG	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	75
Bst2UI	CCWGG	2 cut(s)	847, 936
Bst4CI	ACNGT	4 cut(s)	397, 429, 1007, 1077
BstACI	GRCGYC	2 cut(s)	106, 461
BstDEI	CTNAG	5 cut(s)	168, 225, 471, 512, 633
BstDSI	CCRYGG	1 cut(s)	688
BstF5I	GGATG	3 cut(s)	281, 562, 628
BstFNI	CGCG	1 cut(s)	969
BstH2I	RGCGCY	2 cut(s)	464, 1027
BstHHI	GCGC	2 cut(s)	463, 1026
BstKTI	GATC	7 cut(s)	70, 115, 136, 238, 278, 642, 739
BstMAI	GTCTC	3 cut(s)	113, 568, 1076
BstMBI	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
BstMWI	GCNNNNNNNGC	6 cut(s)	59, 467, 476, 485, 790, 799
BstNI	CCWGG	2 cut(s)	847, 936
BstNSI	RCATGY	1 cut(s)	1069
BstSCI	CCNGG	4 cut(s)	444, 463, 845, 934
BstSFI	CTRYAG	2 cut(s)	1006, 1019
BstSLI	GKGCMC	1 cut(s)	82
BstUI	CGCG	1 cut(s)	969
BstV1I	GCAGC	5 cut(s)	289, 292, 377, 1005, 1033
BstX2I	RGATCY	2 cut(s)	275, 639
BstXI	CCANNNNNNTGG	2 cut(s)	596, 689
BstYI	RGATCY	2 cut(s)	275, 639
BsuRI	GGCC	1 cut(s)	205
BtgI	CCRYGG	1 cut(s)	688
BtrI	CACGTC	1 cut(s)	578
BtsCI	GGATG	3 cut(s)	281, 562, 628
BtsIMutI	CAGTG	3 cut(s)	393, 512, 1037
CaiI	CAGNNNCTG	2 cut(s)	185, 305
CfoI	GCGC	2 cut(s)	463, 1026
Cfr10I	RCCGGY	1 cut(s)	673
Cfr13I	GGNCC	3 cut(s)	203, 753, 849
CseI	GACGC	1 cut(s)	127
Csp6I	GTAC	1 cut(s)	310
CviAII	CATG	5 cut(s)	590, 596, 707, 740, 1066
CviQI	GTAC	1 cut(s)	310
DdeI	CTNAG	5 cut(s)	168, 225, 471, 512, 633
DinI	GGCGCC	1 cut(s)	462
DpnI	GATC	7 cut(s)	69, 114, 135, 237, 277, 641, 738
DpnII	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
DraIII	CACNNNGTG	1 cut(s)	1061
EciI	GGCGGA	1 cut(s)	726
Eco24I	GRGCYC	1 cut(s)	554
Eco47I	GGWCC	2 cut(s)	753, 849
Eco57I	CTGAAG	2 cut(s)	204, 365
EcoO109I	RGGNCCY	2 cut(s)	753, 849
EcoRII	CCWGG	2 cut(s)	845, 934
EcoT38I	GRGCYC	1 cut(s)	554
EgeI	GGCGCC	1 cut(s)	462
EheI	GGCGCC	1 cut(s)	462
Esp3I	CGTCTC	3 cut(s)	113, 568, 1076
FaeI	CATG	5 cut(s)	593, 599, 710, 743, 1069
FaqI	GGGAC	2 cut(s)	732, 739
FatI	CATG	5 cut(s)	589, 595, 706, 739, 1065
FauI	CCCGC	1 cut(s)	939
FbaI	TGATCA	1 cut(s)	736
FblI	GTMKAC	1 cut(s)	1009
Fnu4HI	GCNGC	7 cut(s)	303, 306, 391, 1019, 1022, 1027, 1089
FokI	GGATG	3 cut(s)	268, 569, 635
FriOI	GRGCYC	1 cut(s)	554
Fsp4HI	GCNGC	7 cut(s)	303, 306, 391, 1019, 1022, 1027, 1089
GlaI	GCGC	2 cut(s)	462, 1025
GluI	GCNGC	7 cut(s)	303, 306, 391, 1019, 1022, 1027, 1089
GsaI	CCCAGC	1 cut(s)	66
HaeII	RGCGCY	2 cut(s)	464, 1027
HaeIII	GGCC	1 cut(s)	205
HapII	CCGG	4 cut(s)	174, 446, 464, 674
HgaI	GACGC	1 cut(s)	127
HhaI	GCGC	2 cut(s)	463, 1026
Hin1I	GRCGYC	2 cut(s)	106, 461
Hin1II	CATG	5 cut(s)	593, 599, 710, 743, 1069
Hin6I	GCGC	2 cut(s)	461, 1024
HinP1I	GCGC	2 cut(s)	461, 1024
HincII	GTYRAC	3 cut(s)	267, 808, 909
HindII	GTYRAC	3 cut(s)	267, 808, 909
HindIII	AAGCTT	1 cut(s)	51
HinfI	GANTC	3 cut(s)	293, 693, 766
HpaII	CCGG	4 cut(s)	174, 446, 464, 674
HphI	GGTGA	3 cut(s)	288, 434, 746
Hpy166II	GTNNAC	7 cut(s)	267, 312, 442, 568, 808, 909, 1010
Hpy188I	TCNGA	8 cut(s)	117, 181, 235, 411, 556, 765, 826, 946
Hpy188III	TCNNGA	3 cut(s)	110, 521, 1046
Hpy8I	GTNNAC	7 cut(s)	267, 312, 442, 568, 808, 909, 1010
Hpy99I	CGWCG	4 cut(s)	108, 121, 134, 148
HpyAV	CCTTC	4 cut(s)	349, 406, 430, 490
HpyCH4III	ACNGT	4 cut(s)	397, 429, 1007, 1077
HpyCH4IV	ACGT	3 cut(s)	106, 577, 956
HpyCH4V	TGCA	4 cut(s)	393, 593, 1021, 1072
HpyF10VI	GCNNNNNNNGC	6 cut(s)	59, 467, 476, 485, 790, 799
HpyF3I	CTNAG	5 cut(s)	168, 225, 471, 512, 633
HpySE526I	ACGT	3 cut(s)	106, 577, 956
Hsp92I	GRCGYC	2 cut(s)	106, 461
Hsp92II	CATG	5 cut(s)	593, 599, 710, 743, 1069
HspAI	GCGC	2 cut(s)	461, 1024
KasI	GGCGCC	1 cut(s)	460
KflI	GGGWCCC	1 cut(s)	753
Ksp22I	TGATCA	1 cut(s)	736
Kzo9I	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
LmnI	GCTCC	4 cut(s)	319, 467, 826, 946
Lsp1109I	GCAGC	5 cut(s)	289, 292, 377, 1005, 1033
LweI	GCATC	3 cut(s)	10, 172, 619
MaeII	ACGT	3 cut(s)	106, 577, 956
MaeIII	GTNAC	2 cut(s)	952, 1061
MalI	GATC	7 cut(s)	69, 114, 135, 237, 277, 641, 738
MboI	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
MboII	GAAGA	7 cut(s)	270, 358, 361, 364, 413, 646, 813
MflI	RGATCY	2 cut(s)	275, 639
MhlI	GDGCHC	2 cut(s)	82, 554
MluCI	AATT	5 cut(s)	39, 86, 157, 771, 892
MluI	ACGCGT	1 cut(s)	967
Mly113I	GGCGCC	1 cut(s)	461
MlyI	GAGTC	1 cut(s)	760
MmeI	TCCRAC	1 cut(s)	140
MroXI	GAANNNNTTC	3 cut(s)	32, 405, 653
MseI	TTAA	4 cut(s)	483, 603, 891, 1093
MslI	CAYNNNNRTG	1 cut(s)	594
MspA1I	CMGCKG	1 cut(s)	302
MspI	CCGG	4 cut(s)	174, 446, 464, 674
MspR9I	CCNGG	4 cut(s)	446, 465, 847, 936
MvaI	CCWGG	2 cut(s)	847, 936
MvnI	CGCG	1 cut(s)	969
MwoI	GCNNNNNNNGC	6 cut(s)	59, 467, 476, 485, 790, 799
NarI	GGCGCC	1 cut(s)	461
NciI	CCSGG	2 cut(s)	446, 465
NdeII	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
NlaIII	CATG	5 cut(s)	593, 599, 710, 743, 1069
NlaIV	GGNNCC	5 cut(s)	462, 672, 754, 755, 828
NmuCI	GTSAC	2 cut(s)	952, 1061
NspI	RCATGY	1 cut(s)	1069
PciI	ACATGT	1 cut(s)	1065
PdmI	GAANNNNTTC	3 cut(s)	32, 405, 653
PfeI	GAWTC	2 cut(s)	293, 693
PkrI	GCNGC	7 cut(s)	304, 307, 392, 1020, 1023, 1028, 1090
PleI	GAGTC	1 cut(s)	760
PluTI	GGCGCC	1 cut(s)	464
PpsI	GAGTC	1 cut(s)	760
PpuMI	RGGWCCY	2 cut(s)	753, 849
PscI	ACATGT	1 cut(s)	1065
Psp5II	RGGWCCY	2 cut(s)	753, 849
Psp6I	CCWGG	2 cut(s)	845, 934
PspFI	CCCAGC	1 cut(s)	62
PspGI	CCWGG	2 cut(s)	845, 934
PspN4I	GGNNCC	5 cut(s)	462, 672, 754, 755, 828
PspPI	GGNCC	3 cut(s)	203, 753, 849
PspPPI	RGGWCCY	2 cut(s)	753, 849
PstI	CTGCAG	1 cut(s)	1023
PstNI	CAGNNNCTG	2 cut(s)	185, 305
PsuI	RGATCY	2 cut(s)	275, 639
PvuII	CAGCTG	1 cut(s)	302
RsaI	GTAC	1 cut(s)	311
RsaNI	GTAC	1 cut(s)	310
RseI	CAYNNNNRTG	1 cut(s)	594
SaqAI	TTAA	4 cut(s)	483, 603, 891, 1093
SatI	GCNGC	7 cut(s)	303, 306, 391, 1019, 1022, 1027, 1089
Sau3AI	GATC	7 cut(s)	67, 112, 133, 235, 275, 639, 736
Sau96I	GGNCC	3 cut(s)	203, 753, 849
SchI	GAGTC	1 cut(s)	760
ScrFI	CCNGG	4 cut(s)	446, 465, 847, 936
SduI	GDGCHC	2 cut(s)	82, 554
SfaNI	GCATC	3 cut(s)	10, 172, 619
SfcI	CTRYAG	2 cut(s)	1006, 1019
SfoI	GGCGCC	1 cut(s)	462
SinI	GGWCC	2 cut(s)	753, 849
SmiMI	CAYNNNNRTG	1 cut(s)	594
SmlI	CTYRAG	1 cut(s)	1013
SmoI	CTYRAG	1 cut(s)	1013
Sse9I	AATT	5 cut(s)	39, 86, 157, 771, 892
SsiI	CCGC	4 cut(s)	711, 868, 932, 1027
SspDI	GGCGCC	1 cut(s)	460
SspI	AATATT	1 cut(s)	991
StyD4I	CCNGG	4 cut(s)	444, 463, 845, 934
TaaI	ACNGT	4 cut(s)	397, 429, 1007, 1077
TaiI	ACGT	3 cut(s)	109, 580, 959
TaqI	TCGA	6 cut(s)	70, 103, 111, 129, 146, 494
TasI	AATT	5 cut(s)	39, 86, 157, 771, 892
TauI	GCSGC	1 cut(s)	1029
TfiI	GAWTC	2 cut(s)	293, 693
Tru1I	TTAA	4 cut(s)	483, 603, 891, 1093
Tru9I	TTAA	4 cut(s)	483, 603, 891, 1093
TscAI	CASTG	3 cut(s)	400, 512, 1037
TseFI	GTSAC	2 cut(s)	952, 1061
TseI	GCWGC	6 cut(s)	302, 305, 390, 1018, 1021, 1088
Tsp45I	GTSAC	2 cut(s)	952, 1061
TspDTI	ATGAA	2 cut(s)	270, 876
TspGWI	ACGGA	5 cut(s)	21, 252, 329, 677, 893
TspRI	CASTG	3 cut(s)	400, 512, 1037
VpaK11BI	GGWCC	2 cut(s)	753, 849
XapI	RAATTY	1 cut(s)	86
XceI	RCATGY	1 cut(s)	1069
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	3 cut(s)	32, 405, 653
ZraI	GACGTC	1 cut(s)	107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.