Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0013583

Physical Location & Seq

Genomic Coordinates Forward (+)

3216839 .. 3218479

Gene Structure 1641 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1039600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGGGCCGTACGGTTCCACCACCTGCTCAGGCGTCAGCAGCAGCGCGAGCTCCTCTTCTTCTTCCTCCGTCACCAAATCCCCAGCCGAAATCGATGGCTATTTGGCGGATGCGGGATACAAGGTCCGCTCCTCCGACCTACGACACGTCGCTCAGCGACTCGAACGCCTCGAAACCGTCATGGTCAACTCTCCCAGCGACCTCTCCCAGCTCGCCTCCGATGCCGTCCTCTACAACCCCTCCGACATCGCCACCTGGGTCGACTCCCTCCTCTCCGAGTTCAACCACCAGCCCCTCATGTCCCTCCCATCCGATCTCGACTTCCCCGACAGCGCCGTCATCAATAACCCCGCCGCCCTCTCCGGGGAAACATGGACCGACAATTCCTCCTTCGCCTCCGCCGTGCCGCAGCAGAACCACCAGCTCACCGTCGTCACCGCCATGGAGGAAGATTCGGGAATTAGGCTGGTTCACTTGCTCGTCACGTGCGCCGAATCCGTCCAGCGTGGCGAACTCGCATTGGCTGGCTCCCTGATCGAGAACATGCAGGCTCTGATGACACGTGTGAACACCAGCTGCGGCATCGGGAAGGTCGCTGGATACTTCATCGACGCCCTCAGCCGCCGAATCTTCTCGCCGCAGAGCGTCGGCTCGGCTGCCGGCTCGACACACGAGAACGAGCTGCTCTACCACTACTTCTACGAGGCCTGCCCCTATCTCAAATTCGCGCATTTCACAGCCAATCAGGCCATCCTGGAAGCATTCCACGGTCACGATTGTGTCCACGTCATCGACTTCAACTTAATGCACGGCTTACAATGGCCCGCGCTTATTCAGGCCCTTGCTCTCCGCCCCGGCGGGCCCCCCTTGCTTCGGTTGACCGGCATTGGACCGCCGTCCCCAGACGGCCGCGACTCGCTGAGAGAAATCGGGCTCCGACTTGCCGAGTTGGCCCGGTCCGTGAACGTCCGCTTCGCCTTCCGCGGCGTGGCAGCTTCGCGGCTCGAGGACGTGAAGCCGTGGATGCTCCAGGTGAGCCCGAAAGAGGCGGTGGCAGTGAATTCGATCATGCAGCTACACCGGCTTCTCGGATCTGACCCGAACCGGAATTCCCCAATCGAGATGATGCTGTCCTGGATCCGGAACCTCAACCCGAAGATAGTGACGGTTGTGGAGCAGGAAGCGGACCATAACAAACCTGGTTTCCTGGACCGGTTCACGGAAGCGCTGTACTACTACTCCACCATGTTCGACTCGCTGGAGGCTTGCCCGATGCAGCCGGAGAAGACGTTGGCGGAGATGTACATACAGAGGGAGATATGCAACGTTGTGTGCTGCGAGGGAGCGGCTCGAGTTGAGAGGCACGAACCGCTGAGCAAGTGGAGAACCCGGCTCGGTCAAGCCGGGTTCAGCCCGCTGCATTTGGGGTCGAATGCGTTTAAGCAGGCGAGCATGCTTCTTACTCTCTTCTCGGCTGAAGGGTACCGCGTGGAGGAGAATCAAGGCTGCCTCACTCTCGGTTGGCACAGCCGTCCTCTTATTGCGGCTTCGGCCTGGCAAGTAATGCCTGTGGCCGAAGCCACAATCAACCACCAAACGGTTGGGATTCTTAATCAGAATAATAATGCCAATCATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

547

Amino Acids

59.83

Weight (kDa)

5.63

Isoelectric Point (pI)

45.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	32 - 98	6.2e-31	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	156 - 520	2.5e-130	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013583)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04080
malus_domestica	MD02G1039600.v1.1 MD15G1180500.v1.1
prunus_persica	Prupe.7G236100_v2.0.a1
pyrus_communis	pycom02g03290 pycom15g16190
rosa_chinensis	RchiOBHm_Chr2g0089571
rosa_laevigata	RLG00000016041
rosa_multiflora	Rmu_co8325249.1_g000001 Rmu_co8349301.1_g000001 Rmu_sc0006193.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151810
rosa_rugosa	Rorug02G0001500
rosa_samantha	Rh2AG047000 Rh2BG045800 Rh2CG047600 Rh2DG047200
rosa_wichuraiana	Rw2G003570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	32
AasI	GACNNNNNNGTC	1 cut(s)	335
Acc36I	ACCTGC	1 cut(s)	32
Acc65I	GGTACC	1 cut(s)	1482
AccB1I	GGYRCC	1 cut(s)	1482
AccBSI	CCGCTC	2 cut(s)	129, 1346
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
AccIII	TCCGGA	1 cut(s)	1140
AclI	AACGTT	1 cut(s)	1326
AclWI	GGATC	3 cut(s)	1099, 1132, 1145
AcoI	YGGCCR	2 cut(s)	907, 1572
AcsI	RAATTY	3 cut(s)	722, 1060, 1108
AcuI	CTGAAG	1 cut(s)	1497
AcvI	CACGTG	2 cut(s)	486, 563
AcyI	GRCGYC	2 cut(s)	33, 612
AfaI	GTAC	4 cut(s)	11, 1232, 1304, 1484
AfeI	AGCGCT	1 cut(s)	1227
AfiI	CCNNNNNNNGG	9 cut(s)	363, 364, 873, 988, 1045, 1140, 1219, 1492, 1597
AflIII	ACRYGT	3 cut(s)	145, 560, 562
AgeI	ACCGGT	1 cut(s)	1212
AgsI	TTSAA	2 cut(s)	283, 799
AjiI	CACGTC	3 cut(s)	148, 787, 1012
AjnI	CCWGG	7 cut(s)	254, 753, 1029, 1133, 1198, 1206, 1553
AleI	CACNNNNGTG	1 cut(s)	777
AloI	GAACNNNNNNTCC	2 cut(s)	1094, 1126
AluBI	AGCT	7 cut(s)	51, 211, 424, 576, 682, 995, 1075
AluI	AGCT	7 cut(s)	51, 211, 424, 576, 682, 995, 1075
Alw21I	GWGCWC	1 cut(s)	53
AlwI	GGATC	3 cut(s)	1099, 1132, 1145
AlwNI	CAGNNNCTG	1 cut(s)	553
Ama87I	CYCGRG	2 cut(s)	1004, 1350
Aor13HI	TCCGGA	1 cut(s)	1140
Aor51HI	AGCGCT	1 cut(s)	1227
ApaI	GGGCCC	1 cut(s)	864
ApoI	RAATTY	3 cut(s)	722, 1060, 1108
AsiGI	ACCGGT	1 cut(s)	1212
Asp718I	GGTACC	1 cut(s)	1482
AspLEI	GCGC	6 cut(s)	47, 335, 491, 730, 829, 1228
AsuC2I	CCSGG	5 cut(s)	364, 855, 955, 1390, 1405
AsuHPI	GGTGA	4 cut(s)	64, 418, 427, 1045
AvaI	CYCGRG	2 cut(s)	1004, 1350
AvaII	GGWCC	6 cut(s)	124, 375, 890, 957, 1186, 1210
BaeGI	GKGCMC	1 cut(s)	864
BamHI	GGATCC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	1482
BanII	GRGCYC	4 cut(s)	53, 864, 936, 1040
BauI	CACGAG	1 cut(s)	671
BbrPI	CACGTG	2 cut(s)	486, 563
BbsI	GAAGAC	1 cut(s)	1292
Bbv12I	GWGCWC	1 cut(s)	53
BbvCI	CCTCAGC	1 cut(s)	617
BccI	CCATC	3 cut(s)	89, 316, 758
BceAI	ACGGC	8 cut(s)	209, 320, 386, 826, 880, 922, 1003, 1515
BcgI	CGANNNNNNTGC	2 cut(s)	1044, 1078
BciT130I	CCWGG	7 cut(s)	256, 755, 1031, 1135, 1200, 1208, 1555
BciVI	GTATCC	2 cut(s)	110, 593
BcnI	CCSGG	5 cut(s)	364, 855, 955, 1390, 1405
BfoI	RGCGCY	2 cut(s)	336, 1229
BfuAI	ACCTGC	1 cut(s)	32
BfuI	GTATCC	2 cut(s)	110, 593
BglI	GCCNNNNNGGC	2 cut(s)	746, 950
BlpI	GCTNAGC	2 cut(s)	153, 1373
Bme18I	GGWCC	6 cut(s)	124, 375, 890, 957, 1186, 1210
BmeT110I	CYCGRG	2 cut(s)	1004, 1350
BmgBI	CACGTC	3 cut(s)	148, 787, 1012
BmiI	GGNNCC	9 cut(s)	6, 16, 529, 862, 863, 935, 1139, 1145, 1484
BmsI	GCATC	6 cut(s)	100, 211, 591, 1014, 1116, 1263
BoxI	GACNNNNGTC	1 cut(s)	895
BpiI	GAAGAC	1 cut(s)	1292
BpmI	CTGGAG	2 cut(s)	1013, 1280
Bpu10I	CCTNAGC	2 cut(s)	28, 617
Bpu1102I	GCTNAGC	2 cut(s)	153, 1373
BpuMI	CCSGG	5 cut(s)	364, 855, 955, 1390, 1405
Bsa29I	ATCGAT	1 cut(s)	93
BsaAI	YACGTR	2 cut(s)	486, 563
BsaHI	GRCGYC	2 cut(s)	33, 612
BsaJI	CCNNGG	7 cut(s)	255, 363, 441, 766, 853, 982, 1019
BsaWI	WCCGGW	3 cut(s)	1104, 1140, 1212
BsaXI	ACNNNNNCTCC	8 cut(s)	224, 254, 371, 401, 1223, 1253, 1274, 1304
Bsc4I	CCNNNNNNNGG	9 cut(s)	363, 364, 873, 988, 1045, 1140, 1219, 1492, 1597
Bse118I	RCCGGY	4 cut(s)	659, 881, 1080, 1212
BseAI	TCCGGA	1 cut(s)	1140
BseBI	CCWGG	7 cut(s)	256, 755, 1031, 1135, 1200, 1208, 1555
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	7 cut(s)	255, 363, 441, 766, 853, 982, 1019
BseGI	GGATG	4 cut(s)	115, 308, 750, 1029
BseLI	CCNNNNNNNGG	9 cut(s)	363, 364, 873, 988, 1045, 1140, 1219, 1492, 1597
BseMII	CTCAG	5 cut(s)	42, 167, 631, 911, 1364
BseRI	GAGGAG	4 cut(s)	43, 121, 260, 1508
BseSI	GKGCMC	1 cut(s)	864
BseX3I	CGGCCG	1 cut(s)	907
BseYI	CCCAGC	3 cut(s)	82, 194, 207
Bsh1236I	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
Bsh1285I	CGRYCG	1 cut(s)	910
BshNI	GGYRCC	1 cut(s)	1482
BshTI	ACCGGT	1 cut(s)	1212
BshVI	ATCGAT	1 cut(s)	93
BsiEI	CGRYCG	1 cut(s)	910
BsiHKAI	GWGCWC	1 cut(s)	53
BsiHKCI	CYCGRG	2 cut(s)	1004, 1350
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	2 cut(s)	286, 883
BslI	CCNNNNNNNGG	9 cut(s)	363, 364, 873, 988, 1045, 1140, 1219, 1492, 1597
BsmFI	GGGAC	2 cut(s)	286, 883
BsmI	GAATGC	2 cut(s)	761, 1438
BsoBI	CYCGRG	2 cut(s)	1004, 1350
Bsp120I	GGGCCC	1 cut(s)	860
Bsp1286I	GDGCHC	4 cut(s)	53, 864, 936, 1040
Bsp13I	TCCGGA	1 cut(s)	1140
Bsp1407I	TGTACA	1 cut(s)	1302
Bsp143I	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
Bsp1720I	GCTNAGC	2 cut(s)	153, 1373
Bsp19I	CCATGG	1 cut(s)	441
BspCNI	CTCAG	5 cut(s)	41, 166, 630, 912, 1365
BspDI	ATCGAT	1 cut(s)	93
BspEI	TCCGGA	1 cut(s)	1140
BspFNI	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
BspLI	GGNNCC	9 cut(s)	6, 16, 529, 862, 863, 935, 1139, 1145, 1484
BspMI	ACCTGC	1 cut(s)	32
BspPI	GGATC	3 cut(s)	1099, 1132, 1145
BspT107I	GGYRCC	1 cut(s)	1482
BsrBI	CCGCTC	2 cut(s)	129, 1346
BsrFI	RCCGGY	4 cut(s)	659, 881, 1080, 1212
BsrGI	TGTACA	1 cut(s)	1302
BssAI	RCCGGY	4 cut(s)	659, 881, 1080, 1212
BssECI	CCNNGG	7 cut(s)	255, 363, 441, 766, 853, 982, 1019
BssMI	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
BssNI	GRCGYC	2 cut(s)	33, 612
BssSI	CACGAG	1 cut(s)	671
BssT1I	CCWWGG	1 cut(s)	441
Bst2BI	CACGAG	1 cut(s)	671
Bst2UI	CCWGG	7 cut(s)	256, 755, 1031, 1135, 1200, 1208, 1555
Bst4CI	ACNGT	6 cut(s)	14, 178, 430, 770, 1168, 1600
Bst6I	CTCTTC	2 cut(s)	61, 1472
BstACI	GRCGYC	2 cut(s)	33, 612
BstAPI	GCANNNNNTGC	1 cut(s)	1564
BstAUI	TGTACA	1 cut(s)	1302
BstBAI	YACGTR	2 cut(s)	486, 563
BstDEI	CTNAG	5 cut(s)	28, 153, 617, 920, 1373
BstDSI	CCRYGG	4 cut(s)	441, 766, 982, 1019
BstF5I	GGATG	4 cut(s)	115, 308, 750, 1029
BstFNI	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
BstH2I	RGCGCY	2 cut(s)	336, 1229
BstHHI	GCGC	6 cut(s)	47, 335, 491, 730, 829, 1228
BstKTI	GATC	5 cut(s)	316, 537, 1068, 1094, 1140
BstMBI	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
BstMCI	CGRYCG	1 cut(s)	910
BstNI	CCWGG	7 cut(s)	256, 755, 1031, 1135, 1200, 1208, 1555
BstNSI	RCATGY	2 cut(s)	547, 1456
BstPAI	GACNNNNGTC	1 cut(s)	895
BstSLI	GKGCMC	1 cut(s)	864
BstUI	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
BstV2I	GAAGAC	1 cut(s)	1292
BstX2I	RGATCY	2 cut(s)	1091, 1137
BstXI	CCANNNNNNTGG	1 cut(s)	1601
BstYI	RGATCY	2 cut(s)	1091, 1137
BstZI	CGGCCG	1 cut(s)	907
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	2 cut(s)	110, 593
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	4 cut(s)	441, 766, 982, 1019
BtgZI	GCGATG	1 cut(s)	232
BtrI	CACGTC	3 cut(s)	148, 787, 1012
BtsCI	GGATG	4 cut(s)	115, 308, 750, 1029
BtsI	GCAGTG	1 cut(s)	1062
BtsIMutI	CAGTG	1 cut(s)	1062
BveI	ACCTGC	1 cut(s)	32
CaiI	CAGNNNCTG	1 cut(s)	553
CfoI	GCGC	6 cut(s)	47, 335, 491, 730, 829, 1228
Cfr10I	RCCGGY	4 cut(s)	659, 881, 1080, 1212
Cfr42I	CCGCGG	1 cut(s)	985
ClaI	ATCGAT	1 cut(s)	93
CpoI	CGGWCCG	1 cut(s)	957
CseI	GACGC	3 cut(s)	22, 620, 634
CsiI	ACCWGGT	1 cut(s)	1198
Csp6I	GTAC	4 cut(s)	10, 1231, 1303, 1483
CspAI	ACCGGT	1 cut(s)	1212
CspI	CGGWCCG	1 cut(s)	957
CviAII	CATG	9 cut(s)	181, 298, 372, 442, 544, 1069, 1246, 1453, 1634
CviQI	GTAC	4 cut(s)	10, 1231, 1303, 1483
DdeI	CTNAG	5 cut(s)	28, 153, 617, 920, 1373
DpnI	GATC	5 cut(s)	315, 536, 1067, 1093, 1139
DpnII	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
DrdI	GACNNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	2 cut(s)	907, 1572
EagI	CGGCCG	1 cut(s)	907
Eam1104I	CTCTTC	2 cut(s)	61, 1472
EarI	CTCTTC	2 cut(s)	61, 1472
EciI	GGCGGA	4 cut(s)	122, 388, 839, 1310
Ecl136II	GAGCTC	1 cut(s)	51
EclXI	CGGCCG	1 cut(s)	907
Eco130I	CCWWGG	1 cut(s)	441
Eco147I	AGGCCT	1 cut(s)	707
Eco24I	GRGCYC	4 cut(s)	53, 864, 936, 1040
Eco47I	GGWCC	6 cut(s)	124, 375, 890, 957, 1186, 1210
Eco47III	AGCGCT	1 cut(s)	1227
Eco52I	CGGCCG	1 cut(s)	907
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	1 cut(s)	1497
Eco72I	CACGTG	2 cut(s)	486, 563
Eco88I	CYCGRG	2 cut(s)	1004, 1350
EcoICRI	GAGCTC	1 cut(s)	51
EcoO109I	RGGNCCY	2 cut(s)	838, 861
EcoRI	GAATTC	2 cut(s)	1060, 1108
EcoRII	CCWGG	7 cut(s)	254, 753, 1029, 1133, 1198, 1206, 1553
EcoT14I	CCWWGG	1 cut(s)	441
EcoT38I	GRGCYC	4 cut(s)	53, 864, 936, 1040
ErhI	CCWWGG	1 cut(s)	441
FaeI	CATG	9 cut(s)	184, 301, 375, 445, 547, 1072, 1249, 1456, 1637
FaqI	GGGAC	2 cut(s)	286, 883
FatI	CATG	9 cut(s)	180, 297, 371, 441, 543, 1068, 1245, 1452, 1633
FauI	CCCGC	5 cut(s)	106, 358, 832, 851, 1422
FblI	GTMKAC	1 cut(s)	261
FokI	GGATG	4 cut(s)	122, 295, 737, 1036
FriOI	GRGCYC	4 cut(s)	53, 864, 936, 1040
GlaI	GCGC	6 cut(s)	46, 334, 490, 729, 828, 1227
GsaI	CCCAGC	3 cut(s)	86, 198, 211
GsuI	CTGGAG	2 cut(s)	1013, 1280
HaeII	RGCGCY	2 cut(s)	336, 1229
HgaI	GACGC	3 cut(s)	22, 620, 634
HhaI	GCGC	6 cut(s)	47, 335, 491, 730, 829, 1228
Hin1I	GRCGYC	2 cut(s)	33, 612
Hin1II	CATG	9 cut(s)	184, 301, 375, 445, 547, 1072, 1249, 1456, 1637
Hin6I	GCGC	6 cut(s)	45, 333, 489, 728, 827, 1226
HinP1I	GCGC	6 cut(s)	45, 333, 489, 728, 827, 1226
HincII	GTYRAC	3 cut(s)	187, 262, 879
HindII	GTYRAC	3 cut(s)	187, 262, 879
HinfI	GANTC	9 cut(s)	159, 263, 452, 494, 627, 914, 1253, 1498, 1606
HphI	GGTGA	4 cut(s)	64, 418, 427, 1045
Hpy166II	GTNNAC	8 cut(s)	187, 262, 472, 568, 784, 879, 964, 1218
Hpy188III	TCNNGA	7 cut(s)	317, 456, 538, 586, 773, 1120, 1141
Hpy8I	GTNNAC	8 cut(s)	187, 262, 472, 568, 784, 879, 964, 1218
Hpy99I	CGWCG	4 cut(s)	152, 434, 614, 650
HpyAV	CCTTC	4 cut(s)	400, 583, 988, 1472
HpyCH4III	ACNGT	6 cut(s)	14, 178, 430, 770, 1168, 1600
HpyCH4IV	ACGT	8 cut(s)	147, 485, 562, 786, 966, 1011, 1289, 1326
HpyCH4V	TGCA	6 cut(s)	547, 808, 1072, 1276, 1323, 1420
HpyF3I	CTNAG	5 cut(s)	28, 153, 617, 920, 1373
HpySE526I	ACGT	8 cut(s)	147, 485, 562, 786, 966, 1011, 1289, 1326
Hsp92I	GRCGYC	2 cut(s)	33, 612
Hsp92II	CATG	9 cut(s)	184, 301, 375, 445, 547, 1072, 1249, 1456, 1637
HspAI	GCGC	6 cut(s)	45, 333, 489, 728, 827, 1226
Kpn2I	TCCGGA	1 cut(s)	1140
KpnI	GGTACC	1 cut(s)	1486
KroI	GCCGGC	1 cut(s)	659
KroNI	GCCGGC	1 cut(s)	661
KspI	CCGCGG	1 cut(s)	985
Kzo9I	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
LmnI	GCTCC	7 cut(s)	56, 134, 533, 939, 1032, 1174, 1343
LweI	GCATC	6 cut(s)	100, 211, 591, 1014, 1116, 1263
MabI	ACCWGGT	1 cut(s)	1198
MaeII	ACGT	8 cut(s)	147, 485, 562, 786, 966, 1011, 1289, 1326
MaeIII	GTNAC	5 cut(s)	70, 433, 481, 770, 1162
MalI	GATC	5 cut(s)	315, 536, 1067, 1093, 1139
MbiI	CCGCTC	2 cut(s)	129, 1346
MboI	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
MboII	GAAGA	8 cut(s)	48, 51, 54, 461, 622, 1168, 1297, 1459
MflI	RGATCY	2 cut(s)	1091, 1137
MhlI	GDGCHC	4 cut(s)	53, 864, 936, 1040
MluCI	AATT	5 cut(s)	382, 459, 722, 1060, 1108
MlyI	GAGTC	4 cut(s)	153, 257, 908, 1247
MmeI	TCCRAC	3 cut(s)	159, 267, 961
MroI	TCCGGA	1 cut(s)	1140
MroNI	GCCGGC	1 cut(s)	659
MseI	TTAA	3 cut(s)	803, 1440, 1611
MslI	CAYNNNNRTG	2 cut(s)	440, 777
MspA1I	CMGCKG	4 cut(s)	576, 984, 1372, 1417
Mva1269I	GAATGC	2 cut(s)	761, 1438
MvaI	CCWGG	7 cut(s)	256, 755, 1031, 1135, 1200, 1208, 1555
MvnI	CGCG	7 cut(s)	47, 728, 827, 912, 984, 1000, 1488
NaeI	GCCGGC	1 cut(s)	661
NciI	CCSGG	5 cut(s)	364, 855, 955, 1390, 1405
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
NgoMIV	GCCGGC	1 cut(s)	659
NlaIII	CATG	9 cut(s)	184, 301, 375, 445, 547, 1072, 1249, 1456, 1637
NlaIV	GGNNCC	9 cut(s)	6, 16, 529, 862, 863, 935, 1139, 1145, 1484
NmeAIII	GCCGAG	3 cut(s)	632, 970, 1451
NmuCI	GTSAC	5 cut(s)	70, 433, 481, 770, 1162
NspI	RCATGY	2 cut(s)	547, 1456
OliI	CACNNNNGTG	1 cut(s)	777
PaeI	GCATGC	1 cut(s)	1456
PaeR7I	CTCGAG	2 cut(s)	1004, 1350
PaqCI	CACCTGC	1 cut(s)	32
PceI	AGGCCT	1 cut(s)	707
PcsI	WCGNNNNNNNCGW	3 cut(s)	168, 324, 399
PctI	GAATGC	2 cut(s)	761, 1438
PdiI	GCCGGC	1 cut(s)	661
PfeI	GAWTC	5 cut(s)	452, 494, 627, 1498, 1606
Pfl23II	CGTACG	1 cut(s)	9
PfoI	TCCNGGA	3 cut(s)	753, 1133, 1206
PinAI	ACCGGT	1 cut(s)	1212
PleI	GAGTC	4 cut(s)	153, 257, 908, 1247
PmaCI	CACGTG	2 cut(s)	486, 563
PmlI	CACGTG	2 cut(s)	486, 563
PpsI	GAGTC	4 cut(s)	153, 257, 908, 1247
Ppu21I	YACGTR	2 cut(s)	486, 563
PshAI	GACNNNNGTC	1 cut(s)	895
Psp124BI	GAGCTC	1 cut(s)	53
Psp1406I	AACGTT	1 cut(s)	1326
Psp6I	CCWGG	7 cut(s)	254, 753, 1029, 1133, 1198, 1206, 1553
PspCI	CACGTG	2 cut(s)	486, 563
PspFI	CCCAGC	3 cut(s)	82, 194, 207
PspGI	CCWGG	7 cut(s)	254, 753, 1029, 1133, 1198, 1206, 1553
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	9 cut(s)	6, 16, 529, 862, 863, 935, 1139, 1145, 1484
PspOMI	GGGCCC	1 cut(s)	860
PspXI	VCTCGAGB	2 cut(s)	1004, 1350
PstNI	CAGNNNCTG	1 cut(s)	553
PsuI	RGATCY	2 cut(s)	1091, 1137
PvuII	CAGCTG	1 cut(s)	576
RsaI	GTAC	4 cut(s)	11, 1232, 1304, 1484
RsaNI	GTAC	4 cut(s)	10, 1231, 1303, 1483
RseI	CAYNNNNRTG	2 cut(s)	440, 777
Rsr2I	CGGWCCG	1 cut(s)	957
RsrII	CGGWCCG	1 cut(s)	957
SacI	GAGCTC	1 cut(s)	53
SacII	CCGCGG	1 cut(s)	985
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	3 cut(s)	803, 1440, 1611
Sau3AI	GATC	5 cut(s)	313, 534, 1065, 1091, 1137
SchI	GAGTC	4 cut(s)	153, 257, 908, 1247
SduI	GDGCHC	4 cut(s)	53, 864, 936, 1040
SexAI	ACCWGGT	1 cut(s)	1198
SfaNI	GCATC	6 cut(s)	100, 211, 591, 1014, 1116, 1263
Sfr274I	CTCGAG	2 cut(s)	1004, 1350
Sfr303I	CCGCGG	1 cut(s)	985
SgrBI	CCGCGG	1 cut(s)	985
SinI	GGWCC	6 cut(s)	124, 375, 890, 957, 1186, 1210
SlaI	CTCGAG	2 cut(s)	1004, 1350
SmiMI	CAYNNNNRTG	2 cut(s)	440, 777
SmlI	CTYRAG	2 cut(s)	1004, 1350
SmoI	CTYRAG	2 cut(s)	1004, 1350
SphI	GCATGC	1 cut(s)	1456
Sse9I	AATT	5 cut(s)	382, 459, 722, 1060, 1108
SseBI	AGGCCT	1 cut(s)	707
SstI	GAGCTC	1 cut(s)	53
StuI	AGGCCT	1 cut(s)	707
StyI	CCWWGG	1 cut(s)	441
TaaI	ACNGT	6 cut(s)	14, 178, 430, 770, 1168, 1600
TaiI	ACGT	8 cut(s)	150, 488, 565, 789, 969, 1014, 1292, 1329
TaqII	GACCGA	2 cut(s)	392, 1385
TasI	AATT	5 cut(s)	382, 459, 722, 1060, 1108
TatI	WGTACW	2 cut(s)	1230, 1302
TfiI	GAWTC	5 cut(s)	452, 494, 627, 1498, 1606
Tru1I	TTAA	3 cut(s)	803, 1440, 1611
Tru9I	TTAA	3 cut(s)	803, 1440, 1611
TscAI	CASTG	1 cut(s)	1062
TseFI	GTSAC	5 cut(s)	70, 433, 481, 770, 1162
Tsp45I	GTSAC	5 cut(s)	70, 433, 481, 770, 1162
TspDTI	ATGAA	1 cut(s)	595
TspGWI	ACGGA	4 cut(s)	58, 487, 949, 1235
TspRI	CASTG	1 cut(s)	1062
VpaK11BI	GGWCC	6 cut(s)	124, 375, 890, 957, 1186, 1210
XapI	RAATTY	3 cut(s)	722, 1060, 1108
XceI	RCATGY	2 cut(s)	547, 1456
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1196, 1598
XhoI	CTCGAG	2 cut(s)	1004, 1350
XmiI	GTMKAC	1 cut(s)	261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.