Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013583

Physical Location & Seq

Genomic Coordinates Forward (+)

3726142 .. 3728350

Gene Structure 2209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46487

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGAGCCGTACGGCAATTCCGGTGGCGTCAGCAGCAGCGCCAGCTCCTCTTCCTCCTCCTCCGCCGCCTCCATAACCAAGCCGCATGAGATGGACGGGTATTTGGCCGAGGCCGGGTACATGGTCCGCTCCTCCGACCTACGACACGTCGCTCAGCGCCTCGAGCGCTTGGAAAACGTCATGGTCAACTCCCCCAACGACCTCGCCCACTTCGCCTCCGACGCCGTCATCTACAACCCCTCCGACCTCGCCTCCTGGGTCGACTCCCTCCTCTCCGCCTCCGACCTCTCCATCTCCGATCTCGACTTCCCTGGCGTCATCATCAACAATCATCACACCGCTCTCCCCACCGCCGACACGTGGGCCGAAATTCCACCGATCTCCGCCGCGCCGCCGCAGAACCACCACCAGGTAACCGCCGTGATGGAGGAAGACTCCGGGATAAGGCTAGTGCAGCTGCTCGTCACGTGCGCCGAGTCCGTCCAGCGCGGCGATCTCGCATTGGCCGGCTCGATTATCGAGACCATGCGGGCGCTGCTCACACGTGTCAACACGGATTGCGGCATCGGAAAGGTCGCCGGCTACTTCATCGACGCCCTCAGCCGCCGCGTCTTCACCCCGCAGAGCGTCGGCTCCGACGGCGGCTCGGCTCACCAGAACGAGCTTCTCTACCACTACTTCTACGAAGCCTGCCCCTACCTCAAATTCGCGCATTTCACGGCGAACCAGGCGATCTTGGAGGCCTTCCACGGCCACGATTGCGTCCACGTCATCGACTTCAACTTAATGCACGGACTCCAATGGCCGGCGCTGATTCAGGCTCTGGCTTTACGGCCCGGTGGGCCCCCCTTGCTTCGGCTGACGGGCATTGGACCGCCGTCACCTGACGGCCGTGACTCGCTAAGAGAAATCGGGCTCCGGCTCGCGGAGCTGGCTCGCTCCGTTAACGTCCGTTTCGCTTTCCGCGGCGTGGCGGCTTCGCGTCTCGAGGACGTTAAGCCGTGGATGCTTCAGGTCAGTCCAAAGGAAGCCGTAGCTGTAAACTCGATCATGCAGCTCCATAGACTTCTCGGATCCGATTCGAACCGGAATTCTCCGATTGAAATGATGTTGGGATGGATCCGAAATCTTAACCCGAAGATTGTCACCGTCGTGGAGCAAGAAGCGGACCACAACAAGGCAGGGTTCTTGGAGCGGTTCACGGAGGCTCTTTACTACTACTCCAATATGTTCGACTCGCTCGAAGCTTGCGGCGCCATGCAGCCGGACAAGACCCTAGCGGAGATGTACATACAAAGAGAGATATGTAACGTGGTATGCTGCGAGGGACTGGCTCGCGTCGAGAGACACGAGCCGCTCTCTAAGTGGAGAACCCGGCTAGAACTAGCCGGATTCAGCCCGCTCCACTTGGGGTCGAATGCGTTCAAGCAGGCGAGTATGCTGCTGACGCTGTTCTCGGCGGAAGGTTATCGTGTGGAAGAGAAGGAAGGGTGTCTTACACTCGGCTGGCATAGCCGACCTCTGATTGCGGCTTCGGCTTGGCAGGTTATGCCTTTGCCTGAAGCAACCGCAACAGCGACTAACCCACTTGGGATTGTTAATCATAGTGCCAATCATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

540

Amino Acids

59.11

Weight (kDa)

5.64

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	32 - 93	2.4e-26	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	150 - 515	3.2e-128	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013583)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04080
malus_domestica	MD02G1039600.v1.1 MD15G1180500.v1.1
prunus_persica	Prupe.7G236100_v2.0.a1
pyrus_communis	pycom02g03290 pycom15g16190
rosa_chinensis	RchiOBHm_Chr2g0089571
rosa_laevigata	RLG00000016041
rosa_multiflora	Rmu_co8325249.1_g000001 Rmu_co8349301.1_g000001 Rmu_sc0006193.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151810
rosa_rugosa	Rorug02G0001500
rosa_samantha	Rh2AG047000 Rh2BG045800 Rh2CG047600 Rh2DG047200
rosa_wichuraiana	Rw2G003570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1534
AccB1I	GGYRCC	1 cut(s)	1253
AccBSI	CCGCTC	5 cut(s)	129, 341, 1195, 1357, 1402
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
AclWI	GGATC	4 cut(s)	1068, 1081, 1114, 1127
AcoI	YGGCCR	5 cut(s)	105, 504, 751, 803, 889
AcsI	RAATTY	3 cut(s)	369, 704, 1090
AcuI	CTGAAG	2 cut(s)	995, 1581
AcvI	CACGTG	3 cut(s)	360, 468, 545
AcyI	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
AfaI	GTAC	3 cut(s)	11, 119, 1289
AfeI	AGCGCT	1 cut(s)	167
AfiI	CCNNNNNNNGG	9 cut(s)	114, 360, 409, 444, 805, 855, 925, 970, 1177
AflIII	ACRYGT	4 cut(s)	145, 357, 542, 544
AgsI	TTSAA	3 cut(s)	781, 1103, 1426
AjiI	CACGTC	2 cut(s)	148, 769
AjnI	CCWGG	4 cut(s)	254, 310, 408, 726
AleI	CACNNNNGTG	1 cut(s)	1151
AluBI	AGCT	7 cut(s)	45, 457, 664, 931, 1037, 1057, 1247
AluI	AGCT	7 cut(s)	45, 457, 664, 931, 1037, 1057, 1247
Alw26I	GTCTC	3 cut(s)	515, 989, 1339
AlwI	GGATC	4 cut(s)	1068, 1081, 1114, 1127
AlwNI	CAGNNNCTG	1 cut(s)	823
Ama87I	CYCGRG	2 cut(s)	161, 986
Aor51HI	AGCGCT	1 cut(s)	167
ApaI	GGGCCC	1 cut(s)	846
ApeKI	GCWGC	9 cut(s)	33, 36, 454, 457, 535, 1054, 1261, 1320, 1441
ApoI	RAATTY	3 cut(s)	369, 704, 1090
Asp700I	GAANNNNTTC	1 cut(s)	1421
AspS9I	GGNCC	7 cut(s)	124, 363, 834, 842, 843, 872, 1168
AsuC2I	CCSGG	4 cut(s)	115, 439, 837, 1375
AsuHPI	GGTGA	4 cut(s)	607, 644, 873, 1138
AsuII	TTCGAA	1 cut(s)	1082
AvaI	CYCGRG	2 cut(s)	161, 986
AvaII	GGWCC	3 cut(s)	124, 872, 1168
BaeGI	GKGCMC	1 cut(s)	846
BamHI	GGATCC	2 cut(s)	1073, 1119
BanI	GGYRCC	1 cut(s)	1253
BanII	GRGCYC	2 cut(s)	846, 918
BauI	CACGAG	1 cut(s)	1349
BbrPI	CACGTG	3 cut(s)	360, 468, 545
BbsI	GAAGAC	2 cut(s)	438, 604
BbvCI	CCTCAGC	1 cut(s)	599
BbvI	GCAGC	9 cut(s)	45, 48, 444, 466, 522, 1066, 1273, 1307, 1428
BccI	CCATC	4 cut(s)	85, 299, 418, 1110
BcgI	CGANNNNNNTGC	2 cut(s)	1423, 1457
BciT130I	CCWGG	4 cut(s)	256, 312, 410, 728
BcnI	CCSGG	4 cut(s)	115, 439, 837, 1375
BcoDI	GTCTC	3 cut(s)	515, 989, 1339
BfaI	CTAG	4 cut(s)	449, 1277, 1379, 1385
BfoI	RGCGCY	6 cut(s)	42, 160, 169, 536, 812, 1257
BfuAI	ACCTGC	1 cut(s)	1534
BglI	GCCNNNNNGGC	1 cut(s)	841
BlpI	GCTNAGC	1 cut(s)	153
Bme1390I	CCNGG	8 cut(s)	115, 256, 312, 410, 439, 728, 837, 1375
Bme18I	GGWCC	3 cut(s)	124, 872, 1168
BmeT110I	CYCGRG	2 cut(s)	161, 986
BmgBI	CACGTC	2 cut(s)	148, 769
BmgT120I	GGNCC	7 cut(s)	124, 363, 834, 842, 843, 872, 1168
BmiI	GGNNCC	8 cut(s)	6, 634, 844, 845, 917, 1075, 1121, 1255
BmrFI	CCNGG	8 cut(s)	115, 256, 312, 410, 439, 728, 837, 1375
BmsI	GCATC	2 cut(s)	573, 996
BoxI	GACNNNNGTC	1 cut(s)	877
BpiI	GAAGAC	2 cut(s)	438, 604
BplI	GAGNNNNNCTC	4 cut(s)	419, 451, 1343, 1375
Bpu10I	CCTNAGC	1 cut(s)	599
Bpu1102I	GCTNAGC	1 cut(s)	153
Bpu14I	TTCGAA	1 cut(s)	1082
BpuMI	CCSGG	4 cut(s)	115, 439, 837, 1375
BsaAI	YACGTR	3 cut(s)	360, 468, 545
BsaHI	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
BsaI	GGTCTC	1 cut(s)	515
BsaJI	CCNNGG	6 cut(s)	108, 255, 310, 748, 964, 1001
BsaWI	WCCGGW	2 cut(s)	20, 1086
BsaXI	ACNNNNNCTCC	8 cut(s)	200, 224, 230, 236, 254, 266, 1205, 1235
Bsc4I	CCNNNNNNNGG	9 cut(s)	114, 360, 409, 444, 805, 855, 925, 970, 1177
Bse118I	RCCGGY	3 cut(s)	506, 578, 805
Bse1I	ACTGG	1 cut(s)	1335
BseBI	CCWGG	4 cut(s)	256, 312, 410, 728
BseDI	CCNNGG	6 cut(s)	108, 255, 310, 748, 964, 1001
BseGI	GGATG	2 cut(s)	1011, 1121
BseLI	CCNNNNNNNGG	9 cut(s)	114, 360, 409, 444, 805, 855, 925, 970, 1177
BseMII	CTCAG	2 cut(s)	167, 613
BseNI	ACTGG	1 cut(s)	1335
BseRI	GAGGAG	5 cut(s)	37, 46, 49, 121, 260
BseSI	GKGCMC	1 cut(s)	846
BseX3I	CGGCCG	1 cut(s)	889
BseXI	GCAGC	9 cut(s)	45, 48, 444, 466, 522, 1066, 1273, 1307, 1428
BsgI	GTGCAG	1 cut(s)	473
Bsh1236I	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
Bsh1285I	CGRYCG	1 cut(s)	892
BshNI	GGYRCC	1 cut(s)	1253
BsiEI	CGRYCG	1 cut(s)	892
BsiHKCI	CYCGRG	2 cut(s)	161, 986
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	1 cut(s)	1341
BslI	CCNNNNNNNGG	9 cut(s)	114, 360, 409, 444, 805, 855, 925, 970, 1177
BsmAI	GTCTC	3 cut(s)	515, 989, 1339
BsmBI	CGTCTC	1 cut(s)	989
BsmFI	GGGAC	1 cut(s)	1341
BsmI	GAATGC	1 cut(s)	1423
Bso31I	GGTCTC	1 cut(s)	515
BsoBI	CYCGRG	2 cut(s)	161, 986
Bsp119I	TTCGAA	1 cut(s)	1082
Bsp120I	GGGCCC	1 cut(s)	842
Bsp1286I	GDGCHC	2 cut(s)	846, 918
Bsp1407I	TGTACA	1 cut(s)	1287
Bsp143I	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
Bsp1720I	GCTNAGC	1 cut(s)	153
BspCNI	CTCAG	2 cut(s)	166, 612
BspFNI	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
BspLI	GGNNCC	8 cut(s)	6, 634, 844, 845, 917, 1075, 1121, 1255
BspMI	ACCTGC	1 cut(s)	1534
BspPI	GGATC	4 cut(s)	1068, 1081, 1114, 1127
BspT104I	TTCGAA	1 cut(s)	1082
BspT107I	GGYRCC	1 cut(s)	1253
BspTNI	GGTCTC	1 cut(s)	515
BsrBI	CCGCTC	5 cut(s)	129, 341, 1195, 1357, 1402
BsrFI	RCCGGY	3 cut(s)	506, 578, 805
BsrGI	TGTACA	1 cut(s)	1287
BsrI	ACTGG	1 cut(s)	1335
BssAI	RCCGGY	3 cut(s)	506, 578, 805
BssECI	CCNNGG	6 cut(s)	108, 255, 310, 748, 964, 1001
BssMI	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
BssNI	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
BssSI	CACGAG	1 cut(s)	1349
Bst2BI	CACGAG	1 cut(s)	1349
Bst2UI	CCWGG	4 cut(s)	256, 312, 410, 728
Bst4CI	ACNGT	1 cut(s)	1150
Bst6I	CTCTTC	2 cut(s)	55, 1473
BstACI	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
BstAPI	GCANNNNNTGC	1 cut(s)	1549
BstAUI	TGTACA	1 cut(s)	1287
BstBAI	YACGTR	3 cut(s)	360, 468, 545
BstBI	TTCGAA	1 cut(s)	1082
BstDEI	CTNAG	4 cut(s)	153, 599, 902, 1362
BstDSI	CCRYGG	3 cut(s)	748, 964, 1001
BstEII	GGTNACC	1 cut(s)	412
BstF5I	GGATG	2 cut(s)	1011, 1121
BstFNI	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
BstH2I	RGCGCY	6 cut(s)	42, 160, 169, 536, 812, 1257
BstKTI	GATC	7 cut(s)	301, 381, 496, 735, 1050, 1076, 1122
BstMAI	GTCTC	3 cut(s)	515, 989, 1339
BstMBI	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
BstMCI	CGRYCG	1 cut(s)	892
BstNI	CCWGG	4 cut(s)	256, 312, 410, 728
BstPAI	GACNNNNGTC	1 cut(s)	877
BstPI	GGTNACC	1 cut(s)	412
BstSCI	CCNGG	8 cut(s)	113, 254, 310, 408, 437, 726, 835, 1373
BstSLI	GKGCMC	1 cut(s)	846
BstUI	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
BstV1I	GCAGC	9 cut(s)	45, 48, 444, 466, 522, 1066, 1273, 1307, 1428
BstV2I	GAAGAC	2 cut(s)	438, 604
BstX2I	RGATCY	2 cut(s)	1073, 1119
BstYI	RGATCY	2 cut(s)	1073, 1119
BstZI	CGGCCG	1 cut(s)	889
BtgI	CCRYGG	3 cut(s)	748, 964, 1001
BtrI	CACGTC	2 cut(s)	148, 769
BtsCI	GGATG	2 cut(s)	1011, 1121
BveI	ACCTGC	1 cut(s)	1534
CaiI	CAGNNNCTG	1 cut(s)	823
Cfr10I	RCCGGY	3 cut(s)	506, 578, 805
Cfr13I	GGNCC	7 cut(s)	124, 363, 834, 842, 843, 872, 1168
Cfr42I	CCGCGG	1 cut(s)	967
CsiI	ACCWGGT	1 cut(s)	408
Csp6I	GTAC	3 cut(s)	10, 118, 1288
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviAII	CATG	7 cut(s)	86, 121, 181, 526, 1051, 1258, 1616
CviQI	GTAC	3 cut(s)	10, 118, 1288
DdeI	CTNAG	4 cut(s)	153, 599, 902, 1362
DinI	GGCGCC	1 cut(s)	1255
DpnI	GATC	7 cut(s)	300, 380, 495, 734, 1049, 1075, 1121
DpnII	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
EaeI	YGGCCR	5 cut(s)	105, 504, 751, 803, 889
EagI	CGGCCG	1 cut(s)	889
Eam1104I	CTCTTC	2 cut(s)	55, 1473
EarI	CTCTTC	2 cut(s)	55, 1473
EciI	GGCGGA	4 cut(s)	52, 265, 373, 1475
EclXI	CGGCCG	1 cut(s)	889
Eco147I	AGGCCT	1 cut(s)	743
Eco24I	GRGCYC	2 cut(s)	846, 918
Eco31I	GGTCTC	1 cut(s)	515
Eco47I	GGWCC	3 cut(s)	124, 872, 1168
Eco47III	AGCGCT	1 cut(s)	167
Eco52I	CGGCCG	1 cut(s)	889
Eco57I	CTGAAG	2 cut(s)	995, 1581
Eco72I	CACGTG	3 cut(s)	360, 468, 545
Eco88I	CYCGRG	2 cut(s)	161, 986
Eco91I	GGTNACC	1 cut(s)	412
EcoO109I	RGGNCCY	1 cut(s)	843
EcoO65I	GGTNACC	1 cut(s)	412
EcoRI	GAATTC	1 cut(s)	1090
EcoRII	CCWGG	4 cut(s)	254, 310, 408, 726
EcoT38I	GRGCYC	2 cut(s)	846, 918
EgeI	GGCGCC	1 cut(s)	1255
EheI	GGCGCC	1 cut(s)	1255
Esp3I	CGTCTC	1 cut(s)	989
FaeI	CATG	7 cut(s)	89, 124, 184, 529, 1054, 1261, 1619
FalI	AAGNNNNNCTT	2 cut(s)	1479, 1511
FaqI	GGGAC	1 cut(s)	1341
FatI	CATG	7 cut(s)	85, 120, 180, 525, 1050, 1257, 1615
FauI	CCCGC	3 cut(s)	522, 627, 1407
FblI	GTMKAC	1 cut(s)	261
FokI	GGATG	2 cut(s)	1018, 1128
FriOI	GRGCYC	2 cut(s)	846, 918
FspBI	CTAG	4 cut(s)	449, 1277, 1379, 1385
HaeII	RGCGCY	6 cut(s)	42, 160, 169, 536, 812, 1257
Hin1I	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
Hin1II	CATG	7 cut(s)	89, 124, 184, 529, 1054, 1261, 1619
HincII	GTYRAC	4 cut(s)	187, 262, 550, 946
HindII	GTYRAC	4 cut(s)	187, 262, 550, 946
HindIII	AAGCTT	1 cut(s)	1245
HinfI	GANTC	9 cut(s)	263, 434, 476, 795, 814, 896, 1079, 1235, 1392
HpaI	GTTAAC	1 cut(s)	946
HphI	GGTGA	4 cut(s)	607, 644, 873, 1138
Hpy166II	GTNNAC	7 cut(s)	187, 262, 550, 766, 946, 1042, 1200
Hpy188III	TCNNGA	4 cut(s)	302, 520, 986, 1342
Hpy8I	GTNNAC	7 cut(s)	187, 262, 550, 766, 946, 1042, 1200
Hpy99I	CGWCG	7 cut(s)	152, 224, 596, 632, 641, 1154, 1343
HpyAV	CCTTC	4 cut(s)	754, 1457, 1477, 1481
HpyCH4III	ACNGT	1 cut(s)	1150
HpyCH4IV	ACGT	9 cut(s)	147, 177, 359, 467, 544, 768, 948, 993, 1311
HpyCH4V	TGCA	4 cut(s)	454, 790, 1054, 1261
HpyF3I	CTNAG	4 cut(s)	153, 599, 902, 1362
HpySE526I	ACGT	9 cut(s)	147, 177, 359, 467, 544, 768, 948, 993, 1311
Hsp92I	GRCGYC	5 cut(s)	27, 222, 315, 594, 1254
Hsp92II	CATG	7 cut(s)	89, 124, 184, 529, 1054, 1261, 1619
KasI	GGCGCC	1 cut(s)	1253
KroI	GCCGGC	3 cut(s)	506, 578, 805
KroNI	GCCGGC	3 cut(s)	508, 580, 807
KspAI	GTTAAC	1 cut(s)	946
KspI	CCGCGG	1 cut(s)	967
Kzo9I	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
Lsp1109I	GCAGC	9 cut(s)	45, 48, 444, 466, 522, 1066, 1273, 1307, 1428
LweI	GCATC	2 cut(s)	573, 996
MabI	ACCWGGT	1 cut(s)	408
MaeI	CTAG	4 cut(s)	449, 1277, 1379, 1385
MaeII	ACGT	9 cut(s)	147, 177, 359, 467, 544, 768, 948, 993, 1311
MaeIII	GTNAC	6 cut(s)	412, 463, 879, 893, 1144, 1307
MalI	GATC	7 cut(s)	300, 380, 495, 734, 1049, 1075, 1121
MbiI	CCGCTC	5 cut(s)	129, 341, 1195, 1357, 1402
MboI	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
MboII	GAAGA	5 cut(s)	42, 443, 604, 1150, 1490
MflI	RGATCY	2 cut(s)	1073, 1119
MhlI	GDGCHC	2 cut(s)	846, 918
MluCI	AATT	4 cut(s)	16, 369, 704, 1090
Mly113I	GGCGCC	1 cut(s)	1254
MlyI	GAGTC	6 cut(s)	257, 428, 485, 789, 890, 1229
MmeI	TCCRAC	5 cut(s)	159, 243, 267, 306, 660
MroNI	GCCGGC	3 cut(s)	506, 578, 805
MroXI	GAANNNNTTC	1 cut(s)	1421
MseI	TTAA	5 cut(s)	785, 945, 996, 1131, 1599
MslI	CAYNNNNRTG	1 cut(s)	1151
MspA1I	CMGCKG	2 cut(s)	457, 966
MspR9I	CCNGG	8 cut(s)	115, 256, 312, 410, 439, 728, 837, 1375
Mva1269I	GAATGC	1 cut(s)	1423
MvaI	CCWGG	4 cut(s)	256, 312, 410, 728
MvnI	CGCG	8 cut(s)	389, 489, 609, 710, 926, 966, 982, 1338
NaeI	GCCGGC	3 cut(s)	508, 580, 807
NarI	GGCGCC	1 cut(s)	1254
NciI	CCSGG	4 cut(s)	115, 439, 837, 1375
NdeII	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
NgoMIV	GCCGGC	3 cut(s)	506, 578, 805
NlaIII	CATG	7 cut(s)	89, 124, 184, 529, 1054, 1261, 1619
NlaIV	GGNNCC	8 cut(s)	6, 634, 844, 845, 917, 1075, 1121, 1255
NmeAIII	GCCGAG	5 cut(s)	133, 499, 626, 1436, 1482
NmuCI	GTSAC	4 cut(s)	463, 879, 893, 1144
NspV	TTCGAA	1 cut(s)	1082
OliI	CACNNNNGTG	1 cut(s)	1151
PaeR7I	CTCGAG	2 cut(s)	161, 986
PceI	AGGCCT	1 cut(s)	743
PcsI	WCGNNNNNNNCGW	2 cut(s)	1239, 1347
PctI	GAATGC	1 cut(s)	1423
PdiI	GCCGGC	3 cut(s)	508, 580, 807
PdmI	GAANNNNTTC	1 cut(s)	1421
PfeI	GAWTC	3 cut(s)	814, 1079, 1392
Pfl23II	CGTACG	1 cut(s)	9
PflFI	GACNNNGTC	1 cut(s)	224
PfoI	TCCNGGA	1 cut(s)	437
PleI	GAGTC	6 cut(s)	257, 428, 484, 789, 890, 1229
PluTI	GGCGCC	1 cut(s)	1257
PmaCI	CACGTG	3 cut(s)	360, 468, 545
PmlI	CACGTG	3 cut(s)	360, 468, 545
PpsI	GAGTC	6 cut(s)	257, 428, 484, 789, 890, 1229
Ppu21I	YACGTR	3 cut(s)	360, 468, 545
PshAI	GACNNNNGTC	1 cut(s)	877
Psp6I	CCWGG	4 cut(s)	254, 310, 408, 726
PspCI	CACGTG	3 cut(s)	360, 468, 545
PspEI	GGTNACC	1 cut(s)	412
PspGI	CCWGG	4 cut(s)	254, 310, 408, 726
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	8 cut(s)	6, 634, 844, 845, 917, 1075, 1121, 1255
PspOMI	GGGCCC	1 cut(s)	842
PspPI	GGNCC	7 cut(s)	124, 363, 834, 842, 843, 872, 1168
PspXI	VCTCGAGB	1 cut(s)	161
PstNI	CAGNNNCTG	1 cut(s)	823
PsuI	RGATCY	2 cut(s)	1073, 1119
PsyI	GACNNNGTC	1 cut(s)	224
PvuII	CAGCTG	1 cut(s)	457
RsaI	GTAC	3 cut(s)	11, 119, 1289
RsaNI	GTAC	3 cut(s)	10, 118, 1288
RseI	CAYNNNNRTG	1 cut(s)	1151
SacII	CCGCGG	1 cut(s)	967
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	5 cut(s)	785, 945, 996, 1131, 1599
Sau3AI	GATC	7 cut(s)	298, 378, 493, 732, 1047, 1073, 1119
Sau96I	GGNCC	7 cut(s)	124, 363, 834, 842, 843, 872, 1168
SchI	GAGTC	6 cut(s)	257, 428, 485, 789, 890, 1229
ScrFI	CCNGG	8 cut(s)	115, 256, 312, 410, 439, 728, 837, 1375
SduI	GDGCHC	2 cut(s)	846, 918
SexAI	ACCWGGT	1 cut(s)	408
SfaNI	GCATC	2 cut(s)	573, 996
SfiI	GGCCNNNNNGGCC	1 cut(s)	841
SfoI	GGCGCC	1 cut(s)	1255
Sfr274I	CTCGAG	2 cut(s)	161, 986
Sfr303I	CCGCGG	1 cut(s)	967
SfuI	TTCGAA	1 cut(s)	1082
SgrBI	CCGCGG	1 cut(s)	967
SinI	GGWCC	3 cut(s)	124, 872, 1168
SlaI	CTCGAG	2 cut(s)	161, 986
SmiMI	CAYNNNNRTG	1 cut(s)	1151
SmlI	CTYRAG	2 cut(s)	161, 986
SmoI	CTYRAG	2 cut(s)	161, 986
Sse9I	AATT	4 cut(s)	16, 369, 704, 1090
SseBI	AGGCCT	1 cut(s)	743
SspDI	GGCGCC	1 cut(s)	1253
SspMI	CTAG	4 cut(s)	449, 1277, 1379, 1385
StuI	AGGCCT	1 cut(s)	743
StyD4I	CCNGG	8 cut(s)	113, 254, 310, 408, 437, 726, 835, 1373
TaaI	ACNGT	1 cut(s)	1150
TaiI	ACGT	9 cut(s)	150, 180, 362, 470, 547, 771, 951, 996, 1314
TasI	AATT	4 cut(s)	16, 369, 704, 1090
TatI	WGTACW	1 cut(s)	1287
TfiI	GAWTC	3 cut(s)	814, 1079, 1392
Tru1I	TTAA	5 cut(s)	785, 945, 996, 1131, 1599
Tru9I	TTAA	5 cut(s)	785, 945, 996, 1131, 1599
TseFI	GTSAC	4 cut(s)	463, 879, 893, 1144
TseI	GCWGC	9 cut(s)	33, 36, 454, 457, 535, 1054, 1261, 1320, 1441
Tsp45I	GTSAC	4 cut(s)	463, 879, 893, 1144
TspDTI	ATGAA	1 cut(s)	577
TspGWI	ACGGA	6 cut(s)	469, 569, 807, 931, 941, 1217
Tth111I	GACNNNGTC	1 cut(s)	224
VpaK11BI	GGWCC	3 cut(s)	124, 872, 1168
XapI	RAATTY	3 cut(s)	369, 704, 1090
XhoI	CTCGAG	2 cut(s)	161, 986
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	1421
XspI	CTAG	4 cut(s)	449, 1277, 1379, 1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.