Belongs to the GRAS family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g04080 |
| malus_domestica | MD02G1039600.v1.1 MD15G1180500.v1.1 |
| prunus_persica | Prupe.7G236100_v2.0.a1 |
| pyrus_communis | pycom02g03290 pycom15g16190 |
| rosa_chinensis | RchiOBHm_Chr2g0089571 |
| rosa_laevigata | RLG00000016041 |
| rosa_multiflora | Rmu_co8325249.1_g000001 Rmu_co8349301.1_g000001 Rmu_sc0006193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00151810 |
| rosa_rugosa | Rorug02G0001500 |
| rosa_samantha | Rh2AG047000 Rh2BG045800 Rh2CG047600 Rh2DG047200 |
| rosa_wichuraiana | Rw2G003570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 994 |
| Acc36I | ACCTGC | 1 cut(s) | 994 |
| AccB1I | GGYRCC | 1 cut(s) | 1479 |
| AccBSI | CCGCTC | 1 cut(s) | 129 |
| AccI | GTMKAC | 1 cut(s) | 261 |
| AccII | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| AccIII | TCCGGA | 1 cut(s) | 1113 |
| AclWI | GGATC | 4 cut(s) | 504, 1072, 1105, 1118 |
| AcoI | YGGCCR | 3 cut(s) | 105, 794, 915 |
| AcsI | RAATTY | 2 cut(s) | 695, 1081 |
| AcuI | CTGAAG | 2 cut(s) | 1470, 1569 |
| AcvI | CACGTG | 2 cut(s) | 471, 548 |
| AcyI | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| AfaI | GTAC | 2 cut(s) | 1205, 1277 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 447, 493, 853, 913, 1018, 1383, 1569 |
| AflIII | ACRYGT | 3 cut(s) | 145, 545, 547 |
| AgsI | TTSAA | 4 cut(s) | 18, 283, 772, 1414 |
| AjiI | CACGTC | 1 cut(s) | 760 |
| AjnI | CCWGG | 5 cut(s) | 254, 365, 726, 738, 813 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1067, 1099 |
| AluBI | AGCT | 6 cut(s) | 51, 211, 409, 561, 655, 1048 |
| AluI | AGCT | 6 cut(s) | 51, 211, 409, 561, 655, 1048 |
| Alw21I | GWGCWC | 1 cut(s) | 657 |
| Alw26I | GTCTC | 3 cut(s) | 167, 879, 1327 |
| AlwI | GGATC | 4 cut(s) | 504, 1072, 1105, 1118 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 538, 814 |
| Ama87I | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| Aor13HI | TCCGGA | 1 cut(s) | 1113 |
| ApaI | GGGCCC | 2 cut(s) | 9, 837 |
| ApoI | RAATTY | 2 cut(s) | 695, 1081 |
| AseI | ATTAAT | 1 cut(s) | 1584 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 378 |
| AspLEI | GCGC | 6 cut(s) | 47, 159, 168, 476, 1244, 1319 |
| AsuC2I | CCSGG | 4 cut(s) | 442, 828, 1174, 1378 |
| AsuHPI | GGTGA | 4 cut(s) | 64, 403, 700, 1018 |
| AvaI | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| AvaII | GGWCC | 8 cut(s) | 124, 349, 369, 863, 930, 1069, 1159, 1183 |
| BaeGI | GKGCMC | 2 cut(s) | 9, 837 |
| BamHI | GGATCC | 1 cut(s) | 1110 |
| BanI | GGYRCC | 1 cut(s) | 1479 |
| BanII | GRGCYC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| BbrPI | CACGTG | 2 cut(s) | 471, 548 |
| Bbv12I | GWGCWC | 1 cut(s) | 657 |
| BbvCI | CCTCAGC | 2 cut(s) | 390, 602 |
| BccI | CCATC | 4 cut(s) | 89, 316, 341, 731 |
| BceAI | ACGGC | 6 cut(s) | 209, 438, 799, 976, 1488, 1560 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1034, 1068 |
| BciT130I | CCWGG | 5 cut(s) | 256, 367, 728, 740, 815 |
| BciVI | GTATCC | 1 cut(s) | 1448 |
| BcnI | CCSGG | 4 cut(s) | 442, 828, 1174, 1378 |
| BcoDI | GTCTC | 3 cut(s) | 167, 879, 1327 |
| BfmI | CTRYAG | 1 cut(s) | 1001 |
| BfoI | RGCGCY | 3 cut(s) | 48, 160, 169 |
| BfuAI | ACCTGC | 1 cut(s) | 994 |
| BfuI | GTATCC | 1 cut(s) | 1448 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 719, 880, 923 |
| BlpI | GCTNAGC | 1 cut(s) | 153 |
| Bme1390I | CCNGG | 9 cut(s) | 256, 367, 442, 728, 740, 815, 828, 1174, 1378 |
| Bme18I | GGWCC | 8 cut(s) | 124, 349, 369, 863, 930, 1069, 1159, 1183 |
| BmeT110I | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| BmgBI | CACGTC | 1 cut(s) | 760 |
| BmiI | GGNNCC | 9 cut(s) | 6, 7, 835, 836, 1071, 1112, 1118, 1402, 1481 |
| BmrFI | CCNGG | 9 cut(s) | 256, 367, 442, 728, 740, 815, 828, 1174, 1378 |
| BmsI | GCATC | 6 cut(s) | 319, 576, 987, 1060, 1089, 1236 |
| Bpu10I | CCTNAGC | 2 cut(s) | 390, 602 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 153 |
| BpuMI | CCSGG | 4 cut(s) | 442, 828, 1174, 1378 |
| Bsa29I | ATCGAT | 1 cut(s) | 93 |
| BsaAI | YACGTR | 2 cut(s) | 471, 548 |
| BsaHI | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 7 cut(s) | 255, 636, 739, 813, 826, 992, 1263 |
| BsaWI | WCCGGW | 2 cut(s) | 1077, 1113 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 224, 254 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 447, 493, 853, 913, 1018, 1383, 1569 |
| Bse118I | RCCGGY | 2 cut(s) | 113, 796 |
| Bse1I | ACTGG | 1 cut(s) | 918 |
| Bse3DI | GCAATG | 1 cut(s) | 797 |
| BseAI | TCCGGA | 1 cut(s) | 1113 |
| BseBI | CCWGG | 5 cut(s) | 256, 367, 728, 740, 815 |
| BseCI | ATCGAT | 1 cut(s) | 93 |
| BseDI | CCNNGG | 7 cut(s) | 255, 636, 739, 813, 826, 992, 1263 |
| BseGI | GGATG | 4 cut(s) | 308, 723, 988, 1002 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 447, 493, 853, 913, 1018, 1383, 1569 |
| BseMI | GCAATG | 1 cut(s) | 797 |
| BseMII | CTCAG | 5 cut(s) | 167, 404, 616, 884, 1185 |
| BseNI | ACTGG | 1 cut(s) | 918 |
| BseRI | GAGGAG | 5 cut(s) | 43, 55, 121, 260, 647 |
| BseSI | GKGCMC | 2 cut(s) | 9, 837 |
| BseYI | CCCAGC | 3 cut(s) | 207, 1102, 1366 |
| Bsh1236I | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| BshNI | GGYRCC | 1 cut(s) | 1479 |
| BshVI | ATCGAT | 1 cut(s) | 93 |
| BsiHKAI | GWGCWC | 1 cut(s) | 657 |
| BsiHKCI | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| BslFI | GGGAC | 1 cut(s) | 1383 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 447, 493, 853, 913, 1018, 1383, 1569 |
| BsmAI | GTCTC | 3 cut(s) | 167, 879, 1327 |
| BsmFI | GGGAC | 1 cut(s) | 1383 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| Bsp120I | GGGCCC | 2 cut(s) | 5, 833 |
| Bsp1286I | GDGCHC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| Bsp13I | TCCGGA | 1 cut(s) | 1113 |
| Bsp1407I | TGTACA | 1 cut(s) | 1275 |
| Bsp143I | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 153 |
| BspCNI | CTCAG | 5 cut(s) | 166, 403, 615, 885, 1186 |
| BspDI | ATCGAT | 1 cut(s) | 93 |
| BspEI | TCCGGA | 1 cut(s) | 1113 |
| BspFNI | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| BspLI | GGNNCC | 9 cut(s) | 6, 7, 835, 836, 1071, 1112, 1118, 1402, 1481 |
| BspMAI | CTGCAG | 1 cut(s) | 1005 |
| BspMI | ACCTGC | 1 cut(s) | 994 |
| BspPI | GGATC | 4 cut(s) | 504, 1072, 1105, 1118 |
| BspT107I | GGYRCC | 1 cut(s) | 1479 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| BsrBI | CCGCTC | 1 cut(s) | 129 |
| BsrDI | GCAATG | 1 cut(s) | 797 |
| BsrFI | RCCGGY | 2 cut(s) | 113, 796 |
| BsrGI | TGTACA | 1 cut(s) | 1275 |
| BsrI | ACTGG | 1 cut(s) | 918 |
| BssAI | RCCGGY | 2 cut(s) | 113, 796 |
| BssECI | CCNNGG | 7 cut(s) | 255, 636, 739, 813, 826, 992, 1263 |
| BssMI | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| BssNI | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| BssT1I | CCWWGG | 1 cut(s) | 1263 |
| Bst2UI | CCWGG | 5 cut(s) | 256, 367, 728, 740, 815 |
| Bst4CI | ACNGT | 5 cut(s) | 14, 22, 178, 415, 1141 |
| Bst6I | CTCTTC | 3 cut(s) | 61, 384, 1461 |
| BstACI | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 538, 787, 1537 |
| BstAUI | TGTACA | 1 cut(s) | 1275 |
| BstBAI | YACGTR | 2 cut(s) | 471, 548 |
| BstDEI | CTNAG | 5 cut(s) | 153, 390, 602, 893, 1194 |
| BstDSI | CCRYGG | 1 cut(s) | 992 |
| BstF5I | GGATG | 4 cut(s) | 308, 723, 988, 1002 |
| BstFNI | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| BstH2I | RGCGCY | 3 cut(s) | 48, 160, 169 |
| BstHHI | GCGC | 6 cut(s) | 47, 159, 168, 476, 1244, 1319 |
| BstKTI | GATC | 7 cut(s) | 93, 316, 499, 522, 1067, 1113, 1134 |
| BstMAI | GTCTC | 3 cut(s) | 167, 879, 1327 |
| BstMBI | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| BstNI | CCWGG | 5 cut(s) | 256, 367, 728, 740, 815 |
| BstNSI | RCATGY | 2 cut(s) | 149, 532 |
| BstSCI | CCNGG | 9 cut(s) | 254, 365, 440, 726, 738, 813, 826, 1172, 1376 |
| BstSFI | CTRYAG | 1 cut(s) | 1001 |
| BstSLI | GKGCMC | 2 cut(s) | 9, 837 |
| BstUI | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| BstX2I | RGATCY | 2 cut(s) | 496, 1110 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1574 |
| BstYI | RGATCY | 2 cut(s) | 496, 1110 |
| Bsu15I | ATCGAT | 1 cut(s) | 93 |
| BsuI | GTATCC | 1 cut(s) | 1448 |
| BsuTUI | ATCGAT | 1 cut(s) | 93 |
| BtgI | CCRYGG | 1 cut(s) | 992 |
| BtgZI | GCGATG | 2 cut(s) | 1259, 1498 |
| BtrI | CACGTC | 1 cut(s) | 760 |
| BtsCI | GGATG | 4 cut(s) | 308, 723, 988, 1002 |
| BtsI | GCAGTG | 1 cut(s) | 1035 |
| BtsIMutI | CAGTG | 2 cut(s) | 1035, 1191 |
| BveI | ACCTGC | 1 cut(s) | 994 |
| CaiI | CAGNNNCTG | 2 cut(s) | 538, 814 |
| CfoI | GCGC | 6 cut(s) | 47, 159, 168, 476, 1244, 1319 |
| Cfr10I | RCCGGY | 2 cut(s) | 113, 796 |
| ClaI | ATCGAT | 1 cut(s) | 93 |
| CpoI | CGGWCCG | 1 cut(s) | 930 |
| CseI | GACGC | 6 cut(s) | 22, 119, 230, 605, 619, 742 |
| Csp6I | GTAC | 2 cut(s) | 1204, 1276 |
| CspI | CGGWCCG | 1 cut(s) | 930 |
| CviAII | CATG | 8 cut(s) | 146, 181, 529, 1042, 1219, 1337, 1537, 1607 |
| CviQI | GTAC | 2 cut(s) | 1204, 1276 |
| DdeI | CTNAG | 5 cut(s) | 153, 390, 602, 893, 1194 |
| DpnI | GATC | 7 cut(s) | 92, 315, 498, 521, 1066, 1112, 1133 |
| DpnII | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| EaeI | YGGCCR | 3 cut(s) | 105, 794, 915 |
| Eam1104I | CTCTTC | 3 cut(s) | 61, 384, 1461 |
| EarI | CTCTTC | 3 cut(s) | 61, 384, 1461 |
| EciI | GGCGGA | 2 cut(s) | 372, 1283 |
| Ecl136II | GAGCTC | 1 cut(s) | 655 |
| Eco130I | CCWWGG | 1 cut(s) | 1263 |
| Eco147I | AGGCCT | 2 cut(s) | 680, 1262 |
| Eco24I | GRGCYC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco47I | GGWCC | 8 cut(s) | 124, 349, 369, 863, 930, 1069, 1159, 1183 |
| Eco53kI | GAGCTC | 1 cut(s) | 655 |
| Eco57I | CTGAAG | 2 cut(s) | 1470, 1569 |
| Eco72I | CACGTG | 2 cut(s) | 471, 548 |
| Eco88I | CYCGRG | 4 cut(s) | 161, 170, 977, 1323 |
| EcoICRI | GAGCTC | 1 cut(s) | 655 |
| EcoO109I | RGGNCCY | 4 cut(s) | 5, 6, 811, 834 |
| EcoRI | GAATTC | 1 cut(s) | 1081 |
| EcoRII | CCWGG | 5 cut(s) | 254, 365, 726, 738, 813 |
| EcoT14I | CCWWGG | 1 cut(s) | 1263 |
| EcoT38I | GRGCYC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| ErhI | CCWWGG | 1 cut(s) | 1263 |
| FaeI | CATG | 8 cut(s) | 149, 184, 532, 1045, 1222, 1340, 1540, 1610 |
| FaqI | GGGAC | 1 cut(s) | 1383 |
| FatI | CATG | 8 cut(s) | 145, 180, 528, 1041, 1218, 1336, 1536, 1606 |
| FauI | CCCGC | 2 cut(s) | 91, 502 |
| FblI | GTMKAC | 1 cut(s) | 261 |
| FokI | GGATG | 4 cut(s) | 295, 710, 995, 1009 |
| FriOI | GRGCYC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| GlaI | GCGC | 6 cut(s) | 46, 158, 167, 475, 1243, 1318 |
| GsaI | CCCAGC | 3 cut(s) | 211, 1106, 1370 |
| HaeII | RGCGCY | 3 cut(s) | 48, 160, 169 |
| HgaI | GACGC | 6 cut(s) | 22, 119, 230, 605, 619, 742 |
| HhaI | GCGC | 6 cut(s) | 47, 159, 168, 476, 1244, 1319 |
| Hin1I | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| Hin1II | CATG | 8 cut(s) | 149, 184, 532, 1045, 1222, 1340, 1540, 1610 |
| Hin6I | GCGC | 6 cut(s) | 45, 157, 166, 474, 1242, 1317 |
| HinP1I | GCGC | 6 cut(s) | 45, 157, 166, 474, 1242, 1317 |
| HincII | GTYRAC | 4 cut(s) | 187, 262, 553, 937 |
| HindII | GTYRAC | 4 cut(s) | 187, 262, 553, 937 |
| HinfI | GANTC | 8 cut(s) | 263, 437, 479, 535, 612, 887, 1188, 1226 |
| HphI | GGTGA | 4 cut(s) | 64, 403, 700, 1018 |
| Hpy166II | GTNNAC | 7 cut(s) | 187, 262, 457, 553, 757, 937, 1033 |
| Hpy188III | TCNNGA | 8 cut(s) | 172, 317, 523, 644, 746, 1093, 1114, 1135 |
| Hpy8I | GTNNAC | 7 cut(s) | 187, 262, 457, 553, 757, 937, 1033 |
| Hpy99I | CGWCG | 6 cut(s) | 113, 224, 419, 599, 635, 1478 |
| HpyAV | CCTTC | 6 cut(s) | 745, 879, 917, 1009, 1252, 1445 |
| HpyCH4III | ACNGT | 5 cut(s) | 14, 22, 178, 415, 1141 |
| HpyCH4IV | ACGT | 5 cut(s) | 470, 547, 759, 939, 1299 |
| HpyCH4V | TGCA | 9 cut(s) | 532, 781, 790, 1003, 1045, 1051, 1249, 1296, 1393 |
| HpyF3I | CTNAG | 5 cut(s) | 153, 390, 602, 893, 1194 |
| HpySE526I | ACGT | 5 cut(s) | 470, 547, 759, 939, 1299 |
| Hsp92I | GRCGYC | 4 cut(s) | 33, 111, 222, 597 |
| Hsp92II | CATG | 8 cut(s) | 149, 184, 532, 1045, 1222, 1340, 1540, 1610 |
| HspAI | GCGC | 6 cut(s) | 45, 157, 166, 474, 1242, 1317 |
| Kpn2I | TCCGGA | 1 cut(s) | 1113 |
| KroI | GCCGGC | 2 cut(s) | 113, 796 |
| KroNI | GCCGGC | 2 cut(s) | 115, 798 |
| Kzo9I | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| LmnI | GCTCC | 7 cut(s) | 32, 56, 134, 273, 660, 849, 1147 |
| LweI | GCATC | 6 cut(s) | 319, 576, 987, 1060, 1089, 1236 |
| MaeII | ACGT | 5 cut(s) | 470, 547, 759, 939, 1299 |
| MaeIII | GTNAC | 6 cut(s) | 70, 418, 466, 584, 743, 1135 |
| MalI | GATC | 7 cut(s) | 92, 315, 498, 521, 1066, 1112, 1133 |
| MbiI | CCGCTC | 1 cut(s) | 129 |
| MboI | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| MboII | GAAGA | 8 cut(s) | 48, 51, 371, 443, 446, 607, 1141, 1478 |
| MflI | RGATCY | 2 cut(s) | 496, 1110 |
| MhlI | GDGCHC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| MluCI | AATT | 3 cut(s) | 695, 920, 1081 |
| MlyI | GAGTC | 4 cut(s) | 257, 529, 881, 1220 |
| MmeI | TCCRAC | 6 cut(s) | 159, 243, 267, 368, 871, 1212 |
| MroI | TCCGGA | 1 cut(s) | 1113 |
| MroNI | GCCGGC | 2 cut(s) | 113, 796 |
| MroXI | GAANNNNTTC | 1 cut(s) | 378 |
| MseI | TTAA | 2 cut(s) | 776, 1584 |
| MslI | CAYNNNNRTG | 1 cut(s) | 425 |
| MspA1I | CMGCKG | 2 cut(s) | 561, 1048 |
| MspR9I | CCNGG | 9 cut(s) | 256, 367, 442, 728, 740, 815, 828, 1174, 1378 |
| MvaI | CCWGG | 5 cut(s) | 256, 367, 728, 740, 815 |
| MvnI | CGCG | 6 cut(s) | 503, 957, 1244, 1319, 1461, 1517 |
| NaeI | GCCGGC | 2 cut(s) | 115, 798 |
| NciI | CCSGG | 4 cut(s) | 442, 828, 1174, 1378 |
| NdeII | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| NgoMIV | GCCGGC | 2 cut(s) | 113, 796 |
| NlaIII | CATG | 8 cut(s) | 149, 184, 532, 1045, 1222, 1340, 1540, 1610 |
| NlaIV | GGNNCC | 9 cut(s) | 6, 7, 835, 836, 1071, 1112, 1118, 1402, 1481 |
| NmeAIII | GCCGAG | 5 cut(s) | 112, 617, 1342, 1424, 1470 |
| NmuCI | GTSAC | 5 cut(s) | 70, 418, 466, 743, 1135 |
| NspI | RCATGY | 2 cut(s) | 149, 532 |
| PaeR7I | CTCGAG | 4 cut(s) | 161, 170, 977, 1323 |
| PaqCI | CACCTGC | 1 cut(s) | 994 |
| PceI | AGGCCT | 2 cut(s) | 680, 1262 |
| PciI | ACATGT | 1 cut(s) | 145 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 18, 168 |
| PdiI | GCCGGC | 2 cut(s) | 115, 798 |
| PdmI | GAANNNNTTC | 1 cut(s) | 378 |
| PfeI | GAWTC | 4 cut(s) | 437, 479, 612, 1188 |
| PfoI | TCCNGGA | 2 cut(s) | 440, 726 |
| PleI | GAGTC | 4 cut(s) | 257, 529, 881, 1220 |
| PmaCI | CACGTG | 2 cut(s) | 471, 548 |
| PmlI | CACGTG | 2 cut(s) | 471, 548 |
| PpsI | GAGTC | 4 cut(s) | 257, 529, 881, 1220 |
| Ppu21I | YACGTR | 2 cut(s) | 471, 548 |
| PscI | ACATGT | 1 cut(s) | 145 |
| PshBI | ATTAAT | 1 cut(s) | 1584 |
| Psp124BI | GAGCTC | 1 cut(s) | 657 |
| Psp6I | CCWGG | 5 cut(s) | 254, 365, 726, 738, 813 |
| PspCI | CACGTG | 2 cut(s) | 471, 548 |
| PspFI | CCCAGC | 3 cut(s) | 207, 1102, 1366 |
| PspGI | CCWGG | 5 cut(s) | 254, 365, 726, 738, 813 |
| PspN4I | GGNNCC | 9 cut(s) | 6, 7, 835, 836, 1071, 1112, 1118, 1402, 1481 |
| PspOMI | GGGCCC | 2 cut(s) | 5, 833 |
| PspXI | VCTCGAGB | 3 cut(s) | 161, 977, 1323 |
| PstI | CTGCAG | 1 cut(s) | 1005 |
| PstNI | CAGNNNCTG | 2 cut(s) | 538, 814 |
| PsuI | RGATCY | 2 cut(s) | 496, 1110 |
| PvuII | CAGCTG | 2 cut(s) | 561, 1048 |
| RsaI | GTAC | 2 cut(s) | 1205, 1277 |
| RsaNI | GTAC | 2 cut(s) | 1204, 1276 |
| RseI | CAYNNNNRTG | 1 cut(s) | 425 |
| Rsr2I | CGGWCCG | 1 cut(s) | 930 |
| RsrII | CGGWCCG | 1 cut(s) | 930 |
| SacI | GAGCTC | 1 cut(s) | 657 |
| SalI | GTCGAC | 1 cut(s) | 260 |
| SaqAI | TTAA | 2 cut(s) | 776, 1584 |
| Sau3AI | GATC | 7 cut(s) | 90, 313, 496, 519, 1064, 1110, 1131 |
| SchI | GAGTC | 4 cut(s) | 257, 529, 881, 1220 |
| ScrFI | CCNGG | 9 cut(s) | 256, 367, 442, 728, 740, 815, 828, 1174, 1378 |
| SduI | GDGCHC | 7 cut(s) | 9, 515, 657, 837, 1013, 1363, 1390 |
| SfaNI | GCATC | 6 cut(s) | 319, 576, 987, 1060, 1089, 1236 |
| SfcI | CTRYAG | 1 cut(s) | 1001 |
| Sfr274I | CTCGAG | 4 cut(s) | 161, 170, 977, 1323 |
| SinI | GGWCC | 8 cut(s) | 124, 349, 369, 863, 930, 1069, 1159, 1183 |
| SlaI | CTCGAG | 4 cut(s) | 161, 170, 977, 1323 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 425 |
| SmlI | CTYRAG | 4 cut(s) | 161, 170, 977, 1323 |
| SmoI | CTYRAG | 4 cut(s) | 161, 170, 977, 1323 |
| Sse9I | AATT | 3 cut(s) | 695, 920, 1081 |
| SseBI | AGGCCT | 2 cut(s) | 680, 1262 |
| SstI | GAGCTC | 1 cut(s) | 657 |
| StuI | AGGCCT | 2 cut(s) | 680, 1262 |
| StyD4I | CCNGG | 9 cut(s) | 254, 365, 440, 726, 738, 813, 826, 1172, 1376 |
| StyI | CCWWGG | 1 cut(s) | 1263 |
| TaaI | ACNGT | 5 cut(s) | 14, 22, 178, 415, 1141 |
| TaiI | ACGT | 5 cut(s) | 473, 550, 762, 942, 1302 |
| TaqII | GACCGA | 3 cut(s) | 386, 918, 1200 |
| TasI | AATT | 3 cut(s) | 695, 920, 1081 |
| TatI | WGTACW | 2 cut(s) | 1203, 1275 |
| TauI | GCSGC | 7 cut(s) | 388, 567, 609, 960, 968, 1322, 1520 |
| TfiI | GAWTC | 4 cut(s) | 437, 479, 612, 1188 |
| Tru1I | TTAA | 2 cut(s) | 776, 1584 |
| Tru9I | TTAA | 2 cut(s) | 776, 1584 |
| TscAI | CASTG | 2 cut(s) | 1035, 1198 |
| TseFI | GTSAC | 5 cut(s) | 70, 418, 466, 743, 1135 |
| Tsp45I | GTSAC | 5 cut(s) | 70, 418, 466, 743, 1135 |
| TspDTI | ATGAA | 1 cut(s) | 580 |
| TspGWI | ACGGA | 5 cut(s) | 58, 362, 472, 922, 932 |
| TspRI | CASTG | 2 cut(s) | 1035, 1198 |
| VpaK11BI | GGWCC | 8 cut(s) | 124, 349, 369, 863, 930, 1069, 1159, 1183 |
| VspI | ATTAAT | 1 cut(s) | 1584 |
| XapI | RAATTY | 2 cut(s) | 695, 1081 |
| XceI | RCATGY | 2 cut(s) | 149, 532 |
| XhoI | CTCGAG | 4 cut(s) | 161, 170, 977, 1323 |
| XmiI | GTMKAC | 1 cut(s) | 261 |
| XmnI | GAANNNNTTC | 1 cut(s) | 378 |