Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0013583

Physical Location & Seq

Genomic Coordinates Reverse (-)

3287390 .. 3289595

Gene Structure 2206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G003570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGAGCCGTACGGCAATTCCGGTGTCGTCAGCAGCAGCGCCAGCTCCTCTTCCTCCTCCTCCGCCGCCTCCATAACCAAGCCGCATGAGATGGACGGGTATTTGGCCGAGGCCGGGTACAAGGTCCGCTCCTCCGACCTACGACACGTCGCTCAGCGCCTCGAGCGCTTGGAAAACGTCATGGTCAACTCCCCCAACGACCTCGCCCACTTCGCCTCCGACGCCGTCATCTACAACCCCTCCGACCTCGCCTCCTGGGTCGACTCCCTCCTCTCCGCCTCCGACCTCTCCATCTCCGATCTCGACTTCCCTGGCGTCATCATCAACAATCATCACACCGCTCTCCCCACCGCCGACACGTGGACCGAAATTCCACCGATCTCCGCCTCCGCCGCCGCGCCGCCGCAGAACCACCACCAGGTAACCGCCGTGATGGAGGAAGACTCCGGGATTAGGCTGGTGCAGCTGCTCGTCACGTGCGCCGAGTCCGTCCAGCGCGGCGATCTCGCATTGGCCGGCTCGATTATCGAGACCATGCAGGCGCTGCTCACACGTGTCAACACGGGTTGCGGCATCGGAAAGGTCGCCGGCTACTTCATCGACGCCCTCAGCCGCCGCGTCTTCACCCCGCAGAGCGTCGGCTCCGACGGCGGCTCGGCTCACCAGAACGAGCTTCTCTACCACTACTTCTACGAAGCCTGCCCCTACCTCAAATTCGCGCATTTCACGGCGAACCAGGCGATCTTGGAGGCCTTCCACGGCCACGATTGCGTCCACGTTATCGACTTCAACTTAATGCACGGACTCCAATGGCCGGCGCTGATTCAGGCTCTGGCTTTACGGCCCGGTGGGCCCCCCTTGCTTCGGCTGACGGGCATTGGGCCGCCGTCACCTGACGGCCGTGACTCGCTAAGAGAAATCGGGCTCCGGCTCGCGGAGCTGGCTCGCTCCGTTAACGTCCGTTTCGCTTTCCGCGGCGTGGCGGCTTCGCGGCTCGAGGACGTTAAGCCGTGGATGCTTCAGGTCAGTCCAAAGGAAGCCGTAGCTGTAAACTCGATCATGCAGCTCCATAGACTTCTCGGATCCGATTCGAACCGGAATTCTCCGATTGAAATGATGTTGGGATGGATCCGAAATCTTAACCCGAAGATTGTCACCGTCGTGGAGCAAGAAGCGGACCACAACAAGGCAGGGTTCTTGGAGCGGTTCACGGAGGCTCTTTACTACTACTCCAATATGTTCGACTCGCTCGAAGCTTGCGGCGCCATGCAGCCGGACAAGACCCTAGCGGAGATGTACATACAAAGAGAGATATGTAACGTGGTATGCTGCGAGGGACTGGCTCGCGTCGAGAGACACGAGCCGCTCTCTAAGTGGAGAATCCGGCTGGAACTAGCCGGATTCAGCCCGCTCCACTTGGGGTCGAATGCGTTCAAGCAGGCGAGTATGCTGCTGACGCTGTTCTCGGCGGAAGGTTATCGTGTGGAAGAGAAGGAAGGGTGTCTTACACTCGGCTGGCATAGCCGACCTCTGATTGCGGCTTCGGCTTGGCAGGTTATGCCTTTGCCTGAAGCAACCGCAACAGCGACCAACCCACTTGGGATTGTTAATCATAGTGCCAATCATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

543

Amino Acids

59.33

Weight (kDa)

5.7

Isoelectric Point (pI)

40.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	32 - 93	1.8e-27	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	153 - 518	5.9e-128	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013583)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04080
malus_domestica	MD02G1039600.v1.1 MD15G1180500.v1.1
prunus_persica	Prupe.7G236100_v2.0.a1
pyrus_communis	pycom02g03290 pycom15g16190
rosa_chinensis	RchiOBHm_Chr2g0089571
rosa_laevigata	RLG00000016041
rosa_multiflora	Rmu_co8325249.1_g000001 Rmu_co8349301.1_g000001 Rmu_sc0006193.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151810
rosa_rugosa	Rorug02G0001500
rosa_samantha	Rh2AG047000 Rh2BG045800 Rh2CG047600 Rh2DG047200
rosa_wichuraiana	Rw2G003570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1543
AccB1I	GGYRCC	1 cut(s)	1262
AccBSI	CCGCTC	5 cut(s)	129, 341, 1204, 1366, 1411
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
AclWI	GGATC	4 cut(s)	1077, 1090, 1123, 1136
AcoI	YGGCCR	5 cut(s)	105, 513, 760, 812, 898
AcsI	RAATTY	3 cut(s)	369, 713, 1099
AcuI	CTGAAG	2 cut(s)	1004, 1590
AcvI	CACGTG	3 cut(s)	360, 477, 554
AcyI	GRCGYC	4 cut(s)	222, 315, 603, 1263
AfaI	GTAC	3 cut(s)	11, 119, 1298
AfeI	AGCGCT	1 cut(s)	167
AfiI	CCNNNNNNNGG	9 cut(s)	114, 360, 418, 453, 814, 864, 934, 979, 1186
AflIII	ACRYGT	4 cut(s)	145, 357, 551, 553
AgsI	TTSAA	3 cut(s)	790, 1112, 1435
AjiI	CACGTC	1 cut(s)	148
AjnI	CCWGG	4 cut(s)	254, 310, 417, 735
AleI	CACNNNNGTG	1 cut(s)	1160
AluBI	AGCT	7 cut(s)	45, 466, 673, 940, 1046, 1066, 1256
AluI	AGCT	7 cut(s)	45, 466, 673, 940, 1046, 1066, 1256
Alw26I	GTCTC	2 cut(s)	524, 1348
AlwI	GGATC	4 cut(s)	1077, 1090, 1123, 1136
AlwNI	CAGNNNCTG	2 cut(s)	544, 832
Ama87I	CYCGRG	2 cut(s)	161, 995
Aor51HI	AGCGCT	1 cut(s)	167
ApaI	GGGCCC	1 cut(s)	855
ApeKI	GCWGC	9 cut(s)	33, 36, 463, 466, 544, 1063, 1270, 1329, 1450
ApoI	RAATTY	3 cut(s)	369, 713, 1099
Asp700I	GAANNNNTTC	1 cut(s)	1430
AspS9I	GGNCC	7 cut(s)	124, 363, 843, 851, 852, 881, 1177
AsuC2I	CCSGG	3 cut(s)	115, 448, 846
AsuHPI	GGTGA	4 cut(s)	616, 653, 882, 1147
AsuII	TTCGAA	1 cut(s)	1091
AvaI	CYCGRG	2 cut(s)	161, 995
AvaII	GGWCC	3 cut(s)	124, 363, 1177
BaeGI	GKGCMC	1 cut(s)	855
BamHI	GGATCC	2 cut(s)	1082, 1128
BanI	GGYRCC	1 cut(s)	1262
BanII	GRGCYC	2 cut(s)	855, 927
BauI	CACGAG	1 cut(s)	1358
BbrPI	CACGTG	3 cut(s)	360, 477, 554
BbsI	GAAGAC	2 cut(s)	447, 613
BbvCI	CCTCAGC	1 cut(s)	608
BbvI	GCAGC	9 cut(s)	45, 48, 453, 475, 531, 1075, 1282, 1316, 1437
BccI	CCATC	4 cut(s)	85, 299, 427, 1119
BcgI	CGANNNNNNTGC	2 cut(s)	1432, 1466
BciT130I	CCWGG	4 cut(s)	256, 312, 419, 737
BcnI	CCSGG	3 cut(s)	115, 448, 846
BcoDI	GTCTC	2 cut(s)	524, 1348
BfaI	CTAG	2 cut(s)	1286, 1394
BfoI	RGCGCY	6 cut(s)	42, 160, 169, 545, 821, 1266
BfuAI	ACCTGC	1 cut(s)	1543
BglI	GCCNNNNNGGC	1 cut(s)	850
BlpI	GCTNAGC	1 cut(s)	153
Bme1390I	CCNGG	7 cut(s)	115, 256, 312, 419, 448, 737, 846
Bme18I	GGWCC	3 cut(s)	124, 363, 1177
BmeT110I	CYCGRG	2 cut(s)	161, 995
BmgBI	CACGTC	1 cut(s)	148
BmgT120I	GGNCC	7 cut(s)	124, 363, 843, 851, 852, 881, 1177
BmiI	GGNNCC	8 cut(s)	6, 643, 853, 854, 926, 1084, 1130, 1264
BmrFI	CCNGG	7 cut(s)	115, 256, 312, 419, 448, 737, 846
BmsI	GCATC	2 cut(s)	582, 1005
BpiI	GAAGAC	2 cut(s)	447, 613
BplI	GAGNNNNNCTC	4 cut(s)	428, 460, 1352, 1384
Bpu10I	CCTNAGC	1 cut(s)	608
Bpu1102I	GCTNAGC	1 cut(s)	153
Bpu14I	TTCGAA	1 cut(s)	1091
BpuMI	CCSGG	3 cut(s)	115, 448, 846
BsaAI	YACGTR	3 cut(s)	360, 477, 554
BsaHI	GRCGYC	4 cut(s)	222, 315, 603, 1263
BsaI	GGTCTC	1 cut(s)	524
BsaJI	CCNNGG	6 cut(s)	108, 255, 310, 757, 973, 1010
BsaWI	WCCGGW	2 cut(s)	20, 1095
BsaXI	ACNNNNNCTCC	8 cut(s)	200, 224, 230, 236, 254, 266, 1214, 1244
Bsc4I	CCNNNNNNNGG	9 cut(s)	114, 360, 418, 453, 814, 864, 934, 979, 1186
Bse118I	RCCGGY	3 cut(s)	515, 587, 814
Bse1I	ACTGG	1 cut(s)	1344
BseBI	CCWGG	4 cut(s)	256, 312, 419, 737
BseDI	CCNNGG	6 cut(s)	108, 255, 310, 757, 973, 1010
BseGI	GGATG	2 cut(s)	1020, 1130
BseLI	CCNNNNNNNGG	9 cut(s)	114, 360, 418, 453, 814, 864, 934, 979, 1186
BseMII	CTCAG	2 cut(s)	167, 622
BseNI	ACTGG	1 cut(s)	1344
BseRI	GAGGAG	5 cut(s)	37, 46, 49, 121, 260
BseSI	GKGCMC	1 cut(s)	855
BseX3I	CGGCCG	1 cut(s)	898
BseXI	GCAGC	9 cut(s)	45, 48, 453, 475, 531, 1075, 1282, 1316, 1437
BsgI	GTGCAG	1 cut(s)	482
Bsh1236I	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
Bsh1285I	CGRYCG	1 cut(s)	901
BshNI	GGYRCC	1 cut(s)	1262
BsiEI	CGRYCG	1 cut(s)	901
BsiHKCI	CYCGRG	2 cut(s)	161, 995
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	1 cut(s)	1350
BslI	CCNNNNNNNGG	9 cut(s)	114, 360, 418, 453, 814, 864, 934, 979, 1186
BsmAI	GTCTC	2 cut(s)	524, 1348
BsmFI	GGGAC	1 cut(s)	1350
BsmI	GAATGC	1 cut(s)	1432
Bso31I	GGTCTC	1 cut(s)	524
BsoBI	CYCGRG	2 cut(s)	161, 995
Bsp119I	TTCGAA	1 cut(s)	1091
Bsp120I	GGGCCC	1 cut(s)	851
Bsp1286I	GDGCHC	2 cut(s)	855, 927
Bsp1407I	TGTACA	1 cut(s)	1296
Bsp143I	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
Bsp1720I	GCTNAGC	1 cut(s)	153
BspCNI	CTCAG	2 cut(s)	166, 621
BspFNI	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
BspLI	GGNNCC	8 cut(s)	6, 643, 853, 854, 926, 1084, 1130, 1264
BspMI	ACCTGC	1 cut(s)	1543
BspPI	GGATC	4 cut(s)	1077, 1090, 1123, 1136
BspT104I	TTCGAA	1 cut(s)	1091
BspT107I	GGYRCC	1 cut(s)	1262
BspTNI	GGTCTC	1 cut(s)	524
BsrBI	CCGCTC	5 cut(s)	129, 341, 1204, 1366, 1411
BsrFI	RCCGGY	3 cut(s)	515, 587, 814
BsrGI	TGTACA	1 cut(s)	1296
BsrI	ACTGG	1 cut(s)	1344
BssAI	RCCGGY	3 cut(s)	515, 587, 814
BssECI	CCNNGG	6 cut(s)	108, 255, 310, 757, 973, 1010
BssMI	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
BssNI	GRCGYC	4 cut(s)	222, 315, 603, 1263
BssSI	CACGAG	1 cut(s)	1358
Bst2BI	CACGAG	1 cut(s)	1358
Bst2UI	CCWGG	4 cut(s)	256, 312, 419, 737
Bst4CI	ACNGT	1 cut(s)	1159
Bst6I	CTCTTC	2 cut(s)	55, 1482
BstACI	GRCGYC	4 cut(s)	222, 315, 603, 1263
BstAPI	GCANNNNNTGC	2 cut(s)	544, 1558
BstAUI	TGTACA	1 cut(s)	1296
BstBAI	YACGTR	3 cut(s)	360, 477, 554
BstBI	TTCGAA	1 cut(s)	1091
BstDEI	CTNAG	4 cut(s)	153, 608, 911, 1371
BstDSI	CCRYGG	3 cut(s)	757, 973, 1010
BstEII	GGTNACC	1 cut(s)	421
BstF5I	GGATG	2 cut(s)	1020, 1130
BstFNI	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
BstH2I	RGCGCY	6 cut(s)	42, 160, 169, 545, 821, 1266
BstKTI	GATC	7 cut(s)	301, 381, 505, 744, 1059, 1085, 1131
BstMAI	GTCTC	2 cut(s)	524, 1348
BstMBI	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
BstMCI	CGRYCG	1 cut(s)	901
BstNI	CCWGG	4 cut(s)	256, 312, 419, 737
BstPI	GGTNACC	1 cut(s)	421
BstSCI	CCNGG	7 cut(s)	113, 254, 310, 417, 446, 735, 844
BstSLI	GKGCMC	1 cut(s)	855
BstUI	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
BstV1I	GCAGC	9 cut(s)	45, 48, 453, 475, 531, 1075, 1282, 1316, 1437
BstV2I	GAAGAC	2 cut(s)	447, 613
BstX2I	RGATCY	2 cut(s)	1082, 1128
BstYI	RGATCY	2 cut(s)	1082, 1128
BstZI	CGGCCG	1 cut(s)	898
BtgI	CCRYGG	3 cut(s)	757, 973, 1010
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	2 cut(s)	1020, 1130
BveI	ACCTGC	1 cut(s)	1543
CaiI	CAGNNNCTG	2 cut(s)	544, 832
Cfr10I	RCCGGY	3 cut(s)	515, 587, 814
Cfr13I	GGNCC	7 cut(s)	124, 363, 843, 851, 852, 881, 1177
Cfr42I	CCGCGG	1 cut(s)	976
CseI	GACGC	8 cut(s)	230, 304, 607, 611, 625, 760, 1336, 1465
CsiI	ACCWGGT	1 cut(s)	417
Csp6I	GTAC	3 cut(s)	10, 118, 1297
CviAII	CATG	6 cut(s)	86, 181, 535, 1060, 1267, 1625
CviQI	GTAC	3 cut(s)	10, 118, 1297
DdeI	CTNAG	4 cut(s)	153, 608, 911, 1371
DinI	GGCGCC	1 cut(s)	1264
DpnI	GATC	7 cut(s)	300, 380, 504, 743, 1058, 1084, 1130
DpnII	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
EaeI	YGGCCR	5 cut(s)	105, 513, 760, 812, 898
EagI	CGGCCG	1 cut(s)	898
Eam1104I	CTCTTC	2 cut(s)	55, 1482
EarI	CTCTTC	2 cut(s)	55, 1482
EciI	GGCGGA	5 cut(s)	52, 265, 373, 379, 1484
EclXI	CGGCCG	1 cut(s)	898
Eco147I	AGGCCT	1 cut(s)	752
Eco24I	GRGCYC	2 cut(s)	855, 927
Eco31I	GGTCTC	1 cut(s)	524
Eco47I	GGWCC	3 cut(s)	124, 363, 1177
Eco47III	AGCGCT	1 cut(s)	167
Eco52I	CGGCCG	1 cut(s)	898
Eco57I	CTGAAG	2 cut(s)	1004, 1590
Eco72I	CACGTG	3 cut(s)	360, 477, 554
Eco88I	CYCGRG	2 cut(s)	161, 995
Eco91I	GGTNACC	1 cut(s)	421
EcoO109I	RGGNCCY	1 cut(s)	852
EcoO65I	GGTNACC	1 cut(s)	421
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	4 cut(s)	254, 310, 417, 735
EcoT38I	GRGCYC	2 cut(s)	855, 927
EgeI	GGCGCC	1 cut(s)	1264
EheI	GGCGCC	1 cut(s)	1264
FaeI	CATG	6 cut(s)	89, 184, 538, 1063, 1270, 1628
FalI	AAGNNNNNCTT	2 cut(s)	1488, 1520
FaqI	GGGAC	1 cut(s)	1350
FatI	CATG	6 cut(s)	85, 180, 534, 1059, 1266, 1624
FauI	CCCGC	2 cut(s)	636, 1416
FblI	GTMKAC	1 cut(s)	261
FokI	GGATG	2 cut(s)	1027, 1137
FriOI	GRGCYC	2 cut(s)	855, 927
FspBI	CTAG	2 cut(s)	1286, 1394
HaeII	RGCGCY	6 cut(s)	42, 160, 169, 545, 821, 1266
HgaI	GACGC	8 cut(s)	230, 304, 607, 611, 625, 760, 1336, 1465
Hin1I	GRCGYC	4 cut(s)	222, 315, 603, 1263
Hin1II	CATG	6 cut(s)	89, 184, 538, 1063, 1270, 1628
HincII	GTYRAC	4 cut(s)	187, 262, 559, 955
HindII	GTYRAC	4 cut(s)	187, 262, 559, 955
HindIII	AAGCTT	1 cut(s)	1254
HpaI	GTTAAC	1 cut(s)	955
HphI	GGTGA	4 cut(s)	616, 653, 882, 1147
Hpy166II	GTNNAC	8 cut(s)	187, 262, 363, 559, 775, 955, 1051, 1209
Hpy188III	TCNNGA	3 cut(s)	302, 529, 1351
Hpy8I	GTNNAC	8 cut(s)	187, 262, 363, 559, 775, 955, 1051, 1209
Hpy99I	CGWCG	7 cut(s)	152, 224, 605, 641, 650, 1163, 1352
HpyAV	CCTTC	4 cut(s)	763, 1466, 1486, 1490
HpyCH4III	ACNGT	1 cut(s)	1159
HpyCH4IV	ACGT	9 cut(s)	147, 177, 359, 476, 553, 777, 957, 1002, 1320
HpyCH4V	TGCA	5 cut(s)	463, 538, 799, 1063, 1270
HpyF3I	CTNAG	4 cut(s)	153, 608, 911, 1371
HpySE526I	ACGT	9 cut(s)	147, 177, 359, 476, 553, 777, 957, 1002, 1320
Hsp92I	GRCGYC	4 cut(s)	222, 315, 603, 1263
Hsp92II	CATG	6 cut(s)	89, 184, 538, 1063, 1270, 1628
KasI	GGCGCC	1 cut(s)	1262
KroI	GCCGGC	3 cut(s)	515, 587, 814
KroNI	GCCGGC	3 cut(s)	517, 589, 816
KspAI	GTTAAC	1 cut(s)	955
KspI	CCGCGG	1 cut(s)	976
Kzo9I	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
Lsp1109I	GCAGC	9 cut(s)	45, 48, 453, 475, 531, 1075, 1282, 1316, 1437
LweI	GCATC	2 cut(s)	582, 1005
MabI	ACCWGGT	1 cut(s)	417
MaeI	CTAG	2 cut(s)	1286, 1394
MaeII	ACGT	9 cut(s)	147, 177, 359, 476, 553, 777, 957, 1002, 1320
MaeIII	GTNAC	6 cut(s)	421, 472, 888, 902, 1153, 1316
MalI	GATC	7 cut(s)	300, 380, 504, 743, 1058, 1084, 1130
MbiI	CCGCTC	5 cut(s)	129, 341, 1204, 1366, 1411
MboI	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
MboII	GAAGA	5 cut(s)	42, 452, 613, 1159, 1499
MflI	RGATCY	2 cut(s)	1082, 1128
MhlI	GDGCHC	2 cut(s)	855, 927
MluCI	AATT	4 cut(s)	16, 369, 713, 1099
Mly113I	GGCGCC	1 cut(s)	1263
MlyI	GAGTC	6 cut(s)	257, 437, 494, 798, 899, 1238
MmeI	TCCRAC	5 cut(s)	159, 243, 267, 306, 669
MroNI	GCCGGC	3 cut(s)	515, 587, 814
MroXI	GAANNNNTTC	1 cut(s)	1430
MseI	TTAA	5 cut(s)	794, 954, 1005, 1140, 1608
MslI	CAYNNNNRTG	1 cut(s)	1160
MspA1I	CMGCKG	2 cut(s)	466, 975
MspR9I	CCNGG	7 cut(s)	115, 256, 312, 419, 448, 737, 846
Mva1269I	GAATGC	1 cut(s)	1432
MvaI	CCWGG	4 cut(s)	256, 312, 419, 737
MvnI	CGCG	8 cut(s)	398, 498, 618, 719, 935, 975, 991, 1347
NaeI	GCCGGC	3 cut(s)	517, 589, 816
NarI	GGCGCC	1 cut(s)	1263
NciI	CCSGG	3 cut(s)	115, 448, 846
NdeII	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
NgoMIV	GCCGGC	3 cut(s)	515, 587, 814
NlaIII	CATG	6 cut(s)	89, 184, 538, 1063, 1270, 1628
NlaIV	GGNNCC	8 cut(s)	6, 643, 853, 854, 926, 1084, 1130, 1264
NmeAIII	GCCGAG	5 cut(s)	133, 508, 635, 1445, 1491
NmuCI	GTSAC	4 cut(s)	472, 888, 902, 1153
NspV	TTCGAA	1 cut(s)	1091
OliI	CACNNNNGTG	1 cut(s)	1160
PaeR7I	CTCGAG	2 cut(s)	161, 995
PceI	AGGCCT	1 cut(s)	752
PcsI	WCGNNNNNNNCGW	2 cut(s)	1248, 1356
PctI	GAATGC	1 cut(s)	1432
PdiI	GCCGGC	3 cut(s)	517, 589, 816
PdmI	GAANNNNTTC	1 cut(s)	1430
PfeI	GAWTC	4 cut(s)	823, 1088, 1380, 1401
Pfl23II	CGTACG	1 cut(s)	9
PflFI	GACNNNGTC	1 cut(s)	224
PfoI	TCCNGGA	1 cut(s)	446
PleI	GAGTC	6 cut(s)	257, 437, 493, 798, 899, 1238
PluTI	GGCGCC	1 cut(s)	1266
PmaCI	CACGTG	3 cut(s)	360, 477, 554
PmlI	CACGTG	3 cut(s)	360, 477, 554
PpsI	GAGTC	6 cut(s)	257, 437, 493, 798, 899, 1238
Ppu21I	YACGTR	3 cut(s)	360, 477, 554
Psp6I	CCWGG	4 cut(s)	254, 310, 417, 735
PspCI	CACGTG	3 cut(s)	360, 477, 554
PspEI	GGTNACC	1 cut(s)	421
PspGI	CCWGG	4 cut(s)	254, 310, 417, 735
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	8 cut(s)	6, 643, 853, 854, 926, 1084, 1130, 1264
PspOMI	GGGCCC	1 cut(s)	851
PspPI	GGNCC	7 cut(s)	124, 363, 843, 851, 852, 881, 1177
PspXI	VCTCGAGB	2 cut(s)	161, 995
PstNI	CAGNNNCTG	2 cut(s)	544, 832
PsuI	RGATCY	2 cut(s)	1082, 1128
PsyI	GACNNNGTC	1 cut(s)	224
PvuII	CAGCTG	1 cut(s)	466
RsaI	GTAC	3 cut(s)	11, 119, 1298
RsaNI	GTAC	3 cut(s)	10, 118, 1297
RseI	CAYNNNNRTG	1 cut(s)	1160
SacII	CCGCGG	1 cut(s)	976
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	5 cut(s)	794, 954, 1005, 1140, 1608
Sau3AI	GATC	7 cut(s)	298, 378, 502, 741, 1056, 1082, 1128
Sau96I	GGNCC	7 cut(s)	124, 363, 843, 851, 852, 881, 1177
SchI	GAGTC	6 cut(s)	257, 437, 494, 798, 899, 1238
ScrFI	CCNGG	7 cut(s)	115, 256, 312, 419, 448, 737, 846
SduI	GDGCHC	2 cut(s)	855, 927
SexAI	ACCWGGT	1 cut(s)	417
SfaNI	GCATC	2 cut(s)	582, 1005
SfiI	GGCCNNNNNGGCC	1 cut(s)	850
SfoI	GGCGCC	1 cut(s)	1264
Sfr274I	CTCGAG	2 cut(s)	161, 995
Sfr303I	CCGCGG	1 cut(s)	976
SfuI	TTCGAA	1 cut(s)	1091
SgrBI	CCGCGG	1 cut(s)	976
SinI	GGWCC	3 cut(s)	124, 363, 1177
SlaI	CTCGAG	2 cut(s)	161, 995
SmiMI	CAYNNNNRTG	1 cut(s)	1160
SmlI	CTYRAG	2 cut(s)	161, 995
SmoI	CTYRAG	2 cut(s)	161, 995
Sse9I	AATT	4 cut(s)	16, 369, 713, 1099
SseBI	AGGCCT	1 cut(s)	752
SspDI	GGCGCC	1 cut(s)	1262
SspMI	CTAG	2 cut(s)	1286, 1394
StuI	AGGCCT	1 cut(s)	752
StyD4I	CCNGG	7 cut(s)	113, 254, 310, 417, 446, 735, 844
TaaI	ACNGT	1 cut(s)	1159
TaiI	ACGT	9 cut(s)	150, 180, 362, 479, 556, 780, 960, 1005, 1323
TaqII	GACCGA	1 cut(s)	380
TasI	AATT	4 cut(s)	16, 369, 713, 1099
TatI	WGTACW	1 cut(s)	1296
TfiI	GAWTC	4 cut(s)	823, 1088, 1380, 1401
Tru1I	TTAA	5 cut(s)	794, 954, 1005, 1140, 1608
Tru9I	TTAA	5 cut(s)	794, 954, 1005, 1140, 1608
TseFI	GTSAC	4 cut(s)	472, 888, 902, 1153
TseI	GCWGC	9 cut(s)	33, 36, 463, 466, 544, 1063, 1270, 1329, 1450
Tsp45I	GTSAC	4 cut(s)	472, 888, 902, 1153
TspDTI	ATGAA	1 cut(s)	586
TspGWI	ACGGA	5 cut(s)	478, 816, 940, 950, 1226
Tth111I	GACNNNGTC	1 cut(s)	224
VpaK11BI	GGWCC	3 cut(s)	124, 363, 1177
XapI	RAATTY	3 cut(s)	369, 713, 1099
XhoI	CTCGAG	2 cut(s)	161, 995
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	1430
XspI	CTAG	2 cut(s)	1286, 1394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.