AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 |
| malus_domestica | MD02G1107900.v1.1 MD15G1227400.v1.1 |
| prunus_persica | Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1 |
| pyrus_communis | pycom02g08670 pycom15g20240 |
| rosa_chinensis | RchiOBHm_Chr2g0096711 |
| rosa_laevigata | RLG00000016664 |
| rosa_multiflora | Rmu_ssc0000215.1_g000063 |
| rosa_roxburghii | Rroxscaffold_2G00145390 |
| rosa_rugosa | Rorug02G0060000 Rorug02G0060100 |
| rosa_samantha | Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100 |
| rosa_wichuraiana | Rw2G008320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1454 |
| AciI | CCGC | 6 cut(s) | 291, 901, 1097, 1334, 1437, 1538 |
| AclWI | GGATC | 4 cut(s) | 580, 1078, 1427, 1529 |
| AcsI | RAATTY | 5 cut(s) | 106, 259, 769, 1004, 1183 |
| AcuI | CTGAAG | 5 cut(s) | 258, 342, 414, 501, 543 |
| AcvI | CACGTG | 1 cut(s) | 1103 |
| AfaI | GTAC | 3 cut(s) | 364, 1012, 1279 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 110, 569 |
| AflII | CTTAAG | 1 cut(s) | 836 |
| AflIII | ACRYGT | 1 cut(s) | 705 |
| AgeI | ACCGGT | 1 cut(s) | 124 |
| AgsI | TTSAA | 5 cut(s) | 616, 799, 829, 1427, 1504 |
| AhlI | ACTAGT | 1 cut(s) | 212 |
| AjiI | CACGTC | 1 cut(s) | 706 |
| AjnI | CCWGG | 4 cut(s) | 358, 399, 1059, 1396 |
| AluBI | AGCT | 7 cut(s) | 377, 590, 749, 841, 1210, 1271, 1499 |
| AluI | AGCT | 7 cut(s) | 377, 590, 749, 841, 1210, 1271, 1499 |
| Alw26I | GTCTC | 2 cut(s) | 128, 461 |
| AlwI | GGATC | 4 cut(s) | 580, 1078, 1427, 1529 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 320, 470 |
| ApeKI | GCWGC | 4 cut(s) | 518, 1064, 1094, 1271 |
| ApoI | RAATTY | 5 cut(s) | 106, 259, 769, 1004, 1183 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1497, 1529 |
| AsiGI | ACCGGT | 1 cut(s) | 124 |
| AspS9I | GGNCC | 2 cut(s) | 122, 1325 |
| AsuHPI | GGTGA | 5 cut(s) | 892, 1157, 1354, 1507, 1552 |
| AvaII | GGWCC | 2 cut(s) | 122, 1325 |
| BbrPI | CACGTG | 1 cut(s) | 1103 |
| BbsI | GAAGAC | 2 cut(s) | 452, 1394 |
| BbvI | GCAGC | 4 cut(s) | 505, 1051, 1081, 1258 |
| BccI | CCATC | 1 cut(s) | 1531 |
| BceAI | ACGGC | 1 cut(s) | 1538 |
| BciT130I | CCWGG | 4 cut(s) | 360, 401, 1061, 1398 |
| BclI | TGATCA | 2 cut(s) | 79, 855 |
| BcoDI | GTCTC | 2 cut(s) | 128, 461 |
| BcuI | ACTAGT | 1 cut(s) | 212 |
| BfaI | CTAG | 2 cut(s) | 213, 986 |
| BfmI | CTRYAG | 1 cut(s) | 1065 |
| BfrI | CTTAAG | 1 cut(s) | 836 |
| BisI | GCNGC | 6 cut(s) | 519, 902, 1065, 1095, 1098, 1272 |
| BlsI | GCNGC | 6 cut(s) | 520, 903, 1066, 1096, 1099, 1273 |
| Bme1390I | CCNGG | 4 cut(s) | 360, 401, 1061, 1398 |
| Bme18I | GGWCC | 2 cut(s) | 122, 1325 |
| BmgBI | CACGTC | 1 cut(s) | 706 |
| BmgT120I | GGNCC | 2 cut(s) | 122, 1325 |
| BmiI | GGNNCC | 2 cut(s) | 552, 664 |
| BmrFI | CCNGG | 4 cut(s) | 360, 401, 1061, 1398 |
| BmrI | ACTGGG | 1 cut(s) | 1146 |
| BmsI | GCATC | 5 cut(s) | 40, 1081, 1227, 1295, 1480 |
| BmuI | ACTGGG | 1 cut(s) | 1146 |
| BpiI | GAAGAC | 2 cut(s) | 452, 1394 |
| BpmI | CTGGAG | 2 cut(s) | 1314, 1479 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1467 |
| BpuEI | CTTGAG | 1 cut(s) | 474 |
| Bsa29I | ATCGAT | 1 cut(s) | 1053 |
| BsaAI | YACGTR | 2 cut(s) | 1103, 1277 |
| BsaI | GGTCTC | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 3 cut(s) | 399, 1484, 1554 |
| BsaWI | WCCGGW | 2 cut(s) | 70, 124 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 110, 569 |
| Bse118I | RCCGGY | 1 cut(s) | 124 |
| Bse1I | ACTGG | 4 cut(s) | 34, 44, 1141, 1462 |
| BseBI | CCWGG | 4 cut(s) | 360, 401, 1061, 1398 |
| BseCI | ATCGAT | 1 cut(s) | 1053 |
| BseDI | CCNNGG | 3 cut(s) | 399, 1484, 1554 |
| BseGI | GGATG | 7 cut(s) | 28, 340, 346, 634, 1096, 1309, 1471 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 110, 569 |
| BseMII | CTCAG | 1 cut(s) | 1458 |
| BseNI | ACTGG | 4 cut(s) | 34, 44, 1141, 1462 |
| BseRI | GAGGAG | 3 cut(s) | 752, 799, 1427 |
| BseXI | GCAGC | 4 cut(s) | 505, 1051, 1081, 1258 |
| BseYI | CCCAGC | 2 cut(s) | 1032, 1439 |
| BsgI | GTGCAG | 3 cut(s) | 1257, 1376, 1550 |
| BshTI | ACCGGT | 1 cut(s) | 124 |
| BshVI | ATCGAT | 1 cut(s) | 1053 |
| BsiSI | CCGG | 4 cut(s) | 71, 125, 497, 570 |
| BslFI | GGGAC | 2 cut(s) | 308, 742 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 110, 569 |
| BsmAI | GTCTC | 2 cut(s) | 128, 461 |
| BsmFI | GGGAC | 2 cut(s) | 308, 742 |
| Bso31I | GGTCTC | 1 cut(s) | 128 |
| Bsp143I | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| Bsp19I | CCATGG | 1 cut(s) | 1484 |
| BspACI | CCGC | 6 cut(s) | 291, 901, 1097, 1334, 1437, 1538 |
| BspCNI | CTCAG | 1 cut(s) | 1459 |
| BspDI | ATCGAT | 1 cut(s) | 1053 |
| BspHI | TCATGA | 1 cut(s) | 753 |
| BspLI | GGNNCC | 2 cut(s) | 552, 664 |
| BspMAI | CTGCAG | 1 cut(s) | 1069 |
| BspPI | GGATC | 4 cut(s) | 580, 1078, 1427, 1529 |
| BspTI | CTTAAG | 1 cut(s) | 836 |
| BspTNI | GGTCTC | 1 cut(s) | 128 |
| BsrFI | RCCGGY | 1 cut(s) | 124 |
| BsrI | ACTGG | 4 cut(s) | 34, 44, 1141, 1462 |
| BssAI | RCCGGY | 1 cut(s) | 124 |
| BssECI | CCNNGG | 3 cut(s) | 399, 1484, 1554 |
| BssMI | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| BssT1I | CCWWGG | 1 cut(s) | 1484 |
| Bst2UI | CCWGG | 4 cut(s) | 360, 401, 1061, 1398 |
| Bst4CI | ACNGT | 5 cut(s) | 234, 472, 538, 946, 1571 |
| Bst6I | CTCTTC | 3 cut(s) | 9, 729, 1033 |
| BstAFI | CTTAAG | 1 cut(s) | 836 |
| BstBAI | YACGTR | 2 cut(s) | 1103, 1277 |
| BstDEI | CTNAG | 2 cut(s) | 1290, 1467 |
| BstDSI | CCRYGG | 2 cut(s) | 1484, 1554 |
| BstEII | GGTNACC | 2 cut(s) | 880, 1558 |
| BstF5I | GGATG | 7 cut(s) | 28, 340, 346, 634, 1096, 1309, 1471 |
| BstKTI | GATC | 9 cut(s) | 82, 575, 858, 1073, 1321, 1350, 1435, 1537, 1609 |
| BstMAI | GTCTC | 2 cut(s) | 128, 461 |
| BstMBI | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1103, 1117 |
| BstNI | CCWGG | 4 cut(s) | 360, 401, 1061, 1398 |
| BstNSI | RCATGY | 3 cut(s) | 685, 939, 1262 |
| BstPI | GGTNACC | 2 cut(s) | 880, 1558 |
| BstSCI | CCNGG | 4 cut(s) | 358, 399, 1059, 1396 |
| BstSFI | CTRYAG | 1 cut(s) | 1065 |
| BstV1I | GCAGC | 4 cut(s) | 505, 1051, 1081, 1258 |
| BstV2I | GAAGAC | 2 cut(s) | 452, 1394 |
| BstX2I | RGATCY | 1 cut(s) | 572 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1338 |
| BstYI | RGATCY | 1 cut(s) | 572 |
| Bsu15I | ATCGAT | 1 cut(s) | 1053 |
| BsuTUI | ATCGAT | 1 cut(s) | 1053 |
| BtgI | CCRYGG | 2 cut(s) | 1484, 1554 |
| BtrI | CACGTC | 1 cut(s) | 706 |
| BtsCI | GGATG | 7 cut(s) | 28, 340, 346, 634, 1096, 1309, 1471 |
| BtsI | GCAGTG | 1 cut(s) | 980 |
| BtsIMutI | CAGTG | 3 cut(s) | 980, 1134, 1159 |
| CaiI | CAGNNNCTG | 2 cut(s) | 320, 470 |
| CciI | TCATGA | 1 cut(s) | 753 |
| Cfr10I | RCCGGY | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 2 cut(s) | 122, 1325 |
| ClaI | ATCGAT | 1 cut(s) | 1053 |
| Csp6I | GTAC | 3 cut(s) | 363, 1011, 1278 |
| CspAI | ACCGGT | 1 cut(s) | 124 |
| CviQI | GTAC | 3 cut(s) | 363, 1011, 1278 |
| DdeI | CTNAG | 2 cut(s) | 1290, 1467 |
| DpnI | GATC | 9 cut(s) | 81, 574, 857, 1072, 1320, 1349, 1434, 1536, 1608 |
| DpnII | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| DraI | TTTAAA | 2 cut(s) | 57, 922 |
| Eam1104I | CTCTTC | 3 cut(s) | 9, 729, 1033 |
| EarI | CTCTTC | 3 cut(s) | 9, 729, 1033 |
| Eco130I | CCWWGG | 1 cut(s) | 1484 |
| Eco31I | GGTCTC | 1 cut(s) | 128 |
| Eco47I | GGWCC | 2 cut(s) | 122, 1325 |
| Eco57I | CTGAAG | 5 cut(s) | 258, 342, 414, 501, 543 |
| Eco72I | CACGTG | 1 cut(s) | 1103 |
| Eco91I | GGTNACC | 2 cut(s) | 880, 1558 |
| EcoO65I | GGTNACC | 2 cut(s) | 880, 1558 |
| EcoRI | GAATTC | 1 cut(s) | 106 |
| EcoRII | CCWGG | 4 cut(s) | 358, 399, 1059, 1396 |
| EcoT14I | CCWWGG | 1 cut(s) | 1484 |
| ErhI | CCWWGG | 1 cut(s) | 1484 |
| FaqI | GGGAC | 2 cut(s) | 308, 742 |
| FauI | CCCGC | 2 cut(s) | 284, 1444 |
| FbaI | TGATCA | 2 cut(s) | 79, 855 |
| Fnu4HI | GCNGC | 6 cut(s) | 519, 902, 1065, 1095, 1098, 1272 |
| FokI | GGATG | 7 cut(s) | 35, 347, 353, 641, 1103, 1316, 1458 |
| Fsp4HI | GCNGC | 6 cut(s) | 519, 902, 1065, 1095, 1098, 1272 |
| FspBI | CTAG | 2 cut(s) | 213, 986 |
| GluI | GCNGC | 6 cut(s) | 519, 902, 1065, 1095, 1098, 1272 |
| GsaI | CCCAGC | 2 cut(s) | 1036, 1443 |
| GsuI | CTGGAG | 2 cut(s) | 1314, 1479 |
| HapII | CCGG | 4 cut(s) | 71, 125, 497, 570 |
| HindIII | AAGCTT | 1 cut(s) | 839 |
| HinfI | GANTC | 5 cut(s) | 116, 142, 506, 593, 722 |
| HpaII | CCGG | 4 cut(s) | 71, 125, 497, 570 |
| HphI | GGTGA | 5 cut(s) | 892, 1157, 1354, 1507, 1552 |
| Hpy166II | GTNNAC | 1 cut(s) | 1226 |
| Hpy188I | TCNGA | 5 cut(s) | 105, 580, 860, 1432, 1606 |
| Hpy188III | TCNNGA | 8 cut(s) | 111, 120, 131, 431, 464, 754, 1475, 1527 |
| Hpy8I | GTNNAC | 1 cut(s) | 1226 |
| HpyAV | CCTTC | 7 cut(s) | 13, 276, 282, 707, 751, 970, 1080 |
| HpyCH4III | ACNGT | 5 cut(s) | 234, 472, 538, 946, 1571 |
| HpyCH4IV | ACGT | 5 cut(s) | 186, 705, 1102, 1129, 1276 |
| HpyCH4V | TGCA | 9 cut(s) | 939, 1067, 1111, 1181, 1192, 1274, 1297, 1357, 1567 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1103, 1117 |
| HpyF3I | CTNAG | 2 cut(s) | 1290, 1467 |
| HpySE526I | ACGT | 5 cut(s) | 186, 705, 1102, 1129, 1276 |
| Ksp22I | TGATCA | 2 cut(s) | 79, 855 |
| Kzo9I | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| LmnI | GCTCC | 4 cut(s) | 499, 739, 786, 1255 |
| Lsp1109I | GCAGC | 4 cut(s) | 505, 1051, 1081, 1258 |
| LweI | GCATC | 5 cut(s) | 40, 1081, 1227, 1295, 1480 |
| MaeI | CTAG | 2 cut(s) | 213, 986 |
| MaeII | ACGT | 5 cut(s) | 186, 705, 1102, 1129, 1276 |
| MalI | GATC | 9 cut(s) | 81, 574, 857, 1072, 1320, 1349, 1434, 1536, 1608 |
| MboI | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| MboII | GAAGA | 9 cut(s) | 26, 452, 536, 567, 628, 746, 1020, 1357, 1394 |
| MfeI | CAATTG | 1 cut(s) | 1298 |
| MflI | RGATCY | 1 cut(s) | 572 |
| MmeI | TCCRAC | 1 cut(s) | 1584 |
| MseI | TTAA | 9 cut(s) | 56, 177, 309, 474, 777, 837, 921, 1212, 1230 |
| MslI | CAYNNNNRTG | 1 cut(s) | 429 |
| MspA1I | CMGCKG | 2 cut(s) | 1334, 1439 |
| MspCI | CTTAAG | 1 cut(s) | 836 |
| MspI | CCGG | 4 cut(s) | 71, 125, 497, 570 |
| MspR9I | CCNGG | 4 cut(s) | 360, 401, 1061, 1398 |
| MunI | CAATTG | 1 cut(s) | 1298 |
| MvaI | CCWGG | 4 cut(s) | 360, 401, 1061, 1398 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1103, 1117 |
| NcoI | CCATGG | 1 cut(s) | 1484 |
| NdeII | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| NlaIV | GGNNCC | 2 cut(s) | 552, 664 |
| NmuCI | GTSAC | 7 cut(s) | 277, 701, 880, 1154, 1492, 1513, 1558 |
| NspI | RCATGY | 3 cut(s) | 685, 939, 1262 |
| PagI | TCATGA | 1 cut(s) | 753 |
| PfeI | GAWTC | 5 cut(s) | 116, 142, 506, 593, 722 |
| PinAI | ACCGGT | 1 cut(s) | 124 |
| PkrI | GCNGC | 6 cut(s) | 520, 903, 1066, 1096, 1099, 1273 |
| PmaCI | CACGTG | 1 cut(s) | 1103 |
| PmlI | CACGTG | 1 cut(s) | 1103 |
| Ppu21I | YACGTR | 2 cut(s) | 1103, 1277 |
| PsiI | TTATAA | 1 cut(s) | 1454 |
| Psp6I | CCWGG | 4 cut(s) | 358, 399, 1059, 1396 |
| PspCI | CACGTG | 1 cut(s) | 1103 |
| PspEI | GGTNACC | 2 cut(s) | 880, 1558 |
| PspFI | CCCAGC | 2 cut(s) | 1032, 1439 |
| PspGI | CCWGG | 4 cut(s) | 358, 399, 1059, 1396 |
| PspN4I | GGNNCC | 2 cut(s) | 552, 664 |
| PspPI | GGNCC | 2 cut(s) | 122, 1325 |
| PstI | CTGCAG | 1 cut(s) | 1069 |
| PstNI | CAGNNNCTG | 2 cut(s) | 320, 470 |
| PsuI | RGATCY | 1 cut(s) | 572 |
| RsaI | GTAC | 3 cut(s) | 364, 1012, 1279 |
| RsaNI | GTAC | 3 cut(s) | 363, 1011, 1278 |
| RseI | CAYNNNNRTG | 1 cut(s) | 429 |
| SaqAI | TTAA | 9 cut(s) | 56, 177, 309, 474, 777, 837, 921, 1212, 1230 |
| SatI | GCNGC | 6 cut(s) | 519, 902, 1065, 1095, 1098, 1272 |
| Sau3AI | GATC | 9 cut(s) | 79, 572, 855, 1070, 1318, 1347, 1432, 1534, 1606 |
| Sau96I | GGNCC | 2 cut(s) | 122, 1325 |
| ScrFI | CCNGG | 4 cut(s) | 360, 401, 1061, 1398 |
| SfaNI | GCATC | 5 cut(s) | 40, 1081, 1227, 1295, 1480 |
| SfcI | CTRYAG | 1 cut(s) | 1065 |
| SinI | GGWCC | 2 cut(s) | 122, 1325 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 429 |
| SmlI | CTYRAG | 2 cut(s) | 489, 836 |
| SmoI | CTYRAG | 2 cut(s) | 489, 836 |
| SpeI | ACTAGT | 1 cut(s) | 212 |
| SsiI | CCGC | 6 cut(s) | 291, 901, 1097, 1334, 1437, 1538 |
| SspMI | CTAG | 2 cut(s) | 213, 986 |
| StyD4I | CCNGG | 4 cut(s) | 358, 399, 1059, 1396 |
| StyI | CCWWGG | 1 cut(s) | 1484 |
| TaaI | ACNGT | 5 cut(s) | 234, 472, 538, 946, 1571 |
| TaiI | ACGT | 5 cut(s) | 189, 708, 1105, 1132, 1279 |
| TaqI | TCGA | 3 cut(s) | 961, 1053, 1078 |
| TauI | GCSGC | 2 cut(s) | 904, 1100 |
| TfiI | GAWTC | 5 cut(s) | 116, 142, 506, 593, 722 |
| Tru1I | TTAA | 9 cut(s) | 56, 177, 309, 474, 777, 837, 921, 1212, 1230 |
| Tru9I | TTAA | 9 cut(s) | 56, 177, 309, 474, 777, 837, 921, 1212, 1230 |
| TscAI | CASTG | 3 cut(s) | 987, 1141, 1159 |
| TseFI | GTSAC | 7 cut(s) | 277, 701, 880, 1154, 1492, 1513, 1558 |
| TseI | GCWGC | 4 cut(s) | 518, 1064, 1094, 1271 |
| Tsp45I | GTSAC | 7 cut(s) | 277, 701, 880, 1154, 1492, 1513, 1558 |
| TspDTI | ATGAA | 9 cut(s) | 39, 357, 645, 726, 742, 770, 939, 1008, 1061 |
| TspRI | CASTG | 3 cut(s) | 987, 1141, 1159 |
| Vha464I | CTTAAG | 1 cut(s) | 836 |
| VpaK11BI | GGWCC | 2 cut(s) | 122, 1325 |
| XapI | RAATTY | 5 cut(s) | 106, 259, 769, 1004, 1183 |
| XceI | RCATGY | 3 cut(s) | 685, 939, 1262 |
| XspI | CTAG | 2 cut(s) | 213, 986 |