Prupe.7G187900_v2.0.a1

AT-rich interactive domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
18096413 .. 18102344
5932 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G187900.1

Sequence Viewer

Length: 1719 bp
ATGAGTGATACTGAAGACAATGAGGAAACTGGGAAAAACGTGCCAGTTGCTGCTGTAGATAATAGGCAACCAGAAAATATTCAAGAAATTGATCATAATAAGCAGAACAATTCTCCTCGTTCTGGAGAATCTGAGCCAGTCCAGGAAACCCCAAATCCTGCTGAAAATGGAGAAGCTCTACCTGATAAGACCGACATTGAAATGACCACTGATGGTAAAAATAATGTAGAACCACAGTCCAATTCACCCCAACCTGATCAAGATTCACCTCCTCCCTCAGTACCAAGAAATGATGATGACCAACAATTAGTCAAGCCAGATACCGAACCCTTGAGTGGCGATGACCAACAATTAGTCAAGCCAGATACCGAACCCTTGAATGGCAATGACCAACAATTAGTCAAGCCAGATACTGAACCCTTGAATGGCGATGACCACCAATTAGTCAAGCCATATACTGAACCCACAGCTGATGCCAAGACGGAAGCCCAGGATTTGCCTCAAAGTAATAATCATGGGTGTAAGGATGGCGACCCTGTTTCCACAAGTCATCCAGAGACTGCTGAACCCACTGTTGGTGTTAAAACTGAAGCTTCTCAAGTTCCCGAGGGTGAGTCTAGTAGTGCTGTTGGAGATACTGTAACAGTGAGTCATAATGAAGATGTTACGCCTCATGCTGGATCTTCTGATAGAAAAGCTGATACTGGGAGTGGAGAAGAATTGAAGCATAATGAAAAAGATATTACTACTCCCAAAAATAATGGAAACCCAAACTCGAAGTGCTTGTTTCTTTTGGATGACAGCCACATGTCTGACGGTAATGATTCTGGGACAGAAGAGGAGCAATCAGCTTTCATGGCGGTGGTGGAAAATTTCTTTAGGGAGAGGAGCATGGAATTTAAACCTCCTAAGTTCTATGGAGAGGGTTTGAATTGCCTTAAGCTTTGGAGAGCTGTGACTAGATTAGGTGGCTATGATAAGGTTACCTCAAGTAAGTTGTGGCGGCAAGTGGGAGAAACCTTTAAACCTCCAAAGACATGCACTACGGTTTCATGGACGTTTCGTGGCTTCTACGAGAAGGCACTCCTAGATTATGAAAGGCATAAATTTGGTACGGAGCCCAGTGTACCAATCTCTTCCCAGCCAGAGCCTATGAATATTGATAACCAGGCTTCAGGATCAGGCAGAGCAAGAAGGGATGCTGCAGCACGTGCCATGCAGGGTTGGCACTCACAACGTATCCTTGGTAATGGTGAAGTCAGTGACCCTATTATAAAGGATAAAAATTCTGCTTCTTTGCAAAAGCGTGAAAAACAGCTTAAAAGCATCGGTTTACTTAAAAGAAAGAAGCCGCCTTACGTGGATCATGTGGTAAAAGCTGCACGTACTAAAGCATCTAAGTCACAATTGGATGCGGATGTGGTTGATCTTGGACCTCCTGCAGATTGGGTGAAGATCAATGTGCAGAGAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCAGGGCTTCTACGTGAGGAGGTGCGCGTTCAGTCAGATCCAGCTGGGAGACTGGTTATAAGTGGAGAACCCGAGCATCCTGATAATCCATGGGGTGTCACACCTTTCAAAAAGGTTGTCACCTTACCATCAAGAATTGATCCACACCAGACATCAGCCGTGGTCACCCTGCACGGACAGTTGTTTGTTCGTGTTCCGTTTGAGCAGTCGGAATAG

Protein Analysis

573

Amino Acids

62.94

Weight (kDa)

4.95

Isoelectric Point (pI)

48.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1274, 1562
AccII CGCG 1 cut(s) 1530
AciI CCGC 4 cut(s) 860, 1003, 1352, 1415
AclWI GGATC 5 cut(s) 688, 1186, 1371, 1535, 1637
AcsI RAATTY 4 cut(s) 871, 896, 1106, 1285
AcuI CTGAAG 3 cut(s) 33, 609, 1158
AcvI CACGTG 1 cut(s) 1211
AfaI GTAC 4 cut(s) 282, 1114, 1128, 1387
AfiI CCNNNNNNNGG 6 cut(s) 122, 335, 380, 425, 575, 677
AflII CTTAAG 1 cut(s) 938
AflIII ACRYGT 1 cut(s) 807
AgsI TTSAA 7 cut(s) 83, 200, 379, 424, 724, 931, 1612
AjnI CCWGG 4 cut(s) 141, 489, 1167, 1504
AjuI GAANNNNNNNTTGG 2 cut(s) 558, 590
Alw26I GTCTC 2 cut(s) 551, 1546
AlwI GGATC 5 cut(s) 688, 1186, 1371, 1535, 1637
AlwNI CAGNNNCTG 3 cut(s) 50, 413, 560
Ama87I CYCGRG 2 cut(s) 605, 1574
ApeKI GCWGC 4 cut(s) 50, 1202, 1205, 1379
ApoI RAATTY 4 cut(s) 871, 896, 1106, 1285
ArsI GACNNNNNNTTYG 2 cut(s) 1605, 1637
Asp700I GAANNNNTTC 1 cut(s) 78
AspLEI GCGC 1 cut(s) 1530
AspS9I GGNCC 1 cut(s) 1433
AsuHPI GGTGA 7 cut(s) 237, 258, 623, 1265, 1462, 1615, 1660
AvaI CYCGRG 2 cut(s) 605, 1574
AvaII GGWCC 1 cut(s) 1433
BanII GRGCYC 1 cut(s) 1122
BarI GAAGNNNNNNTAC 2 cut(s) 1340, 1372
BbrPI CACGTG 1 cut(s) 1211
BbsI GAAGAC 1 cut(s) 21
BbvI GCAGC 4 cut(s) 37, 1189, 1217, 1366
BccI CCATC 3 cut(s) 206, 521, 1639
BceAI ACGGC 1 cut(s) 1646
BciT130I CCWGG 4 cut(s) 143, 491, 1169, 1506
BciVI GTATCC 1 cut(s) 1250
BclI TGATCA 2 cut(s) 91, 256
BcoDI GTCTC 2 cut(s) 551, 1546
BfaI CTAG 3 cut(s) 618, 960, 1088
BfmI CTRYAG 3 cut(s) 54, 1203, 1440
BfrI CTTAAG 1 cut(s) 938
BfuI GTATCC 1 cut(s) 1250
BisI GCNGC 6 cut(s) 51, 1004, 1203, 1206, 1352, 1380
BlsI GCNGC 6 cut(s) 52, 1005, 1204, 1207, 1353, 1381
Bme1390I CCNGG 4 cut(s) 143, 491, 1169, 1506
Bme18I GGWCC 1 cut(s) 1433
BmeT110I CYCGRG 2 cut(s) 605, 1574
BmgT120I GGNCC 1 cut(s) 1433
BmiI GGNNCC 1 cut(s) 1119
BmrFI CCNGG 4 cut(s) 143, 491, 1169, 1506
BmrI ACTGGG 3 cut(s) 39, 714, 1116
BmsI GCATC 6 cut(s) 463, 1189, 1335, 1402, 1403, 1588
BmuI ACTGGG 3 cut(s) 39, 714, 1116
BpiI GAAGAC 1 cut(s) 21
BpmI CTGGAG 1 cut(s) 144
BpuEI CTTGAG 3 cut(s) 352, 582, 973
BsaAI YACGTR 4 cut(s) 1211, 1360, 1385, 1517
BsaJI CCNNGG 6 cut(s) 489, 606, 1243, 1505, 1592, 1662
BsaXI ACNNNNNCTCC 2 cut(s) 624, 654
Bsc4I CCNNNNNNNGG 6 cut(s) 122, 335, 380, 425, 575, 677
Bse1I ACTGG 6 cut(s) 34, 44, 137, 709, 1122, 1560
Bse3DI GCAATG 1 cut(s) 391
BseBI CCWGG 4 cut(s) 143, 491, 1169, 1506
BseDI CCNNGG 6 cut(s) 489, 606, 1243, 1505, 1592, 1662
BseGI GGATG 7 cut(s) 532, 550, 802, 1204, 1417, 1423, 1579
BseLI CCNNNNNNNGG 6 cut(s) 122, 335, 380, 425, 575, 677
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 2 cut(s) 123, 291
BseNI ACTGG 6 cut(s) 34, 44, 137, 709, 1122, 1560
BseRI GAGGAG 5 cut(s) 105, 261, 854, 901, 1535
BseXI GCAGC 4 cut(s) 37, 1189, 1217, 1366
BseYI CCCAGC 2 cut(s) 1140, 1547
BsgI GTGCAG 3 cut(s) 1365, 1484, 1658
Bsh1236I CGCG 1 cut(s) 1530
BsiHKCI CYCGRG 2 cut(s) 605, 1574
BslFI GGGAC 1 cut(s) 844
BslI CCNNNNNNNGG 6 cut(s) 122, 335, 380, 425, 575, 677
BsmAI GTCTC 2 cut(s) 551, 1546
BsmFI GGGAC 1 cut(s) 844
BsoBI CYCGRG 2 cut(s) 605, 1574
Bsp1286I GDGCHC 1 cut(s) 1122
Bsp143I GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
Bsp19I CCATGG 1 cut(s) 1592
BspACI CCGC 4 cut(s) 860, 1003, 1352, 1415
BspCNI CTCAG 2 cut(s) 124, 290
BspFNI CGCG 1 cut(s) 1530
BspLI GGNNCC 1 cut(s) 1119
BspMAI CTGCAG 2 cut(s) 1207, 1444
BspPI GGATC 5 cut(s) 688, 1186, 1371, 1535, 1637
BspTI CTTAAG 1 cut(s) 938
BsrDI GCAATG 1 cut(s) 391
BsrI ACTGG 6 cut(s) 34, 44, 137, 709, 1122, 1560
BssECI CCNNGG 6 cut(s) 489, 606, 1243, 1505, 1592, 1662
BssMI GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
BssT1I CCWWGG 2 cut(s) 1243, 1592
Bst2UI CCWGG 4 cut(s) 143, 491, 1169, 1506
Bst4CI ACNGT 7 cut(s) 237, 574, 640, 646, 818, 1048, 1683
Bst6I CTCTTC 2 cut(s) 831, 1141
BstAFI CTTAAG 1 cut(s) 938
BstAPI GCANNNNNTGC 1 cut(s) 1211
BstBAI YACGTR 4 cut(s) 1211, 1360, 1385, 1517
BstDEI CTNAG 4 cut(s) 132, 277, 909, 1398
BstDSI CCRYGG 2 cut(s) 1592, 1662
BstEII GGTNACC 2 cut(s) 982, 1666
BstF5I GGATG 7 cut(s) 532, 550, 802, 1204, 1417, 1423, 1579
BstFNI CGCG 1 cut(s) 1530
BstHHI GCGC 1 cut(s) 1530
BstKTI GATC 9 cut(s) 94, 259, 683, 1181, 1366, 1429, 1458, 1543, 1645
BstMAI GTCTC 2 cut(s) 551, 1546
BstMBI GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
BstMWI GCNNNNNNNGC 3 cut(s) 857, 1211, 1225
BstNI CCWGG 4 cut(s) 143, 491, 1169, 1506
BstNSI RCATGY 2 cut(s) 811, 1041
BstPI GGTNACC 2 cut(s) 982, 1666
BstSCI CCNGG 4 cut(s) 141, 489, 1167, 1504
BstSFI CTRYAG 3 cut(s) 54, 1203, 1440
BstUI CGCG 1 cut(s) 1530
BstV1I GCAGC 4 cut(s) 37, 1189, 1217, 1366
BstV2I GAAGAC 1 cut(s) 21
BstX2I RGATCY 2 cut(s) 680, 1540
BstYI RGATCY 2 cut(s) 680, 1540
BsuI GTATCC 1 cut(s) 1250
BtgI CCRYGG 2 cut(s) 1592, 1662
BtgZI GCGATG 2 cut(s) 354, 444
BtsCI GGATG 7 cut(s) 532, 550, 802, 1204, 1417, 1423, 1579
BtsIMutI CAGTG 5 cut(s) 207, 570, 651, 1129, 1267
CaiI CAGNNNCTG 3 cut(s) 50, 413, 560
CfoI GCGC 1 cut(s) 1530
Cfr13I GGNCC 1 cut(s) 1433
Csp6I GTAC 4 cut(s) 281, 1113, 1127, 1386
CviQI GTAC 4 cut(s) 281, 1113, 1127, 1386
DdeI CTNAG 4 cut(s) 132, 277, 909, 1398
DpnI GATC 9 cut(s) 93, 258, 682, 1180, 1365, 1428, 1457, 1542, 1644
DpnII GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
DraI TTTAAA 2 cut(s) 901, 1024
Eam1104I CTCTTC 2 cut(s) 831, 1141
EarI CTCTTC 2 cut(s) 831, 1141
Eco130I CCWWGG 2 cut(s) 1243, 1592
Eco24I GRGCYC 1 cut(s) 1122
Eco47I GGWCC 1 cut(s) 1433
Eco57I CTGAAG 3 cut(s) 33, 609, 1158
Eco72I CACGTG 1 cut(s) 1211
Eco88I CYCGRG 2 cut(s) 605, 1574
Eco91I GGTNACC 2 cut(s) 982, 1666
EcoO65I GGTNACC 2 cut(s) 982, 1666
EcoRII CCWGG 4 cut(s) 141, 489, 1167, 1504
EcoT14I CCWWGG 2 cut(s) 1243, 1592
EcoT38I GRGCYC 1 cut(s) 1122
ErhI CCWWGG 2 cut(s) 1243, 1592
FaqI GGGAC 1 cut(s) 844
FbaI TGATCA 2 cut(s) 91, 256
Fnu4HI GCNGC 6 cut(s) 51, 1004, 1203, 1206, 1352, 1380
FokI GGATG 7 cut(s) 537, 539, 809, 1211, 1424, 1430, 1566
FriOI GRGCYC 1 cut(s) 1122
Fsp4HI GCNGC 6 cut(s) 51, 1004, 1203, 1206, 1352, 1380
FspBI CTAG 3 cut(s) 618, 960, 1088
GlaI GCGC 1 cut(s) 1529
GluI GCNGC 6 cut(s) 51, 1004, 1203, 1206, 1352, 1380
GsaI CCCAGC 2 cut(s) 1144, 1551
GsuI CTGGAG 1 cut(s) 144
HhaI GCGC 1 cut(s) 1530
Hin6I GCGC 1 cut(s) 1528
HinP1I GCGC 1 cut(s) 1528
HindIII AAGCTT 2 cut(s) 591, 941
HinfI GANTC 5 cut(s) 128, 263, 614, 649, 824
HphI GGTGA 7 cut(s) 237, 258, 623, 1265, 1462, 1615, 1660
Hpy166II GTNNAC 2 cut(s) 1127, 1334
Hpy188I TCNGA 5 cut(s) 133, 688, 814, 1540, 1714
Hpy188III TCNNGA 8 cut(s) 83, 123, 260, 554, 605, 1176, 1583, 1635
Hpy8I GTNNAC 2 cut(s) 1127, 1334
HpyAV CCTTC 2 cut(s) 1072, 1188
HpyCH4III ACNGT 7 cut(s) 237, 574, 640, 646, 818, 1048, 1683
HpyCH4IV ACGT 7 cut(s) 39, 1058, 1210, 1237, 1359, 1384, 1516
HpyCH4V TGCA 8 cut(s) 1041, 1205, 1219, 1300, 1382, 1442, 1465, 1675
HpyF10VI GCNNNNNNNGC 3 cut(s) 857, 1211, 1225
HpyF3I CTNAG 4 cut(s) 132, 277, 909, 1398
HpySE526I ACGT 7 cut(s) 39, 1058, 1210, 1237, 1359, 1384, 1516
HspAI GCGC 1 cut(s) 1528
Ksp22I TGATCA 2 cut(s) 91, 256
Kzo9I GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
LmnI GCTCC 3 cut(s) 841, 888, 1117
Lsp1109I GCAGC 4 cut(s) 37, 1189, 1217, 1366
LweI GCATC 6 cut(s) 463, 1189, 1335, 1402, 1403, 1588
MaeI CTAG 3 cut(s) 618, 960, 1088
MaeII ACGT 7 cut(s) 39, 1058, 1210, 1237, 1359, 1384, 1516
MaeIII GTNAC 9 cut(s) 640, 664, 955, 982, 1262, 1401, 1600, 1621, 1666
MalI GATC 9 cut(s) 93, 258, 682, 1180, 1365, 1428, 1457, 1542, 1644
MboI GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
MboII GAAGA 7 cut(s) 26, 671, 675, 728, 848, 1128, 1465
MfeI CAATTG 1 cut(s) 1406
MflI RGATCY 2 cut(s) 680, 1540
MhlI GDGCHC 1 cut(s) 1122
MlyI GAGTC 2 cut(s) 623, 658
MmeI TCCRAC 2 cut(s) 610, 1692
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 6 cut(s) 582, 900, 939, 1023, 1320, 1338
MslI CAYNNNNRTG 2 cut(s) 200, 860
MspA1I CMGCKG 2 cut(s) 470, 1547
MspCI CTTAAG 1 cut(s) 938
MspR9I CCNGG 4 cut(s) 143, 491, 1169, 1506
MunI CAATTG 1 cut(s) 1406
MvaI CCWGG 4 cut(s) 143, 491, 1169, 1506
MvnI CGCG 1 cut(s) 1530
MwoI GCNNNNNNNGC 3 cut(s) 857, 1211, 1225
NcoI CCATGG 1 cut(s) 1592
NdeII GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
NlaIV GGNNCC 1 cut(s) 1119
NmuCI GTSAC 6 cut(s) 955, 1262, 1401, 1600, 1621, 1666
NspI RCATGY 2 cut(s) 811, 1041
PciI ACATGT 1 cut(s) 807
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 128, 263, 824
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 6 cut(s) 52, 1005, 1204, 1207, 1353, 1381
PleI GAGTC 2 cut(s) 622, 657
PmaCI CACGTG 1 cut(s) 1211
PmlI CACGTG 1 cut(s) 1211
PpsI GAGTC 2 cut(s) 622, 657
Ppu21I YACGTR 4 cut(s) 1211, 1360, 1385, 1517
PscI ACATGT 1 cut(s) 807
PsiI TTATAA 2 cut(s) 1274, 1562
Psp6I CCWGG 4 cut(s) 141, 489, 1167, 1504
PspCI CACGTG 1 cut(s) 1211
PspEI GGTNACC 2 cut(s) 982, 1666
PspFI CCCAGC 2 cut(s) 1140, 1547
PspGI CCWGG 4 cut(s) 141, 489, 1167, 1504
PspN4I GGNNCC 1 cut(s) 1119
PspPI GGNCC 1 cut(s) 1433
PstI CTGCAG 2 cut(s) 1207, 1444
PstNI CAGNNNCTG 3 cut(s) 50, 413, 560
PsuI RGATCY 2 cut(s) 680, 1540
PvuII CAGCTG 2 cut(s) 470, 1547
RsaI GTAC 4 cut(s) 282, 1114, 1128, 1387
RsaNI GTAC 4 cut(s) 281, 1113, 1127, 1386
RseI CAYNNNNRTG 2 cut(s) 200, 860
SaqAI TTAA 6 cut(s) 582, 900, 939, 1023, 1320, 1338
SatI GCNGC 6 cut(s) 51, 1004, 1203, 1206, 1352, 1380
Sau3AI GATC 9 cut(s) 91, 256, 680, 1178, 1363, 1426, 1455, 1540, 1642
Sau96I GGNCC 1 cut(s) 1433
SchI GAGTC 2 cut(s) 623, 658
ScrFI CCNGG 4 cut(s) 143, 491, 1169, 1506
SduI GDGCHC 1 cut(s) 1122
SfaNI GCATC 6 cut(s) 463, 1189, 1335, 1402, 1403, 1588
SfcI CTRYAG 3 cut(s) 54, 1203, 1440
SinI GGWCC 1 cut(s) 1433
SmiMI CAYNNNNRTG 2 cut(s) 200, 860
SmlI CTYRAG 4 cut(s) 331, 597, 938, 988
SmoI CTYRAG 4 cut(s) 331, 597, 938, 988
SsiI CCGC 4 cut(s) 860, 1003, 1352, 1415
SspI AATATT 2 cut(s) 79, 1159
SspMI CTAG 3 cut(s) 618, 960, 1088
StyD4I CCNGG 4 cut(s) 141, 489, 1167, 1504
StyI CCWWGG 2 cut(s) 1243, 1592
TaaI ACNGT 7 cut(s) 237, 574, 640, 646, 818, 1048, 1683
TaiI ACGT 7 cut(s) 42, 1061, 1213, 1240, 1362, 1387, 1519
TaqI TCGA 1 cut(s) 776
TaqII GACCGA 1 cut(s) 206
TauI GCSGC 2 cut(s) 1006, 1354
TfiI GAWTC 3 cut(s) 128, 263, 824
Tru1I TTAA 6 cut(s) 582, 900, 939, 1023, 1320, 1338
Tru9I TTAA 6 cut(s) 582, 900, 939, 1023, 1320, 1338
TscAI CASTG 5 cut(s) 214, 577, 651, 1129, 1267
TseFI GTSAC 6 cut(s) 955, 1262, 1401, 1600, 1621, 1666
TseI GCWGC 4 cut(s) 50, 1202, 1205, 1379
Tsp45I GTSAC 6 cut(s) 955, 1262, 1401, 1600, 1621, 1666
TspDTI ATGAA 6 cut(s) 672, 747, 844, 1041, 1110, 1169
TspGWI ACGGA 4 cut(s) 497, 1130, 1689, 1692
TspRI CASTG 5 cut(s) 214, 577, 651, 1129, 1267
Vha464I CTTAAG 1 cut(s) 938
VpaK11BI GGWCC 1 cut(s) 1433
XapI RAATTY 4 cut(s) 871, 896, 1106, 1285
XceI RCATGY 2 cut(s) 811, 1041
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 3 cut(s) 618, 960, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.