AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 |
| malus_domestica | MD02G1107900.v1.1 MD15G1227400.v1.1 |
| prunus_persica | Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1 |
| pyrus_communis | pycom02g08670 pycom15g20240 |
| rosa_chinensis | RchiOBHm_Chr2g0096711 |
| rosa_laevigata | RLG00000016664 |
| rosa_multiflora | Rmu_ssc0000215.1_g000063 |
| rosa_roxburghii | Rroxscaffold_2G00145390 |
| rosa_rugosa | Rorug02G0060000 Rorug02G0060100 |
| rosa_samantha | Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100 |
| rosa_wichuraiana | Rw2G008320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1499 |
| AciI | CCGC | 6 cut(s) | 324, 946, 1064, 1142, 1379, 1489 |
| AclWI | GGATC | 4 cut(s) | 625, 1123, 1472, 1574 |
| AcsI | RAATTY | 5 cut(s) | 142, 292, 814, 1049, 1228 |
| AcuI | CTGAAG | 6 cut(s) | 69, 291, 375, 447, 546, 588 |
| AcvI | CACGTG | 1 cut(s) | 1148 |
| AfaI | GTAC | 3 cut(s) | 397, 1057, 1324 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 146, 614 |
| AflII | CTTAAG | 1 cut(s) | 881 |
| AflIII | ACRYGT | 1 cut(s) | 750 |
| AgeI | ACCGGT | 1 cut(s) | 160 |
| AgsI | TTSAA | 5 cut(s) | 661, 844, 874, 1472, 1549 |
| AhlI | ACTAGT | 1 cut(s) | 245 |
| AjnI | CCWGG | 4 cut(s) | 391, 432, 1104, 1441 |
| AluBI | AGCT | 9 cut(s) | 410, 524, 635, 794, 886, 1255, 1316, 1484, 1544 |
| AluI | AGCT | 9 cut(s) | 410, 524, 635, 794, 886, 1255, 1316, 1484, 1544 |
| Alw26I | GTCTC | 2 cut(s) | 164, 494 |
| AlwI | GGATC | 4 cut(s) | 625, 1123, 1472, 1574 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 353 |
| Ama87I | CYCGRG | 1 cut(s) | 497 |
| ApeKI | GCWGC | 5 cut(s) | 560, 563, 1109, 1139, 1316 |
| ApoI | RAATTY | 5 cut(s) | 142, 292, 814, 1049, 1228 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 324, 356, 1542, 1574 |
| AsiGI | ACCGGT | 1 cut(s) | 160 |
| AspS9I | GGNCC | 2 cut(s) | 158, 1370 |
| AsuHPI | GGTGA | 5 cut(s) | 937, 1202, 1399, 1552, 1597 |
| AvaI | CYCGRG | 1 cut(s) | 497 |
| AvaII | GGWCC | 2 cut(s) | 158, 1370 |
| BbrPI | CACGTG | 1 cut(s) | 1148 |
| BbsI | GAAGAC | 1 cut(s) | 485 |
| BbvI | GCAGC | 5 cut(s) | 547, 550, 1096, 1126, 1303 |
| BccI | CCATC | 1 cut(s) | 1576 |
| BceAI | ACGGC | 1 cut(s) | 1583 |
| BciT130I | CCWGG | 4 cut(s) | 393, 434, 1106, 1443 |
| BclI | TGATCA | 2 cut(s) | 115, 900 |
| BcoDI | GTCTC | 2 cut(s) | 164, 494 |
| BcuI | ACTAGT | 1 cut(s) | 245 |
| BfaI | CTAG | 2 cut(s) | 246, 1031 |
| BfmI | CTRYAG | 1 cut(s) | 1110 |
| BfrI | CTTAAG | 1 cut(s) | 881 |
| BisI | GCNGC | 7 cut(s) | 561, 564, 947, 1110, 1140, 1143, 1317 |
| BlsI | GCNGC | 7 cut(s) | 562, 565, 948, 1111, 1141, 1144, 1318 |
| Bme1390I | CCNGG | 4 cut(s) | 393, 434, 1106, 1443 |
| Bme18I | GGWCC | 2 cut(s) | 158, 1370 |
| BmeT110I | CYCGRG | 1 cut(s) | 497 |
| BmgT120I | GGNCC | 2 cut(s) | 158, 1370 |
| BmiI | GGNNCC | 2 cut(s) | 597, 709 |
| BmrFI | CCNGG | 4 cut(s) | 393, 434, 1106, 1443 |
| BmrI | ACTGGG | 1 cut(s) | 1191 |
| BmsI | GCATC | 5 cut(s) | 76, 1126, 1272, 1340, 1525 |
| BmuI | ACTGGG | 1 cut(s) | 1191 |
| BpiI | GAAGAC | 1 cut(s) | 485 |
| BpmI | CTGGAG | 3 cut(s) | 168, 1359, 1524 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 1 cut(s) | 519 |
| BsaAI | YACGTR | 2 cut(s) | 1148, 1322 |
| BsaI | GGTCTC | 1 cut(s) | 164 |
| BsaJI | CCNNGG | 4 cut(s) | 432, 1442, 1529, 1599 |
| BsaWI | WCCGGW | 2 cut(s) | 106, 160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 146, 614 |
| Bse118I | RCCGGY | 1 cut(s) | 160 |
| Bse1I | ACTGG | 3 cut(s) | 80, 1186, 1507 |
| BseBI | CCWGG | 4 cut(s) | 393, 434, 1106, 1443 |
| BseDI | CCNNGG | 4 cut(s) | 432, 1442, 1529, 1599 |
| BseGI | GGATG | 7 cut(s) | 64, 373, 379, 679, 1141, 1354, 1516 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 146, 614 |
| BseMII | CTCAG | 1 cut(s) | 1503 |
| BseNI | ACTGG | 3 cut(s) | 80, 1186, 1507 |
| BseRI | GAGGAG | 3 cut(s) | 797, 844, 1472 |
| BseXI | GCAGC | 5 cut(s) | 547, 550, 1096, 1126, 1303 |
| BseYI | CCCAGC | 2 cut(s) | 1077, 1484 |
| BsgI | GTGCAG | 3 cut(s) | 1302, 1421, 1595 |
| BshTI | ACCGGT | 1 cut(s) | 160 |
| BsiHKCI | CYCGRG | 1 cut(s) | 497 |
| BsiSI | CCGG | 4 cut(s) | 107, 161, 542, 615 |
| BslFI | GGGAC | 2 cut(s) | 341, 787 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 146, 614 |
| BsmAI | GTCTC | 2 cut(s) | 164, 494 |
| BsmFI | GGGAC | 2 cut(s) | 341, 787 |
| Bso31I | GGTCTC | 1 cut(s) | 164 |
| BsoBI | CYCGRG | 1 cut(s) | 497 |
| Bsp143I | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| Bsp19I | CCATGG | 1 cut(s) | 1529 |
| BspACI | CCGC | 6 cut(s) | 324, 946, 1064, 1142, 1379, 1489 |
| BspCNI | CTCAG | 1 cut(s) | 1504 |
| BspHI | TCATGA | 1 cut(s) | 798 |
| BspLI | GGNNCC | 2 cut(s) | 597, 709 |
| BspMAI | CTGCAG | 1 cut(s) | 1114 |
| BspPI | GGATC | 4 cut(s) | 625, 1123, 1472, 1574 |
| BspTI | CTTAAG | 1 cut(s) | 881 |
| BspTNI | GGTCTC | 1 cut(s) | 164 |
| BsrFI | RCCGGY | 1 cut(s) | 160 |
| BsrI | ACTGG | 3 cut(s) | 80, 1186, 1507 |
| BssAI | RCCGGY | 1 cut(s) | 160 |
| BssECI | CCNNGG | 4 cut(s) | 432, 1442, 1529, 1599 |
| BssMI | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| BssT1I | CCWWGG | 1 cut(s) | 1529 |
| Bst2UI | CCWGG | 4 cut(s) | 393, 434, 1106, 1443 |
| Bst4CI | ACNGT | 6 cut(s) | 267, 505, 517, 583, 991, 1616 |
| Bst6I | CTCTTC | 3 cut(s) | 45, 774, 1078 |
| BstAFI | CTTAAG | 1 cut(s) | 881 |
| BstBAI | YACGTR | 2 cut(s) | 1148, 1322 |
| BstDEI | CTNAG | 3 cut(s) | 29, 1335, 1512 |
| BstDSI | CCRYGG | 2 cut(s) | 1529, 1599 |
| BstEII | GGTNACC | 2 cut(s) | 925, 1603 |
| BstF5I | GGATG | 7 cut(s) | 64, 373, 379, 679, 1141, 1354, 1516 |
| BstKTI | GATC | 9 cut(s) | 118, 620, 903, 1118, 1366, 1395, 1480, 1582, 1654 |
| BstMAI | GTCTC | 2 cut(s) | 164, 494 |
| BstMBI | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1148, 1162 |
| BstNI | CCWGG | 4 cut(s) | 393, 434, 1106, 1443 |
| BstNSI | RCATGY | 4 cut(s) | 730, 754, 984, 1307 |
| BstPI | GGTNACC | 2 cut(s) | 925, 1603 |
| BstSCI | CCNGG | 4 cut(s) | 391, 432, 1104, 1441 |
| BstSFI | CTRYAG | 1 cut(s) | 1110 |
| BstV1I | GCAGC | 5 cut(s) | 547, 550, 1096, 1126, 1303 |
| BstV2I | GAAGAC | 1 cut(s) | 485 |
| BstX2I | RGATCY | 1 cut(s) | 617 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1383 |
| BstYI | RGATCY | 1 cut(s) | 617 |
| BtgI | CCRYGG | 2 cut(s) | 1529, 1599 |
| BtsCI | GGATG | 7 cut(s) | 64, 373, 379, 679, 1141, 1354, 1516 |
| BtsIMutI | CAGTG | 2 cut(s) | 1179, 1204 |
| CaiI | CAGNNNCTG | 1 cut(s) | 353 |
| CciI | TCATGA | 1 cut(s) | 798 |
| Cfr10I | RCCGGY | 1 cut(s) | 160 |
| Cfr13I | GGNCC | 2 cut(s) | 158, 1370 |
| Csp6I | GTAC | 3 cut(s) | 396, 1056, 1323 |
| CspAI | ACCGGT | 1 cut(s) | 160 |
| CviQI | GTAC | 3 cut(s) | 396, 1056, 1323 |
| DdeI | CTNAG | 3 cut(s) | 29, 1335, 1512 |
| DpnI | GATC | 9 cut(s) | 117, 619, 902, 1117, 1365, 1394, 1479, 1581, 1653 |
| DpnII | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| DraI | TTTAAA | 1 cut(s) | 93 |
| Eam1104I | CTCTTC | 3 cut(s) | 45, 774, 1078 |
| EarI | CTCTTC | 3 cut(s) | 45, 774, 1078 |
| Eco130I | CCWWGG | 1 cut(s) | 1529 |
| Eco31I | GGTCTC | 1 cut(s) | 164 |
| Eco47I | GGWCC | 2 cut(s) | 158, 1370 |
| Eco57I | CTGAAG | 6 cut(s) | 69, 291, 375, 447, 546, 588 |
| Eco72I | CACGTG | 1 cut(s) | 1148 |
| Eco88I | CYCGRG | 1 cut(s) | 497 |
| Eco91I | GGTNACC | 2 cut(s) | 925, 1603 |
| EcoO65I | GGTNACC | 2 cut(s) | 925, 1603 |
| EcoRI | GAATTC | 1 cut(s) | 142 |
| EcoRII | CCWGG | 4 cut(s) | 391, 432, 1104, 1441 |
| EcoT14I | CCWWGG | 1 cut(s) | 1529 |
| ErhI | CCWWGG | 1 cut(s) | 1529 |
| FaqI | GGGAC | 2 cut(s) | 341, 787 |
| FauI | CCCGC | 1 cut(s) | 317 |
| FbaI | TGATCA | 2 cut(s) | 115, 900 |
| Fnu4HI | GCNGC | 7 cut(s) | 561, 564, 947, 1110, 1140, 1143, 1317 |
| FokI | GGATG | 7 cut(s) | 71, 380, 386, 686, 1148, 1361, 1503 |
| Fsp4HI | GCNGC | 7 cut(s) | 561, 564, 947, 1110, 1140, 1143, 1317 |
| FspBI | CTAG | 2 cut(s) | 246, 1031 |
| GluI | GCNGC | 7 cut(s) | 561, 564, 947, 1110, 1140, 1143, 1317 |
| GsaI | CCCAGC | 2 cut(s) | 1081, 1488 |
| GsuI | CTGGAG | 3 cut(s) | 168, 1359, 1524 |
| HapII | CCGG | 4 cut(s) | 107, 161, 542, 615 |
| HindIII | AAGCTT | 1 cut(s) | 884 |
| HinfI | GANTC | 5 cut(s) | 152, 178, 551, 638, 767 |
| HpaII | CCGG | 4 cut(s) | 107, 161, 542, 615 |
| HphI | GGTGA | 5 cut(s) | 937, 1202, 1399, 1552, 1597 |
| Hpy166II | GTNNAC | 2 cut(s) | 15, 1271 |
| Hpy188I | TCNGA | 5 cut(s) | 141, 852, 905, 1477, 1651 |
| Hpy188III | TCNNGA | 9 cut(s) | 147, 156, 167, 464, 497, 499, 799, 1520, 1572 |
| Hpy8I | GTNNAC | 2 cut(s) | 15, 1271 |
| HpyAV | CCTTC | 6 cut(s) | 49, 309, 752, 796, 1015, 1125 |
| HpyCH4III | ACNGT | 6 cut(s) | 267, 505, 517, 583, 991, 1616 |
| HpyCH4IV | ACGT | 4 cut(s) | 219, 1147, 1174, 1321 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1148, 1162 |
| HpyF3I | CTNAG | 3 cut(s) | 29, 1335, 1512 |
| HpySE526I | ACGT | 4 cut(s) | 219, 1147, 1174, 1321 |
| Ksp22I | TGATCA | 2 cut(s) | 115, 900 |
| Kzo9I | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| LmnI | GCTCC | 4 cut(s) | 544, 784, 831, 1300 |
| Lsp1109I | GCAGC | 5 cut(s) | 547, 550, 1096, 1126, 1303 |
| LweI | GCATC | 5 cut(s) | 76, 1126, 1272, 1340, 1525 |
| MaeI | CTAG | 2 cut(s) | 246, 1031 |
| MaeII | ACGT | 4 cut(s) | 219, 1147, 1174, 1321 |
| MaeIII | GTNAC | 9 cut(s) | 310, 529, 577, 601, 925, 1199, 1537, 1558, 1603 |
| MalI | GATC | 9 cut(s) | 117, 619, 902, 1117, 1365, 1394, 1479, 1581, 1653 |
| MboI | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| MfeI | CAATTG | 1 cut(s) | 1343 |
| MflI | RGATCY | 1 cut(s) | 617 |
| MmeI | TCCRAC | 1 cut(s) | 1629 |
| MseI | TTAA | 8 cut(s) | 92, 210, 507, 519, 822, 882, 1257, 1275 |
| MslI | CAYNNNNRTG | 2 cut(s) | 462, 1242 |
| MspA1I | CMGCKG | 2 cut(s) | 1379, 1484 |
| MspCI | CTTAAG | 1 cut(s) | 881 |
| MspI | CCGG | 4 cut(s) | 107, 161, 542, 615 |
| MspR9I | CCNGG | 4 cut(s) | 393, 434, 1106, 1443 |
| MunI | CAATTG | 1 cut(s) | 1343 |
| MvaI | CCWGG | 4 cut(s) | 393, 434, 1106, 1443 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1148, 1162 |
| NcoI | CCATGG | 1 cut(s) | 1529 |
| NdeII | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| NlaIV | GGNNCC | 2 cut(s) | 597, 709 |
| NmuCI | GTSAC | 6 cut(s) | 310, 925, 1199, 1537, 1558, 1603 |
| NspI | RCATGY | 4 cut(s) | 730, 754, 984, 1307 |
| PaeR7I | CTCGAG | 1 cut(s) | 497 |
| PagI | TCATGA | 1 cut(s) | 798 |
| PciI | ACATGT | 1 cut(s) | 750 |
| PfeI | GAWTC | 5 cut(s) | 152, 178, 551, 638, 767 |
| PinAI | ACCGGT | 1 cut(s) | 160 |
| PkrI | GCNGC | 7 cut(s) | 562, 565, 948, 1111, 1141, 1144, 1318 |
| PmaCI | CACGTG | 1 cut(s) | 1148 |
| PmlI | CACGTG | 1 cut(s) | 1148 |
| Ppu21I | YACGTR | 2 cut(s) | 1148, 1322 |
| PscI | ACATGT | 1 cut(s) | 750 |
| PsiI | TTATAA | 1 cut(s) | 1499 |
| Psp6I | CCWGG | 4 cut(s) | 391, 432, 1104, 1441 |
| PspCI | CACGTG | 1 cut(s) | 1148 |
| PspEI | GGTNACC | 2 cut(s) | 925, 1603 |
| PspFI | CCCAGC | 2 cut(s) | 1077, 1484 |
| PspGI | CCWGG | 4 cut(s) | 391, 432, 1104, 1441 |
| PspN4I | GGNNCC | 2 cut(s) | 597, 709 |
| PspPI | GGNCC | 2 cut(s) | 158, 1370 |
| PstI | CTGCAG | 1 cut(s) | 1114 |
| PstNI | CAGNNNCTG | 1 cut(s) | 353 |
| PsuI | RGATCY | 1 cut(s) | 617 |
| PvuII | CAGCTG | 1 cut(s) | 1484 |
| RsaI | GTAC | 3 cut(s) | 397, 1057, 1324 |
| RsaNI | GTAC | 3 cut(s) | 396, 1056, 1323 |
| RseI | CAYNNNNRTG | 2 cut(s) | 462, 1242 |
| SaqAI | TTAA | 8 cut(s) | 92, 210, 507, 519, 822, 882, 1257, 1275 |
| SatI | GCNGC | 7 cut(s) | 561, 564, 947, 1110, 1140, 1143, 1317 |
| Sau3AI | GATC | 9 cut(s) | 115, 617, 900, 1115, 1363, 1392, 1477, 1579, 1651 |
| Sau96I | GGNCC | 2 cut(s) | 158, 1370 |
| ScrFI | CCNGG | 4 cut(s) | 393, 434, 1106, 1443 |
| SfaNI | GCATC | 5 cut(s) | 76, 1126, 1272, 1340, 1525 |
| SfcI | CTRYAG | 1 cut(s) | 1110 |
| Sfr274I | CTCGAG | 1 cut(s) | 497 |
| SinI | GGWCC | 2 cut(s) | 158, 1370 |
| SlaI | CTCGAG | 1 cut(s) | 497 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 462, 1242 |
| SmlI | CTYRAG | 3 cut(s) | 497, 534, 881 |
| SmoI | CTYRAG | 3 cut(s) | 497, 534, 881 |
| SpeI | ACTAGT | 1 cut(s) | 245 |
| SsiI | CCGC | 6 cut(s) | 324, 946, 1064, 1142, 1379, 1489 |
| SspMI | CTAG | 2 cut(s) | 246, 1031 |
| StyD4I | CCNGG | 4 cut(s) | 391, 432, 1104, 1441 |
| StyI | CCWWGG | 1 cut(s) | 1529 |
| TaaI | ACNGT | 6 cut(s) | 267, 505, 517, 583, 991, 1616 |
| TaiI | ACGT | 4 cut(s) | 222, 1150, 1177, 1324 |
| TaqI | TCGA | 3 cut(s) | 498, 1006, 1123 |
| TauI | GCSGC | 2 cut(s) | 949, 1145 |
| TfiI | GAWTC | 5 cut(s) | 152, 178, 551, 638, 767 |
| Tru1I | TTAA | 8 cut(s) | 92, 210, 507, 519, 822, 882, 1257, 1275 |
| Tru9I | TTAA | 8 cut(s) | 92, 210, 507, 519, 822, 882, 1257, 1275 |
| TscAI | CASTG | 2 cut(s) | 1186, 1204 |
| TseFI | GTSAC | 6 cut(s) | 310, 925, 1199, 1537, 1558, 1603 |
| TseI | GCWGC | 5 cut(s) | 560, 563, 1109, 1139, 1316 |
| Tsp45I | GTSAC | 6 cut(s) | 310, 925, 1199, 1537, 1558, 1603 |
| TspDTI | ATGAA | 9 cut(s) | 75, 390, 690, 771, 787, 815, 984, 1053, 1106 |
| TspRI | CASTG | 2 cut(s) | 1186, 1204 |
| Vha464I | CTTAAG | 1 cut(s) | 881 |
| VpaK11BI | GGWCC | 2 cut(s) | 158, 1370 |
| XapI | RAATTY | 5 cut(s) | 142, 292, 814, 1049, 1228 |
| XceI | RCATGY | 4 cut(s) | 730, 754, 984, 1307 |
| XhoI | CTCGAG | 1 cut(s) | 497 |
| XspI | CTAG | 2 cut(s) | 246, 1031 |