Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0009642

Physical Location & Seq

Genomic Coordinates Forward (+)

8200434 .. 8205659

Gene Structure 5226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G008320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGAGTGAAACCAAGGAAAAGGAGGATATAGCAGTTGATGGTTCAGATAGTGCCCGAAAAACCGAGAATAGTGAGCAGGATGATTCTTTTCATTCTGTGGAATCTGGACAAGTCCAGGAAACAATTGACAATGGAGAAACTGTACCCGAAAAGACGGATATTGAGATGACAGCAGCTAATGAAGATAATGTGGTAGAATCTGGAAAAGGCCAGGAAACCCCAAGACCAACTGACAATGGAGAAACTCTACGCGAAAACACGGATATTGAGATGACAGCCGCTGATGACGCTAATGTAGGACCACAGTCCACTTCGGGCCAATCCGGTCAAGAGCCTCCTCCTCCCTTGGTCCCAGAAAAGGGAGATGACGGAGAGTTAGTTAAGCAGGTTGGTGATACCTTGAATGATGATGATCAAGAGTTGGACAAGCCAGGTGATGATCCCCCGTCAGATGTAAAGACTGAGATGCGGGAGTTGCCCCAAAATAGTGATAATGGCTATGAGGAGAATGCTGAACCAAATAGTGGTGCTGCTGGAGATATCATAACTGCAAGCAATAACGAACCTGCTACGCCTCATGCTGGATTTTCTGATATAAAAGCTGAAAATAAGAATGGGAAAGAGTTGGAGAATAAGGTGAATGGAAAAGAAGTTACTACACCCATGAACAATGGAAAGTCAAGCTCGAAGTACATGTTTCTTTCCGATGACAGCCACACGTATGATGGTAATGACTCTGGGACAGAAGAGGAACAATTGGATTTCATGAAGGAGATTGAAAATTTCTTCAAGGAGAGGAGCATGGAATTTAAACCTCCCAAGTTCTATGGAGACTGTGTGAATTGCCTTAAGCTGTATAGAATTGTGACTAGACTGGGAGGCTATGATAAGGTGACCTCATCTAAGCTGTGGAGGCAAGTGGGAGCGTCCTTTAAACCTCCAAGGACATGCACTACAATTTCATGGTCATTCAGAGGTTTCTATGAGAAGGCACTCCTTGATTATGAAAAGCATGAAATGCATGGTGTTGAGCTCAGTATACCTATCCCTTCCCAGCCAAAGCCTATTAATATTGATAATCGGGCTTCCGGATCAGGTAGAACAAGAAGGGATGCTGCAGCACGTGCCATGCAAGGTTGGCACTCACAACGTCTCCTTGGTAATGGTGAAGTCAGTGAACCAATCATAAAGGATAAAAGTGCTAATGCTTTGCAAAAGCAAGAAAAGCAGCTTAAAACCAGTGGTTCACATAAAAGAAAGAAGCCACCCAATGTGGATCCTGTGGTACAAGCTGCACGTACTAAACCAACAAAGTTACAATTGGATGTAGATGTTTCTGATCTCGGACCTCCAGCAGATTGGGTGAAGGTCAATGTGCAGAAGACTAAAGATTGTTTTGAGGTCTATGCTTTAGTACCAGGACTTCTACGTGAGGAGGTGCGTGTTCAGACAGATCCAGCTGGGCGACTGGTTATAAGTGGTGAACCTGAGCATCCTGATAATCCATGGGGTGTCACACCTTTCAAAAAGGCTGTCTCCTTACCATCCAGAATTGATCCTCACCATACATCGGCCGTGGTCACCCTGCATGGACAATTGTTTGTTCGTGTCCCGTTTGAGCAGTCGGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

544

Amino Acids

60.0

Weight (kDa)

4.85

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARID	PF01388	252 - 336	2.1e-19	ARID/BRIGHT DNA binding domain
HSP20	PF00011	460 - 543	6.2e-06	Hsp20/alpha crystallin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009642)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750
malus_domestica	MD02G1107900.v1.1 MD15G1227400.v1.1
prunus_persica	Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1
pyrus_communis	pycom02g08670 pycom15g20240
rosa_chinensis	RchiOBHm_Chr2g0096711
rosa_laevigata	RLG00000016664
rosa_multiflora	Rmu_ssc0000215.1_g000063
rosa_roxburghii	Rroxscaffold_2G00145390
rosa_rugosa	Rorug02G0060000 Rorug02G0060100
rosa_samantha	Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100
rosa_wichuraiana	Rw2G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1475
Acc36I	ACCTGC	2 cut(s)	376, 574
AccB7I	CCANNNNNTGG	1 cut(s)	524
AccI	GTMKAC	1 cut(s)	1039
AccII	CGCG	1 cut(s)	252
AccIII	TCCGGA	1 cut(s)	1088
AciI	CCGC	2 cut(s)	279, 469
AclWI	GGATC	6 cut(s)	434, 1099, 1271, 1284, 1448, 1550
AcoI	YGGCCR	1 cut(s)	1572
AcsI	RAATTY	2 cut(s)	781, 806
AcvI	CACGTG	1 cut(s)	1124
AfaI	GTAC	5 cut(s)	144, 692, 1287, 1300, 1416
AfiI	CCNNNNNNNGG	5 cut(s)	358, 359, 524, 581, 1570
AflII	CTTAAG	1 cut(s)	848
AflIII	ACRYGT	2 cut(s)	693, 717
AgsI	TTSAA	4 cut(s)	403, 779, 790, 1525
AjnI	CCWGG	4 cut(s)	114, 210, 430, 1417
AluBI	AGCT	9 cut(s)	176, 602, 684, 853, 907, 1033, 1231, 1292, 1460
AluI	AGCT	9 cut(s)	176, 602, 684, 853, 907, 1033, 1231, 1292, 1460
Alw21I	GWGCWC	1 cut(s)	1035
Alw26I	GTCTC	3 cut(s)	825, 1157, 1540
AlwI	GGATC	6 cut(s)	434, 1099, 1271, 1284, 1448, 1550
AlwNI	CAGNNNCTG	1 cut(s)	281
Aor13HI	TCCGGA	1 cut(s)	1088
AoxI	GGCC	3 cut(s)	208, 316, 1572
ApeKI	GCWGC	6 cut(s)	173, 530, 1115, 1118, 1228, 1292
ApoI	RAATTY	2 cut(s)	781, 806
ArsI	GACNNNNNNTTYG	2 cut(s)	1518, 1550
AseI	ATTAAT	1 cut(s)	1068
AspS9I	GGNCC	4 cut(s)	299, 316, 349, 1346
AsuHPI	GGTGA	9 cut(s)	404, 446, 649, 904, 1178, 1375, 1493, 1553, 1573
AvaII	GGWCC	3 cut(s)	299, 349, 1346
BaeGI	GKGCMC	1 cut(s)	55
BamHI	GGATCC	1 cut(s)	1276
BanII	GRGCYC	1 cut(s)	1035
BarI	GAAGNNNNNNTAC	2 cut(s)	1407, 1439
BbrPI	CACGTG	1 cut(s)	1124
BbsI	GAAGAC	1 cut(s)	1388
Bbv12I	GWGCWC	1 cut(s)	1035
BbvI	GCAGC	6 cut(s)	185, 517, 1102, 1130, 1240, 1279
BccI	CCATC	3 cut(s)	32, 719, 1552
BceAI	ACGGC	1 cut(s)	1559
BciT130I	CCWGG	4 cut(s)	116, 212, 432, 1419
BclI	TGATCA	1 cut(s)	412
BcoDI	GTCTC	3 cut(s)	825, 1157, 1540
BfaI	CTAG	1 cut(s)	870
BfmI	CTRYAG	1 cut(s)	1116
BfrI	CTTAAG	1 cut(s)	848
BfuAI	ACCTGC	2 cut(s)	376, 574
BisI	GCNGC	7 cut(s)	174, 279, 531, 1116, 1119, 1229, 1293
BlsI	GCNGC	7 cut(s)	175, 280, 532, 1117, 1120, 1230, 1294
Bme1390I	CCNGG	4 cut(s)	116, 212, 432, 1419
Bme18I	GGWCC	3 cut(s)	299, 349, 1346
BmgT120I	GGNCC	4 cut(s)	299, 316, 349, 1346
BmiI	GGNNCC	2 cut(s)	351, 1278
BmrFI	CCNGG	4 cut(s)	116, 212, 432, 1419
BmrI	ACTGGG	1 cut(s)	884
BmsI	GCATC	3 cut(s)	456, 1102, 1501
BmuI	ACTGGG	1 cut(s)	884
BoxI	GACNNNNGTC	1 cut(s)	304
BpiI	GAAGAC	1 cut(s)	1388
BpmI	CTGGAG	2 cut(s)	555, 1335
Bpu10I	CCTNAGC	1 cut(s)	1488
BsaAI	YACGTR	4 cut(s)	720, 1124, 1298, 1430
BsaBI	GATNNNNATC	1 cut(s)	411
BsaJI	CCNNGG	6 cut(s)	12, 345, 941, 1156, 1505, 1575
BsaWI	WCCGGW	2 cut(s)	323, 1088
BsaXI	ACNNNNNCTCC	8 cut(s)	126, 156, 363, 393, 822, 852, 1137, 1167
Bsc4I	CCNNNNNNNGG	5 cut(s)	358, 359, 524, 581, 1570
Bse1I	ACTGG	3 cut(s)	879, 1239, 1473
Bse8I	GATNNNNATC	1 cut(s)	411
BseAI	TCCGGA	1 cut(s)	1088
BseBI	CCWGG	4 cut(s)	116, 212, 432, 1419
BseDI	CCNNGG	6 cut(s)	12, 345, 941, 1156, 1505, 1575
BseGI	GGATG	5 cut(s)	85, 1117, 1330, 1492, 1544
BseJI	GATNNNNATC	1 cut(s)	411
BseLI	CCNNNNNNNGG	5 cut(s)	358, 359, 524, 581, 1570
BseMII	CTCAG	3 cut(s)	453, 1048, 1479
BseNI	ACTGG	3 cut(s)	879, 1239, 1473
BseRI	GAGGAG	5 cut(s)	327, 330, 518, 811, 1448
BseSI	GKGCMC	1 cut(s)	55
BseX3I	CGGCCG	1 cut(s)	1572
BseXI	GCAGC	6 cut(s)	185, 517, 1102, 1130, 1240, 1279
BseYI	CCCAGC	2 cut(s)	1053, 1460
BsgI	GTGCAG	2 cut(s)	1278, 1397
Bsh1236I	CGCG	1 cut(s)	252
Bsh1285I	CGRYCG	1 cut(s)	1575
BshFI	GGCC	3 cut(s)	210, 318, 1574
BsiEI	CGRYCG	1 cut(s)	1575
BsiHKAI	GWGCWC	1 cut(s)	1035
BsiSI	CCGG	2 cut(s)	324, 1089
BslFI	GGGAC	3 cut(s)	335, 754, 1595
BslI	CCNNNNNNNGG	5 cut(s)	358, 359, 524, 581, 1570
BsmAI	GTCTC	3 cut(s)	825, 1157, 1540
BsmBI	CGTCTC	1 cut(s)	1157
BsmFI	GGGAC	3 cut(s)	335, 754, 1595
BsmI	GAATGC	1 cut(s)	514
BsnI	GGCC	3 cut(s)	210, 318, 1574
Bsp1286I	GDGCHC	2 cut(s)	55, 1035
Bsp13I	TCCGGA	1 cut(s)	1088
Bsp143I	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
Bsp19I	CCATGG	1 cut(s)	1505
BspACI	CCGC	2 cut(s)	279, 469
BspANI	GGCC	3 cut(s)	210, 318, 1574
BspCNI	CTCAG	3 cut(s)	454, 1047, 1480
BspEI	TCCGGA	1 cut(s)	1088
BspFNI	CGCG	1 cut(s)	252
BspHI	TCATGA	1 cut(s)	765
BspLI	GGNNCC	2 cut(s)	351, 1278
BspMAI	CTGCAG	1 cut(s)	1120
BspMI	ACCTGC	2 cut(s)	376, 574
BspPI	GGATC	6 cut(s)	434, 1099, 1271, 1284, 1448, 1550
BspTI	CTTAAG	1 cut(s)	848
BsrI	ACTGG	3 cut(s)	879, 1239, 1473
BssECI	CCNNGG	6 cut(s)	12, 345, 941, 1156, 1505, 1575
BssMI	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
BssNAI	GTATAC	1 cut(s)	1040
BssT1I	CCWWGG	5 cut(s)	12, 345, 941, 1156, 1505
Bst1107I	GTATAC	1 cut(s)	1040
Bst2UI	CCWGG	4 cut(s)	116, 212, 432, 1419
Bst4CI	ACNGT	4 cut(s)	142, 306, 836, 1632
Bst6I	CTCTTC	1 cut(s)	741
BstAFI	CTTAAG	1 cut(s)	848
BstAPI	GCANNNNNTGC	2 cut(s)	1018, 1124
BstBAI	YACGTR	4 cut(s)	720, 1124, 1298, 1430
BstC8I	GCNNGC	1 cut(s)	553
BstDEI	CTNAG	4 cut(s)	462, 903, 1034, 1488
BstDSI	CCRYGG	2 cut(s)	1505, 1575
BstEII	GGTNACC	2 cut(s)	892, 1579
BstF5I	GGATG	5 cut(s)	85, 1117, 1330, 1492, 1544
BstFNI	CGCG	1 cut(s)	252
BstKTI	GATC	7 cut(s)	415, 442, 1094, 1279, 1342, 1456, 1558
BstMAI	GTCTC	3 cut(s)	825, 1157, 1540
BstMBI	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
BstMCI	CGRYCG	1 cut(s)	1575
BstMWI	GCNNNNNNNGC	7 cut(s)	287, 475, 913, 1018, 1124, 1138, 1225
BstNI	CCWGG	4 cut(s)	116, 212, 432, 1419
BstNSI	RCATGY	2 cut(s)	697, 951
BstPAI	GACNNNNGTC	1 cut(s)	304
BstPI	GGTNACC	2 cut(s)	892, 1579
BstSCI	CCNGG	4 cut(s)	114, 210, 430, 1417
BstSFI	CTRYAG	1 cut(s)	1116
BstSLI	GKGCMC	1 cut(s)	55
BstUI	CGCG	1 cut(s)	252
BstV1I	GCAGC	6 cut(s)	185, 517, 1102, 1130, 1240, 1279
BstV2I	GAAGAC	1 cut(s)	1388
BstX2I	RGATCY	2 cut(s)	1276, 1453
BstXI	CCANNNNNNTGG	1 cut(s)	1359
BstYI	RGATCY	2 cut(s)	1276, 1453
BstZ17I	GTATAC	1 cut(s)	1040
BstZI	CGGCCG	1 cut(s)	1572
BsuRI	GGCC	3 cut(s)	210, 318, 1574
BtgI	CCRYGG	2 cut(s)	1505, 1575
BtsCI	GGATG	5 cut(s)	85, 1117, 1330, 1492, 1544
BtsIMutI	CAGTG	2 cut(s)	1180, 1246
BveI	ACCTGC	2 cut(s)	376, 574
Cac8I	GCNNGC	1 cut(s)	553
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	765
Cfr13I	GGNCC	4 cut(s)	299, 316, 349, 1346
CseI	GACGC	2 cut(s)	296, 915
Csp6I	GTAC	5 cut(s)	143, 691, 1286, 1299, 1415
CviQI	GTAC	5 cut(s)	143, 691, 1286, 1299, 1415
DdeI	CTNAG	4 cut(s)	462, 903, 1034, 1488
DpnI	GATC	7 cut(s)	414, 441, 1093, 1278, 1341, 1455, 1557
DpnII	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
DraI	TTTAAA	2 cut(s)	811, 934
EaeI	YGGCCR	1 cut(s)	1572
EagI	CGGCCG	1 cut(s)	1572
Eam1104I	CTCTTC	1 cut(s)	741
EarI	CTCTTC	1 cut(s)	741
Ecl136II	GAGCTC	1 cut(s)	1033
EclXI	CGGCCG	1 cut(s)	1572
Eco130I	CCWWGG	5 cut(s)	12, 345, 941, 1156, 1505
Eco24I	GRGCYC	1 cut(s)	1035
Eco32I	GATATC	1 cut(s)	541
Eco47I	GGWCC	3 cut(s)	299, 349, 1346
Eco52I	CGGCCG	1 cut(s)	1572
Eco53kI	GAGCTC	1 cut(s)	1033
Eco72I	CACGTG	1 cut(s)	1124
Eco91I	GGTNACC	2 cut(s)	892, 1579
EcoICRI	GAGCTC	1 cut(s)	1033
EcoO65I	GGTNACC	2 cut(s)	892, 1579
EcoRII	CCWGG	4 cut(s)	114, 210, 430, 1417
EcoRV	GATATC	1 cut(s)	541
EcoT14I	CCWWGG	5 cut(s)	12, 345, 941, 1156, 1505
EcoT22I	ATGCAT	1 cut(s)	1023
EcoT38I	GRGCYC	1 cut(s)	1035
ErhI	CCWWGG	5 cut(s)	12, 345, 941, 1156, 1505
Esp3I	CGTCTC	1 cut(s)	1157
FaqI	GGGAC	3 cut(s)	335, 754, 1595
FauI	CCCGC	1 cut(s)	462
FbaI	TGATCA	1 cut(s)	412
FblI	GTMKAC	1 cut(s)	1039
Fnu4HI	GCNGC	7 cut(s)	174, 279, 531, 1116, 1119, 1229, 1293
FokI	GGATG	5 cut(s)	92, 1124, 1337, 1479, 1531
FriOI	GRGCYC	1 cut(s)	1035
Fsp4HI	GCNGC	7 cut(s)	174, 279, 531, 1116, 1119, 1229, 1293
FspBI	CTAG	1 cut(s)	870
GluI	GCNGC	7 cut(s)	174, 279, 531, 1116, 1119, 1229, 1293
GsaI	CCCAGC	2 cut(s)	1057, 1464
GsuI	CTGGAG	2 cut(s)	555, 1335
HaeIII	GGCC	3 cut(s)	210, 318, 1574
HapII	CCGG	2 cut(s)	324, 1089
HgaI	GACGC	2 cut(s)	296, 915
HinfI	GANTC	4 cut(s)	83, 101, 197, 734
HpaII	CCGG	2 cut(s)	324, 1089
HphI	GGTGA	9 cut(s)	404, 446, 649, 904, 1178, 1375, 1493, 1553, 1573
Hpy166II	GTNNAC	5 cut(s)	309, 1040, 1178, 1247, 1484
Hpy188I	TCNGA	9 cut(s)	46, 451, 592, 706, 974, 1339, 1346, 1449, 1627
Hpy188III	TCNNGA	8 cut(s)	105, 201, 329, 416, 766, 1089, 1496, 1548
Hpy8I	GTNNAC	5 cut(s)	309, 1040, 1178, 1247, 1484
HpyAV	CCTTC	5 cut(s)	763, 982, 1059, 1101, 1360
HpyCH4III	ACNGT	4 cut(s)	142, 306, 836, 1632
HpyCH4IV	ACGT	5 cut(s)	719, 1123, 1150, 1297, 1429
HpyCH4V	TGCA	9 cut(s)	551, 951, 1021, 1118, 1132, 1213, 1295, 1378, 1588
HpyF10VI	GCNNNNNNNGC	7 cut(s)	287, 475, 913, 1018, 1124, 1138, 1225
HpyF3I	CTNAG	4 cut(s)	462, 903, 1034, 1488
HpySE526I	ACGT	5 cut(s)	719, 1123, 1150, 1297, 1429
Kpn2I	TCCGGA	1 cut(s)	1088
Ksp22I	TGATCA	1 cut(s)	412
Kzo9I	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
LmnI	GCTCC	2 cut(s)	798, 923
Lsp1109I	GCAGC	6 cut(s)	185, 517, 1102, 1130, 1240, 1279
LweI	GCATC	3 cut(s)	456, 1102, 1501
MaeI	CTAG	1 cut(s)	870
MaeII	ACGT	5 cut(s)	719, 1123, 1150, 1297, 1429
MaeIII	GTNAC	6 cut(s)	652, 865, 892, 1314, 1513, 1579
MalI	GATC	7 cut(s)	414, 441, 1093, 1278, 1341, 1455, 1557
MboI	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
MboII	GAAGA	4 cut(s)	194, 758, 778, 1393
MfeI	CAATTG	4 cut(s)	123, 755, 1319, 1595
MflI	RGATCY	2 cut(s)	1276, 1453
MhlI	GDGCHC	2 cut(s)	55, 1035
MlyI	GAGTC	1 cut(s)	728
MmeI	TCCRAC	3 cut(s)	402, 606, 1605
Mph1103I	ATGCAT	1 cut(s)	1023
MroI	TCCGGA	1 cut(s)	1088
MseI	TTAA	6 cut(s)	381, 810, 849, 933, 1068, 1233
MslI	CAYNNNNRTG	1 cut(s)	720
MspA1I	CMGCKG	2 cut(s)	281, 1460
MspCI	CTTAAG	1 cut(s)	848
MspI	CCGG	2 cut(s)	324, 1089
MspR9I	CCNGG	4 cut(s)	116, 212, 432, 1419
MunI	CAATTG	4 cut(s)	123, 755, 1319, 1595
Mva1269I	GAATGC	1 cut(s)	514
MvaI	CCWGG	4 cut(s)	116, 212, 432, 1419
MvnI	CGCG	1 cut(s)	252
MwoI	GCNNNNNNNGC	7 cut(s)	287, 475, 913, 1018, 1124, 1138, 1225
NcoI	CCATGG	1 cut(s)	1505
NdeII	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
NlaIV	GGNNCC	2 cut(s)	351, 1278
NmuCI	GTSAC	4 cut(s)	865, 892, 1513, 1579
NsiI	ATGCAT	1 cut(s)	1023
NspI	RCATGY	2 cut(s)	697, 951
PagI	TCATGA	1 cut(s)	765
PciI	ACATGT	1 cut(s)	693
PctI	GAATGC	1 cut(s)	514
PfeI	GAWTC	3 cut(s)	83, 101, 197
PflMI	CCANNNNNTGG	1 cut(s)	524
PfoI	TCCNGGA	1 cut(s)	114
PkrI	GCNGC	7 cut(s)	175, 280, 532, 1117, 1120, 1230, 1294
PleI	GAGTC	1 cut(s)	728
PmaCI	CACGTG	1 cut(s)	1124
PmlI	CACGTG	1 cut(s)	1124
PpsI	GAGTC	1 cut(s)	728
Ppu21I	YACGTR	4 cut(s)	720, 1124, 1298, 1430
PscI	ACATGT	1 cut(s)	693
PshAI	GACNNNNGTC	1 cut(s)	304
PshBI	ATTAAT	1 cut(s)	1068
PsiI	TTATAA	1 cut(s)	1475
Psp124BI	GAGCTC	1 cut(s)	1035
Psp6I	CCWGG	4 cut(s)	114, 210, 430, 1417
PspCI	CACGTG	1 cut(s)	1124
PspEI	GGTNACC	2 cut(s)	892, 1579
PspFI	CCCAGC	2 cut(s)	1053, 1460
PspGI	CCWGG	4 cut(s)	114, 210, 430, 1417
PspN4I	GGNNCC	2 cut(s)	351, 1278
PspPI	GGNCC	4 cut(s)	299, 316, 349, 1346
PstI	CTGCAG	1 cut(s)	1120
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	2 cut(s)	1276, 1453
PvuII	CAGCTG	1 cut(s)	1460
RsaI	GTAC	5 cut(s)	144, 692, 1287, 1300, 1416
RsaNI	GTAC	5 cut(s)	143, 691, 1286, 1299, 1415
RseI	CAYNNNNRTG	1 cut(s)	720
SacI	GAGCTC	1 cut(s)	1035
SaqAI	TTAA	6 cut(s)	381, 810, 849, 933, 1068, 1233
SatI	GCNGC	7 cut(s)	174, 279, 531, 1116, 1119, 1229, 1293
Sau3AI	GATC	7 cut(s)	412, 439, 1091, 1276, 1339, 1453, 1555
Sau96I	GGNCC	4 cut(s)	299, 316, 349, 1346
SchI	GAGTC	1 cut(s)	728
ScrFI	CCNGG	4 cut(s)	116, 212, 432, 1419
SduI	GDGCHC	2 cut(s)	55, 1035
SfaNI	GCATC	3 cut(s)	456, 1102, 1501
SfcI	CTRYAG	1 cut(s)	1116
SinI	GGWCC	3 cut(s)	299, 349, 1346
SmiMI	CAYNNNNRTG	1 cut(s)	720
SmlI	CTYRAG	1 cut(s)	848
SmoI	CTYRAG	1 cut(s)	848
SsiI	CCGC	2 cut(s)	279, 469
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	1 cut(s)	870
SstI	GAGCTC	1 cut(s)	1035
StyD4I	CCNGG	4 cut(s)	114, 210, 430, 1417
StyI	CCWWGG	5 cut(s)	12, 345, 941, 1156, 1505
TaaI	ACNGT	4 cut(s)	142, 306, 836, 1632
TaiI	ACGT	5 cut(s)	722, 1126, 1153, 1300, 1432
TaqI	TCGA	1 cut(s)	686
TatI	WGTACW	1 cut(s)	690
TauI	GCSGC	1 cut(s)	281
TfiI	GAWTC	3 cut(s)	83, 101, 197
Tru1I	TTAA	6 cut(s)	381, 810, 849, 933, 1068, 1233
Tru9I	TTAA	6 cut(s)	381, 810, 849, 933, 1068, 1233
TscAI	CASTG	2 cut(s)	1180, 1246
TseFI	GTSAC	4 cut(s)	865, 892, 1513, 1579
TseI	GCWGC	6 cut(s)	173, 530, 1115, 1118, 1228, 1292
Tsp45I	GTSAC	4 cut(s)	865, 892, 1513, 1579
TspDTI	ATGAA	8 cut(s)	80, 195, 680, 754, 782, 951, 1020, 1029
TspGWI	ACGGA	3 cut(s)	170, 275, 384
TspRI	CASTG	2 cut(s)	1180, 1246
Van91I	CCANNNNNTGG	1 cut(s)	524
Vha464I	CTTAAG	1 cut(s)	848
VpaK11BI	GGWCC	3 cut(s)	299, 349, 1346
VspI	ATTAAT	1 cut(s)	1068
XapI	RAATTY	2 cut(s)	781, 806
XceI	RCATGY	2 cut(s)	697, 951
XcmI	CCANNNNNNNNNTGG	1 cut(s)	722
XmiI	GTMKAC	1 cut(s)	1039
XspI	CTAG	1 cut(s)	870
Zsp2I	ATGCAT	1 cut(s)	1023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.