Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009642

Physical Location & Seq

Genomic Coordinates Forward (+)

9247621 .. 9253952

Gene Structure 6332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG109700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGTACGTATTCGATCATCAGGCCACGATTTCAAGCCTTCGTCTTCTCCGATTCCAAACCAGGAAATGAGTGAAACCAAGGAAAAGGAGGATATAGCAGTTGATGGTTCAGATAGTGCCCGGAAAACCGAGAATAGTGAGCAGGAAGATTCTTTTCATTCTGTGGAATCTGGACAAGTCCAGGAAACAATTGACAATGGAGAAACTGTGACGGATATTGAGATGACAGCAGCTGATGAAGATAATGTAGTAGAATCTGGAAAAGGCCAGGAAACCCCAAAACCAACTGACAATGGAGAAACTCTACGCGAAAACACGGATATTGAGATGACAGCAGCTGATGAAGCTAATGTAGGACCACAGTCCACTTCGGGCCAATCCGGTCAAGAGCCTCCTCCTCCCTTGGTCCCAGAAAAGGGAGATGATGGAGAGTTAGTTAAGCAGGGTGGTGATACCTTGAATGATGATGATCAAGAGTTGGACAAGCCAGGTGATGAGCCCCCGTCAGATGTAAAGACTGAGATGCGGGAGTTGCCCCAAAATAGTGATAATGGCTATGAGGAGAATGCTGAACCAAATAGTGGTGCTGCTGGAGATATCATAACTGCAAGCAATAATGAACCTGCTACGCCTCATGCTGGATTTTCTGATATAAAAGCTGAAAATAAGAATGGCAAAGAGTTGGAGAATAAGGTGAATGGAAAAGAAGTTACTACACCCATGAACAATGGAAAGTCAAGCTCGAAGTACATGTTTCTTTCCGATGACAGCCACACGTATGATGGTAATGACTCTGGGACAGAAGAGGAACAATTGGATTTCATGAAGGAGATTGAAAATTTCTTCAAGGAGAGGAGCATGGAATTTAAACCTCCTAAGTTCTATGGAGACTGTGTGAATTGCCTTAAGCTGTATAGAATTGTGACTAGACTGGGAGGCTATGATAAGGTGACCTCATCTAAGCTGTGGAGGCAAGTGGGAGCGTCCTTTAAACCTCCAAGGACATGCACTACAATTTCATGGTCATTCAGAGGTTTCTACGAGAAGGCACTCCTTGATTATGAAAAGCATGAAATGCATGGTGGTGAGCTCAGTATACCTATCCCTTCCCAGCCAAAGCCTATTAATATTGATAATCGGGCTTCCGGATCAGGTCGAACAAGAAGGGATGCTGCAGCACGTGCCATGCAAGGTTGGCACTCACAACGTCTCCTTGGTAATGGTGAAGTCAGTGAACCAATCATAAAGGATAAAAATGCTAATGCTTTGCAAAAGCAAGAAAAGCAGCTTAAAACCAGTGGTTCACATAAAAGAAAGAAGCCACCCAATGTGGATCCTGTGGTACAAGCTGCACGTACTAAACCAACAAAGTTACAATTGGATGTAGATGTTTCTGATCTCGGACCTCCAGCAGATTGGGTGAAGGTCAATGTGCAGAAGACTAAAGATTGTTTTGAGGTCTATGCTTTAGTACCAGGACTTCTACGTGAGGAGGTGCGTGTTCAGACAGATCCAGCTGGGCGACTGGTTATAAGTGGTGAACCTGAGCATCCTGATAATCCATGGGGTGTCACACCTTTCAAAAAGGCTGTCACCTTACCATCCAGAATTGATCCTCACCATACATCGGCCGTGGTCACCCTGCATGGACAATTGTTTGTTCGTGTCCCGTTTGAGCAGTCGGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

563

Amino Acids

62.07

Weight (kDa)

4.89

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARID	PF01388	271 - 355	2.2e-19	ARID/BRIGHT DNA binding domain
HSP20	PF00011	479 - 562	4.3e-06	Hsp20/alpha crystallin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009642)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750
malus_domestica	MD02G1107900.v1.1 MD15G1227400.v1.1
prunus_persica	Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1
pyrus_communis	pycom02g08670 pycom15g20240
rosa_chinensis	RchiOBHm_Chr2g0096711
rosa_laevigata	RLG00000016664
rosa_multiflora	Rmu_ssc0000215.1_g000063
rosa_roxburghii	Rroxscaffold_2G00145390
rosa_rugosa	Rorug02G0060000 Rorug02G0060100
rosa_samantha	Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100
rosa_wichuraiana	Rw2G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1532
Acc36I	ACCTGC	1 cut(s)	631
AccB7I	CCANNNNNTGG	1 cut(s)	581
AccI	GTMKAC	1 cut(s)	1096
AccII	CGCG	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	1145
AciI	CCGC	1 cut(s)	526
AclWI	GGATC	5 cut(s)	1156, 1328, 1341, 1505, 1607
AcoI	YGGCCR	1 cut(s)	1629
AcsI	RAATTY	2 cut(s)	838, 863
AcvI	CACGTG	1 cut(s)	1181
AfaI	GTAC	5 cut(s)	6, 749, 1344, 1357, 1473
AfiI	CCNNNNNNNGG	5 cut(s)	415, 416, 581, 638, 1627
AflII	CTTAAG	1 cut(s)	905
AflIII	ACRYGT	2 cut(s)	750, 774
AgsI	TTSAA	5 cut(s)	34, 460, 836, 847, 1582
AjnI	CCWGG	5 cut(s)	60, 180, 267, 487, 1474
Alw21I	GWGCWC	1 cut(s)	1092
Alw26I	GTCTC	2 cut(s)	882, 1214
AlwI	GGATC	5 cut(s)	1156, 1328, 1341, 1505, 1607
AlwNI	CAGNNNCTG	2 cut(s)	233, 338
Aor13HI	TCCGGA	1 cut(s)	1145
AoxI	GGCC	4 cut(s)	22, 265, 373, 1629
ApeKI	GCWGC	7 cut(s)	230, 335, 587, 1172, 1175, 1285, 1349
ApoI	RAATTY	2 cut(s)	838, 863
ArsI	GACNNNNNNTTYG	2 cut(s)	1575, 1607
AseI	ATTAAT	1 cut(s)	1125
AspS9I	GGNCC	4 cut(s)	356, 373, 406, 1403
AsuC2I	CCSGG	1 cut(s)	121
AvaII	GGWCC	3 cut(s)	356, 406, 1403
BaeGI	GKGCMC	1 cut(s)	121
BamHI	GGATCC	1 cut(s)	1333
BanII	GRGCYC	2 cut(s)	501, 1092
BarI	GAAGNNNNNNTAC	2 cut(s)	1464, 1496
BbrPI	CACGTG	1 cut(s)	1181
BbsI	GAAGAC	2 cut(s)	36, 1445
Bbv12I	GWGCWC	1 cut(s)	1092
BbvI	GCAGC	7 cut(s)	242, 347, 574, 1159, 1187, 1297, 1336
BccI	CCATC	4 cut(s)	98, 419, 776, 1609
BceAI	ACGGC	1 cut(s)	1616
BciT130I	CCWGG	5 cut(s)	62, 182, 269, 489, 1476
BclI	TGATCA	1 cut(s)	469
BcnI	CCSGG	1 cut(s)	121
BcoDI	GTCTC	2 cut(s)	882, 1214
BfaI	CTAG	1 cut(s)	927
BfmI	CTRYAG	1 cut(s)	1173
BfrI	CTTAAG	1 cut(s)	905
BfuAI	ACCTGC	1 cut(s)	631
BisI	GCNGC	7 cut(s)	231, 336, 588, 1173, 1176, 1286, 1350
BlsI	GCNGC	7 cut(s)	232, 337, 589, 1174, 1177, 1287, 1351
Bme1390I	CCNGG	6 cut(s)	62, 121, 182, 269, 489, 1476
Bme18I	GGWCC	3 cut(s)	356, 406, 1403
BmgT120I	GGNCC	4 cut(s)	356, 373, 406, 1403
BmiI	GGNNCC	2 cut(s)	408, 1335
BmrFI	CCNGG	6 cut(s)	62, 121, 182, 269, 489, 1476
BmrI	ACTGGG	1 cut(s)	941
BmsI	GCATC	3 cut(s)	513, 1159, 1558
BmuI	ACTGGG	1 cut(s)	941
BoxI	GACNNNNGTC	1 cut(s)	361
BpiI	GAAGAC	2 cut(s)	36, 1445
BpmI	CTGGAG	2 cut(s)	612, 1392
Bpu10I	CCTNAGC	1 cut(s)	1545
BpuMI	CCSGG	1 cut(s)	121
BsaAI	YACGTR	5 cut(s)	8, 777, 1181, 1355, 1487
BsaBI	GATNNNNATC	1 cut(s)	468
BsaJI	CCNNGG	6 cut(s)	78, 402, 998, 1213, 1562, 1632
BsaWI	WCCGGW	2 cut(s)	380, 1145
BsaXI	ACNNNNNCTCC	8 cut(s)	192, 222, 420, 450, 879, 909, 1194, 1224
Bsc4I	CCNNNNNNNGG	5 cut(s)	415, 416, 581, 638, 1627
Bse1I	ACTGG	3 cut(s)	936, 1296, 1530
Bse8I	GATNNNNATC	1 cut(s)	468
BseAI	TCCGGA	1 cut(s)	1145
BseBI	CCWGG	5 cut(s)	62, 182, 269, 489, 1476
BseDI	CCNNGG	6 cut(s)	78, 402, 998, 1213, 1562, 1632
BseGI	GGATG	4 cut(s)	1174, 1387, 1549, 1601
BseJI	GATNNNNATC	1 cut(s)	468
BseLI	CCNNNNNNNGG	5 cut(s)	415, 416, 581, 638, 1627
BseMII	CTCAG	3 cut(s)	510, 1105, 1536
BseNI	ACTGG	3 cut(s)	936, 1296, 1530
BseRI	GAGGAG	5 cut(s)	384, 387, 575, 868, 1505
BseSI	GKGCMC	1 cut(s)	121
BseX3I	CGGCCG	1 cut(s)	1629
BseXI	GCAGC	7 cut(s)	242, 347, 574, 1159, 1187, 1297, 1336
BseYI	CCCAGC	2 cut(s)	1110, 1517
BsgI	GTGCAG	2 cut(s)	1335, 1454
Bsh1236I	CGCG	1 cut(s)	309
Bsh1285I	CGRYCG	1 cut(s)	1632
BshFI	GGCC	4 cut(s)	24, 267, 375, 1631
BsiEI	CGRYCG	1 cut(s)	1632
BsiHKAI	GWGCWC	1 cut(s)	1092
BsiSI	CCGG	3 cut(s)	121, 381, 1146
BslFI	GGGAC	3 cut(s)	392, 811, 1652
BslI	CCNNNNNNNGG	5 cut(s)	415, 416, 581, 638, 1627
BsmAI	GTCTC	2 cut(s)	882, 1214
BsmBI	CGTCTC	1 cut(s)	1214
BsmFI	GGGAC	3 cut(s)	392, 811, 1652
BsmI	GAATGC	1 cut(s)	571
BsnI	GGCC	4 cut(s)	24, 267, 375, 1631
Bsp1286I	GDGCHC	3 cut(s)	121, 501, 1092
Bsp13I	TCCGGA	1 cut(s)	1145
Bsp143I	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
Bsp19I	CCATGG	1 cut(s)	1562
BspACI	CCGC	1 cut(s)	526
BspANI	GGCC	4 cut(s)	24, 267, 375, 1631
BspCNI	CTCAG	3 cut(s)	511, 1104, 1537
BspEI	TCCGGA	1 cut(s)	1145
BspFNI	CGCG	1 cut(s)	309
BspHI	TCATGA	1 cut(s)	822
BspLI	GGNNCC	2 cut(s)	408, 1335
BspMAI	CTGCAG	1 cut(s)	1177
BspMI	ACCTGC	1 cut(s)	631
BspPI	GGATC	5 cut(s)	1156, 1328, 1341, 1505, 1607
BspTI	CTTAAG	1 cut(s)	905
BsrI	ACTGG	3 cut(s)	936, 1296, 1530
BssECI	CCNNGG	6 cut(s)	78, 402, 998, 1213, 1562, 1632
BssMI	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
BssNAI	GTATAC	1 cut(s)	1097
BssT1I	CCWWGG	5 cut(s)	78, 402, 998, 1213, 1562
Bst1107I	GTATAC	1 cut(s)	1097
Bst2UI	CCWGG	5 cut(s)	62, 182, 269, 489, 1476
Bst4CI	ACNGT	4 cut(s)	208, 363, 893, 1689
Bst6I	CTCTTC	1 cut(s)	798
BstAFI	CTTAAG	1 cut(s)	905
BstAPI	GCANNNNNTGC	2 cut(s)	1075, 1181
BstBAI	YACGTR	5 cut(s)	8, 777, 1181, 1355, 1487
BstC8I	GCNNGC	1 cut(s)	610
BstDEI	CTNAG	5 cut(s)	519, 876, 960, 1091, 1545
BstDSI	CCRYGG	2 cut(s)	1562, 1632
BstEII	GGTNACC	2 cut(s)	949, 1636
BstF5I	GGATG	4 cut(s)	1174, 1387, 1549, 1601
BstFNI	CGCG	1 cut(s)	309
BstKTI	GATC	7 cut(s)	17, 472, 1151, 1336, 1399, 1513, 1615
BstMAI	GTCTC	2 cut(s)	882, 1214
BstMBI	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
BstMCI	CGRYCG	1 cut(s)	1632
BstMWI	GCNNNNNNNGC	7 cut(s)	344, 532, 970, 1075, 1181, 1195, 1282
BstNI	CCWGG	5 cut(s)	62, 182, 269, 489, 1476
BstNSI	RCATGY	2 cut(s)	754, 1008
BstPAI	GACNNNNGTC	1 cut(s)	361
BstPI	GGTNACC	2 cut(s)	949, 1636
BstSCI	CCNGG	6 cut(s)	60, 119, 180, 267, 487, 1474
BstSFI	CTRYAG	1 cut(s)	1173
BstSLI	GKGCMC	1 cut(s)	121
BstSNI	TACGTA	1 cut(s)	8
BstUI	CGCG	1 cut(s)	309
BstV1I	GCAGC	7 cut(s)	242, 347, 574, 1159, 1187, 1297, 1336
BstV2I	GAAGAC	2 cut(s)	36, 1445
BstX2I	RGATCY	2 cut(s)	1333, 1510
BstXI	CCANNNNNNTGG	1 cut(s)	1416
BstYI	RGATCY	2 cut(s)	1333, 1510
BstZ17I	GTATAC	1 cut(s)	1097
BstZI	CGGCCG	1 cut(s)	1629
BsuRI	GGCC	4 cut(s)	24, 267, 375, 1631
BtgI	CCRYGG	2 cut(s)	1562, 1632
BtsCI	GGATG	4 cut(s)	1174, 1387, 1549, 1601
BtsIMutI	CAGTG	2 cut(s)	1237, 1303
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	1 cut(s)	610
CaiI	CAGNNNCTG	2 cut(s)	233, 338
CciI	TCATGA	1 cut(s)	822
Cfr13I	GGNCC	4 cut(s)	356, 373, 406, 1403
CseI	GACGC	1 cut(s)	972
Csp6I	GTAC	5 cut(s)	5, 748, 1343, 1356, 1472
CviQI	GTAC	5 cut(s)	5, 748, 1343, 1356, 1472
DdeI	CTNAG	5 cut(s)	519, 876, 960, 1091, 1545
DpnI	GATC	7 cut(s)	16, 471, 1150, 1335, 1398, 1512, 1614
DpnII	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
DraI	TTTAAA	2 cut(s)	868, 991
EaeI	YGGCCR	1 cut(s)	1629
EagI	CGGCCG	1 cut(s)	1629
Eam1104I	CTCTTC	1 cut(s)	798
EarI	CTCTTC	1 cut(s)	798
Ecl136II	GAGCTC	1 cut(s)	1090
EclXI	CGGCCG	1 cut(s)	1629
Eco105I	TACGTA	1 cut(s)	8
Eco130I	CCWWGG	5 cut(s)	78, 402, 998, 1213, 1562
Eco24I	GRGCYC	2 cut(s)	501, 1092
Eco32I	GATATC	1 cut(s)	598
Eco47I	GGWCC	3 cut(s)	356, 406, 1403
Eco52I	CGGCCG	1 cut(s)	1629
Eco53kI	GAGCTC	1 cut(s)	1090
Eco72I	CACGTG	1 cut(s)	1181
Eco91I	GGTNACC	2 cut(s)	949, 1636
EcoICRI	GAGCTC	1 cut(s)	1090
EcoO65I	GGTNACC	2 cut(s)	949, 1636
EcoRII	CCWGG	5 cut(s)	60, 180, 267, 487, 1474
EcoRV	GATATC	1 cut(s)	598
EcoT14I	CCWWGG	5 cut(s)	78, 402, 998, 1213, 1562
EcoT22I	ATGCAT	1 cut(s)	1080
EcoT38I	GRGCYC	2 cut(s)	501, 1092
ErhI	CCWWGG	5 cut(s)	78, 402, 998, 1213, 1562
Esp3I	CGTCTC	1 cut(s)	1214
FaqI	GGGAC	3 cut(s)	392, 811, 1652
FauI	CCCGC	1 cut(s)	519
FbaI	TGATCA	1 cut(s)	469
FblI	GTMKAC	1 cut(s)	1096
Fnu4HI	GCNGC	7 cut(s)	231, 336, 588, 1173, 1176, 1286, 1350
FokI	GGATG	4 cut(s)	1181, 1394, 1536, 1588
FriOI	GRGCYC	2 cut(s)	501, 1092
Fsp4HI	GCNGC	7 cut(s)	231, 336, 588, 1173, 1176, 1286, 1350
FspBI	CTAG	1 cut(s)	927
GluI	GCNGC	7 cut(s)	231, 336, 588, 1173, 1176, 1286, 1350
GsaI	CCCAGC	2 cut(s)	1114, 1521
GsuI	CTGGAG	2 cut(s)	612, 1392
HaeIII	GGCC	4 cut(s)	24, 267, 375, 1631
HapII	CCGG	3 cut(s)	121, 381, 1146
HgaI	GACGC	1 cut(s)	972
HinfI	GANTC	5 cut(s)	52, 149, 167, 254, 791
HpaII	CCGG	3 cut(s)	121, 381, 1146
Hpy166II	GTNNAC	5 cut(s)	366, 1097, 1235, 1304, 1541
Hpy188III	TCNNGA	8 cut(s)	171, 258, 386, 473, 823, 1146, 1553, 1605
Hpy8I	GTNNAC	5 cut(s)	366, 1097, 1235, 1304, 1541
HpyAV	CCTTC	6 cut(s)	48, 820, 1039, 1116, 1158, 1417
HpyCH4III	ACNGT	4 cut(s)	208, 363, 893, 1689
HpyCH4IV	ACGT	6 cut(s)	7, 776, 1180, 1207, 1354, 1486
HpyCH4V	TGCA	9 cut(s)	608, 1008, 1078, 1175, 1189, 1270, 1352, 1435, 1645
HpyF10VI	GCNNNNNNNGC	7 cut(s)	344, 532, 970, 1075, 1181, 1195, 1282
HpyF3I	CTNAG	5 cut(s)	519, 876, 960, 1091, 1545
HpySE526I	ACGT	6 cut(s)	7, 776, 1180, 1207, 1354, 1486
Kpn2I	TCCGGA	1 cut(s)	1145
Ksp22I	TGATCA	1 cut(s)	469
Kzo9I	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
LmnI	GCTCC	2 cut(s)	855, 980
Lsp1109I	GCAGC	7 cut(s)	242, 347, 574, 1159, 1187, 1297, 1336
LweI	GCATC	3 cut(s)	513, 1159, 1558
MaeI	CTAG	1 cut(s)	927
MaeII	ACGT	6 cut(s)	7, 776, 1180, 1207, 1354, 1486
MaeIII	GTNAC	8 cut(s)	208, 709, 922, 949, 1371, 1570, 1591, 1636
MalI	GATC	7 cut(s)	16, 471, 1150, 1335, 1398, 1512, 1614
MboI	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
MboII	GAAGA	6 cut(s)	36, 158, 251, 815, 835, 1450
MfeI	CAATTG	4 cut(s)	189, 812, 1376, 1652
MflI	RGATCY	2 cut(s)	1333, 1510
MhlI	GDGCHC	3 cut(s)	121, 501, 1092
MlyI	GAGTC	1 cut(s)	785
MmeI	TCCRAC	3 cut(s)	459, 663, 1662
Mph1103I	ATGCAT	1 cut(s)	1080
MroI	TCCGGA	1 cut(s)	1145
MseI	TTAA	6 cut(s)	438, 867, 906, 990, 1125, 1290
MslI	CAYNNNNRTG	2 cut(s)	777, 1083
MspA1I	CMGCKG	3 cut(s)	233, 338, 1517
MspCI	CTTAAG	1 cut(s)	905
MspI	CCGG	3 cut(s)	121, 381, 1146
MspR9I	CCNGG	6 cut(s)	62, 121, 182, 269, 489, 1476
MunI	CAATTG	4 cut(s)	189, 812, 1376, 1652
Mva1269I	GAATGC	1 cut(s)	571
MvaI	CCWGG	5 cut(s)	62, 182, 269, 489, 1476
MvnI	CGCG	1 cut(s)	309
MwoI	GCNNNNNNNGC	7 cut(s)	344, 532, 970, 1075, 1181, 1195, 1282
NciI	CCSGG	1 cut(s)	121
NcoI	CCATGG	1 cut(s)	1562
NdeII	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
NlaIV	GGNNCC	2 cut(s)	408, 1335
NmuCI	GTSAC	6 cut(s)	208, 922, 949, 1570, 1591, 1636
NsiI	ATGCAT	1 cut(s)	1080
NspI	RCATGY	2 cut(s)	754, 1008
PagI	TCATGA	1 cut(s)	822
PciI	ACATGT	1 cut(s)	750
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PctI	GAATGC	1 cut(s)	571
PfeI	GAWTC	4 cut(s)	52, 149, 167, 254
PflMI	CCANNNNNTGG	1 cut(s)	581
PfoI	TCCNGGA	1 cut(s)	180
PkrI	GCNGC	7 cut(s)	232, 337, 589, 1174, 1177, 1287, 1351
PleI	GAGTC	1 cut(s)	785
PmaCI	CACGTG	1 cut(s)	1181
PmlI	CACGTG	1 cut(s)	1181
PpsI	GAGTC	1 cut(s)	785
Ppu21I	YACGTR	5 cut(s)	8, 777, 1181, 1355, 1487
PscI	ACATGT	1 cut(s)	750
PshAI	GACNNNNGTC	1 cut(s)	361
PshBI	ATTAAT	1 cut(s)	1125
PsiI	TTATAA	1 cut(s)	1532
Psp124BI	GAGCTC	1 cut(s)	1092
Psp6I	CCWGG	5 cut(s)	60, 180, 267, 487, 1474
PspCI	CACGTG	1 cut(s)	1181
PspEI	GGTNACC	2 cut(s)	949, 1636
PspFI	CCCAGC	2 cut(s)	1110, 1517
PspGI	CCWGG	5 cut(s)	60, 180, 267, 487, 1474
PspN4I	GGNNCC	2 cut(s)	408, 1335
PspPI	GGNCC	4 cut(s)	356, 373, 406, 1403
PstI	CTGCAG	1 cut(s)	1177
PstNI	CAGNNNCTG	2 cut(s)	233, 338
PsuI	RGATCY	2 cut(s)	1333, 1510
PvuII	CAGCTG	3 cut(s)	233, 338, 1517
RsaI	GTAC	5 cut(s)	6, 749, 1344, 1357, 1473
RsaNI	GTAC	5 cut(s)	5, 748, 1343, 1356, 1472
RseI	CAYNNNNRTG	2 cut(s)	777, 1083
SacI	GAGCTC	1 cut(s)	1092
SaqAI	TTAA	6 cut(s)	438, 867, 906, 990, 1125, 1290
SatI	GCNGC	7 cut(s)	231, 336, 588, 1173, 1176, 1286, 1350
Sau3AI	GATC	7 cut(s)	14, 469, 1148, 1333, 1396, 1510, 1612
Sau96I	GGNCC	4 cut(s)	356, 373, 406, 1403
SchI	GAGTC	1 cut(s)	785
ScrFI	CCNGG	6 cut(s)	62, 121, 182, 269, 489, 1476
SduI	GDGCHC	3 cut(s)	121, 501, 1092
SfaNI	GCATC	3 cut(s)	513, 1159, 1558
SfcI	CTRYAG	1 cut(s)	1173
SinI	GGWCC	3 cut(s)	356, 406, 1403
SmiMI	CAYNNNNRTG	2 cut(s)	777, 1083
SmlI	CTYRAG	1 cut(s)	905
SmoI	CTYRAG	1 cut(s)	905
SnaBI	TACGTA	1 cut(s)	8
SsiI	CCGC	1 cut(s)	526
SspI	AATATT	1 cut(s)	1129
SspMI	CTAG	1 cut(s)	927
SstI	GAGCTC	1 cut(s)	1092
StyD4I	CCNGG	6 cut(s)	60, 119, 180, 267, 487, 1474
StyI	CCWWGG	5 cut(s)	78, 402, 998, 1213, 1562
TaaI	ACNGT	4 cut(s)	208, 363, 893, 1689
TaiI	ACGT	6 cut(s)	10, 779, 1183, 1210, 1357, 1489
TaqI	TCGA	3 cut(s)	13, 743, 1156
TatI	WGTACW	1 cut(s)	747
TfiI	GAWTC	4 cut(s)	52, 149, 167, 254
Tru1I	TTAA	6 cut(s)	438, 867, 906, 990, 1125, 1290
Tru9I	TTAA	6 cut(s)	438, 867, 906, 990, 1125, 1290
TscAI	CASTG	2 cut(s)	1237, 1303
TseFI	GTSAC	6 cut(s)	208, 922, 949, 1570, 1591, 1636
TseI	GCWGC	7 cut(s)	230, 335, 587, 1172, 1175, 1285, 1349
Tsp45I	GTSAC	6 cut(s)	208, 922, 949, 1570, 1591, 1636
TspGWI	ACGGA	2 cut(s)	227, 332
TspRI	CASTG	2 cut(s)	1237, 1303
Van91I	CCANNNNNTGG	1 cut(s)	581
Vha464I	CTTAAG	1 cut(s)	905
VpaK11BI	GGWCC	3 cut(s)	356, 406, 1403
VspI	ATTAAT	1 cut(s)	1125
XapI	RAATTY	2 cut(s)	838, 863
XceI	RCATGY	2 cut(s)	754, 1008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	779
XmiI	GTMKAC	1 cut(s)	1096
XspI	CTAG	1 cut(s)	927
Zsp2I	ATGCAT	1 cut(s)	1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.