Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009642

Physical Location & Seq

Genomic Coordinates Forward (+)

9066636 .. 9074174

Gene Structure 7539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG111100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGTACGTATACGATCATCAGGCCACGATTTCAAGCCTTCGTCTTCTCCGATTCCAAACCAGGAAATGAGTGAAACCAAGGAAAAGGGGGATACTGGAGAGGATATAGCAGTTGATGGTTCAGATAGTGCCCGAAAAACCGACAATAGTGAGCAGGAATATTCTTTTCATTCTGTGGAATCTGGACAAGTCCATGAAACAATTGACAATGGAGAAACTGTACCCGAAAAGACGGATATTGAGATGACAGCAGCTGATGAAGATAATGTAGTAGAATCTGGAAAAGGCCAGGAAACGCCAAAACCAACTGACAATGGAGAAACTCTACGCGAAAACACGGATATTGAGATGACAGCAGCTGATGACGCTAATGTAGGACCACAGTCCACTTCGGGCCAATCCAATCAAGAGCCTCCTCCTCCCTTGGTCCCAGAAAAGGGAGATGATGGAGAGTTAGTTAAGCAGGGTGGTGATACCTTGAATGATGATGATCAAGAGTTGGACAAGCCAGGTGATGAGCCCCCGTCAGATGTAAAGGCTGACATGCGGGAGTTGCCCCTAAATAGTGATAATGGCTATGAGGAGAATGCTGAACCAAATAGTGGTGCTGCTGGAGATATCATAACTGCAAGCAATAATGAACCTGCTACGCCTCATGCTGGATTTTCTGATATAAAAGATGAAAATAAGAATGGGAAAGAGTTGGAGAATAAGGTGAATGGAAAAGAAGTTACTACACCCATGAACAATGGAAAGTCAAGCTCGAAGTACATGTTTCTTTCCGATGACAGCCACACGTATGATGGTAATGACTCTGGGACAGAAGAGGAACAATTGGATTTCATGAAGGAGATTGAAAATTTCTTCAAGGAGAGGAGCATGGAATTTAAACCTCCTAAGTTCTATGGAGACTGTGTGAATTGCCTTAAGCTGTATAGAATTGTGACTAGACTGGGAGGCTATGATAAGGTGACCTCATCTAAGCTGTGGAGGCAAGTGGGAGCGTCCTTTAAACCTCCAAGGACATGCACTACAATTTCATGGTCATTCAGAGGTTTCTACGAGAAGGCACTCCTTGATTATGAAAAGCATGAAATGCATGGTGGTGAGCTCAGTATACCTATCCCTTCCCAGCCAAAGCCTATTAATATTGATAATCGGGCTTCCGGATCAGGTAGAACAAGAAGGGATGCTGCAGCACGTGCCATGCAAGGTTGGCACTCACAACGTCTCCTTGGTAATGGTGAAGTCAGTGAACCGATCATAAAGGATAAAAATGCTAATGCTTTGCAAAAGCAAGAAAAGCAGCTTAAAACCAGTGGTTCACATAAAAGAAAGAAGCCACCCAATGTGGATCCCGTGGTACAAGCTGCACGTACTAAACCAACAAAGTTACAATTGGATGTAGATGTTTCTGATCTCGGACCTCCAGCAGATTGGGTGAAGGTCAATGTGCAGAAGACTAAAGATTGTTTTGAGGTCTATGCTTTAGTACCAGGACTTCTACGTGAGGAGGTGCGTGTTCAGACAGATCCAGCTGGGCGACTGGTTATAAGTGGTGAACCTGAGCATCCTGATAATCCATGGGGTGTCACACCTTTCAAAAAGGCTGTGTCCTTACCATCCAGAATTGATCCTCACCATACATCGGCCGTGGTCACCCTGCATGGACAATTGTTTGTTCGTGTCCCGTTTGAGCAGTTGGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

570

Amino Acids

62.84

Weight (kDa)

4.89

Isoelectric Point (pI)

37.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARID	PF01388	278 - 362	2.2e-19	ARID/BRIGHT DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009642)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750
malus_domestica	MD02G1107900.v1.1 MD15G1227400.v1.1
prunus_persica	Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1
pyrus_communis	pycom02g08670 pycom15g20240
rosa_chinensis	RchiOBHm_Chr2g0096711
rosa_laevigata	RLG00000016664
rosa_multiflora	Rmu_ssc0000215.1_g000063
rosa_roxburghii	Rroxscaffold_2G00145390
rosa_rugosa	Rorug02G0060000 Rorug02G0060100
rosa_samantha	Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100
rosa_wichuraiana	Rw2G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1553
Acc36I	ACCTGC	1 cut(s)	652
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccI	GTMKAC	2 cut(s)	10, 1117
AccII	CGCG	1 cut(s)	330
AccIII	TCCGGA	1 cut(s)	1166
AciI	CCGC	1 cut(s)	547
AclWI	GGATC	5 cut(s)	1177, 1349, 1362, 1526, 1628
AcoI	YGGCCR	1 cut(s)	1650
AcsI	RAATTY	2 cut(s)	859, 884
AcvI	CACGTG	1 cut(s)	1202
AfaI	GTAC	6 cut(s)	6, 222, 770, 1365, 1378, 1494
AfiI	CCNNNNNNNGG	5 cut(s)	436, 437, 602, 659, 1648
AflII	CTTAAG	1 cut(s)	926
AflIII	ACRYGT	2 cut(s)	771, 795
AgsI	TTSAA	5 cut(s)	34, 481, 857, 868, 1603
AjnI	CCWGG	4 cut(s)	60, 288, 508, 1495
AluBI	AGCT	9 cut(s)	254, 359, 762, 931, 985, 1111, 1309, 1370, 1538
AluI	AGCT	9 cut(s)	254, 359, 762, 931, 985, 1111, 1309, 1370, 1538
Alw21I	GWGCWC	1 cut(s)	1113
Alw26I	GTCTC	2 cut(s)	903, 1235
AlwI	GGATC	5 cut(s)	1177, 1349, 1362, 1526, 1628
AlwNI	CAGNNNCTG	2 cut(s)	254, 359
Aor13HI	TCCGGA	1 cut(s)	1166
AoxI	GGCC	4 cut(s)	22, 286, 394, 1650
ApeKI	GCWGC	7 cut(s)	251, 356, 608, 1193, 1196, 1306, 1370
ApoI	RAATTY	2 cut(s)	859, 884
AseI	ATTAAT	1 cut(s)	1146
AspS9I	GGNCC	4 cut(s)	377, 394, 427, 1424
AvaII	GGWCC	3 cut(s)	377, 427, 1424
BaeGI	GKGCMC	1 cut(s)	133
BamHI	GGATCC	1 cut(s)	1354
BanII	GRGCYC	2 cut(s)	522, 1113
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BbrPI	CACGTG	1 cut(s)	1202
BbsI	GAAGAC	2 cut(s)	36, 1466
Bbv12I	GWGCWC	1 cut(s)	1113
BbvI	GCAGC	7 cut(s)	263, 368, 595, 1180, 1208, 1318, 1357
BccI	CCATC	4 cut(s)	110, 440, 797, 1630
BceAI	ACGGC	1 cut(s)	1637
BciT130I	CCWGG	4 cut(s)	62, 290, 510, 1497
BciVI	GTATCC	1 cut(s)	85
BclI	TGATCA	1 cut(s)	490
BcoDI	GTCTC	2 cut(s)	903, 1235
BfaI	CTAG	1 cut(s)	948
BfmI	CTRYAG	1 cut(s)	1194
BfrI	CTTAAG	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	652
BfuI	GTATCC	1 cut(s)	85
BisI	GCNGC	7 cut(s)	252, 357, 609, 1194, 1197, 1307, 1371
BlsI	GCNGC	7 cut(s)	253, 358, 610, 1195, 1198, 1308, 1372
Bme1390I	CCNGG	4 cut(s)	62, 290, 510, 1497
Bme18I	GGWCC	3 cut(s)	377, 427, 1424
BmgT120I	GGNCC	4 cut(s)	377, 394, 427, 1424
BmiI	GGNNCC	2 cut(s)	429, 1356
BmrFI	CCNGG	4 cut(s)	62, 290, 510, 1497
BmrI	ACTGGG	1 cut(s)	962
BmsI	GCATC	2 cut(s)	1180, 1579
BmuI	ACTGGG	1 cut(s)	962
BoxI	GACNNNNGTC	1 cut(s)	382
BpiI	GAAGAC	2 cut(s)	36, 1466
BpmI	CTGGAG	3 cut(s)	117, 633, 1413
Bpu10I	CCTNAGC	1 cut(s)	1566
BsaAI	YACGTR	5 cut(s)	8, 798, 1202, 1376, 1508
BsaBI	GATNNNNATC	1 cut(s)	489
BsaJI	CCNNGG	7 cut(s)	78, 423, 1019, 1234, 1359, 1583, 1653
BsaWI	WCCGGW	1 cut(s)	1166
BsaXI	ACNNNNNCTCC	8 cut(s)	204, 234, 441, 471, 900, 930, 1215, 1245
Bsc4I	CCNNNNNNNGG	5 cut(s)	436, 437, 602, 659, 1648
Bse1I	ACTGG	4 cut(s)	100, 957, 1317, 1551
Bse8I	GATNNNNATC	1 cut(s)	489
BseAI	TCCGGA	1 cut(s)	1166
BseBI	CCWGG	4 cut(s)	62, 290, 510, 1497
BseDI	CCNNGG	7 cut(s)	78, 423, 1019, 1234, 1359, 1583, 1653
BseGI	GGATG	4 cut(s)	1195, 1408, 1570, 1622
BseJI	GATNNNNATC	1 cut(s)	489
BseLI	CCNNNNNNNGG	5 cut(s)	436, 437, 602, 659, 1648
BseMII	CTCAG	2 cut(s)	1126, 1557
BseNI	ACTGG	4 cut(s)	100, 957, 1317, 1551
BseRI	GAGGAG	5 cut(s)	405, 408, 596, 889, 1526
BseSI	GKGCMC	1 cut(s)	133
BseX3I	CGGCCG	1 cut(s)	1650
BseXI	GCAGC	7 cut(s)	263, 368, 595, 1180, 1208, 1318, 1357
BseYI	CCCAGC	2 cut(s)	1131, 1538
BsgI	GTGCAG	2 cut(s)	1356, 1475
Bsh1236I	CGCG	1 cut(s)	330
Bsh1285I	CGRYCG	1 cut(s)	1653
BshFI	GGCC	4 cut(s)	24, 288, 396, 1652
BsiEI	CGRYCG	1 cut(s)	1653
BsiHKAI	GWGCWC	1 cut(s)	1113
BsiSI	CCGG	1 cut(s)	1167
BslFI	GGGAC	3 cut(s)	413, 832, 1673
BslI	CCNNNNNNNGG	5 cut(s)	436, 437, 602, 659, 1648
BsmAI	GTCTC	2 cut(s)	903, 1235
BsmBI	CGTCTC	1 cut(s)	1235
BsmFI	GGGAC	3 cut(s)	413, 832, 1673
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	4 cut(s)	24, 288, 396, 1652
Bsp1286I	GDGCHC	3 cut(s)	133, 522, 1113
Bsp13I	TCCGGA	1 cut(s)	1166
Bsp143I	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
Bsp19I	CCATGG	1 cut(s)	1583
BspACI	CCGC	1 cut(s)	547
BspANI	GGCC	4 cut(s)	24, 288, 396, 1652
BspCNI	CTCAG	2 cut(s)	1125, 1558
BspEI	TCCGGA	1 cut(s)	1166
BspFNI	CGCG	1 cut(s)	330
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	2 cut(s)	429, 1356
BspMAI	CTGCAG	1 cut(s)	1198
BspMI	ACCTGC	1 cut(s)	652
BspPI	GGATC	5 cut(s)	1177, 1349, 1362, 1526, 1628
BspTI	CTTAAG	1 cut(s)	926
BsrI	ACTGG	4 cut(s)	100, 957, 1317, 1551
BssECI	CCNNGG	7 cut(s)	78, 423, 1019, 1234, 1359, 1583, 1653
BssMI	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
BssNAI	GTATAC	2 cut(s)	11, 1118
BssT1I	CCWWGG	5 cut(s)	78, 423, 1019, 1234, 1583
Bst1107I	GTATAC	2 cut(s)	11, 1118
Bst2UI	CCWGG	4 cut(s)	62, 290, 510, 1497
Bst4CI	ACNGT	4 cut(s)	220, 384, 914, 1710
Bst6I	CTCTTC	1 cut(s)	819
BstAFI	CTTAAG	1 cut(s)	926
BstAPI	GCANNNNNTGC	2 cut(s)	1096, 1202
BstBAI	YACGTR	5 cut(s)	8, 798, 1202, 1376, 1508
BstC8I	GCNNGC	1 cut(s)	631
BstDEI	CTNAG	4 cut(s)	897, 981, 1112, 1566
BstDSI	CCRYGG	3 cut(s)	1359, 1583, 1653
BstEII	GGTNACC	2 cut(s)	970, 1657
BstF5I	GGATG	4 cut(s)	1195, 1408, 1570, 1622
BstFNI	CGCG	1 cut(s)	330
BstKTI	GATC	8 cut(s)	17, 493, 1172, 1263, 1357, 1420, 1534, 1636
BstMAI	GTCTC	2 cut(s)	903, 1235
BstMBI	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
BstMCI	CGRYCG	1 cut(s)	1653
BstMWI	GCNNNNNNNGC	7 cut(s)	365, 553, 991, 1096, 1202, 1216, 1303
BstNI	CCWGG	4 cut(s)	62, 290, 510, 1497
BstNSI	RCATGY	3 cut(s)	547, 775, 1029
BstPAI	GACNNNNGTC	1 cut(s)	382
BstPI	GGTNACC	2 cut(s)	970, 1657
BstSCI	CCNGG	4 cut(s)	60, 288, 508, 1495
BstSFI	CTRYAG	1 cut(s)	1194
BstSLI	GKGCMC	1 cut(s)	133
BstSNI	TACGTA	1 cut(s)	8
BstUI	CGCG	1 cut(s)	330
BstV1I	GCAGC	7 cut(s)	263, 368, 595, 1180, 1208, 1318, 1357
BstV2I	GAAGAC	2 cut(s)	36, 1466
BstX2I	RGATCY	2 cut(s)	1354, 1531
BstXI	CCANNNNNNTGG	1 cut(s)	1437
BstYI	RGATCY	2 cut(s)	1354, 1531
BstZ17I	GTATAC	2 cut(s)	11, 1118
BstZI	CGGCCG	1 cut(s)	1650
BsuI	GTATCC	1 cut(s)	85
BsuRI	GGCC	4 cut(s)	24, 288, 396, 1652
BtgI	CCRYGG	3 cut(s)	1359, 1583, 1653
BtsCI	GGATG	4 cut(s)	1195, 1408, 1570, 1622
BtsIMutI	CAGTG	2 cut(s)	1258, 1324
BveI	ACCTGC	1 cut(s)	652
Cac8I	GCNNGC	1 cut(s)	631
CaiI	CAGNNNCTG	2 cut(s)	254, 359
CciI	TCATGA	1 cut(s)	843
Cfr13I	GGNCC	4 cut(s)	377, 394, 427, 1424
CseI	GACGC	2 cut(s)	374, 993
Csp6I	GTAC	6 cut(s)	5, 221, 769, 1364, 1377, 1493
CviQI	GTAC	6 cut(s)	5, 221, 769, 1364, 1377, 1493
DdeI	CTNAG	4 cut(s)	897, 981, 1112, 1566
DpnI	GATC	8 cut(s)	16, 492, 1171, 1262, 1356, 1419, 1533, 1635
DpnII	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
DraI	TTTAAA	2 cut(s)	889, 1012
EaeI	YGGCCR	1 cut(s)	1650
EagI	CGGCCG	1 cut(s)	1650
Eam1104I	CTCTTC	1 cut(s)	819
EarI	CTCTTC	1 cut(s)	819
Ecl136II	GAGCTC	1 cut(s)	1111
EclXI	CGGCCG	1 cut(s)	1650
Eco105I	TACGTA	1 cut(s)	8
Eco130I	CCWWGG	5 cut(s)	78, 423, 1019, 1234, 1583
Eco24I	GRGCYC	2 cut(s)	522, 1113
Eco32I	GATATC	1 cut(s)	619
Eco47I	GGWCC	3 cut(s)	377, 427, 1424
Eco52I	CGGCCG	1 cut(s)	1650
Eco53kI	GAGCTC	1 cut(s)	1111
Eco72I	CACGTG	1 cut(s)	1202
Eco91I	GGTNACC	2 cut(s)	970, 1657
EcoICRI	GAGCTC	1 cut(s)	1111
EcoO65I	GGTNACC	2 cut(s)	970, 1657
EcoRII	CCWGG	4 cut(s)	60, 288, 508, 1495
EcoRV	GATATC	1 cut(s)	619
EcoT14I	CCWWGG	5 cut(s)	78, 423, 1019, 1234, 1583
EcoT22I	ATGCAT	1 cut(s)	1101
EcoT38I	GRGCYC	2 cut(s)	522, 1113
ErhI	CCWWGG	5 cut(s)	78, 423, 1019, 1234, 1583
Esp3I	CGTCTC	1 cut(s)	1235
FaqI	GGGAC	3 cut(s)	413, 832, 1673
FauI	CCCGC	1 cut(s)	540
FbaI	TGATCA	1 cut(s)	490
FblI	GTMKAC	2 cut(s)	10, 1117
Fnu4HI	GCNGC	7 cut(s)	252, 357, 609, 1194, 1197, 1307, 1371
FokI	GGATG	4 cut(s)	1202, 1415, 1557, 1609
FriOI	GRGCYC	2 cut(s)	522, 1113
Fsp4HI	GCNGC	7 cut(s)	252, 357, 609, 1194, 1197, 1307, 1371
FspBI	CTAG	1 cut(s)	948
GluI	GCNGC	7 cut(s)	252, 357, 609, 1194, 1197, 1307, 1371
GsaI	CCCAGC	2 cut(s)	1135, 1542
GsuI	CTGGAG	3 cut(s)	117, 633, 1413
HaeIII	GGCC	4 cut(s)	24, 288, 396, 1652
HapII	CCGG	1 cut(s)	1167
HgaI	GACGC	2 cut(s)	374, 993
HinfI	GANTC	4 cut(s)	52, 179, 275, 812
HpaII	CCGG	1 cut(s)	1167
Hpy166II	GTNNAC	6 cut(s)	11, 387, 1118, 1256, 1325, 1562
Hpy188I	TCNGA	9 cut(s)	51, 124, 529, 670, 784, 1052, 1417, 1424, 1527
Hpy188III	TCNNGA	8 cut(s)	183, 279, 407, 494, 844, 1167, 1574, 1626
Hpy8I	GTNNAC	6 cut(s)	11, 387, 1118, 1256, 1325, 1562
HpyAV	CCTTC	6 cut(s)	48, 841, 1060, 1137, 1179, 1438
HpyCH4III	ACNGT	4 cut(s)	220, 384, 914, 1710
HpyCH4IV	ACGT	6 cut(s)	7, 797, 1201, 1228, 1375, 1507
HpyCH4V	TGCA	9 cut(s)	629, 1029, 1099, 1196, 1210, 1291, 1373, 1456, 1666
HpyF10VI	GCNNNNNNNGC	7 cut(s)	365, 553, 991, 1096, 1202, 1216, 1303
HpyF3I	CTNAG	4 cut(s)	897, 981, 1112, 1566
HpySE526I	ACGT	6 cut(s)	7, 797, 1201, 1228, 1375, 1507
Kpn2I	TCCGGA	1 cut(s)	1166
Ksp22I	TGATCA	1 cut(s)	490
Kzo9I	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
LmnI	GCTCC	2 cut(s)	876, 1001
Lsp1109I	GCAGC	7 cut(s)	263, 368, 595, 1180, 1208, 1318, 1357
LweI	GCATC	2 cut(s)	1180, 1579
MaeI	CTAG	1 cut(s)	948
MaeII	ACGT	6 cut(s)	7, 797, 1201, 1228, 1375, 1507
MaeIII	GTNAC	6 cut(s)	730, 943, 970, 1392, 1591, 1657
MalI	GATC	8 cut(s)	16, 492, 1171, 1262, 1356, 1419, 1533, 1635
MboI	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
MboII	GAAGA	5 cut(s)	36, 272, 836, 856, 1471
MfeI	CAATTG	4 cut(s)	201, 833, 1397, 1673
MflI	RGATCY	2 cut(s)	1354, 1531
MhlI	GDGCHC	3 cut(s)	133, 522, 1113
MlyI	GAGTC	1 cut(s)	806
MmeI	TCCRAC	3 cut(s)	480, 684, 1683
Mph1103I	ATGCAT	1 cut(s)	1101
MroI	TCCGGA	1 cut(s)	1166
MseI	TTAA	6 cut(s)	459, 888, 927, 1011, 1146, 1311
MslI	CAYNNNNRTG	2 cut(s)	798, 1104
MspA1I	CMGCKG	3 cut(s)	254, 359, 1538
MspCI	CTTAAG	1 cut(s)	926
MspI	CCGG	1 cut(s)	1167
MspR9I	CCNGG	4 cut(s)	62, 290, 510, 1497
MunI	CAATTG	4 cut(s)	201, 833, 1397, 1673
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	4 cut(s)	62, 290, 510, 1497
MvnI	CGCG	1 cut(s)	330
MwoI	GCNNNNNNNGC	7 cut(s)	365, 553, 991, 1096, 1202, 1216, 1303
NcoI	CCATGG	1 cut(s)	1583
NdeII	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
NlaIV	GGNNCC	2 cut(s)	429, 1356
NmuCI	GTSAC	4 cut(s)	943, 970, 1591, 1657
NsiI	ATGCAT	1 cut(s)	1101
NspI	RCATGY	3 cut(s)	547, 775, 1029
PagI	TCATGA	1 cut(s)	843
PciI	ACATGT	1 cut(s)	771
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PctI	GAATGC	1 cut(s)	592
PfeI	GAWTC	3 cut(s)	52, 179, 275
PflMI	CCANNNNNTGG	1 cut(s)	602
PkrI	GCNGC	7 cut(s)	253, 358, 610, 1195, 1198, 1308, 1372
PleI	GAGTC	1 cut(s)	806
PmaCI	CACGTG	1 cut(s)	1202
PmlI	CACGTG	1 cut(s)	1202
PpsI	GAGTC	1 cut(s)	806
Ppu21I	YACGTR	5 cut(s)	8, 798, 1202, 1376, 1508
PscI	ACATGT	1 cut(s)	771
PshAI	GACNNNNGTC	1 cut(s)	382
PshBI	ATTAAT	1 cut(s)	1146
PsiI	TTATAA	1 cut(s)	1553
Psp124BI	GAGCTC	1 cut(s)	1113
Psp6I	CCWGG	4 cut(s)	60, 288, 508, 1495
PspCI	CACGTG	1 cut(s)	1202
PspEI	GGTNACC	2 cut(s)	970, 1657
PspFI	CCCAGC	2 cut(s)	1131, 1538
PspGI	CCWGG	4 cut(s)	60, 288, 508, 1495
PspN4I	GGNNCC	2 cut(s)	429, 1356
PspPI	GGNCC	4 cut(s)	377, 394, 427, 1424
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	2 cut(s)	254, 359
PsuI	RGATCY	2 cut(s)	1354, 1531
PvuII	CAGCTG	3 cut(s)	254, 359, 1538
RsaI	GTAC	6 cut(s)	6, 222, 770, 1365, 1378, 1494
RsaNI	GTAC	6 cut(s)	5, 221, 769, 1364, 1377, 1493
RseI	CAYNNNNRTG	2 cut(s)	798, 1104
SacI	GAGCTC	1 cut(s)	1113
SaqAI	TTAA	6 cut(s)	459, 888, 927, 1011, 1146, 1311
SatI	GCNGC	7 cut(s)	252, 357, 609, 1194, 1197, 1307, 1371
Sau3AI	GATC	8 cut(s)	14, 490, 1169, 1260, 1354, 1417, 1531, 1633
Sau96I	GGNCC	4 cut(s)	377, 394, 427, 1424
SchI	GAGTC	1 cut(s)	806
ScrFI	CCNGG	4 cut(s)	62, 290, 510, 1497
SduI	GDGCHC	3 cut(s)	133, 522, 1113
SfaNI	GCATC	2 cut(s)	1180, 1579
SfcI	CTRYAG	1 cut(s)	1194
SinI	GGWCC	3 cut(s)	377, 427, 1424
SmiMI	CAYNNNNRTG	2 cut(s)	798, 1104
SmlI	CTYRAG	1 cut(s)	926
SmoI	CTYRAG	1 cut(s)	926
SnaBI	TACGTA	1 cut(s)	8
SsiI	CCGC	1 cut(s)	547
SspI	AATATT	2 cut(s)	161, 1150
SspMI	CTAG	1 cut(s)	948
SstI	GAGCTC	1 cut(s)	1113
StyD4I	CCNGG	4 cut(s)	60, 288, 508, 1495
StyI	CCWWGG	5 cut(s)	78, 423, 1019, 1234, 1583
TaaI	ACNGT	4 cut(s)	220, 384, 914, 1710
TaiI	ACGT	6 cut(s)	10, 800, 1204, 1231, 1378, 1510
TaqI	TCGA	1 cut(s)	764
TatI	WGTACW	1 cut(s)	768
TfiI	GAWTC	3 cut(s)	52, 179, 275
Tru1I	TTAA	6 cut(s)	459, 888, 927, 1011, 1146, 1311
Tru9I	TTAA	6 cut(s)	459, 888, 927, 1011, 1146, 1311
TscAI	CASTG	2 cut(s)	1258, 1324
TseFI	GTSAC	4 cut(s)	943, 970, 1591, 1657
TseI	GCWGC	7 cut(s)	251, 356, 608, 1193, 1196, 1306, 1370
Tsp45I	GTSAC	4 cut(s)	943, 970, 1591, 1657
TspGWI	ACGGA	2 cut(s)	248, 353
TspRI	CASTG	2 cut(s)	1258, 1324
Van91I	CCANNNNNTGG	1 cut(s)	602
Vha464I	CTTAAG	1 cut(s)	926
VpaK11BI	GGWCC	3 cut(s)	377, 427, 1424
VspI	ATTAAT	1 cut(s)	1146
XapI	RAATTY	2 cut(s)	859, 884
XceI	RCATGY	3 cut(s)	547, 775, 1029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	800
XmiI	GTMKAC	2 cut(s)	10, 1117
XspI	CTAG	1 cut(s)	948
Zsp2I	ATGCAT	1 cut(s)	1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.