Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009642

Physical Location & Seq

Genomic Coordinates Reverse (-)

83348897 .. 83354333

Gene Structure 5437 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGAGTGAAACCAAGGAAAAGGAGGATGCTGGAGAGGATATAGCAGTTGATGGTTCAGATAGTGCCCGAAAAACTGAGAATAGTGAGCAGGAAGATTCTTTTCGTTCTGTGGAATCTGGACAAGTCCAGGAAACAATTGACAATGGAGAAACTGTACCCGAAAAGACGGATATTGAGATGACAGCAGCTGATGAAGATAATATGACAGCTGCTGATGAAGCTAATGTAGGACCACAGTCCACTTCGGGCCAATCTGGTCAAGAGCCTCCTCCTCCCTTGGTCCCAGAAAAGGGAGACAACGGAGGGTTAGTTAAGCAGGGTGGTGATACCTTGAATGATGATGATCAAGAGTTGGACAAGCCAGGTGATGAGCCCCGTCAGATTGGTGCTGCTGGAGATATCATAACTGCGAGCAATTATGAACCTGCTACGCCTCATGCTGGATTTTCTGATATAAAAGCTGAAAATAAGAATGGGAAGGAGTTGGAGAATAAGGTGAATGGAAAAGAAGTTACTACACCCATGGACAACGGAAAGTCAAGCTCGAAGTACATGTTTCTTTCCGATGACAGCCACACGTATGATGGTAATGACTCGGGGACAGAAGAGGAACAATTGGATTTCATGAAGGAGATTGAAAATTTCTTCAAGGAGAGGAGCATGGAATTTAAACCTCCCAAGTTCTATGGAGACTGTGTGAATTGCCTTAAGCTGTATAGAATTGTGACTAGACTGGGAGGCTATGATAAGGTGGCCCCAGTTTCAAGTCTGCAAAGTGAGTTGGGATTTCTGGGTCTATCATCTTCTGTTCCCATTTTACCTCACCCTGATTTGTTGTTTTGGGAAGTGAAAAAGGAGAAAGTGGGACATGCACTACGATTTCTTGGTCATTCAGAGGTTTCTACGAGAAGATTTGGGCTGAAGGTCCAAACTTGGTCTGCCCATCTGGCACTCCTTGATTATGAAAAACATGAAATGCATGGTGGTGAGCTCAGTATACCTATCCCTTCCCAGCCAAAGCCTATTAATATTGATAATCGGGCTTCCGGATCAGGTAGAACAAGAAGGGATGCTGCAGCACGTGCCATGCAAGGTTGGCACTCACAACGTCTACTTGGTAATGGTGAAGTCAGTGAACCTATCATAAAGGATAAAAATGCTAATGCTTTGCAAAAGCAAGAAAAACAGCTTAAAACCAGTGGTTCACATAAAAGAAAGAAGCCACCCAATGTGGATCCTGTGGTGCAAGCTGCACGTACTAAACCAACAAAGTTACAATTGGACGTAGCTGTTTCTGATCTCGGACCTCCAGCCGATTGGGTGAAGGTCAATGTGCAGAAGACTAAAGATTGTTTTGAGGTCTATGCTTTAGTACCAGGACTTCTACGTGAGGAGGTGCGTGTTCAGACAGATCCAGCTGGGCGACTGGTTATAAGTGGTGAACCCGAGCATCCTGATAATCCATGGGGTGTCACACCTTTCAAAAAGGCTGTCTCCTTACCATCCAGAATTGATCCTCACCATACATCGGCCGTGGTCACCCTGCATGGACAGTTGTTTGTTCGTGTCCCGTTTGAGCAGTCAGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

530

Amino Acids

58.19

Weight (kDa)

5.11

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARID	PF01388	205 - 252	1e-08	ARID/BRIGHT DNA binding domain
HSP20	PF00011	446 - 529	5.9e-06	Hsp20/alpha crystallin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009642)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750
malus_domestica	MD02G1107900.v1.1 MD15G1227400.v1.1
prunus_persica	Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1
pyrus_communis	pycom02g08670 pycom15g20240
rosa_chinensis	RchiOBHm_Chr2g0096711
rosa_laevigata	RLG00000016664
rosa_multiflora	Rmu_ssc0000215.1_g000063
rosa_roxburghii	Rroxscaffold_2G00145390
rosa_rugosa	Rorug02G0060000 Rorug02G0060100
rosa_samantha	Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100
rosa_wichuraiana	Rw2G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1433
Acc36I	ACCTGC	1 cut(s)	433
AccI	GTMKAC	2 cut(s)	997, 1111
AccIII	TCCGGA	1 cut(s)	1046
AclWI	GGATC	5 cut(s)	1057, 1229, 1242, 1406, 1508
AcoI	YGGCCR	1 cut(s)	1530
AcsI	RAATTY	2 cut(s)	640, 665
AcuI	CTGAAG	1 cut(s)	941
AcvI	CACGTG	1 cut(s)	1082
AfaI	GTAC	4 cut(s)	156, 551, 1258, 1374
AfiI	CCNNNNNNNGG	4 cut(s)	289, 290, 440, 1528
AflII	CTTAAG	1 cut(s)	707
AflIII	ACRYGT	2 cut(s)	552, 576
AgsI	TTSAA	5 cut(s)	334, 638, 649, 765, 1483
AjnI	CCWGG	3 cut(s)	126, 361, 1375
Alw21I	GWGCWC	1 cut(s)	993
Alw26I	GTCTC	3 cut(s)	288, 684, 1498
AlwI	GGATC	5 cut(s)	1057, 1229, 1242, 1406, 1508
AlwNI	CAGNNNCTG	2 cut(s)	188, 212
Ama87I	CYCGRG	2 cut(s)	595, 1445
Aor13HI	TCCGGA	1 cut(s)	1046
AoxI	GGCC	3 cut(s)	247, 753, 1530
ApeKI	GCWGC	6 cut(s)	185, 209, 389, 1073, 1076, 1250
ApoI	RAATTY	2 cut(s)	640, 665
ArsI	GACNNNNNNTTYG	2 cut(s)	1476, 1508
AseI	ATTAAT	1 cut(s)	1026
AspS9I	GGNCC	6 cut(s)	230, 247, 280, 754, 925, 1304
AvaI	CYCGRG	2 cut(s)	595, 1445
AvaII	GGWCC	4 cut(s)	230, 280, 925, 1304
BaeGI	GKGCMC	1 cut(s)	67
BamHI	GGATCC	1 cut(s)	1234
BanII	GRGCYC	2 cut(s)	375, 993
BarI	GAAGNNNNNNTAC	2 cut(s)	1365, 1397
BbrPI	CACGTG	1 cut(s)	1082
BbsI	GAAGAC	1 cut(s)	1346
Bbv12I	GWGCWC	1 cut(s)	993
BbvI	GCAGC	6 cut(s)	196, 197, 376, 1060, 1088, 1237
BccI	CCATC	4 cut(s)	44, 578, 951, 1510
BceAI	ACGGC	1 cut(s)	1517
BciT130I	CCWGG	3 cut(s)	128, 363, 1377
BclI	TGATCA	1 cut(s)	343
BcoDI	GTCTC	3 cut(s)	288, 684, 1498
BfaI	CTAG	1 cut(s)	729
BfmI	CTRYAG	1 cut(s)	1074
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	1 cut(s)	433
BglI	GCCNNNNNGGC	1 cut(s)	947
BisI	GCNGC	6 cut(s)	186, 210, 390, 1074, 1077, 1251
BlsI	GCNGC	6 cut(s)	187, 211, 391, 1075, 1078, 1252
Bme1390I	CCNGG	3 cut(s)	128, 363, 1377
Bme18I	GGWCC	4 cut(s)	230, 280, 925, 1304
BmeT110I	CYCGRG	2 cut(s)	595, 1445
BmgT120I	GGNCC	6 cut(s)	230, 247, 280, 754, 925, 1304
BmiI	GGNNCC	3 cut(s)	282, 756, 1236
BmrFI	CCNGG	3 cut(s)	128, 363, 1377
BmrI	ACTGGG	2 cut(s)	743, 752
BmsI	GCATC	3 cut(s)	16, 1060, 1459
BmuI	ACTGGG	2 cut(s)	743, 752
BoxI	GACNNNNGTC	1 cut(s)	235
BpiI	GAAGAC	1 cut(s)	1346
BpmI	CTGGAG	3 cut(s)	51, 414, 1293
BsaAI	YACGTR	4 cut(s)	579, 1082, 1256, 1388
BsaBI	GATNNNNATC	1 cut(s)	342
BsaJI	CCNNGG	5 cut(s)	12, 276, 522, 1463, 1533
BsaWI	WCCGGW	1 cut(s)	1046
BsaXI	ACNNNNNCTCC	6 cut(s)	138, 168, 294, 324, 681, 711
Bsc4I	CCNNNNNNNGG	4 cut(s)	289, 290, 440, 1528
Bse1I	ACTGG	4 cut(s)	738, 758, 1197, 1431
Bse8I	GATNNNNATC	1 cut(s)	342
BseAI	TCCGGA	1 cut(s)	1046
BseBI	CCWGG	3 cut(s)	128, 363, 1377
BseDI	CCNNGG	5 cut(s)	12, 276, 522, 1463, 1533
BseGI	GGATG	4 cut(s)	31, 1075, 1450, 1502
BseJI	GATNNNNATC	1 cut(s)	342
BseLI	CCNNNNNNNGG	4 cut(s)	289, 290, 440, 1528
BseMII	CTCAG	2 cut(s)	66, 1006
BseNI	ACTGG	4 cut(s)	738, 758, 1197, 1431
BseRI	GAGGAG	4 cut(s)	258, 261, 670, 1406
BseSI	GKGCMC	1 cut(s)	67
BseX3I	CGGCCG	1 cut(s)	1530
BseXI	GCAGC	6 cut(s)	196, 197, 376, 1060, 1088, 1237
BseYI	CCCAGC	2 cut(s)	1011, 1418
BsgI	GTGCAG	2 cut(s)	1236, 1355
Bsh1285I	CGRYCG	1 cut(s)	1533
BshFI	GGCC	3 cut(s)	249, 755, 1532
BsiEI	CGRYCG	1 cut(s)	1533
BsiHKAI	GWGCWC	1 cut(s)	993
BsiHKCI	CYCGRG	2 cut(s)	595, 1445
BsiSI	CCGG	1 cut(s)	1047
BslFI	GGGAC	4 cut(s)	266, 613, 879, 1553
BslI	CCNNNNNNNGG	4 cut(s)	289, 290, 440, 1528
BsmAI	GTCTC	3 cut(s)	288, 684, 1498
BsmFI	GGGAC	4 cut(s)	266, 613, 879, 1553
BsnI	GGCC	3 cut(s)	249, 755, 1532
BsoBI	CYCGRG	2 cut(s)	595, 1445
Bsp1286I	GDGCHC	3 cut(s)	67, 375, 993
Bsp13I	TCCGGA	1 cut(s)	1046
Bsp143I	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
Bsp19I	CCATGG	2 cut(s)	522, 1463
BspANI	GGCC	3 cut(s)	249, 755, 1532
BspCNI	CTCAG	2 cut(s)	67, 1005
BspEI	TCCGGA	1 cut(s)	1046
BspHI	TCATGA	1 cut(s)	624
BspLI	GGNNCC	3 cut(s)	282, 756, 1236
BspMAI	CTGCAG	1 cut(s)	1078
BspMI	ACCTGC	1 cut(s)	433
BspPI	GGATC	5 cut(s)	1057, 1229, 1242, 1406, 1508
BspTI	CTTAAG	1 cut(s)	707
BsrI	ACTGG	4 cut(s)	738, 758, 1197, 1431
BssECI	CCNNGG	5 cut(s)	12, 276, 522, 1463, 1533
BssMI	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
BssNAI	GTATAC	1 cut(s)	998
BssT1I	CCWWGG	4 cut(s)	12, 276, 522, 1463
Bst1107I	GTATAC	1 cut(s)	998
Bst2UI	CCWGG	3 cut(s)	128, 363, 1377
Bst4CI	ACNGT	5 cut(s)	154, 237, 695, 1554, 1590
Bst6I	CTCTTC	1 cut(s)	600
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	1 cut(s)	1082
BstBAI	YACGTR	4 cut(s)	579, 1082, 1256, 1388
BstC8I	GCNNGC	2 cut(s)	412, 1248
BstDEI	CTNAG	2 cut(s)	75, 992
BstDSI	CCRYGG	3 cut(s)	522, 1463, 1533
BstEII	GGTNACC	1 cut(s)	1537
BstF5I	GGATG	4 cut(s)	31, 1075, 1450, 1502
BstKTI	GATC	6 cut(s)	346, 1052, 1237, 1300, 1414, 1516
BstMAI	GTCTC	3 cut(s)	288, 684, 1498
BstMBI	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
BstMCI	CGRYCG	1 cut(s)	1533
BstMWI	GCNNNNNNNGC	4 cut(s)	218, 947, 1082, 1096
BstNI	CCWGG	3 cut(s)	128, 363, 1377
BstNSI	RCATGY	2 cut(s)	556, 872
BstPAI	GACNNNNGTC	1 cut(s)	235
BstPI	GGTNACC	1 cut(s)	1537
BstSCI	CCNGG	3 cut(s)	126, 361, 1375
BstSFI	CTRYAG	1 cut(s)	1074
BstSLI	GKGCMC	1 cut(s)	67
BstV1I	GCAGC	6 cut(s)	196, 197, 376, 1060, 1088, 1237
BstV2I	GAAGAC	1 cut(s)	1346
BstX2I	RGATCY	2 cut(s)	1234, 1411
BstXI	CCANNNNNNTGG	1 cut(s)	1317
BstYI	RGATCY	2 cut(s)	1234, 1411
BstZ17I	GTATAC	1 cut(s)	998
BstZI	CGGCCG	1 cut(s)	1530
BsuRI	GGCC	3 cut(s)	249, 755, 1532
BtgI	CCRYGG	3 cut(s)	522, 1463, 1533
BtsCI	GGATG	4 cut(s)	31, 1075, 1450, 1502
BtsIMutI	CAGTG	2 cut(s)	1138, 1204
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	2 cut(s)	412, 1248
CaiI	CAGNNNCTG	2 cut(s)	188, 212
CciI	TCATGA	1 cut(s)	624
Cfr13I	GGNCC	6 cut(s)	230, 247, 280, 754, 925, 1304
Csp6I	GTAC	4 cut(s)	155, 550, 1257, 1373
CviQI	GTAC	4 cut(s)	155, 550, 1257, 1373
DdeI	CTNAG	2 cut(s)	75, 992
DpnI	GATC	6 cut(s)	345, 1051, 1236, 1299, 1413, 1515
DpnII	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
DraI	TTTAAA	1 cut(s)	670
EaeI	YGGCCR	1 cut(s)	1530
EagI	CGGCCG	1 cut(s)	1530
Eam1104I	CTCTTC	1 cut(s)	600
EarI	CTCTTC	1 cut(s)	600
Ecl136II	GAGCTC	1 cut(s)	991
EclXI	CGGCCG	1 cut(s)	1530
Eco130I	CCWWGG	4 cut(s)	12, 276, 522, 1463
Eco24I	GRGCYC	2 cut(s)	375, 993
Eco32I	GATATC	1 cut(s)	400
Eco47I	GGWCC	4 cut(s)	230, 280, 925, 1304
Eco52I	CGGCCG	1 cut(s)	1530
Eco53kI	GAGCTC	1 cut(s)	991
Eco57I	CTGAAG	1 cut(s)	941
Eco72I	CACGTG	1 cut(s)	1082
Eco88I	CYCGRG	2 cut(s)	595, 1445
Eco91I	GGTNACC	1 cut(s)	1537
EcoICRI	GAGCTC	1 cut(s)	991
EcoO65I	GGTNACC	1 cut(s)	1537
EcoRII	CCWGG	3 cut(s)	126, 361, 1375
EcoRV	GATATC	1 cut(s)	400
EcoT14I	CCWWGG	4 cut(s)	12, 276, 522, 1463
EcoT22I	ATGCAT	1 cut(s)	981
EcoT38I	GRGCYC	2 cut(s)	375, 993
ErhI	CCWWGG	4 cut(s)	12, 276, 522, 1463
FaqI	GGGAC	4 cut(s)	266, 613, 879, 1553
FbaI	TGATCA	1 cut(s)	343
FblI	GTMKAC	2 cut(s)	997, 1111
Fnu4HI	GCNGC	6 cut(s)	186, 210, 390, 1074, 1077, 1251
FokI	GGATG	4 cut(s)	38, 1082, 1437, 1489
FriOI	GRGCYC	2 cut(s)	375, 993
Fsp4HI	GCNGC	6 cut(s)	186, 210, 390, 1074, 1077, 1251
FspBI	CTAG	1 cut(s)	729
GluI	GCNGC	6 cut(s)	186, 210, 390, 1074, 1077, 1251
GsaI	CCCAGC	2 cut(s)	1015, 1422
GsuI	CTGGAG	3 cut(s)	51, 414, 1293
HaeIII	GGCC	3 cut(s)	249, 755, 1532
HapII	CCGG	1 cut(s)	1047
HinfI	GANTC	3 cut(s)	95, 113, 593
HpaII	CCGG	1 cut(s)	1047
Hpy166II	GTNNAC	6 cut(s)	240, 998, 1112, 1136, 1205, 1442
Hpy188I	TCNGA	9 cut(s)	58, 381, 451, 565, 895, 1297, 1304, 1407, 1585
Hpy188III	TCNNGA	7 cut(s)	117, 260, 347, 625, 1047, 1454, 1506
Hpy8I	GTNNAC	6 cut(s)	240, 998, 1112, 1136, 1205, 1442
HpyAV	CCTTC	6 cut(s)	472, 622, 916, 1017, 1059, 1318
HpyCH4III	ACNGT	5 cut(s)	154, 237, 695, 1554, 1590
HpyCH4IV	ACGT	6 cut(s)	578, 1081, 1108, 1255, 1284, 1387
HpyF10VI	GCNNNNNNNGC	4 cut(s)	218, 947, 1082, 1096
HpyF3I	CTNAG	2 cut(s)	75, 992
HpySE526I	ACGT	6 cut(s)	578, 1081, 1108, 1255, 1284, 1387
Kpn2I	TCCGGA	1 cut(s)	1046
Ksp22I	TGATCA	1 cut(s)	343
Kzo9I	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
LmnI	GCTCC	1 cut(s)	657
Lsp1109I	GCAGC	6 cut(s)	196, 197, 376, 1060, 1088, 1237
LweI	GCATC	3 cut(s)	16, 1060, 1459
MaeI	CTAG	1 cut(s)	729
MaeII	ACGT	6 cut(s)	578, 1081, 1108, 1255, 1284, 1387
MaeIII	GTNAC	5 cut(s)	511, 724, 1272, 1471, 1537
MalI	GATC	6 cut(s)	345, 1051, 1236, 1299, 1413, 1515
MboI	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
MboII	GAAGA	7 cut(s)	104, 206, 617, 637, 795, 921, 1351
MfeI	CAATTG	3 cut(s)	135, 614, 1277
MflI	RGATCY	2 cut(s)	1234, 1411
MhlI	GDGCHC	3 cut(s)	67, 375, 993
MluCI	AATT	9 cut(s)	135, 415, 614, 640, 665, 700, 720, 1277, 1509
MlyI	GAGTC	1 cut(s)	587
MmeI	TCCRAC	2 cut(s)	333, 465
Mph1103I	ATGCAT	1 cut(s)	981
MroI	TCCGGA	1 cut(s)	1046
MseI	TTAA	5 cut(s)	312, 669, 708, 1026, 1191
MslI	CAYNNNNRTG	2 cut(s)	579, 984
MspA1I	CMGCKG	3 cut(s)	188, 209, 1418
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	1 cut(s)	1047
MspR9I	CCNGG	3 cut(s)	128, 363, 1377
MunI	CAATTG	3 cut(s)	135, 614, 1277
MvaI	CCWGG	3 cut(s)	128, 363, 1377
MwoI	GCNNNNNNNGC	4 cut(s)	218, 947, 1082, 1096
NcoI	CCATGG	2 cut(s)	522, 1463
NdeII	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
NlaIV	GGNNCC	3 cut(s)	282, 756, 1236
NmuCI	GTSAC	3 cut(s)	724, 1471, 1537
NsiI	ATGCAT	1 cut(s)	981
NspI	RCATGY	2 cut(s)	556, 872
PagI	TCATGA	1 cut(s)	624
PciI	ACATGT	1 cut(s)	552
PfeI	GAWTC	2 cut(s)	95, 113
PfoI	TCCNGGA	1 cut(s)	126
PkrI	GCNGC	6 cut(s)	187, 211, 391, 1075, 1078, 1252
PleI	GAGTC	1 cut(s)	587
PmaCI	CACGTG	1 cut(s)	1082
PmlI	CACGTG	1 cut(s)	1082
PpsI	GAGTC	1 cut(s)	587
Ppu21I	YACGTR	4 cut(s)	579, 1082, 1256, 1388
PscI	ACATGT	1 cut(s)	552
PshAI	GACNNNNGTC	1 cut(s)	235
PshBI	ATTAAT	1 cut(s)	1026
PsiI	TTATAA	1 cut(s)	1433
Psp124BI	GAGCTC	1 cut(s)	993
Psp6I	CCWGG	3 cut(s)	126, 361, 1375
PspCI	CACGTG	1 cut(s)	1082
PspEI	GGTNACC	1 cut(s)	1537
PspFI	CCCAGC	2 cut(s)	1011, 1418
PspGI	CCWGG	3 cut(s)	126, 361, 1375
PspN4I	GGNNCC	3 cut(s)	282, 756, 1236
PspPI	GGNCC	6 cut(s)	230, 247, 280, 754, 925, 1304
PstI	CTGCAG	1 cut(s)	1078
PstNI	CAGNNNCTG	2 cut(s)	188, 212
PsuI	RGATCY	2 cut(s)	1234, 1411
PvuII	CAGCTG	3 cut(s)	188, 209, 1418
RsaI	GTAC	4 cut(s)	156, 551, 1258, 1374
RsaNI	GTAC	4 cut(s)	155, 550, 1257, 1373
RseI	CAYNNNNRTG	2 cut(s)	579, 984
SacI	GAGCTC	1 cut(s)	993
SaqAI	TTAA	5 cut(s)	312, 669, 708, 1026, 1191
SatI	GCNGC	6 cut(s)	186, 210, 390, 1074, 1077, 1251
Sau3AI	GATC	6 cut(s)	343, 1049, 1234, 1297, 1411, 1513
Sau96I	GGNCC	6 cut(s)	230, 247, 280, 754, 925, 1304
SchI	GAGTC	1 cut(s)	587
ScrFI	CCNGG	3 cut(s)	128, 363, 1377
SduI	GDGCHC	3 cut(s)	67, 375, 993
SfaNI	GCATC	3 cut(s)	16, 1060, 1459
SfcI	CTRYAG	1 cut(s)	1074
SinI	GGWCC	4 cut(s)	230, 280, 925, 1304
SmiMI	CAYNNNNRTG	2 cut(s)	579, 984
SmlI	CTYRAG	1 cut(s)	707
SmoI	CTYRAG	1 cut(s)	707
Sse9I	AATT	9 cut(s)	135, 415, 614, 640, 665, 700, 720, 1277, 1509
SspI	AATATT	1 cut(s)	1030
SspMI	CTAG	1 cut(s)	729
SstI	GAGCTC	1 cut(s)	993
StyD4I	CCNGG	3 cut(s)	126, 361, 1375
StyI	CCWWGG	4 cut(s)	12, 276, 522, 1463
TaaI	ACNGT	5 cut(s)	154, 237, 695, 1554, 1590
TaiI	ACGT	6 cut(s)	581, 1084, 1111, 1258, 1287, 1390
TaqI	TCGA	1 cut(s)	545
TasI	AATT	9 cut(s)	135, 415, 614, 640, 665, 700, 720, 1277, 1509
TatI	WGTACW	1 cut(s)	549
TfiI	GAWTC	2 cut(s)	95, 113
Tru1I	TTAA	5 cut(s)	312, 669, 708, 1026, 1191
Tru9I	TTAA	5 cut(s)	312, 669, 708, 1026, 1191
TscAI	CASTG	2 cut(s)	1138, 1204
TseFI	GTSAC	3 cut(s)	724, 1471, 1537
TseI	GCWGC	6 cut(s)	185, 209, 389, 1073, 1076, 1250
Tsp45I	GTSAC	3 cut(s)	724, 1471, 1537
TspDTI	ATGAA	7 cut(s)	207, 231, 435, 613, 641, 978, 987
TspGWI	ACGGA	3 cut(s)	182, 315, 546
TspRI	CASTG	2 cut(s)	1138, 1204
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	4 cut(s)	230, 280, 925, 1304
VspI	ATTAAT	1 cut(s)	1026
XapI	RAATTY	2 cut(s)	640, 665
XceI	RCATGY	2 cut(s)	556, 872
XcmI	CCANNNNNNNNNTGG	1 cut(s)	581
XmiI	GTMKAC	2 cut(s)	997, 1111
XspI	CTAG	1 cut(s)	729
Zsp2I	ATGCAT	1 cut(s)	981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.