Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000215.1

Orthogroup ID

OG0009642

Physical Location & Seq

Genomic Coordinates Reverse (-)

242429 .. 247832

Gene Structure 5404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000215.1_g000063.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

atgagtgaaaccaaggaaaaggaggatactggagaggatatagcagttggtggttcagatagtgcccgaaaaaccgagaatagtgagcaggaagattcttttcattctgtggaatctggacaagtccaggaaacaattgacaatggagaaactgtacccgaaaagacggatattgagatgacagcagctgatgaagataatgtagtagaatctggaaaaggccaggaaaccccaagaccaactgacaatggagaaactctacgcgaaaacacggatattgagatgacagccgctgacgacgctaatgtaggaccacagtccacttcgggccaatccggtcaagagcctcctcctcccttggtcccagaaaagggagatgacggagagttagttaagcagggtggtgataccttgaatgatgatgatcaagagttggacaagccaggtgatgatcccccgtcagatgtaaagactgagatgcgggagttgccccaaaatagtgataatggctatgaggagaatgctgaaccaaatagtggtgctgctggagatatcataactgcaagcaataatgaacctgctacgcctcatgctggattttctgatataaaagctgaaaataagaatgggaaagagttggagaataaggtgaatggaaaagaagttgctacacccatgaacaatggaaagccaagctcgaagtacatgtttctttccgatgacagccacacgtatgatggtaatgactctgggacagaagaggaacaattggatttcatgaaggagattgaaaatttcttcaaggagaggagcatggaatttaagcctcctaagttctatggagactgtgtgaattgccttaagctgtatagaattgtgactagactgggaggctatgataaggtgacctcatcgaagctgtggaggcaagtgggagcgtcctttaaacctccaaggacatgcactacaatttcatggtcattcagaggtttctacgagaaggcactccttgattatgaaaagcatgaaatgcatggtggtgagctcagtatacctatcccttcccagccaaagcctattaatattgataatcaggcttccggatcaggtagaacaagaagggatgctgcagcacgtgccatgcaaggttggcactcacaacgtctccttggtaatggtgaagtcagtgaaccaatcataaaggataaaaatgctaatgctttgcaaaagcaagaaaagcagcttaaaaccagtggttcacataaaagaaagaagccacccaatgtggatcctgtggtacaagctgcacgtactaaaccaacaaagttacaattggatgtagatgtttctgatctcggacctccagcagattgggtgaaggtcaatgtgcagaagactaaagattgttttgaggtctatgctttagtaccaggacttctacgtgaggaggtgcgtgttcagacagatccagcggggcgactggttataagtggtgaacctgagcatcctgataatccatggggtgtcacacctttcaaaaaggctgtctccttaccatccagaattgatcctcaccatacatcggccgtggtcaccctgcatggacaattgtttgttcgtgtcccgtttgagcagtcggaacagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

548

Amino Acids

60.25

Weight (kDa)

4.79

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009642)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750 FvH4_1g09750
malus_domestica	MD02G1107900.v1.1 MD15G1227400.v1.1
prunus_persica	Prupe.7G187900_v2.0.a1 Prupe.7G187900_v2.0.a1
pyrus_communis	pycom02g08670 pycom15g20240
rosa_chinensis	RchiOBHm_Chr2g0096711
rosa_laevigata	RLG00000016664
rosa_multiflora	Rmu_ssc0000215.1_g000063
rosa_roxburghii	Rroxscaffold_2G00145390
rosa_rugosa	Rorug02G0060000 Rorug02G0060100
rosa_samantha	Rh2AG107300 Rh2BG109700 Rh2CG111500 Rh2DG111100
rosa_wichuraiana	Rw2G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1487
Acc36I	ACCTGC	1 cut(s)	586
AccB7I	CCANNNNNTGG	1 cut(s)	536
AccI	GTMKAC	1 cut(s)	1051
AccII	CGCG	1 cut(s)	264
AccIII	TCCGGA	1 cut(s)	1100
AciI	CCGC	3 cut(s)	291, 481, 1472
AclWI	GGATC	6 cut(s)	446, 1111, 1283, 1296, 1460, 1562
AcoI	YGGCCR	1 cut(s)	1584
AcsI	RAATTY	2 cut(s)	793, 818
AcvI	CACGTG	1 cut(s)	1136
AfaI	GTAC	5 cut(s)	156, 704, 1299, 1312, 1428
AfiI	CCNNNNNNNGG	5 cut(s)	370, 371, 536, 593, 1582
AflII	CTTAAG	1 cut(s)	860
AflIII	ACRYGT	2 cut(s)	705, 729
AgsI	TTSAA	4 cut(s)	415, 791, 802, 1537
AjnI	CCWGG	4 cut(s)	126, 222, 442, 1429
AluBI	AGCT	8 cut(s)	188, 614, 696, 865, 919, 1045, 1243, 1304
AluI	AGCT	8 cut(s)	188, 614, 696, 865, 919, 1045, 1243, 1304
Alw21I	GWGCWC	1 cut(s)	1047
Alw26I	GTCTC	3 cut(s)	837, 1169, 1552
AlwI	GGATC	6 cut(s)	446, 1111, 1283, 1296, 1460, 1562
AlwNI	CAGNNNCTG	2 cut(s)	188, 293
Aor13HI	TCCGGA	1 cut(s)	1100
AoxI	GGCC	3 cut(s)	220, 328, 1584
ApeKI	GCWGC	6 cut(s)	185, 542, 1127, 1130, 1240, 1304
ApoI	RAATTY	2 cut(s)	793, 818
ArsI	GACNNNNNNTTYG	2 cut(s)	1530, 1562
AseI	ATTAAT	1 cut(s)	1080
AspS9I	GGNCC	4 cut(s)	311, 328, 361, 1358
AvaII	GGWCC	3 cut(s)	311, 361, 1358
BaeGI	GKGCMC	1 cut(s)	67
BamHI	GGATCC	1 cut(s)	1288
BanII	GRGCYC	1 cut(s)	1047
BarI	GAAGNNNNNNTAC	2 cut(s)	1419, 1451
BbrPI	CACGTG	1 cut(s)	1136
BbsI	GAAGAC	1 cut(s)	1400
Bbv12I	GWGCWC	1 cut(s)	1047
BbvI	GCAGC	6 cut(s)	197, 529, 1114, 1142, 1252, 1291
BccI	CCATC	2 cut(s)	731, 1564
BceAI	ACGGC	1 cut(s)	1571
BciT130I	CCWGG	4 cut(s)	128, 224, 444, 1431
BciVI	GTATCC	1 cut(s)	19
BclI	TGATCA	1 cut(s)	424
BcoDI	GTCTC	3 cut(s)	837, 1169, 1552
BfaI	CTAG	1 cut(s)	882
BfmI	CTRYAG	1 cut(s)	1128
BfrI	CTTAAG	1 cut(s)	860
BfuAI	ACCTGC	1 cut(s)	586
BfuI	GTATCC	1 cut(s)	19
BisI	GCNGC	7 cut(s)	186, 291, 543, 1128, 1131, 1241, 1305
BlsI	GCNGC	7 cut(s)	187, 292, 544, 1129, 1132, 1242, 1306
Bme1390I	CCNGG	4 cut(s)	128, 224, 444, 1431
Bme18I	GGWCC	3 cut(s)	311, 361, 1358
BmgT120I	GGNCC	4 cut(s)	311, 328, 361, 1358
BmiI	GGNNCC	2 cut(s)	363, 1290
BmrFI	CCNGG	4 cut(s)	128, 224, 444, 1431
BmrI	ACTGGG	1 cut(s)	896
BmsI	GCATC	3 cut(s)	468, 1114, 1513
BmuI	ACTGGG	1 cut(s)	896
BoxI	GACNNNNGTC	1 cut(s)	316
BpiI	GAAGAC	1 cut(s)	1400
BpmI	CTGGAG	3 cut(s)	51, 567, 1347
Bpu10I	CCTNAGC	1 cut(s)	1500
BsaAI	YACGTR	4 cut(s)	732, 1136, 1310, 1442
BsaBI	GATNNNNATC	1 cut(s)	423
BsaJI	CCNNGG	6 cut(s)	12, 357, 953, 1168, 1517, 1587
BsaWI	WCCGGW	2 cut(s)	335, 1100
BsaXI	ACNNNNNCTCC	8 cut(s)	138, 168, 375, 405, 834, 864, 1149, 1179
Bsc4I	CCNNNNNNNGG	5 cut(s)	370, 371, 536, 593, 1582
Bse1I	ACTGG	4 cut(s)	34, 891, 1251, 1485
Bse8I	GATNNNNATC	1 cut(s)	423
BseAI	TCCGGA	1 cut(s)	1100
BseBI	CCWGG	4 cut(s)	128, 224, 444, 1431
BseDI	CCNNGG	6 cut(s)	12, 357, 953, 1168, 1517, 1587
BseGI	GGATG	4 cut(s)	1129, 1342, 1504, 1556
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	5 cut(s)	370, 371, 536, 593, 1582
BseMII	CTCAG	3 cut(s)	465, 1060, 1491
BseNI	ACTGG	4 cut(s)	34, 891, 1251, 1485
BseRI	GAGGAG	5 cut(s)	339, 342, 530, 823, 1460
BseSI	GKGCMC	1 cut(s)	67
BseX3I	CGGCCG	1 cut(s)	1584
BseXI	GCAGC	6 cut(s)	197, 529, 1114, 1142, 1252, 1291
BseYI	CCCAGC	1 cut(s)	1065
BsgI	GTGCAG	2 cut(s)	1290, 1409
Bsh1236I	CGCG	1 cut(s)	264
Bsh1285I	CGRYCG	1 cut(s)	1587
BshFI	GGCC	3 cut(s)	222, 330, 1586
BsiEI	CGRYCG	1 cut(s)	1587
BsiHKAI	GWGCWC	1 cut(s)	1047
BsiSI	CCGG	2 cut(s)	336, 1101
BslFI	GGGAC	3 cut(s)	347, 766, 1607
BslI	CCNNNNNNNGG	5 cut(s)	370, 371, 536, 593, 1582
BsmAI	GTCTC	3 cut(s)	837, 1169, 1552
BsmBI	CGTCTC	1 cut(s)	1169
BsmFI	GGGAC	3 cut(s)	347, 766, 1607
BsmI	GAATGC	1 cut(s)	526
BsnI	GGCC	3 cut(s)	222, 330, 1586
Bsp1286I	GDGCHC	2 cut(s)	67, 1047
Bsp13I	TCCGGA	1 cut(s)	1100
Bsp143I	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
Bsp19I	CCATGG	1 cut(s)	1517
BspACI	CCGC	3 cut(s)	291, 481, 1472
BspANI	GGCC	3 cut(s)	222, 330, 1586
BspCNI	CTCAG	3 cut(s)	466, 1059, 1492
BspEI	TCCGGA	1 cut(s)	1100
BspFNI	CGCG	1 cut(s)	264
BspHI	TCATGA	1 cut(s)	777
BspLI	GGNNCC	2 cut(s)	363, 1290
BspMAI	CTGCAG	1 cut(s)	1132
BspMI	ACCTGC	1 cut(s)	586
BspPI	GGATC	6 cut(s)	446, 1111, 1283, 1296, 1460, 1562
BspTI	CTTAAG	1 cut(s)	860
BsrI	ACTGG	4 cut(s)	34, 891, 1251, 1485
BssECI	CCNNGG	6 cut(s)	12, 357, 953, 1168, 1517, 1587
BssMI	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
BssNAI	GTATAC	1 cut(s)	1052
BssT1I	CCWWGG	5 cut(s)	12, 357, 953, 1168, 1517
Bst1107I	GTATAC	1 cut(s)	1052
Bst2UI	CCWGG	4 cut(s)	128, 224, 444, 1431
Bst4CI	ACNGT	4 cut(s)	154, 318, 848, 1644
Bst6I	CTCTTC	1 cut(s)	753
BstAFI	CTTAAG	1 cut(s)	860
BstAPI	GCANNNNNTGC	2 cut(s)	1030, 1136
BstBAI	YACGTR	4 cut(s)	732, 1136, 1310, 1442
BstC8I	GCNNGC	1 cut(s)	565
BstDEI	CTNAG	4 cut(s)	474, 831, 1046, 1500
BstDSI	CCRYGG	2 cut(s)	1517, 1587
BstEII	GGTNACC	2 cut(s)	904, 1591
BstF5I	GGATG	4 cut(s)	1129, 1342, 1504, 1556
BstFNI	CGCG	1 cut(s)	264
BstKTI	GATC	7 cut(s)	427, 454, 1106, 1291, 1354, 1468, 1570
BstMAI	GTCTC	3 cut(s)	837, 1169, 1552
BstMBI	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
BstMCI	CGRYCG	1 cut(s)	1587
BstMWI	GCNNNNNNNGC	7 cut(s)	299, 487, 925, 1030, 1136, 1150, 1237
BstNI	CCWGG	4 cut(s)	128, 224, 444, 1431
BstNSI	RCATGY	2 cut(s)	709, 963
BstPAI	GACNNNNGTC	1 cut(s)	316
BstPI	GGTNACC	2 cut(s)	904, 1591
BstSCI	CCNGG	4 cut(s)	126, 222, 442, 1429
BstSFI	CTRYAG	1 cut(s)	1128
BstSLI	GKGCMC	1 cut(s)	67
BstUI	CGCG	1 cut(s)	264
BstV1I	GCAGC	6 cut(s)	197, 529, 1114, 1142, 1252, 1291
BstV2I	GAAGAC	1 cut(s)	1400
BstX2I	RGATCY	2 cut(s)	1288, 1465
BstXI	CCANNNNNNTGG	1 cut(s)	1371
BstYI	RGATCY	2 cut(s)	1288, 1465
BstZ17I	GTATAC	1 cut(s)	1052
BstZI	CGGCCG	1 cut(s)	1584
BsuI	GTATCC	1 cut(s)	19
BsuRI	GGCC	3 cut(s)	222, 330, 1586
BtgI	CCRYGG	2 cut(s)	1517, 1587
BtsCI	GGATG	4 cut(s)	1129, 1342, 1504, 1556
BtsIMutI	CAGTG	2 cut(s)	1192, 1258
BveI	ACCTGC	1 cut(s)	586
Cac8I	GCNNGC	1 cut(s)	565
CaiI	CAGNNNCTG	2 cut(s)	188, 293
CciI	TCATGA	1 cut(s)	777
Cfr13I	GGNCC	4 cut(s)	311, 328, 361, 1358
CseI	GACGC	2 cut(s)	308, 927
Csp6I	GTAC	5 cut(s)	155, 703, 1298, 1311, 1427
CviQI	GTAC	5 cut(s)	155, 703, 1298, 1311, 1427
DdeI	CTNAG	4 cut(s)	474, 831, 1046, 1500
DpnI	GATC	7 cut(s)	426, 453, 1105, 1290, 1353, 1467, 1569
DpnII	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
DraI	TTTAAA	1 cut(s)	946
EaeI	YGGCCR	1 cut(s)	1584
EagI	CGGCCG	1 cut(s)	1584
Eam1104I	CTCTTC	1 cut(s)	753
EarI	CTCTTC	1 cut(s)	753
Ecl136II	GAGCTC	1 cut(s)	1045
EclXI	CGGCCG	1 cut(s)	1584
Eco130I	CCWWGG	5 cut(s)	12, 357, 953, 1168, 1517
Eco24I	GRGCYC	1 cut(s)	1047
Eco32I	GATATC	1 cut(s)	553
Eco47I	GGWCC	3 cut(s)	311, 361, 1358
Eco52I	CGGCCG	1 cut(s)	1584
Eco53kI	GAGCTC	1 cut(s)	1045
Eco72I	CACGTG	1 cut(s)	1136
Eco91I	GGTNACC	2 cut(s)	904, 1591
EcoICRI	GAGCTC	1 cut(s)	1045
EcoO65I	GGTNACC	2 cut(s)	904, 1591
EcoRII	CCWGG	4 cut(s)	126, 222, 442, 1429
EcoRV	GATATC	1 cut(s)	553
EcoT14I	CCWWGG	5 cut(s)	12, 357, 953, 1168, 1517
EcoT22I	ATGCAT	1 cut(s)	1035
EcoT38I	GRGCYC	1 cut(s)	1047
ErhI	CCWWGG	5 cut(s)	12, 357, 953, 1168, 1517
Esp3I	CGTCTC	1 cut(s)	1169
FaqI	GGGAC	3 cut(s)	347, 766, 1607
FauI	CCCGC	2 cut(s)	474, 1465
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	1 cut(s)	1051
Fnu4HI	GCNGC	7 cut(s)	186, 291, 543, 1128, 1131, 1241, 1305
FokI	GGATG	4 cut(s)	1136, 1349, 1491, 1543
FriOI	GRGCYC	1 cut(s)	1047
Fsp4HI	GCNGC	7 cut(s)	186, 291, 543, 1128, 1131, 1241, 1305
FspBI	CTAG	1 cut(s)	882
GluI	GCNGC	7 cut(s)	186, 291, 543, 1128, 1131, 1241, 1305
GsaI	CCCAGC	1 cut(s)	1069
GsuI	CTGGAG	3 cut(s)	51, 567, 1347
HaeIII	GGCC	3 cut(s)	222, 330, 1586
HapII	CCGG	2 cut(s)	336, 1101
HgaI	GACGC	2 cut(s)	308, 927
HinfI	GANTC	4 cut(s)	95, 113, 209, 746
HpaII	CCGG	2 cut(s)	336, 1101
Hpy166II	GTNNAC	5 cut(s)	321, 1052, 1190, 1259, 1496
Hpy188I	TCNGA	9 cut(s)	58, 463, 604, 718, 986, 1351, 1358, 1461, 1639
Hpy188III	TCNNGA	8 cut(s)	117, 213, 341, 428, 778, 1101, 1508, 1560
Hpy8I	GTNNAC	5 cut(s)	321, 1052, 1190, 1259, 1496
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	5 cut(s)	775, 994, 1071, 1113, 1372
HpyCH4III	ACNGT	4 cut(s)	154, 318, 848, 1644
HpyCH4IV	ACGT	5 cut(s)	731, 1135, 1162, 1309, 1441
HpyCH4V	TGCA	9 cut(s)	563, 963, 1033, 1130, 1144, 1225, 1307, 1390, 1600
HpyF10VI	GCNNNNNNNGC	7 cut(s)	299, 487, 925, 1030, 1136, 1150, 1237
HpyF3I	CTNAG	4 cut(s)	474, 831, 1046, 1500
HpySE526I	ACGT	5 cut(s)	731, 1135, 1162, 1309, 1441
Kpn2I	TCCGGA	1 cut(s)	1100
Ksp22I	TGATCA	1 cut(s)	424
Kzo9I	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
LmnI	GCTCC	2 cut(s)	810, 935
Lsp1109I	GCAGC	6 cut(s)	197, 529, 1114, 1142, 1252, 1291
LweI	GCATC	3 cut(s)	468, 1114, 1513
MaeI	CTAG	1 cut(s)	882
MaeII	ACGT	5 cut(s)	731, 1135, 1162, 1309, 1441
MaeIII	GTNAC	5 cut(s)	877, 904, 1326, 1525, 1591
MalI	GATC	7 cut(s)	426, 453, 1105, 1290, 1353, 1467, 1569
MboI	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
MboII	GAAGA	5 cut(s)	104, 206, 770, 790, 1405
MfeI	CAATTG	4 cut(s)	135, 767, 1331, 1607
MflI	RGATCY	2 cut(s)	1288, 1465
MhlI	GDGCHC	2 cut(s)	67, 1047
MlyI	GAGTC	1 cut(s)	740
MmeI	TCCRAC	3 cut(s)	414, 618, 1617
Mph1103I	ATGCAT	1 cut(s)	1035
MroI	TCCGGA	1 cut(s)	1100
MseI	TTAA	6 cut(s)	393, 822, 861, 945, 1080, 1245
MslI	CAYNNNNRTG	2 cut(s)	732, 1038
MspA1I	CMGCKG	3 cut(s)	188, 293, 1472
MspCI	CTTAAG	1 cut(s)	860
MspI	CCGG	2 cut(s)	336, 1101
MspR9I	CCNGG	4 cut(s)	128, 224, 444, 1431
MunI	CAATTG	4 cut(s)	135, 767, 1331, 1607
Mva1269I	GAATGC	1 cut(s)	526
MvaI	CCWGG	4 cut(s)	128, 224, 444, 1431
MvnI	CGCG	1 cut(s)	264
MwoI	GCNNNNNNNGC	7 cut(s)	299, 487, 925, 1030, 1136, 1150, 1237
NcoI	CCATGG	1 cut(s)	1517
NdeII	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
NlaIV	GGNNCC	2 cut(s)	363, 1290
NmuCI	GTSAC	4 cut(s)	877, 904, 1525, 1591
NsiI	ATGCAT	1 cut(s)	1035
NspI	RCATGY	2 cut(s)	709, 963
PagI	TCATGA	1 cut(s)	777
PciI	ACATGT	1 cut(s)	705
PctI	GAATGC	1 cut(s)	526
PfeI	GAWTC	3 cut(s)	95, 113, 209
PflMI	CCANNNNNTGG	1 cut(s)	536
PfoI	TCCNGGA	1 cut(s)	126
PkrI	GCNGC	7 cut(s)	187, 292, 544, 1129, 1132, 1242, 1306
PleI	GAGTC	1 cut(s)	740
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
PpsI	GAGTC	1 cut(s)	740
Ppu21I	YACGTR	4 cut(s)	732, 1136, 1310, 1442
PscI	ACATGT	1 cut(s)	705
PshAI	GACNNNNGTC	1 cut(s)	316
PshBI	ATTAAT	1 cut(s)	1080
PsiI	TTATAA	1 cut(s)	1487
Psp124BI	GAGCTC	1 cut(s)	1047
Psp6I	CCWGG	4 cut(s)	126, 222, 442, 1429
PspCI	CACGTG	1 cut(s)	1136
PspEI	GGTNACC	2 cut(s)	904, 1591
PspFI	CCCAGC	1 cut(s)	1065
PspGI	CCWGG	4 cut(s)	126, 222, 442, 1429
PspN4I	GGNNCC	2 cut(s)	363, 1290
PspPI	GGNCC	4 cut(s)	311, 328, 361, 1358
PstI	CTGCAG	1 cut(s)	1132
PstNI	CAGNNNCTG	2 cut(s)	188, 293
PsuI	RGATCY	2 cut(s)	1288, 1465
PvuII	CAGCTG	1 cut(s)	188
RsaI	GTAC	5 cut(s)	156, 704, 1299, 1312, 1428
RsaNI	GTAC	5 cut(s)	155, 703, 1298, 1311, 1427
RseI	CAYNNNNRTG	2 cut(s)	732, 1038
SacI	GAGCTC	1 cut(s)	1047
SaqAI	TTAA	6 cut(s)	393, 822, 861, 945, 1080, 1245
SatI	GCNGC	7 cut(s)	186, 291, 543, 1128, 1131, 1241, 1305
Sau3AI	GATC	7 cut(s)	424, 451, 1103, 1288, 1351, 1465, 1567
Sau96I	GGNCC	4 cut(s)	311, 328, 361, 1358
SchI	GAGTC	1 cut(s)	740
ScrFI	CCNGG	4 cut(s)	128, 224, 444, 1431
SduI	GDGCHC	2 cut(s)	67, 1047
SfaNI	GCATC	3 cut(s)	468, 1114, 1513
SfcI	CTRYAG	1 cut(s)	1128
SinI	GGWCC	3 cut(s)	311, 361, 1358
SmiMI	CAYNNNNRTG	2 cut(s)	732, 1038
SmlI	CTYRAG	1 cut(s)	860
SmoI	CTYRAG	1 cut(s)	860
SsiI	CCGC	3 cut(s)	291, 481, 1472
SspI	AATATT	1 cut(s)	1084
SspMI	CTAG	1 cut(s)	882
SstI	GAGCTC	1 cut(s)	1047
StyD4I	CCNGG	4 cut(s)	126, 222, 442, 1429
StyI	CCWWGG	5 cut(s)	12, 357, 953, 1168, 1517
TaaI	ACNGT	4 cut(s)	154, 318, 848, 1644
TaiI	ACGT	5 cut(s)	734, 1138, 1165, 1312, 1444
TaqI	TCGA	2 cut(s)	698, 914
TatI	WGTACW	1 cut(s)	702
TauI	GCSGC	1 cut(s)	293
TfiI	GAWTC	3 cut(s)	95, 113, 209
Tru1I	TTAA	6 cut(s)	393, 822, 861, 945, 1080, 1245
Tru9I	TTAA	6 cut(s)	393, 822, 861, 945, 1080, 1245
TscAI	CASTG	2 cut(s)	1192, 1258
TseFI	GTSAC	4 cut(s)	877, 904, 1525, 1591
TseI	GCWGC	6 cut(s)	185, 542, 1127, 1130, 1240, 1304
Tsp45I	GTSAC	4 cut(s)	877, 904, 1525, 1591
TspDTI	ATGAA	9 cut(s)	92, 207, 588, 692, 766, 794, 963, 1032, 1041
TspGWI	ACGGA	3 cut(s)	182, 287, 396
TspRI	CASTG	2 cut(s)	1192, 1258
Van91I	CCANNNNNTGG	1 cut(s)	536
Vha464I	CTTAAG	1 cut(s)	860
VpaK11BI	GGWCC	3 cut(s)	311, 361, 1358
VspI	ATTAAT	1 cut(s)	1080
XapI	RAATTY	2 cut(s)	793, 818
XceI	RCATGY	2 cut(s)	709, 963
XcmI	CCANNNNNNNNNTGG	1 cut(s)	734
XmiI	GTMKAC	1 cut(s)	1051
XspI	CTAG	1 cut(s)	882
Zsp2I	ATGCAT	1 cut(s)	1035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.