Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002370

Physical Location & Seq

Genomic Coordinates Forward (+)

4615846 .. 4620147

Gene Structure 4302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0060100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGGTGATGTATATATTGAAAATGAAATATCTGAAATGCCTTTAACAGCCTATAACGATACCGTGATGAACACGAATCTAGTCATTGATAGTCTGGGGTTCTTCTCATCAATGGATGACATTTTTGACCGTCTATTGATATTGGCCAGTTATATTGGTCATCGATGTATTCAATTTGTAGAGGATCTTGCCCTCAGAGAAGCTGATAGATACTTGGAGGATTTGGTGAACTTTTCTGCTGGACAGCATTTAAAATCATTGAGACATGGCATTTGTAAATCATTTTCTGAAGGTTCTTCATCGTCTTCAAAACCTTATATTTCTGATCGGGACCATGAAATCTGTGAAAGAAGAGTCTCAGGCTCTAGGGATGAATTCCTTGTAGATATGAGATCTGAGATTGTAGAAACCAACTCCAGTCATGTGGCTATTCCATTCATTTGTAAAGGGTTGATGCTGCCATTGTATGGTTTACAGTTTGCTTGGAGGTTGGCAATGTCTTGTTGGAGAAGTTCTTTCTTATATGCTAGAAGTGCTCATCTGCGAGTTCGTAGCATCGCATCTCGTGTACAGAGAACATTGCGAGGTTCATCTGATGATATTGGATGGTTGCAGCGCATTCCTAGCATGCCTTCTGTAAATGATGGTACAGAAAGATTCTTGGAATTGCTTGCCGGAATAAGGAAGGGAAAGCACGAACTGCCCAACTCATTTGTTTATCTACTAATTCCGGGACTCTTTAGCAATCACAGTCCATTGTATTTTGTTGGAACTAAGAGATTCTTTTCAAAGATGGGTCTAGCATGCCATATTGCGAAAATTCACAGCGAGGTATCTGTTGAGCACAATGCGTGGGAGCTGAAGCAATATATCGAGGAGCTTTACTGGGGATCCGGAAAGCGTGTGATGCTGCTAGGGCACAGCAAGGGTGGTGTTGATGCTGCAGCTGCATTGTCAATCTACTGGAATGATTTGAAAGACAAAGTTGCTGGTTTAGCACTGGTACAGTGTCCATATGGTGGCACTCCTTTAGCTTCTGATATTCTTCGTGAAGGCCAGGTTGCTGACAAAGAAACCCGTAGGATAATGGAGTTTTTGATATGCAAGCTAATCAAGGGTGACATACGGGCACTGGAGGATCTTACATATGACAAAAGGAAGGAGTTCATCATGAAGTACAAGCTTCCAGCAGAGCAAATTCCTCTAATTTCCTTCCATTCTGAGGCTAGCATTGCCCCTGGTGTCCTTGCCACAATGACTCATATAGCTCATGCAGAACTTCCATGGCTTCCCCTTCCAAAATTTGGCAATGAAGAATCGGACAACATTGTTCAAGCAAGTCGCCAGATGCCTGTAGTGATTCCTTTATCTGCGGCAATGGCTGTGTGTGCGCTCCACCTACAACTCAGGTACGGGGAGAAGAGTGATGGATTAGTGACATGCCGTGATGCTGAAGTTCCAGGTTCAGTTGTAGTCAAGCCAGATCGGAAGCTTGACCATGCATGGATGGTTTATTCTTCGAGGAAAAAGAAGGCTAGTGAGGCCGATGCCTCTGAAATGTGTGAGTCTATTTTAACTCTGCTTGTGGAGCTCGGAAAGGGAAAAGCTTTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ARID HSP20

Protein Analysis

538

Amino Acids

60.33

Weight (kDa)

6.64

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63870 AT5G63870 AT5G63870
fragaria_vesca	FvH4_1g09700 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940
malus_domestica	MD02G1108000.v1.1 MD06G1225000.v1.1 MD15G1227500.v1.1
prunus_persica	Prupe.2G305700_v2.0.a1 Prupe.5G201300_v2.0.a1 Prupe.5G202500_v2.0.a1 Prupe.5G202600_v2.0.a1 Prupe.7G187800_v2.0.a1
pyrus_communis	pycom15g20250
rosa_chinensis	RchiOBHm_Chr1g0342291 RchiOBHm_Chr2g0096721 RchiOBHm_Chr4g0402221
rosa_laevigata	RLG00000016665 RLG00000035490
rosa_multiflora	Rmu_co8145630.1_g000001 Rmu_sc0004291.1_g000001 Rmu_sc0007075.1_g000017 Rmu_sc0007466.1_g000009 Rmu_sc0008602.1_g000006 Rmu_ssc0000215.1_g000062
rosa_roxburghii	Rroxscaffold_1G00022100 Rroxscaffold_2G00145380
rosa_rugosa	Rorug02G0060100 Rorug02G0060200 Rorug02G0060300 Rorug02G0222700 Rorug07G0349900
rosa_samantha	Rh2AG107400 Rh2BG109800 Rh2CG111600 Rh2DG111200 Rh4DG017000
rosa_wichuraiana	Rw2G008330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	467, 1019, 1304
AccIII	TCCGGA	1 cut(s)	893
AciI	CCGC	1 cut(s)	1373
AclWI	GGATC	4 cut(s)	192, 885, 898, 1146
AcoI	YGGCCR	1 cut(s)	144
AcsI	RAATTY	4 cut(s)	374, 819, 1197, 1301
AcuI	CTGAAG	3 cut(s)	309, 881, 1473
AfaI	GTAC	5 cut(s)	570, 649, 1005, 1178, 1412
AfiI	CCNNNNNNNGG	5 cut(s)	467, 681, 1019, 1222, 1304
AgsI	TTSAA	7 cut(s)	20, 173, 309, 789, 976, 1334, 1612
AjnI	CCWGG	3 cut(s)	1056, 1237, 1459
Alw21I	GWGCWC	3 cut(s)	538, 846, 1593
Alw26I	GTCTC	2 cut(s)	256, 361
AlwI	GGATC	4 cut(s)	192, 885, 898, 1146
Aor13HI	TCCGGA	1 cut(s)	893
AoxI	GGCC	3 cut(s)	144, 1054, 1542
ApeKI	GCWGC	6 cut(s)	457, 613, 910, 941, 944, 947
ApoI	RAATTY	4 cut(s)	374, 819, 1197, 1301
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
Asp700I	GAANNNNTTC	1 cut(s)	1163
AspLEI	GCGC	2 cut(s)	618, 1393
AspS9I	GGNCC	1 cut(s)	331
AsuC2I	CCSGG	1 cut(s)	732
AsuHPI	GGTGA	3 cut(s)	17, 238, 1130
AsuNHI	GCTAGC	1 cut(s)	1226
AvaII	GGWCC	1 cut(s)	331
BaeGI	GKGCMC	2 cut(s)	921, 1132
BalI	TGGCCA	1 cut(s)	146
BamHI	GGATCC	1 cut(s)	890
BanII	GRGCYC	1 cut(s)	1593
BauI	CACGAG	1 cut(s)	564
BbsI	GAAGAC	1 cut(s)	297
Bbv12I	GWGCWC	3 cut(s)	538, 846, 1593
BbvI	GCAGC	6 cut(s)	444, 625, 897, 928, 934, 956
BccI	CCATC	5 cut(s)	600, 638, 787, 1421, 1501
BceAI	ACGGC	1 cut(s)	1428
BciT130I	CCWGG	3 cut(s)	1058, 1239, 1461
BcnI	CCSGG	1 cut(s)	732
BcoDI	GTCTC	2 cut(s)	256, 361
BfaI	CTAG	8 cut(s)	80, 366, 528, 624, 800, 914, 1227, 1536
BfmI	CTRYAG	2 cut(s)	942, 1353
BglII	AGATCT	1 cut(s)	392
BisI	GCNGC	7 cut(s)	458, 614, 911, 942, 945, 948, 1374
BlsI	GCNGC	7 cut(s)	459, 615, 912, 943, 946, 949, 1375
Bme1390I	CCNGG	4 cut(s)	732, 1058, 1239, 1461
Bme18I	GGWCC	1 cut(s)	331
BmgT120I	GGNCC	1 cut(s)	331
BmiI	GGNNCC	2 cut(s)	332, 892
BmrFI	CCNGG	4 cut(s)	732, 1058, 1239, 1461
BmrI	ACTGGG	1 cut(s)	895
BmsI	GCATC	8 cut(s)	444, 564, 569, 897, 928, 1338, 1438, 1537
BmtI	GCTAGC	1 cut(s)	1230
BmuI	ACTGGG	1 cut(s)	895
BpiI	GAAGAC	1 cut(s)	297
BpmI	CTGGAG	2 cut(s)	400, 1154
BpuMI	CCSGG	1 cut(s)	732
Bsa29I	ATCGAT	1 cut(s)	163
BsaJI	CCNNGG	2 cut(s)	1237, 1283
BsaWI	WCCGGW	1 cut(s)	893
Bsc4I	CCNNNNNNNGG	5 cut(s)	467, 681, 1019, 1222, 1304
Bse1I	ACTGG	6 cut(s)	147, 417, 890, 968, 1005, 1137
Bse3DI	GCAATG	5 cut(s)	501, 578, 1230, 1315, 1383
BseAI	TCCGGA	1 cut(s)	893
BseBI	CCWGG	3 cut(s)	1058, 1239, 1461
BseCI	ATCGAT	1 cut(s)	163
BseDI	CCNNGG	2 cut(s)	1237, 1283
BseGI	GGATG	4 cut(s)	121, 376, 611, 1512
BseLI	CCNNNNNNNGG	5 cut(s)	467, 681, 1019, 1222, 1304
BseMI	GCAATG	5 cut(s)	501, 578, 1230, 1315, 1383
BseMII	CTCAG	5 cut(s)	208, 372, 387, 1212, 1420
BseNI	ACTGG	6 cut(s)	147, 417, 890, 968, 1005, 1137
BseRI	GAGGAG	1 cut(s)	890
BseSI	GKGCMC	2 cut(s)	921, 1132
BseXI	GCAGC	6 cut(s)	444, 625, 897, 928, 934, 956
BshFI	GGCC	3 cut(s)	146, 1056, 1544
BshVI	ATCGAT	1 cut(s)	163
BsiHKAI	GWGCWC	3 cut(s)	538, 846, 1593
BsiSI	CCGG	3 cut(s)	675, 731, 894
BslFI	GGGAC	2 cut(s)	344, 747
BslI	CCNNNNNNNGG	5 cut(s)	467, 681, 1019, 1222, 1304
BsmAI	GTCTC	2 cut(s)	256, 361
BsmFI	GGGAC	2 cut(s)	344, 747
BsmI	GAATGC	1 cut(s)	618
BsnI	GGCC	3 cut(s)	146, 1056, 1544
Bsp1286I	GDGCHC	5 cut(s)	538, 846, 921, 1132, 1593
Bsp13I	TCCGGA	1 cut(s)	893
Bsp1407I	TGTACA	1 cut(s)	568
Bsp143I	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
Bsp19I	CCATGG	1 cut(s)	1283
BspACI	CCGC	1 cut(s)	1373
BspANI	GGCC	3 cut(s)	146, 1056, 1544
BspCNI	CTCAG	5 cut(s)	207, 371, 388, 1213, 1419
BspDI	ATCGAT	1 cut(s)	163
BspEI	TCCGGA	1 cut(s)	893
BspHI	TCATGA	1 cut(s)	1170
BspLI	GGNNCC	2 cut(s)	332, 892
BspMAI	CTGCAG	1 cut(s)	946
BspOI	GCTAGC	1 cut(s)	1230
BspPI	GGATC	4 cut(s)	192, 885, 898, 1146
BsrDI	GCAATG	5 cut(s)	501, 578, 1230, 1315, 1383
BsrGI	TGTACA	1 cut(s)	568
BsrI	ACTGG	6 cut(s)	147, 417, 890, 968, 1005, 1137
BssECI	CCNNGG	2 cut(s)	1237, 1283
BssMI	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
BssSI	CACGAG	1 cut(s)	564
BssT1I	CCWWGG	1 cut(s)	1283
Bst2BI	CACGAG	1 cut(s)	564
Bst2UI	CCWGG	3 cut(s)	1058, 1239, 1461
Bst4CI	ACNGT	5 cut(s)	64, 131, 477, 752, 1008
Bst6I	CTCTTC	2 cut(s)	346, 1415
BstAPI	GCANNNNNTGC	1 cut(s)	700
BstAUI	TGTACA	1 cut(s)	568
BstC8I	GCNNGC	5 cut(s)	629, 672, 805, 1106, 1228
BstDEI	CTNAG	6 cut(s)	194, 358, 396, 774, 1221, 1406
BstDSI	CCRYGG	1 cut(s)	1283
BstF5I	GGATG	4 cut(s)	121, 376, 611, 1512
BstHHI	GCGC	2 cut(s)	618, 1393
BstKTI	GATC	6 cut(s)	187, 328, 395, 893, 1141, 1486
BstMAI	GTCTC	2 cut(s)	256, 361
BstMBI	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
BstNI	CCWGG	3 cut(s)	1058, 1239, 1461
BstNSI	RCATGY	3 cut(s)	631, 807, 1443
BstSCI	CCNGG	4 cut(s)	730, 1056, 1237, 1459
BstSFI	CTRYAG	2 cut(s)	942, 1353
BstSLI	GKGCMC	2 cut(s)	921, 1132
BstV1I	GCAGC	6 cut(s)	444, 625, 897, 928, 934, 956
BstV2I	GAAGAC	1 cut(s)	297
BstX2I	RGATCY	4 cut(s)	184, 392, 890, 1138
BstXI	CCANNNNNNTGG	1 cut(s)	424
BstYI	RGATCY	4 cut(s)	184, 392, 890, 1138
Bsu15I	ATCGAT	1 cut(s)	163
BsuRI	GGCC	3 cut(s)	146, 1056, 1544
BsuTUI	ATCGAT	1 cut(s)	163
BtgI	CCRYGG	1 cut(s)	1283
BtgZI	GCGATG	1 cut(s)	541
BtsCI	GGATG	4 cut(s)	121, 376, 611, 1512
BtsIMutI	CAGTG	3 cut(s)	998, 1013, 1130
Cac8I	GCNNGC	5 cut(s)	629, 672, 805, 1106, 1228
CciI	TCATGA	1 cut(s)	1170
CfoI	GCGC	2 cut(s)	618, 1393
Cfr13I	GGNCC	1 cut(s)	331
ClaI	ATCGAT	1 cut(s)	163
Csp6I	GTAC	5 cut(s)	569, 648, 1004, 1177, 1411
CviQI	GTAC	5 cut(s)	569, 648, 1004, 1177, 1411
DdeI	CTNAG	6 cut(s)	194, 358, 396, 774, 1221, 1406
DpnI	GATC	6 cut(s)	186, 327, 394, 892, 1140, 1485
DpnII	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
DraI	TTTAAA	1 cut(s)	252
EaeI	YGGCCR	1 cut(s)	144
Eam1104I	CTCTTC	2 cut(s)	346, 1415
EarI	CTCTTC	2 cut(s)	346, 1415
Ecl136II	GAGCTC	1 cut(s)	1591
Eco130I	CCWWGG	1 cut(s)	1283
Eco24I	GRGCYC	1 cut(s)	1593
Eco47I	GGWCC	1 cut(s)	331
Eco53kI	GAGCTC	1 cut(s)	1591
Eco57I	CTGAAG	3 cut(s)	309, 881, 1473
EcoICRI	GAGCTC	1 cut(s)	1591
EcoRI	GAATTC	1 cut(s)	374
EcoRII	CCWGG	3 cut(s)	1056, 1237, 1459
EcoT14I	CCWWGG	1 cut(s)	1283
EcoT22I	ATGCAT	1 cut(s)	1504
EcoT38I	GRGCYC	1 cut(s)	1593
ErhI	CCWWGG	1 cut(s)	1283
FalI	AAGNNNNNCTT	2 cut(s)	767, 799
FaqI	GGGAC	2 cut(s)	344, 747
FauNDI	CATATG	2 cut(s)	1015, 1147
Fnu4HI	GCNGC	7 cut(s)	458, 614, 911, 942, 945, 948, 1374
FokI	GGATG	4 cut(s)	128, 383, 618, 1519
FriOI	GRGCYC	1 cut(s)	1593
Fsp4HI	GCNGC	7 cut(s)	458, 614, 911, 942, 945, 948, 1374
FspBI	CTAG	8 cut(s)	80, 366, 528, 624, 800, 914, 1227, 1536
GlaI	GCGC	2 cut(s)	617, 1392
GluI	GCNGC	7 cut(s)	458, 614, 911, 942, 945, 948, 1374
GsuI	CTGGAG	2 cut(s)	400, 1154
HaeIII	GGCC	3 cut(s)	146, 1056, 1544
HapII	CCGG	3 cut(s)	675, 731, 894
HhaI	GCGC	2 cut(s)	618, 1393
Hin6I	GCGC	2 cut(s)	616, 1391
HinP1I	GCGC	2 cut(s)	616, 1391
HindIII	AAGCTT	3 cut(s)	1181, 1490, 1605
HinfI	GANTC	9 cut(s)	76, 354, 657, 735, 780, 1258, 1316, 1360, 1565
HpaII	CCGG	3 cut(s)	675, 731, 894
HphI	GGTGA	3 cut(s)	17, 238, 1130
Hpy166II	GTNNAC	3 cut(s)	229, 473, 569
Hpy188III	TCNNGA	4 cut(s)	329, 894, 1049, 1171
Hpy8I	GTNNAC	3 cut(s)	229, 473, 569
HpyAV	CCTTC	8 cut(s)	284, 642, 679, 1046, 1153, 1222, 1304, 1525
HpyCH4III	ACNGT	5 cut(s)	64, 131, 477, 752, 1008
HpyCH4V	TGCA	6 cut(s)	613, 944, 950, 1104, 1274, 1502
HpyF3I	CTNAG	6 cut(s)	194, 358, 396, 774, 1221, 1406
HspAI	GCGC	2 cut(s)	616, 1391
Kpn2I	TCCGGA	1 cut(s)	893
Kzo9I	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
LmnI	GCTCC	4 cut(s)	856, 877, 1398, 1588
Lsp1109I	GCAGC	6 cut(s)	444, 625, 897, 928, 934, 956
LweI	GCATC	8 cut(s)	444, 564, 569, 897, 928, 1338, 1438, 1537
MaeI	CTAG	8 cut(s)	80, 366, 528, 624, 800, 914, 1227, 1536
MaeIII	GTNAC	2 cut(s)	1118, 1435
MalI	GATC	6 cut(s)	186, 327, 394, 892, 1140, 1485
MboI	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
MboII	GAAGA	8 cut(s)	94, 288, 297, 363, 1037, 1325, 1432, 1509
MflI	RGATCY	4 cut(s)	184, 392, 890, 1138
MhlI	GDGCHC	5 cut(s)	538, 846, 921, 1132, 1593
MlsI	TGGCCA	1 cut(s)	146
MluCI	AATT	9 cut(s)	173, 374, 665, 726, 819, 1197, 1206, 1301, 1612
MluNI	TGGCCA	1 cut(s)	146
MlyI	GAGTC	4 cut(s)	363, 729, 1252, 1574
MmeI	TCCRAC	2 cut(s)	485, 748
Mox20I	TGGCCA	1 cut(s)	146
Mph1103I	ATGCAT	1 cut(s)	1504
MroI	TCCGGA	1 cut(s)	893
MroXI	GAANNNNTTC	1 cut(s)	1163
MscI	TGGCCA	1 cut(s)	146
MseI	TTAA	3 cut(s)	44, 251, 1574
Msp20I	TGGCCA	1 cut(s)	146
MspA1I	CMGCKG	1 cut(s)	947
MspI	CCGG	3 cut(s)	675, 731, 894
MspR9I	CCNGG	4 cut(s)	732, 1058, 1239, 1461
Mva1269I	GAATGC	1 cut(s)	618
MvaI	CCWGG	3 cut(s)	1058, 1239, 1461
NciI	CCSGG	1 cut(s)	732
NcoI	CCATGG	1 cut(s)	1283
NdeI	CATATG	2 cut(s)	1015, 1147
NdeII	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
NheI	GCTAGC	1 cut(s)	1226
NlaIV	GGNNCC	2 cut(s)	332, 892
NmuCI	GTSAC	2 cut(s)	1118, 1435
NsiI	ATGCAT	1 cut(s)	1504
NspI	RCATGY	3 cut(s)	631, 807, 1443
PaeI	GCATGC	2 cut(s)	631, 807
PagI	TCATGA	1 cut(s)	1170
PctI	GAATGC	1 cut(s)	618
PdmI	GAANNNNTTC	1 cut(s)	1163
PfeI	GAWTC	5 cut(s)	76, 657, 780, 1316, 1360
PflMI	CCANNNNNTGG	3 cut(s)	467, 1019, 1304
PfoI	TCCNGGA	1 cut(s)	730
PkrI	GCNGC	7 cut(s)	459, 615, 912, 943, 946, 949, 1375
PleI	GAGTC	4 cut(s)	362, 729, 1252, 1573
PpsI	GAGTC	4 cut(s)	362, 729, 1252, 1573
Psp124BI	GAGCTC	1 cut(s)	1593
Psp6I	CCWGG	3 cut(s)	1056, 1237, 1459
PspGI	CCWGG	3 cut(s)	1056, 1237, 1459
PspN4I	GGNNCC	2 cut(s)	332, 892
PspPI	GGNCC	1 cut(s)	331
PstI	CTGCAG	1 cut(s)	946
PsuI	RGATCY	4 cut(s)	184, 392, 890, 1138
PvuII	CAGCTG	1 cut(s)	947
RsaI	GTAC	5 cut(s)	570, 649, 1005, 1178, 1412
RsaNI	GTAC	5 cut(s)	569, 648, 1004, 1177, 1411
SacI	GAGCTC	1 cut(s)	1593
SaqAI	TTAA	3 cut(s)	44, 251, 1574
SatI	GCNGC	7 cut(s)	458, 614, 911, 942, 945, 948, 1374
Sau3AI	GATC	6 cut(s)	184, 325, 392, 890, 1138, 1483
Sau96I	GGNCC	1 cut(s)	331
SchI	GAGTC	4 cut(s)	363, 729, 1252, 1574
ScrFI	CCNGG	4 cut(s)	732, 1058, 1239, 1461
SduI	GDGCHC	5 cut(s)	538, 846, 921, 1132, 1593
SfaNI	GCATC	8 cut(s)	444, 564, 569, 897, 928, 1338, 1438, 1537
SfcI	CTRYAG	2 cut(s)	942, 1353
SinI	GGWCC	1 cut(s)	331
SphI	GCATGC	2 cut(s)	631, 807
Sse9I	AATT	9 cut(s)	173, 374, 665, 726, 819, 1197, 1206, 1301, 1612
SsiI	CCGC	1 cut(s)	1373
SspMI	CTAG	8 cut(s)	80, 366, 528, 624, 800, 914, 1227, 1536
SstI	GAGCTC	1 cut(s)	1593
StyD4I	CCNGG	4 cut(s)	730, 1056, 1237, 1459
StyI	CCWWGG	1 cut(s)	1283
TaaI	ACNGT	5 cut(s)	64, 131, 477, 752, 1008
TaqI	TCGA	3 cut(s)	163, 873, 1520
TasI	AATT	9 cut(s)	173, 374, 665, 726, 819, 1197, 1206, 1301, 1612
TatI	WGTACW	2 cut(s)	568, 1176
TauI	GCSGC	1 cut(s)	1376
TfiI	GAWTC	5 cut(s)	76, 657, 780, 1316, 1360
Tru1I	TTAA	3 cut(s)	44, 251, 1574
Tru9I	TTAA	3 cut(s)	44, 251, 1574
TscAI	CASTG	3 cut(s)	1005, 1013, 1137
TseFI	GTSAC	2 cut(s)	1118, 1435
TseI	GCWGC	6 cut(s)	457, 613, 910, 941, 944, 947
Tsp45I	GTSAC	2 cut(s)	1118, 1435
TspRI	CASTG	3 cut(s)	1005, 1013, 1137
Van91I	CCANNNNNTGG	3 cut(s)	467, 1019, 1304
VpaK11BI	GGWCC	1 cut(s)	331
XapI	RAATTY	4 cut(s)	374, 819, 1197, 1301
XceI	RCATGY	3 cut(s)	631, 807, 1443
XmnI	GAANNNNTTC	1 cut(s)	1163
XspI	CTAG	8 cut(s)	80, 366, 528, 624, 800, 914, 1227, 1536
Zsp2I	ATGCAT	1 cut(s)	1504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.