Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002370

Physical Location & Seq

Genomic Coordinates Forward (+)

29127955 .. 29129103

Gene Structure 1149 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G305700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGTCAGTCTTCGACTGGGCTTCTAGAAATCTTAAGCCGACTCAATTGCCAGACGTATTTCCTGTTGAGGTTTTTGATAGTTTGGTCATTTGTGCCTCCCAGATCCTCCAAAAAGAGGCCAATTGCGTCACCATTGACAACTTAGCCTCAGAATCCACAGTCGTCGTCGTCGGAGACCTTCACGGGCAGTTGCACGACCTTCTTTTCCTTCTCCGTGATGCTGGCCTTCCCTCAGAAAATCGATTCTTCGTCTTCAATGGAAATTATGTTGACAGAGGTGCTTGGGGTTTCGAAACTTTCCTAATTGTGTTAGCTTGGAAAGTGTTCATGCCAAAAAGGGTGTATCCTTTGCGTGGAAATCATGAATCAAAGTATTGCACTTCTATTTATGGTTTTGAGAAGGAAGTGTTGACAAAATATAGTGATAGAGGCAAGCATATGTATCGTAGATGTCTTGGGTGCTTTAAAAGTCTTCCTTTGGCTTCCCTCATTGGTAAACATGTGTACACTGCACATGGAGGTGTATTTCGCCACATCCCTGTGATCCCCAGGAAATCAAAGGGAATGAAGAGTCGTAGGATGGCTTTCAATCCTGAATCCAATTCATTATCTTTGGGATCTTTTGAAGAACTAAATAAGGCGAGAAGATCAGTTCTTGATCCTTCATGGGAGGGTTCCAACTTGATTCCCGGCGACGTGATGTGGTCAGATCCTTCAAGGACTCCGGGTCTTTCTTTTAATATCGAGAGAGGAATTGGTTTGACATGGGGTCCTGATTGCACTGATAATTTTCTCAAGAAATTTCAACTAAAGTTGATTATCAGATCGCATGAAGGCCCTGATGCACGAAAAAAGAGACCAAGTCTTGGTGGAATGGATGAAGGGTACACCGTCGATCACATTGTGGAGTCAGGAAAGCTGATCACTTTGTTTAGTGCTCCAGACTACCCACAATTTCAGGGGACAGAGGAGAGGTACAAAAATAAAGGGGCTTACATTATCTTGGAACCCCCTAATTTTGATGATCCTGTATTTCGTAGTTTCGAAGCAATTACTCCAAGACCAAAGGCAGATCCCTTTTACAATTTTGAAGATGTGACTGATGCTGATGAAGAGCTGGGCTTGGCATCAATGGTGACCAGTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

383

Amino Acids

43.12

Weight (kDa)

6.77

Isoelectric Point (pI)

41.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63870 AT5G63870 AT5G63870
fragaria_vesca	FvH4_1g09700 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940
malus_domestica	MD02G1108000.v1.1 MD06G1225000.v1.1 MD15G1227500.v1.1
prunus_persica	Prupe.2G305700_v2.0.a1 Prupe.5G201300_v2.0.a1 Prupe.5G202500_v2.0.a1 Prupe.5G202600_v2.0.a1 Prupe.7G187800_v2.0.a1
pyrus_communis	pycom15g20250
rosa_chinensis	RchiOBHm_Chr1g0342291 RchiOBHm_Chr2g0096721 RchiOBHm_Chr4g0402221
rosa_laevigata	RLG00000016665 RLG00000035490
rosa_multiflora	Rmu_co8145630.1_g000001 Rmu_sc0004291.1_g000001 Rmu_sc0007075.1_g000017 Rmu_sc0007466.1_g000009 Rmu_sc0008602.1_g000006 Rmu_ssc0000215.1_g000062
rosa_roxburghii	Rroxscaffold_1G00022100 Rroxscaffold_2G00145380
rosa_rugosa	Rorug02G0060100 Rorug02G0060200 Rorug02G0060300 Rorug02G0222700 Rorug07G0349900
rosa_samantha	Rh2AG107400 Rh2BG109800 Rh2CG111600 Rh2DG111200 Rh4DG017000
rosa_wichuraiana	Rw2G008330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	866
AclWI	GGATC	7 cut(s)	97, 538, 625, 653, 704, 1019, 1067
AcsI	RAATTY	1 cut(s)	800
AdeI	CACNNNGTG	1 cut(s)	904
AfaI	GTAC	3 cut(s)	506, 887, 977
AfiI	CCNNNNNNNGG	3 cut(s)	115, 353, 866
AflII	CTTAAG	1 cut(s)	32
AflIII	ACRYGT	1 cut(s)	499
AgsI	TTSAA	6 cut(s)	256, 589, 626, 717, 806, 1091
AhdI	GACNNNNNGTC	2 cut(s)	726, 768
AjiI	CACGTC	1 cut(s)	697
AjnI	CCWGG	1 cut(s)	548
AluBI	AGCT	3 cut(s)	314, 919, 1117
AluI	AGCT	3 cut(s)	314, 919, 1117
Alw21I	GWGCWC	1 cut(s)	940
Alw26I	GTCTC	2 cut(s)	168, 850
AlwI	GGATC	7 cut(s)	97, 538, 625, 653, 704, 1019, 1067
AoxI	GGCC	3 cut(s)	117, 223, 835
ApoI	RAATTY	1 cut(s)	800
Asp700I	GAANNNNTTC	1 cut(s)	323
AspS9I	GGNCC	2 cut(s)	770, 836
AsuC2I	CCSGG	2 cut(s)	690, 726
AsuHPI	GGTGA	2 cut(s)	121, 1147
AsuII	TTCGAA	2 cut(s)	291, 1044
AvaII	GGWCC	1 cut(s)	770
BbsI	GAAGAC	2 cut(s)	244, 464
Bbv12I	GWGCWC	1 cut(s)	940
BccI	CCATC	1 cut(s)	574
BcgI	CGANNNNNNTGC	4 cut(s)	28, 62, 425, 459
BciT130I	CCWGG	1 cut(s)	550
BciVI	GTATCC	1 cut(s)	354
BclI	TGATCA	1 cut(s)	921
BcnI	CCSGG	2 cut(s)	690, 726
BcoDI	GTCTC	2 cut(s)	168, 850
BfaI	CTAG	1 cut(s)	24
BfrI	CTTAAG	1 cut(s)	32
BfuI	GTATCC	1 cut(s)	354
Bme1390I	CCNGG	3 cut(s)	550, 690, 726
Bme18I	GGWCC	1 cut(s)	770
BmeRI	GACNNNNNGTC	2 cut(s)	726, 768
BmgBI	CACGTC	1 cut(s)	697
BmgT120I	GGNCC	2 cut(s)	770, 836
BmiI	GGNNCC	3 cut(s)	676, 771, 1008
BmrFI	CCNGG	3 cut(s)	550, 690, 726
BmrI	ACTGGG	1 cut(s)	25
BmsI	GCATC	4 cut(s)	208, 832, 1093, 1136
BmuI	ACTGGG	1 cut(s)	25
BpiI	GAAGAC	2 cut(s)	244, 464
BpmI	CTGGAG	1 cut(s)	924
Bpu14I	TTCGAA	2 cut(s)	291, 1044
BpuEI	CTTGAG	1 cut(s)	779
BpuMI	CCSGG	2 cut(s)	690, 726
Bsa29I	ATCGAT	1 cut(s)	241
BsaI	GGTCTC	2 cut(s)	168, 850
BsaJI	CCNNGG	1 cut(s)	548
Bsc4I	CCNNNNNNNGG	3 cut(s)	115, 353, 866
Bse1I	ACTGG	2 cut(s)	20, 1140
BseBI	CCWGG	1 cut(s)	550
BseCI	ATCGAT	1 cut(s)	241
BseDI	CCNNGG	1 cut(s)	548
BseGI	GGATG	3 cut(s)	534, 585, 883
BseLI	CCNNNNNNNGG	3 cut(s)	115, 353, 866
BseMII	CTCAG	2 cut(s)	162, 246
BseNI	ACTGG	2 cut(s)	20, 1140
BseRI	GAGGAG	1 cut(s)	983
BseYI	CCCAGC	1 cut(s)	1117
BsgI	GTGCAG	1 cut(s)	495
BshFI	GGCC	3 cut(s)	119, 225, 837
BshVI	ATCGAT	1 cut(s)	241
BsiHKAI	GWGCWC	1 cut(s)	940
BsiSI	CCGG	2 cut(s)	690, 725
BslFI	GGGAC	1 cut(s)	976
BslI	CCNNNNNNNGG	3 cut(s)	115, 353, 866
BsmAI	GTCTC	2 cut(s)	168, 850
BsmFI	GGGAC	1 cut(s)	976
BsnI	GGCC	3 cut(s)	119, 225, 837
Bso31I	GGTCTC	2 cut(s)	168, 850
Bsp119I	TTCGAA	2 cut(s)	291, 1044
Bsp1286I	GDGCHC	1 cut(s)	940
Bsp1407I	TGTACA	1 cut(s)	504
BspANI	GGCC	3 cut(s)	119, 225, 837
BspCNI	CTCAG	2 cut(s)	161, 245
BspDI	ATCGAT	1 cut(s)	241
BspHI	TCATGA	1 cut(s)	361
BspLI	GGNNCC	3 cut(s)	676, 771, 1008
BspPI	GGATC	7 cut(s)	97, 538, 625, 653, 704, 1019, 1067
BspQI	GCTCTTC	1 cut(s)	1107
BspT104I	TTCGAA	2 cut(s)	291, 1044
BspTI	CTTAAG	1 cut(s)	32
BspTNI	GGTCTC	2 cut(s)	168, 850
BsrGI	TGTACA	1 cut(s)	504
BsrI	ACTGG	2 cut(s)	20, 1140
BssECI	CCNNGG	1 cut(s)	548
Bst2UI	CCWGG	1 cut(s)	550
Bst4CI	ACNGT	2 cut(s)	160, 892
Bst6I	CTCTTC	2 cut(s)	563, 1107
BstAFI	CTTAAG	1 cut(s)	32
BstAUI	TGTACA	1 cut(s)	504
BstBI	TTCGAA	2 cut(s)	291, 1044
BstC8I	GCNNGC	2 cut(s)	223, 434
BstDEI	CTNAG	3 cut(s)	142, 148, 232
BstEII	GGTNACC	1 cut(s)	1135
BstF5I	GGATG	3 cut(s)	534, 585, 883
BstMAI	GTCTC	2 cut(s)	168, 850
BstNI	CCWGG	1 cut(s)	550
BstNSI	RCATGY	1 cut(s)	503
BstPI	GGTNACC	1 cut(s)	1135
BstSCI	CCNGG	3 cut(s)	548, 688, 724
BstV2I	GAAGAC	2 cut(s)	244, 464
BstX2I	RGATCY	4 cut(s)	102, 617, 709, 1072
BstYI	RGATCY	4 cut(s)	102, 617, 709, 1072
Bsu15I	ATCGAT	1 cut(s)	241
BsuI	GTATCC	1 cut(s)	354
BsuRI	GGCC	3 cut(s)	119, 225, 837
BsuTUI	ATCGAT	1 cut(s)	241
BtrI	CACGTC	1 cut(s)	697
BtsCI	GGATG	3 cut(s)	534, 585, 883
BtsI	GCAGTG	1 cut(s)	507
BtsIMutI	CAGTG	2 cut(s)	507, 780
Cac8I	GCNNGC	2 cut(s)	223, 434
CciI	TCATGA	1 cut(s)	361
Cfr13I	GGNCC	2 cut(s)	770, 836
ClaI	ATCGAT	1 cut(s)	241
CseI	GACGC	1 cut(s)	115
Csp6I	GTAC	3 cut(s)	505, 886, 976
CviAII	CATG	7 cut(s)	328, 362, 500, 515, 666, 765, 830
CviQI	GTAC	3 cut(s)	505, 886, 976
DdeI	CTNAG	3 cut(s)	142, 148, 232
DraI	TTTAAA	1 cut(s)	466
DraIII	CACNNNGTG	1 cut(s)	904
DriI	GACNNNNNGTC	2 cut(s)	726, 768
Eam1104I	CTCTTC	2 cut(s)	563, 1107
Eam1105I	GACNNNNNGTC	2 cut(s)	726, 768
EarI	CTCTTC	2 cut(s)	563, 1107
Eco31I	GGTCTC	2 cut(s)	168, 850
Eco47I	GGWCC	1 cut(s)	770
Eco91I	GGTNACC	1 cut(s)	1135
EcoO109I	RGGNCCY	2 cut(s)	770, 836
EcoO65I	GGTNACC	1 cut(s)	1135
EcoRII	CCWGG	1 cut(s)	548
FaeI	CATG	7 cut(s)	331, 365, 503, 518, 669, 768, 833
FalI	AAGNNNNNCTT	2 cut(s)	460, 492
FaqI	GGGAC	1 cut(s)	976
FatI	CATG	7 cut(s)	327, 361, 499, 514, 665, 764, 829
FauNDI	CATATG	1 cut(s)	438
FbaI	TGATCA	1 cut(s)	921
FokI	GGATG	3 cut(s)	521, 592, 890
FspBI	CTAG	1 cut(s)	24
GsaI	CCCAGC	1 cut(s)	1121
GsuI	CTGGAG	1 cut(s)	924
HaeIII	GGCC	3 cut(s)	119, 225, 837
HapII	CCGG	2 cut(s)	690, 725
HgaI	GACGC	1 cut(s)	115
Hin1II	CATG	7 cut(s)	331, 365, 503, 518, 669, 768, 833
HincII	GTYRAC	2 cut(s)	271, 411
HindII	GTYRAC	2 cut(s)	271, 411
HinfI	GANTC	9 cut(s)	40, 152, 243, 365, 571, 596, 685, 721, 908
HpaII	CCGG	2 cut(s)	690, 725
HphI	GGTGA	2 cut(s)	121, 1147
Hpy166II	GTNNAC	6 cut(s)	271, 411, 497, 505, 507, 888
Hpy188I	TCNGA	5 cut(s)	151, 173, 235, 709, 824
Hpy8I	GTNNAC	6 cut(s)	271, 411, 497, 505, 507, 888
Hpy99I	CGWCG	5 cut(s)	167, 170, 173, 698, 896
HpyAV	CCTTC	9 cut(s)	188, 209, 218, 236, 394, 672, 723, 827, 875
HpyCH4III	ACNGT	2 cut(s)	160, 892
HpyCH4IV	ACGT	2 cut(s)	54, 696
HpyCH4V	TGCA	5 cut(s)	193, 378, 512, 780, 845
HpyF3I	CTNAG	3 cut(s)	142, 148, 232
HpySE526I	ACGT	2 cut(s)	54, 696
Hsp92II	CATG	7 cut(s)	331, 365, 503, 518, 669, 768, 833
Ksp22I	TGATCA	1 cut(s)	921
LguI	GCTCTTC	1 cut(s)	1107
LmnI	GCTCC	1 cut(s)	943
LweI	GCATC	4 cut(s)	208, 832, 1093, 1136
MaeI	CTAG	1 cut(s)	24
MaeII	ACGT	2 cut(s)	54, 696
MaeIII	GTNAC	3 cut(s)	127, 1096, 1135
MboII	GAAGA	8 cut(s)	238, 244, 464, 580, 638, 657, 1103, 1124
MfeI	CAATTG	2 cut(s)	44, 121
MflI	RGATCY	4 cut(s)	102, 617, 709, 1072
MhlI	GDGCHC	1 cut(s)	940
MlyI	GAGTC	4 cut(s)	34, 580, 715, 917
MmeI	TCCRAC	2 cut(s)	151, 702
MroXI	GAANNNNTTC	1 cut(s)	323
MseI	TTAA	3 cut(s)	33, 465, 738
MslI	CAYNNNNRTG	2 cut(s)	519, 539
MspCI	CTTAAG	1 cut(s)	32
MspI	CCGG	2 cut(s)	690, 725
MspR9I	CCNGG	3 cut(s)	550, 690, 726
MunI	CAATTG	2 cut(s)	44, 121
MvaI	CCWGG	1 cut(s)	550
NciI	CCSGG	2 cut(s)	690, 726
NdeI	CATATG	1 cut(s)	438
NlaIII	CATG	7 cut(s)	331, 365, 503, 518, 669, 768, 833
NlaIV	GGNNCC	3 cut(s)	676, 771, 1008
NmuCI	GTSAC	3 cut(s)	127, 1096, 1135
NspI	RCATGY	1 cut(s)	503
NspV	TTCGAA	2 cut(s)	291, 1044
PagI	TCATGA	1 cut(s)	361
PciI	ACATGT	1 cut(s)	499
PciSI	GCTCTTC	1 cut(s)	1107
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	5 cut(s)	152, 243, 365, 596, 685
PflFI	GACNNNGTC	1 cut(s)	861
PflMI	CCANNNNNTGG	1 cut(s)	866
PleI	GAGTC	4 cut(s)	34, 579, 715, 916
PpsI	GAGTC	4 cut(s)	34, 579, 715, 916
PpuMI	RGGWCCY	1 cut(s)	770
PscI	ACATGT	1 cut(s)	499
Psp5II	RGGWCCY	1 cut(s)	770
Psp6I	CCWGG	1 cut(s)	548
PspEI	GGTNACC	1 cut(s)	1135
PspFI	CCCAGC	1 cut(s)	1117
PspGI	CCWGG	1 cut(s)	548
PspN4I	GGNNCC	3 cut(s)	676, 771, 1008
PspPI	GGNCC	2 cut(s)	770, 836
PspPPI	RGGWCCY	1 cut(s)	770
PsuI	RGATCY	4 cut(s)	102, 617, 709, 1072
PsyI	GACNNNGTC	1 cut(s)	861
RsaI	GTAC	3 cut(s)	506, 887, 977
RsaNI	GTAC	3 cut(s)	505, 886, 976
RseI	CAYNNNNRTG	2 cut(s)	519, 539
SapI	GCTCTTC	1 cut(s)	1107
SaqAI	TTAA	3 cut(s)	33, 465, 738
Sau96I	GGNCC	2 cut(s)	770, 836
SchI	GAGTC	4 cut(s)	34, 580, 715, 917
ScrFI	CCNGG	3 cut(s)	550, 690, 726
SduI	GDGCHC	1 cut(s)	940
SfaNI	GCATC	4 cut(s)	208, 832, 1093, 1136
SfuI	TTCGAA	2 cut(s)	291, 1044
SinI	GGWCC	1 cut(s)	770
SmiMI	CAYNNNNRTG	2 cut(s)	519, 539
SmlI	CTYRAG	2 cut(s)	32, 794
SmoI	CTYRAG	2 cut(s)	32, 794
SspMI	CTAG	1 cut(s)	24
StyD4I	CCNGG	3 cut(s)	548, 688, 724
TaaI	ACNGT	2 cut(s)	160, 892
TaiI	ACGT	2 cut(s)	57, 699
TaqI	TCGA	6 cut(s)	12, 241, 291, 744, 894, 1044
TatI	WGTACW	1 cut(s)	504
TfiI	GAWTC	5 cut(s)	152, 243, 365, 596, 685
Tru1I	TTAA	3 cut(s)	33, 465, 738
Tru9I	TTAA	3 cut(s)	33, 465, 738
TscAI	CASTG	2 cut(s)	514, 787
TseFI	GTSAC	3 cut(s)	127, 1096, 1135
Tsp45I	GTSAC	3 cut(s)	127, 1096, 1135
TspDTI	ATGAA	8 cut(s)	316, 378, 581, 594, 654, 846, 894, 1125
TspGWI	ACGGA	1 cut(s)	203
TspRI	CASTG	2 cut(s)	514, 787
Tth111I	GACNNNGTC	1 cut(s)	861
Van91I	CCANNNNNTGG	1 cut(s)	866
Vha464I	CTTAAG	1 cut(s)	32
VpaK11BI	GGWCC	1 cut(s)	770
XapI	RAATTY	1 cut(s)	800
XbaI	TCTAGA	1 cut(s)	23
XceI	RCATGY	1 cut(s)	503
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.