Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002370

Physical Location & Seq

Genomic Coordinates Forward (+)

16301085 .. 16302361

Gene Structure 1277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G202500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ACACAACCAATCTTCAATTCATTGCCTTCCATAGCTTCTTACTTAGAATTTGAACACAACTCGTCATCACAGTCGCCTCAACTTCAAACCCCAATTGATTGGCCTCTTGATGGCAAGCTCACCCTCAACTGGGTCCAAAGCCTCATGTCCGTCTTCGACTGGGCATCTAGAAATCTTGAGCCGACCCAATTGCCAAACGTGTTTCTTGTTGAGGTTTTTGATAGCCTGGCCCTATTTAACTCCAAGATCCTCCACAAAGAGGCCAATTGCGTCACCATTAATAACTTAGCCTTTGAATCCACGGTCGTTGTCGTCGGAGACCTTCATGGGCAGTTGCATGACCTTTTTTTCCTTCTCCATGATGTTGGCTTTTCCTCAGAAAATCGATTCTTCGTCTTCAATGGCGATTATGTTGACAGAGGTGCTTGGGGTCTTGAAAGTTTCTTAATTTTGTTAGCTTGGAAAGTGCTCATGCCAAAGAGGGTGTATCTATTGCGAGGAAACCACGAATCAAAGTATTGCACTTCTGTTTATGGTTTTGAGAAGGAAGTGCTGACAAAGTACAATGATAGAGGCAAACACGTGTATTGTAAATGTCTTGGGTGCTTTGAAGGTCTTTTTCGCCACATGCCTGCTATCTCCAAGAAATCAAAGGGAAAGAAGAGTCGAAGAGCTTTCAATCATGAACCTATTCTTCATCCTCCATGGGAAGGTCCCAATGTGATTCCTGGTGATGTGCTGTGGTCGGATCCCTCAATATCTCCCGGCCTGTCTCCAAATATAGAGAGAGGCATTGGGCTGCTTTGGGGTCCTGATTGCACCGAGGATTTTCTCAAGAATTGTCAACTCAAATTGATTATTAGATCCCACGAAGGTCCTGATGCACGAGAAAATAGGCCAGGTCTTGGTGGAATGGATGAAGGGTACACCATCGATCACATTGTGGAGTCAGGAAAGCTCATCACTTTGTTTAGTGCTCCAGATTACCCACAATTTCAGAGCACAGAGGAGAGGTACAAAAATAAAGGGGCTTACATTATCTTGGAACCCCCTAATTTTGATGATTATGTATTTCATAGTTTCGAAGCAATTACTTCAAGGCCAAAGGCGGATCCCTTTTACAATTTTGAAGAAATGATTGATTCTGATGAAGAGTTGGACTTGGCATCAATGGTACAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

395

Amino Acids

44.84

Weight (kDa)

5.26

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63870 AT5G63870 AT5G63870
fragaria_vesca	FvH4_1g09700 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940 FvH4_1g09940
malus_domestica	MD02G1108000.v1.1 MD06G1225000.v1.1 MD15G1227500.v1.1
prunus_persica	Prupe.2G305700_v2.0.a1 Prupe.5G201300_v2.0.a1 Prupe.5G202500_v2.0.a1 Prupe.5G202600_v2.0.a1 Prupe.7G187800_v2.0.a1
pyrus_communis	pycom15g20250
rosa_chinensis	RchiOBHm_Chr1g0342291 RchiOBHm_Chr2g0096721 RchiOBHm_Chr4g0402221
rosa_laevigata	RLG00000016665 RLG00000035490
rosa_multiflora	Rmu_co8145630.1_g000001 Rmu_sc0004291.1_g000001 Rmu_sc0007075.1_g000017 Rmu_sc0007466.1_g000009 Rmu_sc0008602.1_g000006 Rmu_ssc0000215.1_g000062
rosa_roxburghii	Rroxscaffold_1G00022100 Rroxscaffold_2G00145380
rosa_rugosa	Rorug02G0060100 Rorug02G0060200 Rorug02G0060300 Rorug02G0222700 Rorug07G0349900
rosa_samantha	Rh2AG107400 Rh2BG109800 Rh2CG111600 Rh2DG111200 Rh4DG017000
rosa_wichuraiana	Rw2G008330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	905
AciI	CCGC	1 cut(s)	1109
AclWI	GGATC	6 cut(s)	241, 743, 756, 858, 1106, 1119
AcsI	RAATTY	1 cut(s)	47
AcvI	CACGTG	1 cut(s)	583
AdeI	CACNNNGTG	1 cut(s)	943
AfaI	GTAC	4 cut(s)	563, 926, 1016, 1176
AfiI	CCNNNNNNNGG	6 cut(s)	110, 129, 130, 259, 710, 905
AflIII	ACRYGT	3 cut(s)	198, 580, 582
AjnI	CCWGG	3 cut(s)	225, 727, 898
AjuI	GAANNNNNNNTTGG	1 cut(s)	33
AluBI	AGCT	5 cut(s)	35, 118, 458, 674, 958
AluI	AGCT	5 cut(s)	35, 118, 458, 674, 958
Alw21I	GWGCWC	3 cut(s)	471, 979, 1004
Alw26I	GTCTC	2 cut(s)	312, 777
AlwI	GGATC	6 cut(s)	241, 743, 756, 858, 1106, 1119
AoxI	GGCC	6 cut(s)	101, 228, 261, 766, 896, 1100
ApeKI	GCWGC	1 cut(s)	799
ApoI	RAATTY	1 cut(s)	47
AseI	ATTAAT	1 cut(s)	279
Asp700I	GAANNNNTTC	1 cut(s)	690
AspS9I	GGNCC	5 cut(s)	133, 229, 713, 809, 875
AsuC2I	CCSGG	1 cut(s)	765
AsuHPI	GGTGA	3 cut(s)	112, 265, 743
AsuII	TTCGAA	1 cut(s)	1083
AvaII	GGWCC	4 cut(s)	133, 713, 809, 875
BamHI	GGATCC	2 cut(s)	748, 1111
BauI	CACGAG	1 cut(s)	885
BbrPI	CACGTG	1 cut(s)	583
BbsI	GAAGAC	2 cut(s)	145, 388
Bbv12I	GWGCWC	3 cut(s)	471, 979, 1004
BbvI	GCAGC	1 cut(s)	786
BccI	CCATC	2 cut(s)	104, 938
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	3 cut(s)	227, 729, 900
BcnI	CCSGG	1 cut(s)	765
BcoDI	GTCTC	2 cut(s)	312, 777
BfaI	CTAG	1 cut(s)	168
BisI	GCNGC	1 cut(s)	800
BlsI	GCNGC	1 cut(s)	801
Bme1390I	CCNGG	4 cut(s)	227, 729, 765, 900
Bme18I	GGWCC	4 cut(s)	133, 713, 809, 875
BmgT120I	GGNCC	5 cut(s)	133, 229, 713, 809, 875
BmiI	GGNNCC	6 cut(s)	134, 715, 750, 810, 1047, 1113
BmrFI	CCNGG	4 cut(s)	227, 729, 765, 900
BmrI	ACTGGG	2 cut(s)	139, 169
BmsI	GCATC	3 cut(s)	173, 871, 1175
BmuI	ACTGGG	2 cut(s)	139, 169
BpiI	GAAGAC	2 cut(s)	145, 388
BpmI	CTGGAG	1 cut(s)	963
Bpu14I	TTCGAA	1 cut(s)	1083
BpuEI	CTTGAG	2 cut(s)	197, 818
BpuMI	CCSGG	1 cut(s)	765
Bsa29I	ATCGAT	2 cut(s)	385, 933
BsaAI	YACGTR	1 cut(s)	583
BsaI	GGTCTC	1 cut(s)	312
BsaJI	CCNNGG	3 cut(s)	300, 704, 822
Bsc4I	CCNNNNNNNGG	6 cut(s)	110, 129, 130, 259, 710, 905
Bse1I	ACTGG	2 cut(s)	134, 164
Bse3DI	GCAATG	1 cut(s)	20
BseBI	CCWGG	3 cut(s)	227, 729, 900
BseCI	ATCGAT	2 cut(s)	385, 933
BseDI	CCNNGG	3 cut(s)	300, 704, 822
BseGI	GGATG	2 cut(s)	697, 922
BseLI	CCNNNNNNNGG	6 cut(s)	110, 129, 130, 259, 710, 905
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	1 cut(s)	390
BseNI	ACTGG	2 cut(s)	134, 164
BseRI	GAGGAG	1 cut(s)	1022
BseXI	GCAGC	1 cut(s)	786
Bsh1285I	CGRYCG	1 cut(s)	306
BshFI	GGCC	6 cut(s)	103, 230, 263, 768, 898, 1102
BshVI	ATCGAT	2 cut(s)	385, 933
BsiEI	CGRYCG	1 cut(s)	306
BsiHKAI	GWGCWC	3 cut(s)	471, 979, 1004
BsiSI	CCGG	1 cut(s)	765
BslFI	GGGAC	1 cut(s)	699
BslI	CCNNNNNNNGG	6 cut(s)	110, 129, 130, 259, 710, 905
BsmAI	GTCTC	2 cut(s)	312, 777
BsmFI	GGGAC	1 cut(s)	699
BsnI	GGCC	6 cut(s)	103, 230, 263, 768, 898, 1102
Bso31I	GGTCTC	1 cut(s)	312
Bsp119I	TTCGAA	1 cut(s)	1083
Bsp1286I	GDGCHC	3 cut(s)	471, 979, 1004
Bsp143I	GATC	5 cut(s)	246, 748, 863, 934, 1111
Bsp19I	CCATGG	1 cut(s)	704
BspACI	CCGC	1 cut(s)	1109
BspANI	GGCC	6 cut(s)	103, 230, 263, 768, 898, 1102
BspCNI	CTCAG	1 cut(s)	389
BspDI	ATCGAT	2 cut(s)	385, 933
BspHI	TCATGA	1 cut(s)	682
BspLI	GGNNCC	6 cut(s)	134, 715, 750, 810, 1047, 1113
BspPI	GGATC	6 cut(s)	241, 743, 756, 858, 1106, 1119
BspQI	GCTCTTC	1 cut(s)	664
BspT104I	TTCGAA	1 cut(s)	1083
BspTNI	GGTCTC	1 cut(s)	312
BsrDI	GCAATG	1 cut(s)	20
BsrI	ACTGG	2 cut(s)	134, 164
BssECI	CCNNGG	3 cut(s)	300, 704, 822
BssMI	GATC	5 cut(s)	246, 748, 863, 934, 1111
BssSI	CACGAG	1 cut(s)	885
BssT1I	CCWWGG	1 cut(s)	704
Bst2BI	CACGAG	1 cut(s)	885
Bst2UI	CCWGG	3 cut(s)	227, 729, 900
Bst4CI	ACNGT	2 cut(s)	72, 304
Bst6I	CTCTTC	3 cut(s)	656, 664, 1146
BstBAI	YACGTR	1 cut(s)	583
BstBI	TTCGAA	1 cut(s)	1083
BstC8I	GCNNGC	2 cut(s)	116, 633
BstDEI	CTNAG	3 cut(s)	43, 286, 376
BstDSI	CCRYGG	2 cut(s)	300, 704
BstF5I	GGATG	2 cut(s)	697, 922
BstKTI	GATC	5 cut(s)	249, 751, 866, 937, 1114
BstMAI	GTCTC	2 cut(s)	312, 777
BstMBI	GATC	5 cut(s)	246, 748, 863, 934, 1111
BstMCI	CGRYCG	1 cut(s)	306
BstNI	CCWGG	3 cut(s)	227, 729, 900
BstNSI	RCATGY	1 cut(s)	631
BstSCI	CCNGG	4 cut(s)	225, 727, 763, 898
BstV1I	GCAGC	1 cut(s)	786
BstV2I	GAAGAC	2 cut(s)	145, 388
BstX2I	RGATCY	4 cut(s)	246, 748, 863, 1111
BstXI	CCANNNNNNTGG	2 cut(s)	99, 365
BstYI	RGATCY	4 cut(s)	246, 748, 863, 1111
Bsu15I	ATCGAT	2 cut(s)	385, 933
BsuRI	GGCC	6 cut(s)	103, 230, 263, 768, 898, 1102
BsuTUI	ATCGAT	2 cut(s)	385, 933
BtgI	CCRYGG	2 cut(s)	300, 704
BtsCI	GGATG	2 cut(s)	697, 922
Cac8I	GCNNGC	2 cut(s)	116, 633
CciI	TCATGA	1 cut(s)	682
Cfr13I	GGNCC	5 cut(s)	133, 229, 713, 809, 875
ClaI	ATCGAT	2 cut(s)	385, 933
CseI	GACGC	1 cut(s)	259
Csp6I	GTAC	4 cut(s)	562, 925, 1015, 1175
CspCI	CAANNNNNGTGG	2 cut(s)	289, 324
CviAII	CATG	8 cut(s)	145, 326, 338, 359, 472, 628, 683, 705
CviQI	GTAC	4 cut(s)	562, 925, 1015, 1175
DdeI	CTNAG	3 cut(s)	43, 286, 376
DpnI	GATC	5 cut(s)	248, 750, 865, 936, 1113
DpnII	GATC	5 cut(s)	246, 748, 863, 934, 1111
DraIII	CACNNNGTG	1 cut(s)	943
Eam1104I	CTCTTC	3 cut(s)	656, 664, 1146
EarI	CTCTTC	3 cut(s)	656, 664, 1146
EciI	GGCGGA	1 cut(s)	1124
Eco130I	CCWWGG	1 cut(s)	704
Eco31I	GGTCTC	1 cut(s)	312
Eco47I	GGWCC	4 cut(s)	133, 713, 809, 875
Eco72I	CACGTG	1 cut(s)	583
EcoO109I	RGGNCCY	3 cut(s)	713, 809, 875
EcoRII	CCWGG	3 cut(s)	225, 727, 898
EcoT14I	CCWWGG	1 cut(s)	704
ErhI	CCWWGG	1 cut(s)	704
FaeI	CATG	8 cut(s)	148, 329, 341, 362, 475, 631, 686, 708
FaqI	GGGAC	1 cut(s)	699
FatI	CATG	8 cut(s)	144, 325, 337, 358, 471, 627, 682, 704
Fnu4HI	GCNGC	1 cut(s)	800
FokI	GGATG	2 cut(s)	684, 929
Fsp4HI	GCNGC	1 cut(s)	800
FspBI	CTAG	1 cut(s)	168
GluI	GCNGC	1 cut(s)	800
GsuI	CTGGAG	1 cut(s)	963
HaeIII	GGCC	6 cut(s)	103, 230, 263, 768, 898, 1102
HapII	CCGG	1 cut(s)	765
HgaI	GACGC	1 cut(s)	259
Hin1II	CATG	8 cut(s)	148, 329, 341, 362, 475, 631, 686, 708
HincII	GTYRAC	2 cut(s)	415, 845
HindII	GTYRAC	2 cut(s)	415, 845
HinfI	GANTC	7 cut(s)	296, 387, 509, 664, 724, 947, 1142
HpaII	CCGG	1 cut(s)	765
HphI	GGTGA	3 cut(s)	112, 265, 743
Hpy166II	GTNNAC	3 cut(s)	415, 845, 927
Hpy188I	TCNGA	5 cut(s)	317, 379, 748, 999, 1147
Hpy8I	GTNNAC	3 cut(s)	415, 845, 927
Hpy99I	CGWCG	1 cut(s)	317
HpyAV	CCTTC	8 cut(s)	36, 332, 362, 538, 605, 704, 866, 914
HpyCH4III	ACNGT	2 cut(s)	72, 304
HpyCH4IV	ACGT	2 cut(s)	198, 582
HpyCH4V	TGCA	4 cut(s)	337, 522, 819, 884
HpyF3I	CTNAG	3 cut(s)	43, 286, 376
HpySE526I	ACGT	2 cut(s)	198, 582
Hsp92II	CATG	8 cut(s)	148, 329, 341, 362, 475, 631, 686, 708
Kzo9I	GATC	5 cut(s)	246, 748, 863, 934, 1111
LguI	GCTCTTC	1 cut(s)	664
LmnI	GCTCC	1 cut(s)	982
Lsp1109I	GCAGC	1 cut(s)	786
LweI	GCATC	3 cut(s)	173, 871, 1175
MaeI	CTAG	1 cut(s)	168
MaeII	ACGT	2 cut(s)	198, 582
MaeIII	GTNAC	1 cut(s)	271
MalI	GATC	5 cut(s)	248, 750, 865, 936, 1113
MboI	GATC	5 cut(s)	246, 748, 863, 934, 1111
MboII	GAAGA	9 cut(s)	4, 145, 382, 388, 673, 681, 686, 1142, 1163
MfeI	CAATTG	3 cut(s)	93, 188, 265
MflI	RGATCY	4 cut(s)	246, 748, 863, 1111
MhlI	GDGCHC	3 cut(s)	471, 979, 1004
MlyI	GAGTC	2 cut(s)	673, 956
MmeI	TCCRAC	3 cut(s)	295, 726, 1137
MroXI	GAANNNNTTC	1 cut(s)	690
MseI	TTAA	3 cut(s)	237, 279, 446
MspI	CCGG	1 cut(s)	765
MspR9I	CCNGG	4 cut(s)	227, 729, 765, 900
MunI	CAATTG	3 cut(s)	93, 188, 265
MvaI	CCWGG	3 cut(s)	227, 729, 900
NciI	CCSGG	1 cut(s)	765
NcoI	CCATGG	1 cut(s)	704
NdeII	GATC	5 cut(s)	246, 748, 863, 934, 1111
NlaIII	CATG	8 cut(s)	148, 329, 341, 362, 475, 631, 686, 708
NlaIV	GGNNCC	6 cut(s)	134, 715, 750, 810, 1047, 1113
NmuCI	GTSAC	1 cut(s)	271
NspI	RCATGY	1 cut(s)	631
NspV	TTCGAA	1 cut(s)	1083
PagI	TCATGA	1 cut(s)	682
PciSI	GCTCTTC	1 cut(s)	664
PdmI	GAANNNNTTC	1 cut(s)	690
PfeI	GAWTC	5 cut(s)	296, 387, 509, 724, 1142
PflMI	CCANNNNNTGG	1 cut(s)	905
PkrI	GCNGC	1 cut(s)	801
PleI	GAGTC	2 cut(s)	672, 955
PmaCI	CACGTG	1 cut(s)	583
PmlI	CACGTG	1 cut(s)	583
PpsI	GAGTC	2 cut(s)	672, 955
Ppu21I	YACGTR	1 cut(s)	583
PpuMI	RGGWCCY	3 cut(s)	713, 809, 875
PshBI	ATTAAT	1 cut(s)	279
Psp5II	RGGWCCY	3 cut(s)	713, 809, 875
Psp6I	CCWGG	3 cut(s)	225, 727, 898
PspCI	CACGTG	1 cut(s)	583
PspGI	CCWGG	3 cut(s)	225, 727, 898
PspN4I	GGNNCC	6 cut(s)	134, 715, 750, 810, 1047, 1113
PspPI	GGNCC	5 cut(s)	133, 229, 713, 809, 875
PspPPI	RGGWCCY	3 cut(s)	713, 809, 875
PsuI	RGATCY	4 cut(s)	246, 748, 863, 1111
RsaI	GTAC	4 cut(s)	563, 926, 1016, 1176
RsaNI	GTAC	4 cut(s)	562, 925, 1015, 1175
SapI	GCTCTTC	1 cut(s)	664
SaqAI	TTAA	3 cut(s)	237, 279, 446
SatI	GCNGC	1 cut(s)	800
Sau3AI	GATC	5 cut(s)	246, 748, 863, 934, 1111
Sau96I	GGNCC	5 cut(s)	133, 229, 713, 809, 875
SchI	GAGTC	2 cut(s)	673, 956
ScrFI	CCNGG	4 cut(s)	227, 729, 765, 900
SduI	GDGCHC	3 cut(s)	471, 979, 1004
SfaNI	GCATC	3 cut(s)	173, 871, 1175
SfuI	TTCGAA	1 cut(s)	1083
SinI	GGWCC	4 cut(s)	133, 713, 809, 875
SmlI	CTYRAG	2 cut(s)	176, 833
SmoI	CTYRAG	2 cut(s)	176, 833
SsiI	CCGC	1 cut(s)	1109
SspMI	CTAG	1 cut(s)	168
StyD4I	CCNGG	4 cut(s)	225, 727, 763, 898
StyI	CCWWGG	1 cut(s)	704
TaaI	ACNGT	2 cut(s)	72, 304
TaiI	ACGT	2 cut(s)	201, 585
TaqI	TCGA	5 cut(s)	156, 385, 667, 933, 1083
TatI	WGTACW	1 cut(s)	561
TfiI	GAWTC	5 cut(s)	296, 387, 509, 724, 1142
Tru1I	TTAA	3 cut(s)	237, 279, 446
Tru9I	TTAA	3 cut(s)	237, 279, 446
TseFI	GTSAC	1 cut(s)	271
TseI	GCWGC	1 cut(s)	799
Tsp45I	GTSAC	1 cut(s)	271
TspDTI	ATGAA	7 cut(s)	9, 314, 686, 699, 933, 1064, 1164
TspGWI	ACGGA	1 cut(s)	139
Van91I	CCANNNNNTGG	1 cut(s)	905
VpaK11BI	GGWCC	4 cut(s)	133, 713, 809, 875
VspI	ATTAAT	1 cut(s)	279
XapI	RAATTY	1 cut(s)	47
XbaI	TCTAGA	1 cut(s)	167
XceI	RCATGY	1 cut(s)	631
XmnI	GAANNNNTTC	1 cut(s)	690
XspI	CTAG	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.