Rorug02G0060300

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
4651328 .. 4651909
582 bp
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UTR
Exon/CDS
Intron
Rorug02G0060300.1

Sequence Viewer

Length: 264 bp
ATGGCAAAAGTTTCGGGCGAGGTTGGGGACTTGGTGGCCGGGAAATGGGTTTCATGGGAGTGTGAGATTTGGGTTTGTTACGGATATGGTTGTTGCGAATTCCTTAATGTCTATGTATTTGTAAATGTGGGGGTTTTGGGGAATGTAGGAAGGAGTGGTAGTGTTGATTTGGGGAGACGGGTGTTTGAGCGCATGAAGCGTAGAAATGTATATGCTTGGACGATGATGGTCTATAGTTATGTGCAGAATGGAGCTAGCGTCTGA

Protein Analysis

87

Amino Acids

9.8

Weight (kDa)

8.41

Isoelectric Point (pI)

23.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 45
AluBI AGCT 1 cut(s) 254
AluI AGCT 1 cut(s) 254
Alw26I GTCTC 1 cut(s) 169
AoxI GGCC 1 cut(s) 36
ApoI RAATTY 1 cut(s) 98
AspLEI GCGC 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 40
AsuNHI GCTAGC 1 cut(s) 254
BccI CCATC 1 cut(s) 220
BcgI CGANNNNNNTGC 1 cut(s) 28
BcnI CCSGG 1 cut(s) 40
BcoDI GTCTC 1 cut(s) 169
BfaI CTAG 1 cut(s) 255
BfmI CTRYAG 1 cut(s) 232
Bme1390I CCNGG 1 cut(s) 40
BmrFI CCNGG 1 cut(s) 40
BmtI GCTAGC 1 cut(s) 258
BpuMI CCSGG 1 cut(s) 40
BsaXI ACNNNNNCTCC 3 cut(s) 145, 175, 243
Bsc4I CCNNNNNNNGG 1 cut(s) 45
BseLI CCNNNNNNNGG 1 cut(s) 45
BsgI GTGCAG 1 cut(s) 263
BshFI GGCC 1 cut(s) 38
BsiSI CCGG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 1 cut(s) 45
BsmAI GTCTC 1 cut(s) 169
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 41
BsnI GGCC 1 cut(s) 38
BspANI GGCC 1 cut(s) 38
BspOI GCTAGC 1 cut(s) 258
BstC8I GCNNGC 1 cut(s) 256
BstHHI GCGC 1 cut(s) 192
BstMAI GTCTC 1 cut(s) 169
BstMWI GCNNNNNNNGC 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 38
BstSFI CTRYAG 1 cut(s) 232
BsuRI GGCC 1 cut(s) 38
Cac8I GCNNGC 1 cut(s) 256
CfoI GCGC 1 cut(s) 192
CseI GACGC 1 cut(s) 247
CviAII CATG 2 cut(s) 54, 193
CviJI RGCY 2 cut(s) 38, 254
CviKI_1 RGCY 2 cut(s) 38, 254
EaeI YGGCCR 1 cut(s) 36
EcoRI GAATTC 1 cut(s) 98
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 2 cut(s) 57, 196
FaiI YATR 8 cut(s) 55, 87, 114, 194, 211, 213, 234, 240
FaqI GGGAC 1 cut(s) 41
FatI CATG 2 cut(s) 53, 192
FspBI CTAG 1 cut(s) 255
GlaI GCGC 1 cut(s) 191
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 39
HgaI GACGC 1 cut(s) 247
HhaI GCGC 1 cut(s) 192
Hin1II CATG 2 cut(s) 57, 196
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HpaII CCGG 1 cut(s) 39
Hpy188I TCNGA 1 cut(s) 263
HpyAV CCTTC 1 cut(s) 144
HpyCH4V TGCA 1 cut(s) 244
HpyF10VI GCNNNNNNNGC 1 cut(s) 196
Hsp92II CATG 2 cut(s) 57, 196
HspAI GCGC 1 cut(s) 190
LmnI GCTCC 1 cut(s) 251
LpnPI CCDG 1 cut(s) 52
MaeI CTAG 1 cut(s) 255
MaeIII GTNAC 1 cut(s) 77
MluCI AATT 1 cut(s) 98
MnlI CCTC 1 cut(s) 13
MseI TTAA 1 cut(s) 105
MslI CAYNNNNRTG 1 cut(s) 58
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 1 cut(s) 40
MwoI GCNNNNNNNGC 1 cut(s) 196
NciI CCSGG 1 cut(s) 40
NheI GCTAGC 1 cut(s) 254
NlaIII CATG 2 cut(s) 57, 196
RseI CAYNNNNRTG 1 cut(s) 58
SaqAI TTAA 1 cut(s) 105
ScrFI CCNGG 1 cut(s) 40
SetI ASST 2 cut(s) 24, 256
SfcI CTRYAG 1 cut(s) 232
SgeI CNNG 9 cut(s) 27, 31, 43, 51, 52, 66, 191, 205, 228
SmiMI CAYNNNNRTG 1 cut(s) 58
Sse9I AATT 1 cut(s) 98
SspMI CTAG 1 cut(s) 255
StyD4I CCNGG 1 cut(s) 38
TasI AATT 1 cut(s) 98
Tru1I TTAA 1 cut(s) 105
Tru9I TTAA 1 cut(s) 105
TspDTI ATGAA 2 cut(s) 42, 209
TspGWI ACGGA 1 cut(s) 96
XapI RAATTY 1 cut(s) 98
XspI CTAG 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.