FvH4_1g09700

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
5205059 .. 5207557
2499 bp
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UTR
Exon/CDS
Intron
FvH4_1g09700.t1

Sequence Viewer

Length: 1629 bp
ATGAGGGAAGAAGAGGGCGAGGGAGAGGATGGAGAGGAGGGCCATAGTGAGGACACTGATGAAGACAGAGAAGAAGAAGAAGAACCCACAATGAAGACAAGAAAAAGGAAGCAAATAGGAGGAAAAAATAATGAAGAAGAAGAAGATCATCCACCAGAGCAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGATCAGCCACCAGAGCAAGTAGTAGAAGAAGATCATCCACCAGAGCAAGTAGTAGAAGAAGATCAGCCACCGGAGCAAGTAGAAGAAGAAGAAGAAGAAGATCAGCCACCGGAGCAAGTAGTAGAAGAAGATCAGCCACCGGAGCAAGTAGAAGAAGATCAGCCACCGGAGCAAGTAGAAGAAGATCAGCCACCGGAGCAAGTTGCAGCAATCTTGGGCTCACCGCAACAAAGCCCAATCGTATGGCCCCTGGACGGGAAGCTGAGCGTGGAGTGGGTCCAGAACCTCATGGCCATGTTTGATTGGTCATCAAGAAATCTAACTCCAGCCGAATTCTCAAAGGTACTTCCAGTCCAGGTCTTCGATAGCTTGGTTGTTACCGCCTCCAAGATCCTCCACAAAGAACCCAACTGTGTCAAGATCGATAACCGCTGCCCGGACTCCACCATTGTGTTTGTCGGAGACGTCCATGGCCAGCTGCATGATGTTCTTTTTCTCTTAAAAGATTCTGGGTACCCGTTGGAGAACAGAATCTTCGTCTTCAATGGAGACTATGTTGACAGAGGAGCTTGGGGTCTGGAGACTCTCTTGATTTTGTTGGCCTGGAAAGTTTTGATGCCGAAGAGTGTTTATCTTTTGAGAGGTAACCAAGAATCCAAATACTGTACTTCTGTTTTTGGATTCGAGAAGGAAGTGTTGGTTAAGTATAAAGATAATGGAAAACAAGTGTATAGAAAATGCTTAGATTGCTTGAAGGAGCTTCCACTTGCATCCATTATAAATGAGCAAGTGTATACTGCTCATGGAGGGCTGTTCCGGAAACCTCGGAAACCTGCTAAGAGAGCAAAGGGGAAGAAGAAACAGAAGATTGTTTCGAATTCGGAGACGAGTTCTTTGGTTCTGGGGTCTTTGGATGAGTTGTCTAAGGCTGGAAGATCGGTTCTTGATCCTCCCTTGGAAGGTTCGAACTTGATTCCGGGTGATGTGCTGTGGTCGGATCCTTCAATGAAACCTGGCCTTTCTCTGAATGAGGATAGAGGTATTGGTATGTTCTGGGGTCCTGATTGCACTGAGGACTTCCTTAAGAAGTTTCAGCTCAAGTTGATTATCAGATCGCATGAAGGCCCTGATGCATGTGATAAGAGGCCAGGTCTTGAAGGCATGGATCAAGGTTACACCATTGATCATGTTGTGGAGTCAGGGAAGCTTATTACCTTATTTAGTGCTCCTGATTACCCACAATTTCAGGTTACCCAGAAGAGGTATAAAAAAAACAAAGGGGCTTACATTGTTCTGGAACCCCCTAATTTTGATGATCCTGTATTTCATAGTTTTGAAGCAGTAAGTCCAAGACCACAGGTAGAAGCATATTATGATTATATAGAAGCAATTGATTCCGATGAGGAGTTGGACATGGATAAAATGACAAGCAGCTCGTGA

Protein Analysis

543

Amino Acids

61.6

Weight (kDa)

4.47

Isoelectric Point (pI)

59.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 212 - 437 4.4e-26 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 968
AatII GACGTC 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 1030
Acc65I GGTACC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 702
AccI GTMKAC 1 cut(s) 983
AccIII TCCGGA 1 cut(s) 1005
AciI CCGC 3 cut(s) 413, 570, 619
AclWI GGATC 6 cut(s) 574, 1130, 1181, 1194, 1362, 1499
AcoI YGGCCR 2 cut(s) 480, 661
AcsI RAATTY 2 cut(s) 521, 1066
AcyI GRCGYC 1 cut(s) 654
AfaI GTAC 3 cut(s) 534, 704, 856
AfiI CCNNNNNNNGG 6 cut(s) 49, 443, 444, 625, 1148, 1449
AflII CTTAAG 1 cut(s) 1271
AgsI TTSAA 5 cut(s) 733, 943, 1194, 1346, 1526
AjnI CCWGG 5 cut(s) 438, 543, 791, 1201, 1336
AjuI GAANNNNNNNTTGG 2 cut(s) 869, 901
AleI CACNNNNGTG 1 cut(s) 638
AloI GAACNNNNNNTCC 2 cut(s) 1113, 1145
AluBI AGCT 8 cut(s) 451, 558, 667, 758, 949, 1285, 1396, 1623
AluI AGCT 8 cut(s) 451, 558, 667, 758, 949, 1285, 1396, 1623
Alw21I GWGCWC 1 cut(s) 1417
Alw26I GTCTC 4 cut(s) 645, 732, 764, 1067
AlwI GGATC 6 cut(s) 574, 1130, 1181, 1194, 1362, 1499
Aor13HI TCCGGA 1 cut(s) 1005
AoxI GGCC 8 cut(s) 40, 434, 480, 661, 789, 1204, 1312, 1334
ApeKI GCWGC 4 cut(s) 395, 621, 667, 1620
ApoI RAATTY 2 cut(s) 521, 1066
ArsI GACNNNNNNTTYG 2 cut(s) 1066, 1098
Asp718I GGTACC 1 cut(s) 702
AspS9I GGNCC 5 cut(s) 40, 435, 466, 1247, 1313
AsuC2I CCSGG 2 cut(s) 626, 1167
AsuHPI GGTGA 2 cut(s) 402, 1181
AsuII TTCGAA 2 cut(s) 1064, 1154
AvaII GGWCC 2 cut(s) 466, 1247
BalI TGGCCA 2 cut(s) 482, 663
BamHI GGATCC 1 cut(s) 1186
BanI GGYRCC 1 cut(s) 702
BanII GRGCYC 1 cut(s) 410
BauI CACGAG 1 cut(s) 1624
BbsI GAAGAC 4 cut(s) 69, 101, 541, 721
Bbv12I GWGCWC 1 cut(s) 1417
BbvI GCAGC 3 cut(s) 407, 608, 654
BccI CCATC 1 cut(s) 23
BciT130I CCWGG 5 cut(s) 440, 545, 793, 1203, 1338
BclI TGATCA 1 cut(s) 1372
BcnI CCSGG 2 cut(s) 626, 1167
BcoDI GTCTC 4 cut(s) 645, 732, 764, 1067
BfrI CTTAAG 1 cut(s) 1271
BfuAI ACCTGC 1 cut(s) 1030
BisI GCNGC 4 cut(s) 396, 622, 668, 1621
BlpI GCTNAGC 1 cut(s) 452
BlsI GCNGC 4 cut(s) 397, 623, 669, 1622
Bme1390I CCNGG 7 cut(s) 440, 545, 626, 793, 1167, 1203, 1338
Bme18I GGWCC 2 cut(s) 466, 1247
BmgT120I GGNCC 5 cut(s) 40, 435, 466, 1247, 1313
BmiI GGNNCC 6 cut(s) 437, 467, 704, 1188, 1248, 1488
BmrFI CCNGG 7 cut(s) 440, 545, 626, 793, 1167, 1203, 1338
BmsI GCATC 3 cut(s) 795, 968, 1309
BpiI GAAGAC 4 cut(s) 69, 101, 541, 721
BpmI CTGGAG 2 cut(s) 498, 788
Bpu1102I GCTNAGC 1 cut(s) 452
Bpu14I TTCGAA 2 cut(s) 1064, 1154
BpuEI CTTGAG 1 cut(s) 1271
BpuMI CCSGG 2 cut(s) 626, 1167
Bsa29I ATCGAT 1 cut(s) 612
BsaHI GRCGYC 1 cut(s) 654
BsaJI CCNNGG 4 cut(s) 438, 658, 1013, 1143
BsaWI WCCGGW 6 cut(s) 259, 298, 328, 355, 382, 1005
BsaXI ACNNNNNCTCC 2 cut(s) 729, 759
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 443, 444, 625, 1148, 1449
Bse1I ACTGG 1 cut(s) 539
BseAI TCCGGA 1 cut(s) 1005
BseBI CCWGG 5 cut(s) 440, 545, 793, 1203, 1338
BseCI ATCGAT 1 cut(s) 612
BseDI CCNNGG 4 cut(s) 438, 658, 1013, 1143
BseGI GGATG 5 cut(s) 34, 148, 223, 959, 1108
BseLI CCNNNNNNNGG 6 cut(s) 49, 443, 444, 625, 1148, 1449
BseMII CTCAG 2 cut(s) 443, 1251
BseNI ACTGG 1 cut(s) 539
BseRI GAGGAG 3 cut(s) 50, 768, 1607
BseXI GCAGC 3 cut(s) 407, 608, 654
BshFI GGCC 8 cut(s) 42, 436, 482, 663, 791, 1206, 1314, 1336
BshNI GGYRCC 1 cut(s) 702
BshVI ATCGAT 1 cut(s) 612
BsiHKAI GWGCWC 1 cut(s) 1417
BsiSI CCGG 8 cut(s) 260, 299, 329, 356, 383, 626, 1006, 1166
BslI CCNNNNNNNGG 6 cut(s) 49, 443, 444, 625, 1148, 1449
BsmAI GTCTC 4 cut(s) 645, 732, 764, 1067
BsmBI CGTCTC 2 cut(s) 645, 1067
BsnI GGCC 8 cut(s) 42, 436, 482, 663, 791, 1206, 1314, 1336
Bsp119I TTCGAA 2 cut(s) 1064, 1154
Bsp1286I GDGCHC 2 cut(s) 410, 1417
Bsp13I TCCGGA 1 cut(s) 1005
Bsp1720I GCTNAGC 1 cut(s) 452
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 3 cut(s) 413, 570, 619
BspANI GGCC 8 cut(s) 42, 436, 482, 663, 791, 1206, 1314, 1336
BspCNI CTCAG 2 cut(s) 444, 1252
BspDI ATCGAT 1 cut(s) 612
BspEI TCCGGA 1 cut(s) 1005
BspLI GGNNCC 6 cut(s) 437, 467, 704, 1188, 1248, 1488
BspMI ACCTGC 1 cut(s) 1030
BspPI GGATC 6 cut(s) 574, 1130, 1181, 1194, 1362, 1499
BspT104I TTCGAA 2 cut(s) 1064, 1154
BspT107I GGYRCC 1 cut(s) 702
BspTI CTTAAG 1 cut(s) 1271
BsrI ACTGG 1 cut(s) 539
BssECI CCNNGG 4 cut(s) 438, 658, 1013, 1143
BssNAI GTATAC 1 cut(s) 984
BssNI GRCGYC 1 cut(s) 654
BssSI CACGAG 1 cut(s) 1624
BssT1I CCWWGG 2 cut(s) 658, 1143
Bst1107I GTATAC 1 cut(s) 984
Bst2BI CACGAG 1 cut(s) 1624
Bst2UI CCWGG 5 cut(s) 440, 545, 793, 1203, 1338
Bst4CI ACNGT 2 cut(s) 602, 854
Bst6I CTCTTC 3 cut(s) 6, 806, 1442
BstACI GRCGYC 1 cut(s) 654
BstAFI CTTAAG 1 cut(s) 1271
BstBI TTCGAA 2 cut(s) 1064, 1154
BstC8I GCNNGC 1 cut(s) 665
BstDEI CTNAG 5 cut(s) 452, 931, 1026, 1113, 1260
BstDSI CCRYGG 1 cut(s) 658
BstEII GGTNACC 2 cut(s) 833, 1438
BstF5I GGATG 5 cut(s) 34, 148, 223, 959, 1108
BstMAI GTCTC 4 cut(s) 645, 732, 764, 1067
BstMWI GCNNNNNNNGC 8 cut(s) 202, 262, 301, 331, 358, 385, 936, 1031
BstNI CCWGG 5 cut(s) 440, 545, 793, 1203, 1338
BstNSI RCATGY 1 cut(s) 1326
BstPI GGTNACC 2 cut(s) 833, 1438
BstSCI CCNGG 7 cut(s) 438, 543, 624, 791, 1165, 1201, 1336
BstV1I GCAGC 3 cut(s) 407, 608, 654
BstV2I GAAGAC 4 cut(s) 69, 101, 541, 721
BstX2I RGATCY 2 cut(s) 579, 1186
BstXI CCANNNNNNTGG 1 cut(s) 432
BstYI RGATCY 2 cut(s) 579, 1186
BstZ17I GTATAC 1 cut(s) 984
Bsu15I ATCGAT 1 cut(s) 612
BsuRI GGCC 8 cut(s) 42, 436, 482, 663, 791, 1206, 1314, 1336
BsuTUI ATCGAT 1 cut(s) 612
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 5 cut(s) 34, 148, 223, 959, 1108
BtsIMutI CAGTG 2 cut(s) 54, 1257
BveI ACCTGC 1 cut(s) 1030
Cac8I GCNNGC 1 cut(s) 665
Cfr13I GGNCC 5 cut(s) 40, 435, 466, 1247, 1313
ClaI ATCGAT 1 cut(s) 612
Csp6I GTAC 3 cut(s) 533, 703, 855
CviQI GTAC 3 cut(s) 533, 703, 855
DdeI CTNAG 5 cut(s) 452, 931, 1026, 1113, 1260
EaeI YGGCCR 2 cut(s) 480, 661
Eam1104I CTCTTC 3 cut(s) 6, 806, 1442
EarI CTCTTC 3 cut(s) 6, 806, 1442
Eco130I CCWWGG 2 cut(s) 658, 1143
Eco24I GRGCYC 1 cut(s) 410
Eco47I GGWCC 2 cut(s) 466, 1247
Eco91I GGTNACC 2 cut(s) 833, 1438
EcoO109I RGGNCCY 2 cut(s) 1247, 1313
EcoO65I GGTNACC 2 cut(s) 833, 1438
EcoRI GAATTC 2 cut(s) 521, 1066
EcoRII CCWGG 5 cut(s) 438, 543, 791, 1201, 1336
EcoT14I CCWWGG 2 cut(s) 658, 1143
EcoT22I ATGCAT 1 cut(s) 1324
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 2 cut(s) 658, 1143
Esp3I CGTCTC 2 cut(s) 645, 1067
FbaI TGATCA 1 cut(s) 1372
FblI GTMKAC 1 cut(s) 983
Fnu4HI GCNGC 4 cut(s) 396, 622, 668, 1621
FokI GGATG 5 cut(s) 41, 135, 210, 946, 1115
FriOI GRGCYC 1 cut(s) 410
Fsp4HI GCNGC 4 cut(s) 396, 622, 668, 1621
GluI GCNGC 4 cut(s) 396, 622, 668, 1621
GsuI CTGGAG 2 cut(s) 498, 788
HaeIII GGCC 8 cut(s) 42, 436, 482, 663, 791, 1206, 1314, 1336
HapII CCGG 8 cut(s) 260, 299, 329, 356, 383, 626, 1006, 1166
Hin1I GRCGYC 1 cut(s) 654
HincII GTYRAC 1 cut(s) 748
HindII GTYRAC 1 cut(s) 748
HindIII AAGCTT 1 cut(s) 1394
HinfI GANTC 9 cut(s) 629, 695, 720, 772, 842, 870, 1162, 1385, 1583
HpaII CCGG 8 cut(s) 260, 299, 329, 356, 383, 626, 1006, 1166
HphI GGTGA 2 cut(s) 402, 1181
Hpy166II GTNNAC 2 cut(s) 748, 984
Hpy188I TCNGA 7 cut(s) 650, 1017, 1072, 1186, 1215, 1301, 1588
Hpy8I GTNNAC 2 cut(s) 748, 984
HpyAV CCTTC 6 cut(s) 871, 937, 1142, 1200, 1304, 1340
HpyCH4III ACNGT 2 cut(s) 602, 854
HpyCH4IV ACGT 1 cut(s) 654
HpyCH4V TGCA 5 cut(s) 395, 670, 959, 1257, 1322
HpyF10VI GCNNNNNNNGC 8 cut(s) 202, 262, 301, 331, 358, 385, 936, 1031
HpyF3I CTNAG 5 cut(s) 452, 931, 1026, 1113, 1260
HpySE526I ACGT 1 cut(s) 654
Hsp92I GRCGYC 1 cut(s) 654
Kpn2I TCCGGA 1 cut(s) 1005
KpnI GGTACC 1 cut(s) 706
Ksp22I TGATCA 1 cut(s) 1372
LmnI GCTCC 8 cut(s) 262, 301, 331, 358, 385, 755, 946, 1420
Lsp1109I GCAGC 3 cut(s) 407, 608, 654
LweI GCATC 3 cut(s) 795, 968, 1309
MaeII ACGT 1 cut(s) 654
MaeIII GTNAC 4 cut(s) 565, 833, 1361, 1438
MfeI CAATTG 1 cut(s) 1578
MflI RGATCY 2 cut(s) 579, 1186
MhlI GDGCHC 2 cut(s) 410, 1417
MlsI TGGCCA 2 cut(s) 482, 663
MluCI AATT 5 cut(s) 521, 1066, 1430, 1495, 1578
MluNI TGGCCA 2 cut(s) 482, 663
MlyI GAGTC 3 cut(s) 623, 766, 1394
MmeI TCCRAC 4 cut(s) 628, 690, 1164, 1578
Mox20I TGGCCA 2 cut(s) 482, 663
Mph1103I ATGCAT 1 cut(s) 1324
MroI TCCGGA 1 cut(s) 1005
MscI TGGCCA 2 cut(s) 482, 663
MseI TTAA 3 cut(s) 689, 891, 1272
MslI CAYNNNNRTG 2 cut(s) 482, 638
Msp20I TGGCCA 2 cut(s) 482, 663
MspA1I CMGCKG 2 cut(s) 621, 667
MspCI CTTAAG 1 cut(s) 1271
MspI CCGG 8 cut(s) 260, 299, 329, 356, 383, 626, 1006, 1166
MspR9I CCNGG 7 cut(s) 440, 545, 626, 793, 1167, 1203, 1338
MunI CAATTG 1 cut(s) 1578
MvaI CCWGG 5 cut(s) 440, 545, 793, 1203, 1338
MwoI GCNNNNNNNGC 8 cut(s) 202, 262, 301, 331, 358, 385, 936, 1031
NciI CCSGG 2 cut(s) 626, 1167
NcoI CCATGG 1 cut(s) 658
NlaIV GGNNCC 6 cut(s) 437, 467, 704, 1188, 1248, 1488
NsiI ATGCAT 1 cut(s) 1324
NspI RCATGY 1 cut(s) 1326
NspV TTCGAA 2 cut(s) 1064, 1154
OliI CACNNNNGTG 1 cut(s) 638
PfeI GAWTC 6 cut(s) 695, 720, 842, 870, 1162, 1583
PkrI GCNGC 4 cut(s) 397, 623, 669, 1622
PleI GAGTC 3 cut(s) 623, 766, 1393
PpsI GAGTC 3 cut(s) 623, 766, 1393
PpuMI RGGWCCY 1 cut(s) 1247
PsiI TTATAA 1 cut(s) 968
Psp5II RGGWCCY 1 cut(s) 1247
Psp6I CCWGG 5 cut(s) 438, 543, 791, 1201, 1336
PspEI GGTNACC 2 cut(s) 833, 1438
PspGI CCWGG 5 cut(s) 438, 543, 791, 1201, 1336
PspN4I GGNNCC 6 cut(s) 437, 467, 704, 1188, 1248, 1488
PspPI GGNCC 5 cut(s) 40, 435, 466, 1247, 1313
PspPPI RGGWCCY 1 cut(s) 1247
PsuI RGATCY 2 cut(s) 579, 1186
PvuII CAGCTG 1 cut(s) 667
RsaI GTAC 3 cut(s) 534, 704, 856
RsaNI GTAC 3 cut(s) 533, 703, 855
RseI CAYNNNNRTG 2 cut(s) 482, 638
SaqAI TTAA 3 cut(s) 689, 891, 1272
SatI GCNGC 4 cut(s) 396, 622, 668, 1621
Sau96I GGNCC 5 cut(s) 40, 435, 466, 1247, 1313
SchI GAGTC 3 cut(s) 623, 766, 1394
ScrFI CCNGG 7 cut(s) 440, 545, 626, 793, 1167, 1203, 1338
SduI GDGCHC 2 cut(s) 410, 1417
SfaNI GCATC 3 cut(s) 795, 968, 1309
SfuI TTCGAA 2 cut(s) 1064, 1154
SinI GGWCC 2 cut(s) 466, 1247
SmiMI CAYNNNNRTG 2 cut(s) 482, 638
SmlI CTYRAG 2 cut(s) 1271, 1286
SmoI CTYRAG 2 cut(s) 1271, 1286
Sse9I AATT 5 cut(s) 521, 1066, 1430, 1495, 1578
SsiI CCGC 3 cut(s) 413, 570, 619
StyD4I CCNGG 7 cut(s) 438, 543, 624, 791, 1165, 1201, 1336
StyI CCWWGG 2 cut(s) 658, 1143
TaaI ACNGT 2 cut(s) 602, 854
TaiI ACGT 1 cut(s) 657
TaqI TCGA 5 cut(s) 552, 612, 873, 1064, 1154
TasI AATT 5 cut(s) 521, 1066, 1430, 1495, 1578
TatI WGTACW 1 cut(s) 854
TfiI GAWTC 6 cut(s) 695, 720, 842, 870, 1162, 1583
Tru1I TTAA 3 cut(s) 689, 891, 1272
Tru9I TTAA 3 cut(s) 689, 891, 1272
TscAI CASTG 2 cut(s) 61, 1264
TseI GCWGC 4 cut(s) 395, 621, 667, 1620
TspDTI ATGAA 6 cut(s) 75, 107, 147, 1211, 1323, 1505
TspRI CASTG 2 cut(s) 61, 1264
Vha464I CTTAAG 1 cut(s) 1271
VpaK11BI GGWCC 2 cut(s) 466, 1247
XapI RAATTY 2 cut(s) 521, 1066
XceI RCATGY 1 cut(s) 1326
XmiI GTMKAC 1 cut(s) 983
ZraI GACGTC 1 cut(s) 655
Zsp2I ATGCAT 1 cut(s) 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.