FvH4_1g09940

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
5397604 .. 5401089
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g09940.t5

Sequence Viewer

Length: 1359 bp
ATGTCATGCAACTGTGATACAGAAATCCCACCTCTTCCTCCTCAATCTGAATCTCAACCATCCCAAGATCAACAACAATCTTCATCTCCAGAACCACCGATCTTGGCCACATCTCCGCCGCCGGAGCTAGAATTCCCAATCGAATGGCCCCCCGAAGGGAACCTCAGCCTGGAGTGGGTCCAGAATCTCATGTCCGTCTTCGACTGGTCTTCAAGAAATCTAACCCCGACCCAATTCCAAGAGGTTCTTCCCGTCAAGGTTTTCGATACCTTGGTTCTTACAGCCTCCAAGATCCTCCACAAAGAACCCAACTGCGTCATGATCGACGACTGCAGCCCTGACTCCACCGTCGTCGTCATCGGCGACGTCCACGGCCAGCTGCACGACGTTCTTTTTCTGTTAAAAGATGCCGGGTACCCGTCGGAGAATAGAATCTTCGTCTTCAATGGAGACTATGTTGACAGAGGAGCTTGGGGTCTTGAGACTTTCTTGGTTTTGCTGGCGTGGAAGGTTCTGATGCCTACGAGGGTGTATCTTCTGAGAGGTAATCATGAATCCAAGTACTGTACTTCTGTTTATGGATTCGAGAATGAAGTGTTGGTTAAGTATAGAGATGAGCATGGTAAAGATAGAGTAGGGAAACATGTGTATAGGAAATGCTTGGGTTGCTTTGAAGGGCTTCCTCTTGCGTCTATTATAAATGGGAGTGTTTATACTGCTCATGGAGGGCTGTTCCGCAGCATTGCGGTGACGCCTGTTAAGAGGCCAAAGGGGAAGAAGAATAGAAAGATAGTTATGAATTCGGAGACGAGTTCTTTGGTTTTGGGGTCTTTGGAGGAGTTGTCTAAGGCTAGAAGATCGGTTCTTGATCCTCCTTGGGAAGGTTTGAACTTGATTCCGGGGGACGTGCTGTGGTCGGATCCTTCGATGAAGCCTGGCCTTGCTCCGAATAAAGTTAGAGGCATTGGTCTCATTTGGGGACCTGATTGCACTGAGGACTTTCTTAAGAAGTTTCAGCTCAAGTTGATTATCAGATCGCATGAAGGCCCTGATGCGCGTGAAAAGAGGCCAGGTCTTGGAGGCATGGATCAAGGGTACACCATTGATCATGTCGTGGAGTCAGGGAAGCTCATTACTTTATTTAGTGCTCCAGATTACCCACAATTTCAGGGTACCGAGGAGAGGCATAGAAATAAAGGGGCTTACATTGTTCTGGAACCCCCTAATTTTGATCATCCTGTATTTCATAGTTTTGAAGCAATTGCTCCAAGACCACAGGTAAAAGCATACTATGATTATGAAGAAGCAATTGATTCTGATGAGGAGTTGGACATGGCATCAATGGCAACCAGCCCCTGA

Protein Analysis

453

Amino Acids

50.61

Weight (kDa)

5.27

Isoelectric Point (pI)

48.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 116 - 342 7.2e-28 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 698
AasI GACNNNNNNGTC 1 cut(s) 347
AatII GACGTC 1 cut(s) 369
Acc65I GGTACC 2 cut(s) 414, 1172
AccB1I GGYRCC 2 cut(s) 414, 1172
AccB7I CCANNNNNTGG 1 cut(s) 1076
AccII CGCG 1 cut(s) 1057
AciI CCGC 4 cut(s) 116, 119, 736, 746
AclWI GGATC 5 cut(s) 286, 863, 914, 927, 1095
AcoI YGGCCR 2 cut(s) 105, 373
AcsI RAATTY 2 cut(s) 131, 799
AcyI GRCGYC 2 cut(s) 366, 752
AfaI GTAC 5 cut(s) 416, 563, 568, 1097, 1174
AfiI CCNNNNNNNGG 7 cut(s) 155, 156, 169, 175, 881, 1076, 1182
AflII CTTAAG 1 cut(s) 1004
AflIII ACRYGT 1 cut(s) 643
AgsI TTSAA 5 cut(s) 213, 445, 674, 889, 1256
AjiI CACGTC 1 cut(s) 907
AjnI CCWGG 3 cut(s) 168, 934, 1069
AjuI GAANNNNNNNTTGG 4 cut(s) 231, 263, 581, 613
AluBI AGCT 5 cut(s) 127, 379, 470, 1018, 1129
AluI AGCT 5 cut(s) 127, 379, 470, 1018, 1129
Alw21I GWGCWC 1 cut(s) 1150
Alw26I GTCTC 4 cut(s) 444, 476, 800, 974
AlwI GGATC 5 cut(s) 286, 863, 914, 927, 1095
AlwNI CAGNNNCTG 1 cut(s) 1356
AoxI GGCC 7 cut(s) 105, 146, 373, 764, 937, 1045, 1067
ApeKI GCWGC 3 cut(s) 333, 379, 738
ApoI RAATTY 2 cut(s) 131, 799
ArsI GACNNNNNNTTYG 2 cut(s) 799, 831
Asp700I GAANNNNTTC 1 cut(s) 678
Asp718I GGTACC 2 cut(s) 414, 1172
AspLEI GCGC 1 cut(s) 1057
AspS9I GGNCC 4 cut(s) 147, 178, 980, 1046
AsuC2I CCSGG 2 cut(s) 412, 900
AsuHPI GGTGA 1 cut(s) 760
AvaII GGWCC 2 cut(s) 178, 980
BaeI ACNNNNGTAYC 2 cut(s) 258, 291
BalI TGGCCA 1 cut(s) 107
BamHI GGATCC 1 cut(s) 919
BanI GGYRCC 2 cut(s) 414, 1172
BbsI GAAGAC 3 cut(s) 190, 201, 433
Bbv12I GWGCWC 1 cut(s) 1150
BbvCI CCTCAGC 1 cut(s) 164
BbvI GCAGC 3 cut(s) 345, 366, 750
BccI CCATC 1 cut(s) 67
BceAI ACGGC 1 cut(s) 388
BciT130I CCWGG 3 cut(s) 170, 936, 1071
BclI TGATCA 2 cut(s) 1105, 1231
BcnI CCSGG 2 cut(s) 412, 900
BcoDI GTCTC 4 cut(s) 444, 476, 800, 974
BfaI CTAG 2 cut(s) 128, 852
BfmI CTRYAG 1 cut(s) 331
BfrI CTTAAG 1 cut(s) 1004
BisI GCNGC 4 cut(s) 119, 334, 380, 739
BlsI GCNGC 4 cut(s) 120, 335, 381, 740
BmcAI AGTACT 1 cut(s) 563
Bme1390I CCNGG 5 cut(s) 170, 412, 900, 936, 1071
Bme18I GGWCC 2 cut(s) 178, 980
BmgBI CACGTC 1 cut(s) 907
BmgT120I GGNCC 4 cut(s) 147, 178, 980, 1046
BmiI GGNNCC 8 cut(s) 149, 161, 179, 416, 921, 981, 1174, 1218
BmrFI CCNGG 5 cut(s) 170, 412, 900, 936, 1071
BmsI GCATC 4 cut(s) 397, 507, 1042, 1346
BpiI GAAGAC 3 cut(s) 190, 201, 433
BpmI CTGGAG 3 cut(s) 72, 191, 1134
Bpu10I CCTNAGC 1 cut(s) 164
BpuEI CTTGAG 2 cut(s) 500, 1004
BpuMI CCSGG 2 cut(s) 412, 900
BsaHI GRCGYC 2 cut(s) 366, 752
BsaI GGTCTC 1 cut(s) 974
BsaJI CCNNGG 5 cut(s) 270, 370, 875, 899, 1176
BsaXI ACNNNNNCTCC 4 cut(s) 441, 471, 827, 857
Bsc4I CCNNNNNNNGG 7 cut(s) 155, 156, 169, 175, 881, 1076, 1182
Bse1I ACTGG 1 cut(s) 209
Bse3DI GCAATG 1 cut(s) 741
BseBI CCWGG 3 cut(s) 170, 936, 1071
BseDI CCNNGG 5 cut(s) 270, 370, 875, 899, 1176
BseGI GGATG 2 cut(s) 59, 1234
BseLI CCNNNNNNNGG 7 cut(s) 155, 156, 169, 175, 881, 1076, 1182
BseMI GCAATG 1 cut(s) 741
BseMII CTCAG 3 cut(s) 178, 530, 984
BseNI ACTGG 1 cut(s) 209
BseRI GAGGAG 5 cut(s) 30, 480, 851, 1193, 1337
BseXI GCAGC 3 cut(s) 345, 366, 750
BsgI GTGCAG 1 cut(s) 365
Bsh1236I CGCG 1 cut(s) 1057
BshFI GGCC 7 cut(s) 107, 148, 375, 766, 939, 1047, 1069
BshNI GGYRCC 2 cut(s) 414, 1172
BsiHKAI GWGCWC 1 cut(s) 1150
BsiSI CCGG 3 cut(s) 122, 411, 899
BslFI GGGAC 2 cut(s) 917, 993
BslI CCNNNNNNNGG 7 cut(s) 155, 156, 169, 175, 881, 1076, 1182
BsmAI GTCTC 4 cut(s) 444, 476, 800, 974
BsmBI CGTCTC 1 cut(s) 800
BsmFI GGGAC 2 cut(s) 917, 993
BsnI GGCC 7 cut(s) 107, 148, 375, 766, 939, 1047, 1069
Bso31I GGTCTC 1 cut(s) 974
Bsp1286I GDGCHC 1 cut(s) 1150
BspACI CCGC 4 cut(s) 116, 119, 736, 746
BspANI GGCC 7 cut(s) 107, 148, 375, 766, 939, 1047, 1069
BspCNI CTCAG 3 cut(s) 177, 531, 985
BspFNI CGCG 1 cut(s) 1057
BspHI TCATGA 2 cut(s) 318, 550
BspLI GGNNCC 8 cut(s) 149, 161, 179, 416, 921, 981, 1174, 1218
BspMAI CTGCAG 1 cut(s) 335
BspPI GGATC 5 cut(s) 286, 863, 914, 927, 1095
BspT107I GGYRCC 2 cut(s) 414, 1172
BspTI CTTAAG 1 cut(s) 1004
BspTNI GGTCTC 1 cut(s) 974
BsrDI GCAATG 1 cut(s) 741
BsrI ACTGG 1 cut(s) 209
BssECI CCNNGG 5 cut(s) 270, 370, 875, 899, 1176
BssNI GRCGYC 2 cut(s) 366, 752
BssT1I CCWWGG 2 cut(s) 270, 875
Bst2UI CCWGG 3 cut(s) 170, 936, 1071
Bst4CI ACNGT 3 cut(s) 14, 349, 566
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 2 cut(s) 366, 752
BstAFI CTTAAG 1 cut(s) 1004
BstC8I GCNNGC 2 cut(s) 377, 501
BstDEI CTNAG 4 cut(s) 164, 539, 846, 993
BstDSI CCRYGG 1 cut(s) 370
BstENI CCTNNNNNAGG 1 cut(s) 879
BstF5I GGATG 2 cut(s) 59, 1234
BstFNI CGCG 1 cut(s) 1057
BstHHI GCGC 1 cut(s) 1057
BstMAI GTCTC 4 cut(s) 444, 476, 800, 974
BstMWI GCNNNNNNNGC 3 cut(s) 124, 666, 1343
BstNI CCWGG 3 cut(s) 170, 936, 1071
BstNSI RCATGY 1 cut(s) 647
BstSCI CCNGG 5 cut(s) 168, 410, 898, 934, 1069
BstSFI CTRYAG 1 cut(s) 331
BstUI CGCG 1 cut(s) 1057
BstV1I GCAGC 3 cut(s) 345, 366, 750
BstV2I GAAGAC 3 cut(s) 190, 201, 433
BstX2I RGATCY 2 cut(s) 291, 919
BstXI CCANNNNNNTGG 1 cut(s) 144
BstYI RGATCY 2 cut(s) 291, 919
BsuRI GGCC 7 cut(s) 107, 148, 375, 766, 939, 1047, 1069
BtgI CCRYGG 1 cut(s) 370
BtrI CACGTC 1 cut(s) 907
BtsCI GGATG 2 cut(s) 59, 1234
BtsIMutI CAGTG 1 cut(s) 990
Cac8I GCNNGC 2 cut(s) 377, 501
CaiI CAGNNNCTG 1 cut(s) 1356
CciI TCATGA 2 cut(s) 318, 550
CfoI GCGC 1 cut(s) 1057
Cfr13I GGNCC 4 cut(s) 147, 178, 980, 1046
CseI GACGC 3 cut(s) 304, 678, 760
Csp6I GTAC 5 cut(s) 415, 562, 567, 1096, 1173
CspCI CAANNNNNGTGG 2 cut(s) 84, 119
CviQI GTAC 5 cut(s) 415, 562, 567, 1096, 1173
DdeI CTNAG 4 cut(s) 164, 539, 846, 993
DrdI GACNNNNNNGTC 1 cut(s) 347
DseDI GACNNNNNNGTC 1 cut(s) 347
EaeI YGGCCR 2 cut(s) 105, 373
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
EciI GGCGGA 1 cut(s) 105
Eco130I CCWWGG 2 cut(s) 270, 875
Eco31I GGTCTC 1 cut(s) 974
Eco47I GGWCC 2 cut(s) 178, 980
EcoNI CCTNNNNNAGG 1 cut(s) 879
EcoO109I RGGNCCY 2 cut(s) 980, 1046
EcoRI GAATTC 2 cut(s) 131, 799
EcoRII CCWGG 3 cut(s) 168, 934, 1069
EcoT14I CCWWGG 2 cut(s) 270, 875
ErhI CCWWGG 2 cut(s) 270, 875
Esp3I CGTCTC 1 cut(s) 800
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 2 cut(s) 917, 993
FbaI TGATCA 2 cut(s) 1105, 1231
Fnu4HI GCNGC 4 cut(s) 119, 334, 380, 739
FokI GGATG 2 cut(s) 46, 1221
Fsp4HI GCNGC 4 cut(s) 119, 334, 380, 739
FspBI CTAG 2 cut(s) 128, 852
GlaI GCGC 1 cut(s) 1056
GluI GCNGC 4 cut(s) 119, 334, 380, 739
GsuI CTGGAG 3 cut(s) 72, 191, 1134
HaeIII GGCC 7 cut(s) 107, 148, 375, 766, 939, 1047, 1069
HapII CCGG 3 cut(s) 122, 411, 899
HgaI GACGC 3 cut(s) 304, 678, 760
HhaI GCGC 1 cut(s) 1057
Hin1I GRCGYC 2 cut(s) 366, 752
Hin6I GCGC 1 cut(s) 1055
HinP1I GCGC 1 cut(s) 1055
HincII GTYRAC 1 cut(s) 460
HindII GTYRAC 1 cut(s) 460
HinfI GANTC 9 cut(s) 50, 184, 341, 432, 554, 582, 895, 1118, 1313
HpaII CCGG 3 cut(s) 122, 411, 899
HphI GGTGA 1 cut(s) 760
Hpy166II GTNNAC 3 cut(s) 370, 460, 1098
Hpy188I TCNGA 9 cut(s) 49, 424, 516, 540, 805, 919, 948, 1034, 1318
Hpy8I GTNNAC 3 cut(s) 370, 460, 1098
Hpy99I CGWCG 6 cut(s) 329, 353, 356, 368, 389, 424
HpyAV CCTTC 6 cut(s) 149, 502, 668, 875, 933, 1037
HpyCH4III ACNGT 3 cut(s) 14, 349, 566
HpyCH4IV ACGT 3 cut(s) 366, 387, 906
HpyCH4V TGCA 4 cut(s) 9, 333, 382, 990
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 666, 1343
HpyF3I CTNAG 4 cut(s) 164, 539, 846, 993
HpySE526I ACGT 3 cut(s) 366, 387, 906
Hsp92I GRCGYC 2 cut(s) 366, 752
HspAI GCGC 1 cut(s) 1055
KpnI GGTACC 2 cut(s) 418, 1176
Ksp22I TGATCA 2 cut(s) 1105, 1231
LmnI GCTCC 5 cut(s) 124, 467, 949, 1153, 1270
Lsp1109I GCAGC 3 cut(s) 345, 366, 750
LweI GCATC 4 cut(s) 397, 507, 1042, 1346
MaeI CTAG 2 cut(s) 128, 852
MaeII ACGT 3 cut(s) 366, 387, 906
MaeIII GTNAC 1 cut(s) 748
MfeI CAATTG 2 cut(s) 1260, 1308
MflI RGATCY 2 cut(s) 291, 919
MhlI GDGCHC 1 cut(s) 1150
MlsI TGGCCA 1 cut(s) 107
MluCI AATT 7 cut(s) 131, 233, 799, 1163, 1225, 1260, 1308
MluNI TGGCCA 1 cut(s) 107
MlyI GAGTC 2 cut(s) 335, 1127
MmeI TCCRAC 3 cut(s) 402, 897, 1308
Mox20I TGGCCA 1 cut(s) 107
MroXI GAANNNNTTC 1 cut(s) 678
MscI TGGCCA 1 cut(s) 107
MseI TTAA 4 cut(s) 401, 603, 759, 1005
MslI CAYNNNNRTG 1 cut(s) 746
Msp20I TGGCCA 1 cut(s) 107
MspA1I CMGCKG 1 cut(s) 379
MspCI CTTAAG 1 cut(s) 1004
MspI CCGG 3 cut(s) 122, 411, 899
MspR9I CCNGG 5 cut(s) 170, 412, 900, 936, 1071
MunI CAATTG 2 cut(s) 1260, 1308
MvaI CCWGG 3 cut(s) 170, 936, 1071
MvnI CGCG 1 cut(s) 1057
MwoI GCNNNNNNNGC 3 cut(s) 124, 666, 1343
NciI CCSGG 2 cut(s) 412, 900
NlaIV GGNNCC 8 cut(s) 149, 161, 179, 416, 921, 981, 1174, 1218
NmuCI GTSAC 1 cut(s) 748
NspI RCATGY 1 cut(s) 647
PagI TCATGA 2 cut(s) 318, 550
PciI ACATGT 1 cut(s) 643
PcsI WCGNNNNNNNCGW 2 cut(s) 360, 923
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 7 cut(s) 50, 184, 432, 554, 582, 895, 1313
PflMI CCANNNNNTGG 1 cut(s) 1076
PkrI GCNGC 4 cut(s) 120, 335, 381, 740
PleI GAGTC 2 cut(s) 335, 1126
PpsI GAGTC 2 cut(s) 335, 1126
PpuMI RGGWCCY 1 cut(s) 980
PscI ACATGT 1 cut(s) 643
PsiI TTATAA 1 cut(s) 698
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 3 cut(s) 168, 934, 1069
PspGI CCWGG 3 cut(s) 168, 934, 1069
PspN4I GGNNCC 8 cut(s) 149, 161, 179, 416, 921, 981, 1174, 1218
PspPI GGNCC 4 cut(s) 147, 178, 980, 1046
PspPPI RGGWCCY 1 cut(s) 980
PstI CTGCAG 1 cut(s) 335
PstNI CAGNNNCTG 1 cut(s) 1356
PsuI RGATCY 2 cut(s) 291, 919
PvuII CAGCTG 1 cut(s) 379
RsaI GTAC 5 cut(s) 416, 563, 568, 1097, 1174
RsaNI GTAC 5 cut(s) 415, 562, 567, 1096, 1173
RseI CAYNNNNRTG 1 cut(s) 746
SaqAI TTAA 4 cut(s) 401, 603, 759, 1005
SatI GCNGC 4 cut(s) 119, 334, 380, 739
Sau96I GGNCC 4 cut(s) 147, 178, 980, 1046
ScaI AGTACT 1 cut(s) 563
SchI GAGTC 2 cut(s) 335, 1127
ScrFI CCNGG 5 cut(s) 170, 412, 900, 936, 1071
SduI GDGCHC 1 cut(s) 1150
SfaNI GCATC 4 cut(s) 397, 507, 1042, 1346
SfcI CTRYAG 1 cut(s) 331
SinI GGWCC 2 cut(s) 178, 980
SmiMI CAYNNNNRTG 1 cut(s) 746
SmlI CTYRAG 3 cut(s) 479, 1004, 1019
SmoI CTYRAG 3 cut(s) 479, 1004, 1019
Sse9I AATT 7 cut(s) 131, 233, 799, 1163, 1225, 1260, 1308
SsiI CCGC 4 cut(s) 116, 119, 736, 746
SspMI CTAG 2 cut(s) 128, 852
StyD4I CCNGG 5 cut(s) 168, 410, 898, 934, 1069
StyI CCWWGG 2 cut(s) 270, 875
TaaI ACNGT 3 cut(s) 14, 349, 566
TaiI ACGT 3 cut(s) 369, 390, 909
TaqI TCGA 6 cut(s) 141, 201, 264, 324, 585, 926
TasI AATT 7 cut(s) 131, 233, 799, 1163, 1225, 1260, 1308
TatI WGTACW 2 cut(s) 561, 566
TauI GCSGC 1 cut(s) 121
TfiI GAWTC 7 cut(s) 50, 184, 432, 554, 582, 895, 1313
Tru1I TTAA 4 cut(s) 401, 603, 759, 1005
Tru9I TTAA 4 cut(s) 401, 603, 759, 1005
TscAI CASTG 1 cut(s) 997
TseFI GTSAC 1 cut(s) 748
TseI GCWGC 3 cut(s) 333, 379, 738
Tsp45I GTSAC 1 cut(s) 748
TspDTI ATGAA 8 cut(s) 72, 567, 606, 812, 944, 1056, 1235, 1314
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 1 cut(s) 997
Van91I CCANNNNNTGG 1 cut(s) 1076
Vha464I CTTAAG 1 cut(s) 1004
VpaK11BI GGWCC 2 cut(s) 178, 980
XagI CCTNNNNNAGG 1 cut(s) 879
XapI RAATTY 2 cut(s) 131, 799
XceI RCATGY 1 cut(s) 647
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 2 cut(s) 128, 852
ZraI GACGTC 1 cut(s) 367
ZrmI AGTACT 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.