MD02G1166500.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
14266244 .. 14270729
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1166500.v1.1.491

Sequence Viewer

Length: 1080 bp
ATGGATCGGCAGTCGATGACGGTCGGGCCGGCCATGGACATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGAGATATCGGGTCAGGAAACTTCGGGGTCGCCAGGCTGATGACGGACAAGCAGACCAAAGAGCTCGTCGCCGTCAAGTACATCGAGCGCGGCAGCAAGATTGATGAAAATGTTAAAAGAGAGATAATAAATCACAGGTCTCTGAGGCACCCGAACATCATTAGATTCAAGGAGGTCATTCTGACTCCTACCCATCTGGCCATTGTTATGGAATATGCTGCCGGAGGAGAAATGTTTGAGCGAATAAGCAATGCAGGGCGGTTCAGTGAGGATGAGGCCCGCTTCTTTTTTCAACAACTTATATCTGGAGTCAGCTATTGCCATGCCATGCAAGTATGTCACCGAGACTTGAAGTTGGAAAACACTTTGTTGGATGGCAGTCCAGCTCCTCGTTTGAAAATATGTGATTTTGGGTACTCAAAGTCTTCAGTGCTTCATTCACAACCAAAATCTACTGTGGGAACTCCTGCATACATCGCTCCAGAAGTATTACTGAGGCAAGAATACGACGGAAAGATTGCAGATGTATGGTCATGTGGGGTAACCTTATATGTGATGCTTATGGGAGCATATCCTTTCGAGGATCCTGATGAACCGAAAGATTTCCGGAAGACCATACAAAGGATACTCAGCGTCCAATATTCCATTCCAGATACTGTTCAAATATCTCATGAATGTCTAGAGCTGATATCAAGAATTTTTGTCCCAGATCCTTCTGCGAGAATTACCATTCCTGAGATAAAGAACCATCCGTGGTTCTTGAAGAATCTCCCTGCTGATCTGATGGACGAGGGCAACCAGTTCGAAGAGCCTGATCAACCCATGCAAAGCCTTGACGCAATCATGCAAATCATTGCCGAGGCCACTATACCAGCAGCTGGAACCCTTGGTCTGAGCCCTTACATGACGGACAACCTGGACATGGACGATGATATGGACGACTTAGACTCAGAGTCTGAACTTGATGTTGATAGCAGCGGGGAAATAGTCTACGCAATTTAA

Protein Analysis

360

Amino Acids

40.54

Weight (kDa)

4.69

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 23 - 279 2e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 275 7.9e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 225
AccB7I CCANNNNNTGG 1 cut(s) 956
AccI GTMKAC 1 cut(s) 1068
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 1 cut(s) 684
AciI CCGC 4 cut(s) 168, 337, 358, 1056
AclWI GGATC 4 cut(s) 12, 656, 669, 782
AcoI YGGCCR 2 cut(s) 30, 276
AcsI RAATTY 1 cut(s) 774
AcuI CTGAAG 1 cut(s) 489
AfaI GTAC 3 cut(s) 68, 158, 494
AfiI CCNNNNNNNGG 3 cut(s) 699, 956, 1000
AgeI ACCGGT 1 cut(s) 63
AgsI TTSAA 6 cut(s) 247, 371, 430, 475, 740, 841
AhdI GACNNNNNGTC 1 cut(s) 1030
AjnI CCWGG 2 cut(s) 110, 993
AjuI GAANNNNNNNTTGG 2 cut(s) 708, 740
AluBI AGCT 5 cut(s) 142, 393, 464, 763, 956
AluI AGCT 5 cut(s) 142, 393, 464, 763, 956
Alw21I GWGCWC 1 cut(s) 144
Alw26I GTCTC 2 cut(s) 222, 417
AlwI GGATC 4 cut(s) 12, 656, 669, 782
AlwNI CAGNNNCTG 3 cut(s) 734, 956, 1034
Aor13HI TCCGGA 1 cut(s) 684
AoxI GGCC 5 cut(s) 26, 30, 276, 354, 939
ApeKI GCWGC 4 cut(s) 171, 296, 953, 1053
ApoI RAATTY 1 cut(s) 774
ArsI GACNNNNNNTTYG 2 cut(s) 129, 161
AsiGI ACCGGT 1 cut(s) 63
Asp700I GAANNNNTTC 1 cut(s) 680
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 2 cut(s) 26, 355
AsuHPI GGTGA 1 cut(s) 410
AsuII TTCGAA 1 cut(s) 882
BalI TGGCCA 1 cut(s) 278
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 225
BanII GRGCYC 2 cut(s) 144, 977
BbsI GAAGAC 2 cut(s) 495, 695
Bbv12I GWGCWC 1 cut(s) 144
BbvI GCAGC 4 cut(s) 183, 283, 965, 1065
BccI CCATC 4 cut(s) 279, 446, 834, 856
BceAI ACGGC 1 cut(s) 134
BcgI CGANNNNNNTGC 2 cut(s) 862, 896
BciT130I CCWGG 2 cut(s) 112, 995
BciVI GTATCC 1 cut(s) 696
BclI TGATCA 1 cut(s) 892
BcoDI GTCTC 2 cut(s) 222, 417
BfaI CTAG 1 cut(s) 758
BfuI GTATCC 1 cut(s) 696
BisI GCNGC 5 cut(s) 169, 172, 297, 954, 1054
BlsI GCNGC 5 cut(s) 170, 173, 298, 955, 1055
Bme1390I CCNGG 2 cut(s) 112, 995
BmeRI GACNNNNNGTC 1 cut(s) 1030
BmgT120I GGNCC 2 cut(s) 26, 355
BmiI GGNNCC 3 cut(s) 227, 663, 961
BmrFI CCNGG 2 cut(s) 112, 995
BmsI GCATC 1 cut(s) 624
BpiI GAAGAC 2 cut(s) 495, 695
BpmI CTGGAG 2 cut(s) 405, 543
Bpu14I TTCGAA 1 cut(s) 882
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 33, 830, 936, 964
BsaWI WCCGGW 2 cut(s) 63, 684
Bsc4I CCNNNNNNNGG 3 cut(s) 699, 956, 1000
Bse118I RCCGGY 2 cut(s) 28, 63
Bse1I ACTGG 1 cut(s) 877
Bse3DI GCAATG 2 cut(s) 334, 930
BseAI TCCGGA 1 cut(s) 684
BseBI CCWGG 2 cut(s) 112, 995
BseDI CCNNGG 4 cut(s) 33, 830, 936, 964
BseGI GGATG 3 cut(s) 355, 457, 826
BseLI CCNNNNNNNGG 3 cut(s) 699, 956, 1000
BseMI GCAATG 2 cut(s) 334, 930
BseMII CTCAG 6 cut(s) 212, 563, 721, 804, 962, 1041
BseNI ACTGG 1 cut(s) 877
BseRI GAGGAG 2 cut(s) 318, 456
BseXI GCAGC 4 cut(s) 183, 283, 965, 1065
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 2 cut(s) 24, 64
BshFI GGCC 5 cut(s) 28, 32, 278, 356, 941
BshNI GGYRCC 1 cut(s) 225
BshTI ACCGGT 1 cut(s) 63
BsiEI CGRYCG 2 cut(s) 24, 64
BsiHKAI GWGCWC 1 cut(s) 144
BsiSI CCGG 4 cut(s) 29, 64, 300, 685
BslFI GGGAC 1 cut(s) 767
BslI CCNNNNNNNGG 3 cut(s) 699, 956, 1000
BsmAI GTCTC 2 cut(s) 222, 417
BsmFI GGGAC 1 cut(s) 767
BsnI GGCC 5 cut(s) 28, 32, 278, 356, 941
Bso31I GGTCTC 1 cut(s) 222
Bsp119I TTCGAA 1 cut(s) 882
Bsp1286I GDGCHC 2 cut(s) 144, 977
Bsp13I TCCGGA 1 cut(s) 684
Bsp143I GATC 6 cut(s) 4, 45, 661, 787, 856, 892
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 4 cut(s) 168, 337, 358, 1056
BspANI GGCC 5 cut(s) 28, 32, 278, 356, 941
BspCNI CTCAG 6 cut(s) 213, 564, 720, 805, 963, 1040
BspEI TCCGGA 1 cut(s) 684
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 3 cut(s) 227, 663, 961
BspPI GGATC 4 cut(s) 12, 656, 669, 782
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 1 cut(s) 882
BspT107I GGYRCC 1 cut(s) 225
BspTNI GGTCTC 1 cut(s) 222
BsrDI GCAATG 2 cut(s) 334, 930
BsrFI RCCGGY 2 cut(s) 28, 63
BsrI ACTGG 1 cut(s) 877
BssAI RCCGGY 2 cut(s) 28, 63
BssECI CCNNGG 4 cut(s) 33, 830, 936, 964
BssMI GATC 6 cut(s) 4, 45, 661, 787, 856, 892
BssT1I CCWWGG 2 cut(s) 33, 964
Bst2UI CCWGG 2 cut(s) 112, 995
Bst4CI ACNGT 3 cut(s) 22, 535, 736
Bst6I CTCTTC 1 cut(s) 879
BstBI TTCGAA 1 cut(s) 882
BstC8I GCNNGC 2 cut(s) 30, 358
BstDEI CTNAG 7 cut(s) 221, 572, 707, 813, 971, 1021, 1027
BstDSI CCRYGG 2 cut(s) 33, 830
BstEII GGTNACC 1 cut(s) 619
BstF5I GGATG 3 cut(s) 355, 457, 826
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 6 cut(s) 7, 48, 664, 790, 859, 895
BstMAI GTCTC 2 cut(s) 222, 417
BstMBI GATC 6 cut(s) 4, 45, 661, 787, 856, 892
BstMCI CGRYCG 2 cut(s) 24, 64
BstMWI GCNNNNNNNGC 2 cut(s) 49, 554
BstNI CCWGG 2 cut(s) 112, 995
BstNSI RCATGY 1 cut(s) 43
BstPI GGTNACC 1 cut(s) 619
BstSCI CCNGG 2 cut(s) 110, 993
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 4 cut(s) 183, 283, 965, 1065
BstV2I GAAGAC 2 cut(s) 495, 695
BstX2I RGATCY 2 cut(s) 661, 787
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 2 cut(s) 661, 787
BsuI GTATCC 1 cut(s) 696
BsuRI GGCC 5 cut(s) 28, 32, 278, 356, 941
BtgI CCRYGG 2 cut(s) 33, 830
BtgZI GCGATG 1 cut(s) 538
BtsCI GGATG 3 cut(s) 355, 457, 826
BtsIMutI CAGTG 2 cut(s) 349, 513
Cac8I GCNNGC 2 cut(s) 30, 358
CaiI CAGNNNCTG 3 cut(s) 734, 956, 1034
CciI TCATGA 1 cut(s) 748
CfoI GCGC 1 cut(s) 168
Cfr10I RCCGGY 2 cut(s) 28, 63
Cfr13I GGNCC 2 cut(s) 26, 355
CseI GACGC 2 cut(s) 700, 923
Csp6I GTAC 3 cut(s) 67, 157, 493
CspAI ACCGGT 1 cut(s) 63
CviQI GTAC 3 cut(s) 67, 157, 493
DdeI CTNAG 7 cut(s) 221, 572, 707, 813, 971, 1021, 1027
DpnI GATC 6 cut(s) 6, 47, 663, 789, 858, 894
DpnII GATC 6 cut(s) 4, 45, 661, 787, 856, 892
DriI GACNNNNNGTC 1 cut(s) 1030
EaeI YGGCCR 2 cut(s) 30, 276
Eam1104I CTCTTC 1 cut(s) 879
Eam1105I GACNNNNNGTC 1 cut(s) 1030
EarI CTCTTC 1 cut(s) 879
Ecl136II GAGCTC 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 33, 964
Eco24I GRGCYC 2 cut(s) 144, 977
Eco31I GGTCTC 1 cut(s) 222
Eco32I GATATC 2 cut(s) 85, 768
Eco53kI GAGCTC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 489
Eco91I GGTNACC 1 cut(s) 619
EcoICRI GAGCTC 1 cut(s) 142
EcoO65I GGTNACC 1 cut(s) 619
EcoRII CCWGG 2 cut(s) 110, 993
EcoRV GATATC 2 cut(s) 85, 768
EcoT14I CCWWGG 2 cut(s) 33, 964
EcoT38I GRGCYC 2 cut(s) 144, 977
ErhI CCWWGG 2 cut(s) 33, 964
FaqI GGGAC 1 cut(s) 767
FauI CCCGC 2 cut(s) 365, 1049
FbaI TGATCA 1 cut(s) 892
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 5 cut(s) 169, 172, 297, 954, 1054
FokI GGATG 3 cut(s) 362, 464, 813
FriOI GRGCYC 2 cut(s) 144, 977
FseI GGCCGGCC 1 cut(s) 32
Fsp4HI GCNGC 5 cut(s) 169, 172, 297, 954, 1054
FspBI CTAG 1 cut(s) 758
GlaI GCGC 1 cut(s) 167
GluI GCNGC 5 cut(s) 169, 172, 297, 954, 1054
GsuI CTGGAG 2 cut(s) 405, 543
HaeIII GGCC 5 cut(s) 28, 32, 278, 356, 941
HapII CCGG 4 cut(s) 29, 64, 300, 685
HgaI GACGC 2 cut(s) 700, 923
HhaI GCGC 1 cut(s) 168
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HinfI GANTC 6 cut(s) 243, 262, 387, 844, 1025, 1031
HpaII CCGG 4 cut(s) 29, 64, 300, 685
HphI GGTGA 1 cut(s) 410
Hpy166II GTNNAC 1 cut(s) 1069
Hpy188I TCNGA 7 cut(s) 80, 222, 261, 861, 972, 1030, 1036
Hpy8I GTNNAC 1 cut(s) 1069
Hpy99I CGWCG 2 cut(s) 149, 590
HpyAV CCTTC 1 cut(s) 801
HpyCH4III ACNGT 3 cut(s) 22, 535, 736
HpyCH4V TGCA 7 cut(s) 52, 332, 409, 548, 599, 904, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 49, 554
HpyF3I CTNAG 7 cut(s) 221, 572, 707, 813, 971, 1021, 1027
HspAI GCGC 1 cut(s) 166
Kpn2I TCCGGA 1 cut(s) 684
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Ksp22I TGATCA 1 cut(s) 892
Kzo9I GATC 6 cut(s) 4, 45, 661, 787, 856, 892
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 3 cut(s) 469, 562, 644
Lsp1109I GCAGC 4 cut(s) 183, 283, 965, 1065
LweI GCATC 1 cut(s) 624
MaeI CTAG 1 cut(s) 758
MaeIII GTNAC 2 cut(s) 416, 619
MalI GATC 6 cut(s) 6, 47, 663, 789, 858, 894
MboI GATC 6 cut(s) 4, 45, 661, 787, 856, 892
MboII GAAGA 4 cut(s) 495, 700, 853, 896
MflI RGATCY 2 cut(s) 661, 787
MhlI GDGCHC 2 cut(s) 144, 977
MlsI TGGCCA 1 cut(s) 278
MluCI AATT 3 cut(s) 774, 801, 1074
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 4 cut(s) 256, 396, 1019, 1040
MmeI TCCRAC 2 cut(s) 414, 429
Mox20I TGGCCA 1 cut(s) 278
MroI TCCGGA 1 cut(s) 684
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 680
MscI TGGCCA 1 cut(s) 278
MseI TTAA 2 cut(s) 192, 1078
MslI CAYNNNNRTG 2 cut(s) 38, 284
Msp20I TGGCCA 1 cut(s) 278
MspA1I CMGCKG 2 cut(s) 956, 1056
MspI CCGG 4 cut(s) 29, 64, 300, 685
MspR9I CCNGG 2 cut(s) 112, 995
MvaI CCWGG 2 cut(s) 112, 995
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 49, 554
NaeI GCCGGC 1 cut(s) 30
NcoI CCATGG 1 cut(s) 33
NdeII GATC 6 cut(s) 4, 45, 661, 787, 856, 892
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 3 cut(s) 227, 663, 961
NmeAIII GCCGAG 1 cut(s) 961
NmuCI GTSAC 1 cut(s) 416
NspI RCATGY 1 cut(s) 43
NspV TTCGAA 1 cut(s) 882
PagI TCATGA 1 cut(s) 748
PciSI GCTCTTC 1 cut(s) 879
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 680
PfeI GAWTC 2 cut(s) 243, 844
PflMI CCANNNNNTGG 1 cut(s) 956
PinAI ACCGGT 1 cut(s) 63
PkrI GCNGC 5 cut(s) 170, 173, 298, 955, 1055
PleI GAGTC 4 cut(s) 256, 395, 1019, 1039
PpsI GAGTC 4 cut(s) 256, 395, 1019, 1039
Psp124BI GAGCTC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 110, 993
PspEI GGTNACC 1 cut(s) 619
PspGI CCWGG 2 cut(s) 110, 993
PspN4I GGNNCC 3 cut(s) 227, 663, 961
PspPI GGNCC 2 cut(s) 26, 355
PstNI CAGNNNCTG 3 cut(s) 734, 956, 1034
PsuI RGATCY 2 cut(s) 661, 787
PvuII CAGCTG 1 cut(s) 956
RigI GGCCGGCC 1 cut(s) 32
RsaI GTAC 3 cut(s) 68, 158, 494
RsaNI GTAC 3 cut(s) 67, 157, 493
RseI CAYNNNNRTG 2 cut(s) 38, 284
SacI GAGCTC 1 cut(s) 144
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 2 cut(s) 192, 1078
SatI GCNGC 5 cut(s) 169, 172, 297, 954, 1054
Sau3AI GATC 6 cut(s) 4, 45, 661, 787, 856, 892
Sau96I GGNCC 2 cut(s) 26, 355
SchI GAGTC 4 cut(s) 256, 396, 1019, 1040
ScrFI CCNGG 2 cut(s) 112, 995
SduI GDGCHC 2 cut(s) 144, 977
SetI ASST 9 cut(s) 144, 218, 255, 395, 466, 626, 765, 958, 996
SfaNI GCATC 1 cut(s) 624
SfuI TTCGAA 1 cut(s) 882
SmiMI CAYNNNNRTG 2 cut(s) 38, 284
Sse9I AATT 3 cut(s) 774, 801, 1074
SsiI CCGC 4 cut(s) 168, 337, 358, 1056
SspI AATATT 1 cut(s) 719
SspMI CTAG 1 cut(s) 758
SstI GAGCTC 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 110, 993
StyI CCWWGG 2 cut(s) 33, 964
TaaI ACNGT 3 cut(s) 22, 535, 736
TaqI TCGA 4 cut(s) 14, 162, 657, 882
TasI AATT 3 cut(s) 774, 801, 1074
TatI WGTACW 1 cut(s) 156
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 2 cut(s) 243, 844
Tru1I TTAA 2 cut(s) 192, 1078
Tru9I TTAA 2 cut(s) 192, 1078
TscAI CASTG 2 cut(s) 349, 513
TseFI GTSAC 1 cut(s) 416
TseI GCWGC 4 cut(s) 171, 296, 953, 1053
Tsp45I GTSAC 1 cut(s) 416
TspDTI ATGAA 4 cut(s) 198, 503, 684, 765
TspGWI ACGGA 4 cut(s) 137, 603, 819, 1001
TspRI CASTG 2 cut(s) 349, 513
Van91I CCANNNNNTGG 1 cut(s) 956
XapI RAATTY 1 cut(s) 774
XbaI TCTAGA 1 cut(s) 757
XceI RCATGY 1 cut(s) 43
XmiI GTMKAC 1 cut(s) 1068
XmnI GAANNNNTTC 1 cut(s) 680
XspI CTAG 1 cut(s) 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.