MD15G1279000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
24695317 .. 24700361
5045 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1279000.v1.1.491

Sequence Viewer

Length: 1080 bp
ATGGATCGGCAGGCAATGACGGTTGGGCCGGCCATGGATATGCCTATCATGCACGACAGCGACCGGTATGATTTCGTCCGAGATATCGGGTCCGGAAACTTCGGGGTCGCCAGGCTGATGACGGACAGGCAGACCAGGGAGCTCGTCGCCGTCAAGTACATCGAGCGCGGCAACAAGATTGATGAAAATGTTCGAAGAGAGATAATAAATCATAGGTCTTTGAGGCACCCGAACATCATCAGATTCAAGGAGGTCATTCTTACTCCTACCCATCTGGCCATTGTGATGGAATATGCTTCTGGAGGAGAAATGTTTGAGCGAATACACAATGCAGGGCGGTTCAGTGAGGATGAGGCCCGCTTCTTTTTTCAACAACTTATATCTGGAGTTAGTTATTGCCATGCTATGCAAGTATGTCACCGAGATTTGAAGTTGGAGAACACTTTATTGGATGGCAGTCAAGCTCCTCGTTTGAAAATTTGTGATTTTGGGTACTCAAAGTCTTCAGTGCTTCATTCACAACCAAAATCTACTGTGGGAACTCCTGCATACATTGCTCCAGAAGTATTATTGAGGCAAGAATATGACGGAAAGATTGCAGATGTATGGTCATGTGGGGTAACCTTATATGTGATGCTGGTGGGAGCATATCCTTTCGAGGATCCTGATGAACCGAAAGATTTCCGGAGGACTATACAAAGGATACTCAGCGTCCAGTATTCCATTCCAGATACTGTTCAAATATCTCATGAATGTCTAGAGCTGATATCGAGAATTTTTGTCCCAGATCCTGCTGCGAGAATTAGCATTCCTGAGATAAAGAACCACTCGTGGTTCTTGAAGAATCTCCCTGCTGATTTGATGGACGAGAGCAACCAGTTTGAAGAGCCAGATCAACCAATGCAAAGCCTTGACGCAATCATGCATATAATTGAGGAGGCTACTATACCAGCAGCGGGAACCCTTGGTCTGGGCTCGTACATGATGGACAACCTTGACATGGACGATGATATGGATGACTTAGACTCAGAGTCTGAACTTGATGTTGATAGCAGCGGGGAAATAGTGTACGCAATTTAA

Protein Analysis

360

Amino Acids

40.77

Weight (kDa)

4.73

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 23 - 279 1e-72 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 275 1.4e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 225
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 2 cut(s) 92, 684
AciI CCGC 5 cut(s) 168, 337, 358, 956, 1056
AclWI GGATC 4 cut(s) 12, 656, 669, 782
AcoI YGGCCR 2 cut(s) 30, 276
AcsI RAATTY 2 cut(s) 477, 774
AcuI CTGAAG 1 cut(s) 489
AfaI GTAC 4 cut(s) 158, 494, 980, 1070
AfiI CCNNNNNNNGG 3 cut(s) 956, 970, 1000
AgeI ACCGGT 1 cut(s) 63
AgsI TTSAA 7 cut(s) 247, 371, 430, 475, 740, 841, 884
AhdI GACNNNNNGTC 1 cut(s) 1030
AjnI CCWGG 2 cut(s) 110, 134
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AluBI AGCT 3 cut(s) 142, 464, 763
AluI AGCT 3 cut(s) 142, 464, 763
Alw21I GWGCWC 1 cut(s) 144
AlwI GGATC 4 cut(s) 12, 656, 669, 782
AlwNI CAGNNNCTG 3 cut(s) 734, 791, 1034
Aor13HI TCCGGA 2 cut(s) 92, 684
AoxI GGCC 4 cut(s) 26, 30, 276, 354
ApeKI GCWGC 3 cut(s) 794, 953, 1053
ApoI RAATTY 2 cut(s) 477, 774
AsiGI ACCGGT 1 cut(s) 63
Asp700I GAANNNNTTC 2 cut(s) 189, 680
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 3 cut(s) 26, 90, 355
AsuHPI GGTGA 1 cut(s) 410
AsuII TTCGAA 1 cut(s) 193
AvaII GGWCC 1 cut(s) 90
BalI TGGCCA 1 cut(s) 278
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 225
BanII GRGCYC 2 cut(s) 144, 977
BauI CACGAG 1 cut(s) 829
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 144
BbvI GCAGC 3 cut(s) 781, 965, 1065
BccI CCATC 5 cut(s) 279, 280, 446, 856, 979
BceAI ACGGC 1 cut(s) 134
BciT130I CCWGG 2 cut(s) 112, 136
BciVI GTATCC 1 cut(s) 696
BfaI CTAG 1 cut(s) 758
BfuI GTATCC 1 cut(s) 696
BisI GCNGC 4 cut(s) 169, 795, 954, 1054
BlsI GCNGC 4 cut(s) 170, 796, 955, 1055
Bme1390I CCNGG 2 cut(s) 112, 136
Bme18I GGWCC 1 cut(s) 90
BmeRI GACNNNNNGTC 1 cut(s) 1030
BmgT120I GGNCC 3 cut(s) 26, 90, 355
BmiI GGNNCC 4 cut(s) 91, 227, 663, 961
BmrFI CCNGG 2 cut(s) 112, 136
BmsI GCATC 1 cut(s) 624
BpiI GAAGAC 1 cut(s) 495
BpmI CTGGAG 3 cut(s) 321, 405, 543
Bpu14I TTCGAA 1 cut(s) 193
BsaJI CCNNGG 3 cut(s) 33, 135, 964
BsaWI WCCGGW 3 cut(s) 63, 92, 684
Bsc4I CCNNNNNNNGG 3 cut(s) 956, 970, 1000
Bse118I RCCGGY 2 cut(s) 28, 63
Bse1I ACTGG 2 cut(s) 715, 877
Bse3DI GCAATG 2 cut(s) 21, 552
BseAI TCCGGA 2 cut(s) 92, 684
BseBI CCWGG 2 cut(s) 112, 136
BseDI CCNNGG 3 cut(s) 33, 135, 964
BseGI GGATG 3 cut(s) 355, 457, 1021
BseLI CCNNNNNNNGG 3 cut(s) 956, 970, 1000
BseMI GCAATG 2 cut(s) 21, 552
BseMII CTCAG 3 cut(s) 721, 804, 1041
BseNI ACTGG 2 cut(s) 715, 877
BseRI GAGGAG 3 cut(s) 318, 456, 950
BseXI GCAGC 3 cut(s) 781, 965, 1065
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 4 cut(s) 28, 32, 278, 356
BshNI GGYRCC 1 cut(s) 225
BshTI ACCGGT 1 cut(s) 63
BsiEI CGRYCG 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 144
BsiSI CCGG 4 cut(s) 29, 64, 93, 685
BslFI GGGAC 1 cut(s) 767
BslI CCNNNNNNNGG 3 cut(s) 956, 970, 1000
BsmFI GGGAC 1 cut(s) 767
BsmI GAATGC 1 cut(s) 807
BsnI GGCC 4 cut(s) 28, 32, 278, 356
Bsp119I TTCGAA 1 cut(s) 193
Bsp1286I GDGCHC 2 cut(s) 144, 977
Bsp13I TCCGGA 2 cut(s) 92, 684
Bsp143I GATC 4 cut(s) 4, 661, 787, 892
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 5 cut(s) 168, 337, 358, 956, 1056
BspANI GGCC 4 cut(s) 28, 32, 278, 356
BspCNI CTCAG 3 cut(s) 720, 805, 1040
BspEI TCCGGA 2 cut(s) 92, 684
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 4 cut(s) 91, 227, 663, 961
BspPI GGATC 4 cut(s) 12, 656, 669, 782
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 1 cut(s) 193
BspT107I GGYRCC 1 cut(s) 225
BsrDI GCAATG 2 cut(s) 21, 552
BsrFI RCCGGY 2 cut(s) 28, 63
BsrI ACTGG 2 cut(s) 715, 877
BssAI RCCGGY 2 cut(s) 28, 63
BssECI CCNNGG 3 cut(s) 33, 135, 964
BssMI GATC 4 cut(s) 4, 661, 787, 892
BssSI CACGAG 1 cut(s) 829
BssT1I CCWWGG 2 cut(s) 33, 964
Bst2BI CACGAG 1 cut(s) 829
Bst2UI CCWGG 2 cut(s) 112, 136
Bst4CI ACNGT 3 cut(s) 22, 535, 736
Bst6I CTCTTC 2 cut(s) 190, 879
BstAPI GCANNNNNTGC 1 cut(s) 554
BstBI TTCGAA 1 cut(s) 193
BstC8I GCNNGC 3 cut(s) 12, 30, 358
BstDEI CTNAG 4 cut(s) 707, 813, 1021, 1027
BstDSI CCRYGG 1 cut(s) 33
BstEII GGTNACC 1 cut(s) 619
BstF5I GGATG 3 cut(s) 355, 457, 1021
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 4 cut(s) 7, 664, 790, 895
BstMBI GATC 4 cut(s) 4, 661, 787, 892
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 2 cut(s) 49, 554
BstNI CCWGG 2 cut(s) 112, 136
BstPI GGTNACC 1 cut(s) 619
BstSCI CCNGG 2 cut(s) 110, 134
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 3 cut(s) 781, 965, 1065
BstV2I GAAGAC 1 cut(s) 495
BstX2I RGATCY 2 cut(s) 661, 787
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 2 cut(s) 661, 787
BsuI GTATCC 1 cut(s) 696
BsuRI GGCC 4 cut(s) 28, 32, 278, 356
BtgI CCRYGG 1 cut(s) 33
BtsCI GGATG 3 cut(s) 355, 457, 1021
BtsIMutI CAGTG 2 cut(s) 349, 513
Cac8I GCNNGC 3 cut(s) 12, 30, 358
CaiI CAGNNNCTG 3 cut(s) 734, 791, 1034
CciI TCATGA 1 cut(s) 748
CfoI GCGC 1 cut(s) 168
Cfr10I RCCGGY 2 cut(s) 28, 63
Cfr13I GGNCC 3 cut(s) 26, 90, 355
CseI GACGC 2 cut(s) 700, 923
Csp6I GTAC 4 cut(s) 157, 493, 979, 1069
CspAI ACCGGT 1 cut(s) 63
CviAII CATG 8 cut(s) 34, 49, 401, 612, 749, 922, 982, 1000
CviQI GTAC 4 cut(s) 157, 493, 979, 1069
DdeI CTNAG 4 cut(s) 707, 813, 1021, 1027
DpnI GATC 4 cut(s) 6, 663, 789, 894
DpnII GATC 4 cut(s) 4, 661, 787, 892
DriI GACNNNNNGTC 1 cut(s) 1030
EaeI YGGCCR 2 cut(s) 30, 276
Eam1104I CTCTTC 2 cut(s) 190, 879
Eam1105I GACNNNNNGTC 1 cut(s) 1030
EarI CTCTTC 2 cut(s) 190, 879
Ecl136II GAGCTC 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 33, 964
Eco24I GRGCYC 2 cut(s) 144, 977
Eco32I GATATC 2 cut(s) 85, 768
Eco47I GGWCC 1 cut(s) 90
Eco53kI GAGCTC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 489
Eco91I GGTNACC 1 cut(s) 619
EcoICRI GAGCTC 1 cut(s) 142
EcoO65I GGTNACC 1 cut(s) 619
EcoRII CCWGG 2 cut(s) 110, 134
EcoRV GATATC 2 cut(s) 85, 768
EcoT14I CCWWGG 2 cut(s) 33, 964
EcoT22I ATGCAT 1 cut(s) 927
EcoT38I GRGCYC 2 cut(s) 144, 977
ErhI CCWWGG 2 cut(s) 33, 964
FaeI CATG 8 cut(s) 37, 52, 404, 615, 752, 925, 985, 1003
FaqI GGGAC 1 cut(s) 767
FatI CATG 8 cut(s) 33, 48, 400, 611, 748, 921, 981, 999
FauI CCCGC 3 cut(s) 365, 949, 1049
Fnu4HI GCNGC 4 cut(s) 169, 795, 954, 1054
FokI GGATG 3 cut(s) 362, 464, 1028
FriOI GRGCYC 2 cut(s) 144, 977
FseI GGCCGGCC 1 cut(s) 32
Fsp4HI GCNGC 4 cut(s) 169, 795, 954, 1054
FspBI CTAG 1 cut(s) 758
GlaI GCGC 1 cut(s) 167
GluI GCNGC 4 cut(s) 169, 795, 954, 1054
GsuI CTGGAG 3 cut(s) 321, 405, 543
HaeIII GGCC 4 cut(s) 28, 32, 278, 356
HapII CCGG 4 cut(s) 29, 64, 93, 685
HgaI GACGC 2 cut(s) 700, 923
HhaI GCGC 1 cut(s) 168
Hin1II CATG 8 cut(s) 37, 52, 404, 615, 752, 925, 985, 1003
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HinfI GANTC 4 cut(s) 243, 844, 1025, 1031
HpaII CCGG 4 cut(s) 29, 64, 93, 685
HphI GGTGA 1 cut(s) 410
Hpy166II GTNNAC 1 cut(s) 1069
Hpy188I TCNGA 4 cut(s) 80, 242, 1030, 1036
Hpy8I GTNNAC 1 cut(s) 1069
Hpy99I CGWCG 1 cut(s) 149
HpyCH4III ACNGT 3 cut(s) 22, 535, 736
HpyCH4V TGCA 7 cut(s) 52, 332, 409, 548, 599, 904, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 49, 554
HpyF3I CTNAG 4 cut(s) 707, 813, 1021, 1027
Hsp92II CATG 8 cut(s) 37, 52, 404, 615, 752, 925, 985, 1003
HspAI GCGC 1 cut(s) 166
Kpn2I TCCGGA 2 cut(s) 92, 684
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Kzo9I GATC 4 cut(s) 4, 661, 787, 892
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 4 cut(s) 139, 469, 562, 644
Lsp1109I GCAGC 3 cut(s) 781, 965, 1065
LweI GCATC 1 cut(s) 624
MaeI CTAG 1 cut(s) 758
MaeIII GTNAC 2 cut(s) 416, 619
MalI GATC 4 cut(s) 6, 663, 789, 894
MboI GATC 4 cut(s) 4, 661, 787, 892
MboII GAAGA 4 cut(s) 207, 495, 853, 896
MflI RGATCY 2 cut(s) 661, 787
MhlI GDGCHC 2 cut(s) 144, 977
MlsI TGGCCA 1 cut(s) 278
MluCI AATT 5 cut(s) 477, 774, 801, 930, 1074
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 2 cut(s) 1019, 1040
MmeI TCCRAC 1 cut(s) 414
Mox20I TGGCCA 1 cut(s) 278
Mph1103I ATGCAT 1 cut(s) 927
MroI TCCGGA 2 cut(s) 92, 684
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 2 cut(s) 189, 680
MscI TGGCCA 1 cut(s) 278
MseI TTAA 1 cut(s) 1078
MslI CAYNNNNRTG 2 cut(s) 38, 284
Msp20I TGGCCA 1 cut(s) 278
MspA1I CMGCKG 2 cut(s) 956, 1056
MspI CCGG 4 cut(s) 29, 64, 93, 685
MspR9I CCNGG 2 cut(s) 112, 136
Mva1269I GAATGC 1 cut(s) 807
MvaI CCWGG 2 cut(s) 112, 136
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 49, 554
NaeI GCCGGC 1 cut(s) 30
NcoI CCATGG 1 cut(s) 33
NdeII GATC 4 cut(s) 4, 661, 787, 892
NgoMIV GCCGGC 1 cut(s) 28
NlaIII CATG 8 cut(s) 37, 52, 404, 615, 752, 925, 985, 1003
NlaIV GGNNCC 4 cut(s) 91, 227, 663, 961
NmuCI GTSAC 1 cut(s) 416
NsiI ATGCAT 1 cut(s) 927
NspV TTCGAA 1 cut(s) 193
PagI TCATGA 1 cut(s) 748
PciSI GCTCTTC 1 cut(s) 879
PctI GAATGC 1 cut(s) 807
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 2 cut(s) 189, 680
PfeI GAWTC 2 cut(s) 243, 844
PinAI ACCGGT 1 cut(s) 63
PkrI GCNGC 4 cut(s) 170, 796, 955, 1055
PleI GAGTC 2 cut(s) 1019, 1039
PpsI GAGTC 2 cut(s) 1019, 1039
Psp124BI GAGCTC 1 cut(s) 144
Psp6I CCWGG 2 cut(s) 110, 134
PspEI GGTNACC 1 cut(s) 619
PspGI CCWGG 2 cut(s) 110, 134
PspN4I GGNNCC 4 cut(s) 91, 227, 663, 961
PspPI GGNCC 3 cut(s) 26, 90, 355
PstNI CAGNNNCTG 3 cut(s) 734, 791, 1034
PsuI RGATCY 2 cut(s) 661, 787
RigI GGCCGGCC 1 cut(s) 32
RsaI GTAC 4 cut(s) 158, 494, 980, 1070
RsaNI GTAC 4 cut(s) 157, 493, 979, 1069
RseI CAYNNNNRTG 2 cut(s) 38, 284
SacI GAGCTC 1 cut(s) 144
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 1 cut(s) 1078
SatI GCNGC 4 cut(s) 169, 795, 954, 1054
Sau3AI GATC 4 cut(s) 4, 661, 787, 892
Sau96I GGNCC 3 cut(s) 26, 90, 355
SchI GAGTC 2 cut(s) 1019, 1040
ScrFI CCNGG 2 cut(s) 112, 136
SduI GDGCHC 2 cut(s) 144, 977
SetI ASST 7 cut(s) 144, 218, 255, 466, 626, 765, 996
SfaNI GCATC 1 cut(s) 624
SfuI TTCGAA 1 cut(s) 193
SinI GGWCC 1 cut(s) 90
SmiMI CAYNNNNRTG 2 cut(s) 38, 284
Sse9I AATT 5 cut(s) 477, 774, 801, 930, 1074
SsiI CCGC 5 cut(s) 168, 337, 358, 956, 1056
SspMI CTAG 1 cut(s) 758
SstI GAGCTC 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 110, 134
StyI CCWWGG 2 cut(s) 33, 964
TaaI ACNGT 3 cut(s) 22, 535, 736
TaqI TCGA 4 cut(s) 162, 193, 657, 770
TasI AATT 5 cut(s) 477, 774, 801, 930, 1074
TatI WGTACW 1 cut(s) 156
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 2 cut(s) 243, 844
Tru1I TTAA 1 cut(s) 1078
Tru9I TTAA 1 cut(s) 1078
TscAI CASTG 2 cut(s) 349, 513
TseFI GTSAC 1 cut(s) 416
TseI GCWGC 3 cut(s) 794, 953, 1053
Tsp45I GTSAC 1 cut(s) 416
TspDTI ATGAA 4 cut(s) 198, 503, 684, 765
TspGWI ACGGA 2 cut(s) 137, 603
TspRI CASTG 2 cut(s) 349, 513
VpaK11BI GGWCC 1 cut(s) 90
XapI RAATTY 2 cut(s) 477, 774
XbaI TCTAGA 1 cut(s) 757
XmnI GAANNNNTTC 2 cut(s) 189, 680
XspI CTAG 1 cut(s) 758
Zsp2I ATGCAT 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.