Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0007752

Physical Location & Seq

Genomic Coordinates Reverse (-)

31435259 .. 31448031

Gene Structure 12773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1260800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGCGACCACGCCAGCACTGACGCTTCATCTCTCTCGCCTCGCCCGCCACTTCCCTTTCTCCTCTTCTTCTCTCCCGACTCCTCCTCTCTTTCCTCGTGCTCGACTCATTCTAAGGCCGCGTGACCTTCCCTTCCGCCGCACCTGTTCCTTCTCCATCTGCAACTTTTCCCGCCGATTCTCTGTCTCCGCCTCGACCACTCCAGGTCTAAGTGATGATGGGCTACATGATGAAAGATATGATGTCATTGTGGTCGGAGGAGGACATGCAGGCTGTGAAGCTGCCATAGCATCTGCTCATTTAGGGGCGAAAACTCTTCTACTCACCCTAAATATTGATAGAATTGCTTGGCAGCCCTGCAACCCAGCAGTTGGTGGACCAGCAAAGTCTCAACTTGTACACGAAGTGGATGCCCTTGGTGGTGAAATCGGGAAGATTTCTGATCGGTGCTATTTACAGAAGCGTGTACTCAATGCCTCAAGGGGCCCTGCTGTTCGGGCATTGCGTGCACAGACTGATAAAAGGGAATATGCTATGGAAATGAGAAAAATAGTAGAGAGCACACCAAACCTTTCAATTCGAGAGGCAATGGTGACAGATATCTTATTAGGAAAGAATGACAATATTGAAGGTGTGCAAACATTTTTTGGGATGAACTTCTACGCTCCTTCAGTTATTCTCACGACAGGCACATTTATGAGTGGTAAAATTTGGGTTGGTAGAACTTCTATGCCTGCAGGAAGAGCTGGCGAATCAGCTTCACTCGGACTGACTGAAAATTTACAGCGCCTTGGATTTGAAACTGATCGATTAAAGACTGGAACCCCAGCACGTGTGGACCGTCGCACTGTTGATTTTTCTGGATTGGAACCACAACATGGCGATGAAGAGGTCGGCTGGTTTAGTTTTGATCTTGATGTCCATATTGAAAGGGAACAAATGTGCTGCTATCTTACGCGTACTACAAAGAGCACTCACCAACTAATCAAAGACAACTTGCATGAAACTCCCACTTATGGAGGATGGGTTGAGGCGAAGGGGCCTAGGTATTGCCCTTCAATTGAAGACAAGATTGTTCGGTTCCAGGATAAAGAGTCTCATCAAATTTTTCTTGAACCAGAGGGCCGAGATGTGCCGGAGCTTTATGTGCAGGGATTCTCAACTGGTTTACCAGAGAGACTACAGTTACCACTCTTGAGGACTTTGCCTGGGCTTGAAAATTGTTCAATGCTGAGGCCTGCTTATGCTGTAGAATATGACTTCTTGCCTGCTCATCAATGTTCTCGGTCTCTTATGACAAAGAAAATTGATGGGCTTTTCTTCTCTGGTCAAATAAATGGGACTACAGGCTATGAGGAGGCTGCAGCACAAGGCATTATTTCTGGTATCAATGCTGCCAGACATTCAGATGGCAAGTCCCTCATTGTTCTTGAGAGAGAAAGCAGCTATATAGGAACATTGATCGATGATCTGGTCACAAAAGACCTTCGAGAGCCTTACCGCATGCTAACCAGTCGATCAGAGCACCGGTTACTTCTCCGATCTGATAATGCTGACAGCCGTCTCACACCATTGGGGCGTGACATTGGGTTAATAGATGATAGACGATGGAAACTATACCAGGACAAACAGGCTCGAATTTCAGAAGAAAAGAAGCGATTGAAAAGTGTCAGAATTTCAGGAGGGGAAATAGCAGCTGATGTTACTCGTCTTTCTAGTCAGCCATTGAAGGACTTTACAACTTTGGAGAGTCTTCTGAAGAAACCACACATAGAATATAAAGTTCTTGATAAGCATGGTTTTGGGAATGAACTGTTGTCTAGAATAGAAAAAGAATGTGTGGAGATTGACATCAAGTATGCGGGCTTCATTCAGCGACAACAGAGCCAACTCCAACAAATGGTCCATCAACAGCATAGATTACTTCCAGAGGACTTAGATTACTATTCAATAACAACTTTATCTCTTGAATCACGCGAGAAGCTCTCCAAGGTGAGGCCACAGACCGTTGGTCAAGCCAGCAGAGTTGGTGGGGTGAGCCCTGCCGATATCACTGCTCTCCTCATTATCCTTGAAGCTAATAAGAGGAGAGCACATGAACAGAAGAAGCTTGAACTGCTAAATTCTATCAAGATGGATACAGAACAAGGTGTATCTGAATTGCCATTTACTGGGACACTCAGGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001510 GO:0002097 GO:0002098 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0071704 GO:0090304 GO:0097159 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDA GIDA_assoc

Protein Analysis

730

Amino Acids

81.59

Weight (kDa)

8.47

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDA	PF01134	81 - 472	3.9e-156	Glucose inhibited division protein A
FAD_oxidored	PF12831	81 - 109	4.1e-06	FAD dependent oxidoreductase
GIDA_C_1st	PF21680	534 - 628	9.6e-21	tRNA modifying enzyme MnmG/GidA C-terminal helical domain
SAM_GIDA_C	PF13932	633 - 688	1.2e-21	tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13440
fragaria_vesca	FvH4_7g05150
malus_domestica	MD02G1260800.v1.1 MD07G1060500.v1.1 MD07G1060700.v1.1
prunus_persica	Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1
pyrus_communis	pycom02g22270 pycom07g04640 pycom07g04650
rosa_chinensis	RchiOBHm_Chr1g0331701
rosa_laevigata	RLG00000029721
rosa_multiflora	Rmu_sc0004723.1_g000011 Rmu_sc0005044.1_g000002
rosa_roxburghii	Rroxscaffold_4G00318890
rosa_rugosa	Rorug01G0095700
rosa_samantha	Rh1AG119400 Rh1BG090900 Rh1CG114500 Rh1DG124900
rosa_wichuraiana	Rw1G009650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2182
AccB7I	CCANNNNNTGG	4 cut(s)	371, 878, 1900, 2171
AccII	CGCG	3 cut(s)	121, 958, 1977
AciI	CCGC	8 cut(s)	46, 119, 136, 139, 172, 189, 1501, 1862
AcsI	RAATTY	6 cut(s)	708, 778, 1104, 1638, 1674, 2122
AcuI	CTGAAG	2 cut(s)	654, 1778
AcvI	CACGTG	1 cut(s)	833
AdeI	CACNNNGTG	1 cut(s)	406
AfaI	GTAC	3 cut(s)	399, 468, 961
AfiI	CCNNNNNNNGG	6 cut(s)	371, 878, 1016, 1900, 1995, 2171
AflIII	ACRYGT	2 cut(s)	832, 956
AgeI	ACCGGT	1 cut(s)	1527
AhdI	GACNNNNNGTC	1 cut(s)	2010
AjnI	CCWGG	4 cut(s)	202, 1083, 1207, 1620
AluBI	AGCT	9 cut(s)	281, 746, 758, 1141, 1446, 1697, 1984, 2078, 2110
AluI	AGCT	9 cut(s)	281, 746, 758, 1141, 1446, 1697, 1984, 2078, 2110
Alw21I	GWGCWC	6 cut(s)	103, 511, 563, 974, 1527, 2095
Alw26I	GTCTC	6 cut(s)	190, 393, 1101, 1171, 1293, 1568
Alw44I	GTGCAC	1 cut(s)	507
AoxI	GGCC	6 cut(s)	116, 484, 1040, 1123, 1235, 1997
ApaI	GGGCCC	1 cut(s)	488
ApaLI	GTGCAC	1 cut(s)	507
ApeKI	GCWGC	8 cut(s)	281, 352, 945, 1361, 1364, 1394, 1443, 1694
ApoI	RAATTY	6 cut(s)	708, 778, 1104, 1638, 1674, 2122
AsiGI	ACCGGT	1 cut(s)	1527
AspA2I	CCTAGG	1 cut(s)	1043
AspLEI	GCGC	1 cut(s)	789
AspS9I	GGNCC	7 cut(s)	377, 484, 485, 838, 1040, 1123, 1903
AsuHPI	GGTGA	6 cut(s)	316, 434, 604, 968, 2005, 2047
AvaII	GGWCC	3 cut(s)	377, 838, 1903
AvrII	CCTAGG	1 cut(s)	1043
BaeGI	GKGCMC	2 cut(s)	488, 511
BanII	GRGCYC	2 cut(s)	488, 2042
BarI	GAAGNNNNNNTAC	2 cut(s)	1850, 1882
BauI	CACGAG	1 cut(s)	96
BbrPI	CACGTG	1 cut(s)	833
BbsI	GAAGAC	2 cut(s)	1071, 1745
Bbv12I	GWGCWC	6 cut(s)	103, 511, 563, 974, 1527, 2095
BbvCI	CCTCAGC	1 cut(s)	1232
BbvI	GCAGC	8 cut(s)	268, 364, 932, 1348, 1376, 1381, 1455, 1706
BccI	CCATC	8 cut(s)	164, 212, 1017, 1304, 1403, 1602, 1914, 2128
BceAI	ACGGC	1 cut(s)	1545
BcgI	CGANNNNNNTGC	4 cut(s)	392, 426, 2036, 2070
BciT130I	CCWGG	4 cut(s)	204, 1085, 1209, 1622
BciVI	GTATCC	1 cut(s)	2131
BcoDI	GTCTC	6 cut(s)	190, 393, 1101, 1171, 1293, 1568
BfaI	CTAG	3 cut(s)	1044, 1716, 1821
BfmI	CTRYAG	5 cut(s)	735, 1181, 1248, 1344, 1362
BfoI	RGCGCY	1 cut(s)	790
BfuI	GTATCC	1 cut(s)	2131
BlnI	CCTAGG	1 cut(s)	1043
Bme1390I	CCNGG	4 cut(s)	204, 1085, 1209, 1622
Bme18I	GGWCC	3 cut(s)	377, 838, 1903
BmeRI	GACNNNNNGTC	1 cut(s)	2010
BmgT120I	GGNCC	7 cut(s)	377, 484, 485, 838, 1040, 1123, 1903
BmiI	GGNNCC	6 cut(s)	485, 486, 823, 870, 1041, 1082
BmrFI	CCNGG	4 cut(s)	204, 1085, 1209, 1622
BmrI	ACTGGG	1 cut(s)	2181
BmsI	GCATC	2 cut(s)	299, 400
BmuI	ACTGGG	1 cut(s)	2181
BoxI	GACNNNNGTC	1 cut(s)	1560
BpiI	GAAGAC	2 cut(s)	1071, 1745
BplI	GAGNNNNNCTC	2 cut(s)	1970, 2002
BpmI	CTGGAG	1 cut(s)	186
Bpu10I	CCTNAGC	1 cut(s)	1232
BpuEI	CTTGAG	3 cut(s)	463, 1216, 1451
Bsa29I	ATCGAT	2 cut(s)	808, 1464
BsaAI	YACGTR	1 cut(s)	833
BsaBI	GATNNNNATC	1 cut(s)	1850
BsaI	GGTCTC	1 cut(s)	1293
BsaJI	CCNNGG	5 cut(s)	415, 790, 1043, 1208, 1989
BsaWI	WCCGGW	1 cut(s)	1527
BsaXI	ACNNNNNCTCC	2 cut(s)	1011, 1041
Bsc4I	CCNNNNNNNGG	6 cut(s)	371, 878, 1016, 1900, 1995, 2171
Bse118I	RCCGGY	1 cut(s)	1527
Bse1I	ACTGG	4 cut(s)	823, 1168, 1512, 2176
Bse3DI	GCAATG	2 cut(s)	500, 594
Bse8I	GATNNNNATC	1 cut(s)	1850
BseBI	CCWGG	4 cut(s)	204, 1085, 1209, 1622
BseCI	ATCGAT	2 cut(s)	808, 1464
BseDI	CCNNGG	5 cut(s)	415, 790, 1043, 1208, 1989
BseGI	GGATG	3 cut(s)	415, 657, 1028
BseJI	GATNNNNATC	1 cut(s)	1850
BseLI	CCNNNNNNNGG	6 cut(s)	371, 878, 1016, 1900, 1995, 2171
BseMI	GCAATG	2 cut(s)	500, 594
BseMII	CTCAG	1 cut(s)	1223
BseNI	ACTGG	4 cut(s)	823, 1168, 1512, 2176
BseRI	GAGGAG	7 cut(s)	52, 72, 75, 273, 1370, 2051, 2101
BseSI	GKGCMC	2 cut(s)	488, 511
BseXI	GCAGC	8 cut(s)	268, 364, 932, 1348, 1376, 1381, 1455, 1706
BseYI	CCCAGC	2 cut(s)	364, 826
BsgI	GTGCAG	1 cut(s)	1169
Bsh1236I	CGCG	3 cut(s)	121, 958, 1977
BshFI	GGCC	6 cut(s)	118, 486, 1042, 1125, 1237, 1999
BshTI	ACCGGT	1 cut(s)	1527
BshVI	ATCGAT	2 cut(s)	808, 1464
BsiHKAI	GWGCWC	6 cut(s)	103, 511, 563, 974, 1527, 2095
BsiSI	CCGG	2 cut(s)	1136, 1528
BslFI	GGGAC	2 cut(s)	1354, 1402
BslI	CCNNNNNNNGG	6 cut(s)	371, 878, 1016, 1900, 1995, 2171
BsmAI	GTCTC	6 cut(s)	190, 393, 1101, 1171, 1293, 1568
BsmBI	CGTCTC	1 cut(s)	1568
BsmFI	GGGAC	2 cut(s)	1354, 1402
BsnI	GGCC	6 cut(s)	118, 486, 1042, 1125, 1237, 1999
Bso31I	GGTCTC	1 cut(s)	1293
Bsp120I	GGGCCC	1 cut(s)	484
Bsp1286I	GDGCHC	8 cut(s)	103, 488, 511, 563, 974, 1527, 2042, 2095
Bsp1407I	TGTACA	1 cut(s)	397
Bsp143I	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
BspACI	CCGC	8 cut(s)	46, 119, 136, 139, 172, 189, 1501, 1862
BspANI	GGCC	6 cut(s)	118, 486, 1042, 1125, 1237, 1999
BspCNI	CTCAG	1 cut(s)	1224
BspDI	ATCGAT	2 cut(s)	808, 1464
BspFNI	CGCG	3 cut(s)	121, 958, 1977
BspHI	TCATGA	1 cut(s)	2186
BspLI	GGNNCC	6 cut(s)	485, 486, 823, 870, 1041, 1082
BspMAI	CTGCAG	2 cut(s)	739, 1366
BspQI	GCTCTTC	1 cut(s)	736
BspTNI	GGTCTC	1 cut(s)	1293
BsrDI	GCAATG	2 cut(s)	500, 594
BsrFI	RCCGGY	1 cut(s)	1527
BsrGI	TGTACA	1 cut(s)	397
BsrI	ACTGG	4 cut(s)	823, 1168, 1512, 2176
BssAI	RCCGGY	1 cut(s)	1527
BssECI	CCNNGG	5 cut(s)	415, 790, 1043, 1208, 1989
BssMI	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
BssSI	CACGAG	1 cut(s)	96
BssT1I	CCWWGG	4 cut(s)	415, 790, 1043, 1989
Bst2BI	CACGAG	1 cut(s)	96
Bst2UI	CCWGG	4 cut(s)	204, 1085, 1209, 1622
Bst4CI	ACNGT	5 cut(s)	842, 850, 1185, 1815, 2008
Bst6I	CTCTTC	4 cut(s)	70, 321, 736, 882
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstAUI	TGTACA	1 cut(s)	397
BstBAI	YACGTR	1 cut(s)	833
BstDEI	CTNAG	5 cut(s)	113, 209, 1232, 1936, 2180
BstF5I	GGATG	3 cut(s)	415, 657, 1028
BstFNI	CGCG	3 cut(s)	121, 958, 1977
BstH2I	RGCGCY	1 cut(s)	790
BstHHI	GCGC	1 cut(s)	789
BstKTI	GATC	7 cut(s)	445, 808, 913, 1464, 1471, 1520, 1544
BstMAI	GTCTC	6 cut(s)	190, 393, 1101, 1171, 1293, 1568
BstMBI	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
BstMWI	GCNNNNNNNGC	7 cut(s)	45, 287, 497, 506, 743, 1147, 2116
BstNI	CCWGG	4 cut(s)	204, 1085, 1209, 1622
BstNSI	RCATGY	2 cut(s)	269, 1507
BstPAI	GACNNNNGTC	1 cut(s)	1560
BstSCI	CCNGG	4 cut(s)	202, 1083, 1207, 1620
BstSFI	CTRYAG	5 cut(s)	735, 1181, 1248, 1344, 1362
BstSLI	GKGCMC	2 cut(s)	488, 511
BstUI	CGCG	3 cut(s)	121, 958, 1977
BstV1I	GCAGC	8 cut(s)	268, 364, 932, 1348, 1376, 1381, 1455, 1706
BstV2I	GAAGAC	2 cut(s)	1071, 1745
Bsu15I	ATCGAT	2 cut(s)	808, 1464
BsuI	GTATCC	1 cut(s)	2131
BsuRI	GGCC	6 cut(s)	118, 486, 1042, 1125, 1237, 1999
BsuTUI	ATCGAT	2 cut(s)	808, 1464
BtgZI	GCGATG	1 cut(s)	897
BtsCI	GGATG	3 cut(s)	415, 657, 1028
BtsI	GCAGTG	1 cut(s)	2052
BtsIMutI	CAGTG	3 cut(s)	17, 846, 2052
CciI	TCATGA	1 cut(s)	2186
CfoI	GCGC	1 cut(s)	789
Cfr10I	RCCGGY	1 cut(s)	1527
Cfr13I	GGNCC	7 cut(s)	377, 484, 485, 838, 1040, 1123, 1903
ClaI	ATCGAT	2 cut(s)	808, 1464
CseI	GACGC	1 cut(s)	31
Csp6I	GTAC	3 cut(s)	398, 467, 960
CspAI	ACCGGT	1 cut(s)	1527
CviAII	CATG	8 cut(s)	227, 266, 878, 1001, 1504, 1796, 2096, 2187
CviQI	GTAC	3 cut(s)	398, 467, 960
DdeI	CTNAG	5 cut(s)	113, 209, 1232, 1936, 2180
DpnI	GATC	7 cut(s)	444, 807, 912, 1463, 1470, 1519, 1543
DpnII	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
DraIII	CACNNNGTG	1 cut(s)	406
DrdI	GACNNNNNNGTC	1 cut(s)	2182
DriI	GACNNNNNGTC	1 cut(s)	2010
DseDI	GACNNNNNNGTC	1 cut(s)	2182
Eam1104I	CTCTTC	4 cut(s)	70, 321, 736, 882
Eam1105I	GACNNNNNGTC	1 cut(s)	2010
EarI	CTCTTC	4 cut(s)	70, 321, 736, 882
EciI	GGCGGA	2 cut(s)	125, 178
Eco130I	CCWWGG	4 cut(s)	415, 790, 1043, 1989
Eco147I	AGGCCT	1 cut(s)	1237
Eco24I	GRGCYC	2 cut(s)	488, 2042
Eco31I	GGTCTC	1 cut(s)	1293
Eco32I	GATATC	2 cut(s)	601, 2050
Eco47I	GGWCC	3 cut(s)	377, 838, 1903
Eco57I	CTGAAG	2 cut(s)	654, 1778
Eco72I	CACGTG	1 cut(s)	833
EcoO109I	RGGNCCY	3 cut(s)	484, 485, 1040
EcoRII	CCWGG	4 cut(s)	202, 1083, 1207, 1620
EcoRV	GATATC	2 cut(s)	601, 2050
EcoT14I	CCWWGG	4 cut(s)	415, 790, 1043, 1989
EcoT38I	GRGCYC	2 cut(s)	488, 2042
ErhI	CCWWGG	4 cut(s)	415, 790, 1043, 1989
Esp3I	CGTCTC	1 cut(s)	1568
FaeI	CATG	8 cut(s)	230, 269, 881, 1004, 1507, 1799, 2099, 2190
FaqI	GGGAC	2 cut(s)	1354, 1402
FatI	CATG	8 cut(s)	226, 265, 877, 1000, 1503, 1795, 2095, 2186
FauI	CCCGC	3 cut(s)	53, 179, 1855
FokI	GGATG	3 cut(s)	422, 664, 1035
FriOI	GRGCYC	2 cut(s)	488, 2042
FspBI	CTAG	3 cut(s)	1044, 1716, 1821
GlaI	GCGC	1 cut(s)	788
GsaI	CCCAGC	2 cut(s)	368, 830
GsuI	CTGGAG	1 cut(s)	186
HaeII	RGCGCY	1 cut(s)	790
HaeIII	GGCC	6 cut(s)	118, 486, 1042, 1125, 1237, 1999
HapII	CCGG	2 cut(s)	1136, 1528
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	1 cut(s)	789
Hin1II	CATG	8 cut(s)	230, 269, 881, 1004, 1507, 1799, 2099, 2190
Hin6I	GCGC	1 cut(s)	787
HinP1I	GCGC	1 cut(s)	787
HindIII	AAGCTT	1 cut(s)	2108
HinfI	GANTC	8 cut(s)	79, 105, 177, 752, 1094, 1155, 1750, 1970
HpaII	CCGG	2 cut(s)	1136, 1528
HphI	GGTGA	6 cut(s)	316, 434, 604, 968, 2005, 2047
Hpy166II	GTNNAC	6 cut(s)	377, 400, 467, 509, 838, 1169
Hpy8I	GTNNAC	6 cut(s)	377, 400, 467, 509, 838, 1169
Hpy99I	CGWCG	1 cut(s)	846
HpyAV	CCTTC	9 cut(s)	137, 142, 160, 623, 678, 1030, 1065, 1496, 1723
HpyCH4III	ACNGT	5 cut(s)	842, 850, 1185, 1815, 2008
HpyCH4IV	ACGT	1 cut(s)	832
HpyCH4V	TGCA	9 cut(s)	162, 269, 360, 509, 637, 737, 1000, 1150, 1364
HpyF10VI	GCNNNNNNNGC	7 cut(s)	45, 287, 497, 506, 743, 1147, 2116
HpyF3I	CTNAG	5 cut(s)	113, 209, 1232, 1936, 2180
HpySE526I	ACGT	1 cut(s)	832
Hsp92II	CATG	8 cut(s)	230, 269, 881, 1004, 1507, 1799, 2099, 2190
HspAI	GCGC	1 cut(s)	787
Kzo9I	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
LguI	GCTCTTC	1 cut(s)	736
LmnI	GCTCC	2 cut(s)	670, 1138
Lsp1109I	GCAGC	8 cut(s)	268, 364, 932, 1348, 1376, 1381, 1455, 1706
LweI	GCATC	2 cut(s)	299, 400
MaeI	CTAG	3 cut(s)	1044, 1716, 1821
MaeII	ACGT	1 cut(s)	832
MaeIII	GTNAC	7 cut(s)	122, 592, 1185, 1474, 1530, 1580, 1702
MalI	GATC	7 cut(s)	444, 807, 912, 1463, 1470, 1519, 1543
MboI	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
MfeI	CAATTG	1 cut(s)	1059
MhlI	GDGCHC	8 cut(s)	103, 488, 511, 563, 974, 1527, 2042, 2095
MluI	ACGCGT	1 cut(s)	956
MlyI	GAGTC	4 cut(s)	73, 99, 1103, 1759
MmeI	TCCRAC	2 cut(s)	235, 1918
MseI	TTAA	2 cut(s)	812, 1592
MslI	CAYNNNNRTG	3 cut(s)	695, 882, 1407
MspA1I	CMGCKG	1 cut(s)	1697
MspI	CCGG	2 cut(s)	1136, 1528
MspR9I	CCNGG	4 cut(s)	204, 1085, 1209, 1622
MunI	CAATTG	1 cut(s)	1059
MvaI	CCWGG	4 cut(s)	204, 1085, 1209, 1622
MvnI	CGCG	3 cut(s)	121, 958, 1977
MwoI	GCNNNNNNNGC	7 cut(s)	45, 287, 497, 506, 743, 1147, 2116
NdeII	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
NlaIII	CATG	8 cut(s)	230, 269, 881, 1004, 1507, 1799, 2099, 2190
NlaIV	GGNNCC	6 cut(s)	485, 486, 823, 870, 1041, 1082
NmeAIII	GCCGAG	1 cut(s)	1151
NmuCI	GTSAC	4 cut(s)	122, 592, 1474, 1580
NspI	RCATGY	2 cut(s)	269, 1507
PaeI	GCATGC	1 cut(s)	1507
PagI	TCATGA	1 cut(s)	2186
PceI	AGGCCT	1 cut(s)	1237
PciSI	GCTCTTC	1 cut(s)	736
PcsI	WCGNNNNNNNCGW	2 cut(s)	502, 838
PfeI	GAWTC	4 cut(s)	177, 752, 1155, 1970
PflMI	CCANNNNNTGG	4 cut(s)	371, 878, 1900, 2171
PfoI	TCCNGGA	1 cut(s)	1083
PinAI	ACCGGT	1 cut(s)	1527
PleI	GAGTC	4 cut(s)	73, 99, 1102, 1758
PmaCI	CACGTG	1 cut(s)	833
PmlI	CACGTG	1 cut(s)	833
PpsI	GAGTC	4 cut(s)	73, 99, 1102, 1758
Ppu21I	YACGTR	1 cut(s)	833
PshAI	GACNNNNGTC	1 cut(s)	1560
Psp6I	CCWGG	4 cut(s)	202, 1083, 1207, 1620
PspCI	CACGTG	1 cut(s)	833
PspFI	CCCAGC	2 cut(s)	364, 826
PspGI	CCWGG	4 cut(s)	202, 1083, 1207, 1620
PspN4I	GGNNCC	6 cut(s)	485, 486, 823, 870, 1041, 1082
PspOMI	GGGCCC	1 cut(s)	484
PspPI	GGNCC	7 cut(s)	377, 484, 485, 838, 1040, 1123, 1903
PstI	CTGCAG	2 cut(s)	739, 1366
PvuII	CAGCTG	1 cut(s)	1697
RsaI	GTAC	3 cut(s)	399, 468, 961
RsaNI	GTAC	3 cut(s)	398, 467, 960
RseI	CAYNNNNRTG	3 cut(s)	695, 882, 1407
SapI	GCTCTTC	1 cut(s)	736
SaqAI	TTAA	2 cut(s)	812, 1592
Sau3AI	GATC	7 cut(s)	442, 805, 910, 1461, 1468, 1517, 1541
Sau96I	GGNCC	7 cut(s)	377, 484, 485, 838, 1040, 1123, 1903
SbfI	CCTGCAGG	1 cut(s)	739
SchI	GAGTC	4 cut(s)	73, 99, 1103, 1759
ScrFI	CCNGG	4 cut(s)	204, 1085, 1209, 1622
SdaI	CCTGCAGG	1 cut(s)	739
SduI	GDGCHC	8 cut(s)	103, 488, 511, 563, 974, 1527, 2042, 2095
SfaNI	GCATC	2 cut(s)	299, 400
SfcI	CTRYAG	5 cut(s)	735, 1181, 1248, 1344, 1362
SinI	GGWCC	3 cut(s)	377, 838, 1903
SmiMI	CAYNNNNRTG	3 cut(s)	695, 882, 1407
SmlI	CTYRAG	3 cut(s)	478, 1195, 1430
SmoI	CTYRAG	3 cut(s)	478, 1195, 1430
SphI	GCATGC	1 cut(s)	1507
Sse8387I	CCTGCAGG	1 cut(s)	739
SseBI	AGGCCT	1 cut(s)	1237
SsiI	CCGC	8 cut(s)	46, 119, 136, 139, 172, 189, 1501, 1862
SspI	AATATT	2 cut(s)	334, 625
SspMI	CTAG	3 cut(s)	1044, 1716, 1821
StuI	AGGCCT	1 cut(s)	1237
StyD4I	CCNGG	4 cut(s)	202, 1083, 1207, 1620
StyI	CCWWGG	4 cut(s)	415, 790, 1043, 1989
TaaI	ACNGT	5 cut(s)	842, 850, 1185, 1815, 2008
TaiI	ACGT	1 cut(s)	835
TaqI	TCGA	8 cut(s)	103, 194, 580, 808, 1464, 1489, 1516, 1636
TaqII	GACCGA	1 cut(s)	1275
TatI	WGTACW	2 cut(s)	397, 466
TauI	GCSGC	2 cut(s)	121, 141
TfiI	GAWTC	4 cut(s)	177, 752, 1155, 1970
Tru1I	TTAA	2 cut(s)	812, 1592
Tru9I	TTAA	2 cut(s)	812, 1592
TscAI	CASTG	3 cut(s)	24, 853, 2059
TseFI	GTSAC	4 cut(s)	122, 592, 1474, 1580
TseI	GCWGC	8 cut(s)	281, 352, 945, 1361, 1364, 1394, 1443, 1694
Tsp45I	GTSAC	4 cut(s)	122, 592, 1474, 1580
TspDTI	ATGAA	8 cut(s)	17, 246, 668, 900, 1017, 1824, 1858, 2112
TspRI	CASTG	3 cut(s)	24, 853, 2059
Van91I	CCANNNNNTGG	4 cut(s)	371, 878, 1900, 2171
VneI	GTGCAC	1 cut(s)	507
VpaK11BI	GGWCC	3 cut(s)	377, 838, 1903
XapI	RAATTY	6 cut(s)	708, 778, 1104, 1638, 1674, 2122
XbaI	TCTAGA	1 cut(s)	1820
XceI	RCATGY	2 cut(s)	269, 1507
XmaJI	CCTAGG	1 cut(s)	1043
XspI	CTAG	3 cut(s)	1044, 1716, 1821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.