Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0007752

Physical Location & Seq

Genomic Coordinates Reverse (-)

23025271 .. 23039779

Gene Structure 14509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG114500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGCAACTCCAGCACTGACGCTTCATCTCTCCCGCGTCGCTCGCCACTCGCCTTTCTCTTCTCCGTTGTTCAAACCTGTTCTCTATCCTTGTGCTCGTGTCGTTCCCAAGCTGCCTTTCCGCCGCAGGGTTGGCTTCAGCTTCAACCTCTCCCGGCGATTCACCGTTGCCGCCTCAATATCTCCAGACTTGAGTAATACTGGGAATCATGGACTAGATGATGAAAGATATGATGTCATTGTGGTTGGAGGAGGACATGCAGGCTGTGAAGCTGCCCTAGCATCTGCCCGTTTAGGGGCAAGAACTCTTCTCCTCACACTGAATATTGATAGAATTGCATGGCAGCCTTGCAACCCAGCAGTAGGCGGACCAGCAAAATCACAACTTGTGCATGAAGTCGATGCTCTTGGTGGGGAAATTGGGAAGATTGCTGATAGGTGCTATTTACAAAAGCGTATTCTAAATACCTCAAGGGGCCCTGCTGTTCGAGCATTGCGTGCACAAACCGATAAACGGGAATATGCTATGCAAATGAGAGAAATTGTAGAGAGTGCTCCAAACCTTTCAATTAGGGAGGCAATGGTAACAGATATCTTATTAGGAAAGAATGACGACATAGAAGGTGTACGAACATTTTTTGGGATGAACTTCTATGCTCCTTCTGTCATCCTCACGACAGGCACATTTATGAGTGGTAAAATTTGGGTTGGTAGAACTTCTATGCCTGCAGGAAGAGCTGGGGAATCAGCTTCACTTGGACTCACTGAGAACTTACAGAGACTTGGATTCGAAACTGACCGATTAAAGACTGGAACTCCAGCACGTGTTGACCGCCGCACTGTTGATTATTCTGGATTGGAACCACAACATGGTGACGAAGAGGTTGGCTGGTTTAGTTTTGATCTTGATTTCCATGTTGAAAGGGAACAAATGTGCTGCTATCTAACTCGTACCACAAAGAGCACTCACCAACTAATCAGAGAGAACTTGCATGAAACTCCCACTTATGGAGGATGGGTTGAGGCGAAGGGGCCTAGGTATTGTCCTTCAATTGAAGATAAGATTGTCCGGTTTAAGGATAAAGAATCGCATCAAATTTTTCTTGAACCAGAGGGTCGAAATGTGCCTGAGCTTTATGTGCAGGGTTTCTCAACTGGCTTACCAGAGAGACTACAATTACCACTCTTGAGGACATTACCTGGACTTGAAAACTGTTCAATGCTGAGGCCTGCTTATGCTGTAGAGTATGATTACTTGCCTGCTCATCAATGTTCTCGCTCTCTTATGACAAAGAAAATTGGTGGGCTTTTCTTTTCTGGTCAAATAAATGGAACTACGGGCTATGAAGAGGCTGCAGCCCAGGGCATTGTTTCTGGTATTAATGCTGCTAGGCACGCAGATGGTAAGTCTCTCATTGTTTTTGAGAGAGAAAGCAGCTATATAGGCACATTAATTGATGATCTGGTCACAAAGGACCTTCGAGAGCCTTACCGCATGTTAACAAGCCGCTCTGAACACCGGCTACTTCTTCGATCCGACAACGCAGATAGTCGTCTGACCCCGTTGGGCCATGAAATTGGGTTAATAGATGATAGACGTTGGAAACTCTACCAAGACAAGCAAGCTCGAATTTCAGAAGAGAAAAAGCGATTAAAAAGTGTTCGAATTTCAGGGGGAGATCTGTCTGCTAATGTTACTAGCCTTTCAAGTCAGCCAGTGAAAGACTTTTCAACTCTGGAGAGTCTTCTTAAGAAACCACATGTAGAATATAAAGTTCTTGACAAGCATGGTTATGGGAATGAAATGTTGTCTAGAGTTGAAAAAGAATGCGTGGAGATTGACATCAAGTATGAGGGCTTCATTGTGCGCCAGCAGAACCAACTCCAACAGATGGTCCATCAACAACATAAACGACTTCCAGAGGACTTGGATTACAATGCGATAACAACATTGTCCCTTGAAGCACGCGAAAAACTCTCAAAGGTCCTTAATGTCTACAAGTCTTATAGGATCCTTCAGTTGGATTTGGGGCTGCTCAGTGAAACTGGGGTACGAAAGTACCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001510 GO:0002097 GO:0002098 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0071704 GO:0090304 GO:0097159 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDA GIDA_assoc

Protein Analysis

688

Amino Acids

77.31

Weight (kDa)

8.77

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDA	PF01134	78 - 469	5.8e-157	Glucose inhibited division protein A
FAD_oxidored	PF12831	78 - 106	1.4e-06	FAD dependent oxidoreductase
GIDA_C_1st	PF21680	531 - 625	3.6e-19	tRNA modifying enzyme MnmG/GidA C-terminal helical domain
SAM_GIDA_C	PF13932	630 - 662	4.4e-08	tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13440
fragaria_vesca	FvH4_7g05150
malus_domestica	MD02G1260800.v1.1 MD07G1060500.v1.1 MD07G1060700.v1.1
prunus_persica	Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1
pyrus_communis	pycom02g22270 pycom07g04640 pycom07g04650
rosa_chinensis	RchiOBHm_Chr1g0331701
rosa_laevigata	RLG00000029721
rosa_multiflora	Rmu_sc0004723.1_g000011 Rmu_sc0005044.1_g000002
rosa_roxburghii	Rroxscaffold_4G00318890
rosa_rugosa	Rorug01G0095700
rosa_samantha	Rh1AG119400 Rh1BG090900 Rh1CG114500 Rh1DG124900
rosa_wichuraiana	Rw1G009650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	869, 1891
AccBSI	CCGCTC	1 cut(s)	1509
AccI	GTMKAC	1 cut(s)	1995
AccII	CGCG	2 cut(s)	36, 1968
AciI	CCGC	9 cut(s)	34, 121, 124, 171, 366, 832, 835, 1492, 1507
AclWI	GGATC	3 cut(s)	1527, 2005, 2018
AcsI	RAATTY	4 cut(s)	699, 1095, 1629, 1665
AcuI	CTGAAG	2 cut(s)	121, 2000
AcvI	CACGTG	1 cut(s)	824
AfaI	GTAC	4 cut(s)	627, 952, 2052, 2060
AflII	CTTAAG	1 cut(s)	1748
AflIII	ACRYGT	2 cut(s)	823, 1759
AjnI	CCWGG	2 cut(s)	1198, 1359
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AluBI	AGCT	8 cut(s)	112, 141, 272, 737, 749, 1132, 1437, 1625
AluI	AGCT	8 cut(s)	112, 141, 272, 737, 749, 1132, 1437, 1625
Alw21I	GWGCWC	4 cut(s)	97, 502, 556, 965
Alw26I	GTCTC	3 cut(s)	772, 1162, 1413
Alw44I	GTGCAC	1 cut(s)	498
AlwI	GGATC	3 cut(s)	1527, 2005, 2018
AoxI	GGCC	4 cut(s)	475, 1031, 1226, 1567
ApaI	GGGCCC	1 cut(s)	479
ApaLI	GTGCAC	1 cut(s)	498
ApeKI	GCWGC	9 cut(s)	112, 272, 343, 936, 1352, 1355, 1385, 1434, 2032
ApoI	RAATTY	4 cut(s)	699, 1095, 1629, 1665
AseI	ATTAAT	2 cut(s)	1380, 1451
AspA2I	CCTAGG	1 cut(s)	1034
AspLEI	GCGC	1 cut(s)	1869
AspS9I	GGNCC	8 cut(s)	368, 475, 476, 1031, 1474, 1567, 1894, 1984
AsuC2I	CCSGG	1 cut(s)	154
AsuHPI	GGTGA	3 cut(s)	154, 884, 959
AsuII	TTCGAA	2 cut(s)	789, 1663
AvaII	GGWCC	4 cut(s)	368, 1474, 1894, 1984
AvrII	CCTAGG	1 cut(s)	1034
BaeGI	GKGCMC	2 cut(s)	479, 502
BaeI	ACNNNNGTAYC	2 cut(s)	2042, 2042
BamHI	GGATCC	1 cut(s)	2010
BanII	GRGCYC	1 cut(s)	479
BarI	GAAGNNNNNNTAC	2 cut(s)	1841, 1873
BauI	CACGAG	1 cut(s)	96
BbrPI	CACGTG	1 cut(s)	824
BbsI	GAAGAC	1 cut(s)	1736
Bbv12I	GWGCWC	4 cut(s)	97, 502, 556, 965
BbvCI	CCTCAGC	1 cut(s)	1223
BbvI	GCAGC	9 cut(s)	99, 259, 355, 923, 1339, 1367, 1372, 1446, 2019
BccI	CCATC	4 cut(s)	1008, 1394, 1885, 1905
BciT130I	CCWGG	2 cut(s)	1200, 1361
BcnI	CCSGG	1 cut(s)	154
BcoDI	GTCTC	3 cut(s)	772, 1162, 1413
BfaI	CTAG	7 cut(s)	215, 278, 1035, 1389, 1698, 1812, 2065
BfmI	CTRYAG	3 cut(s)	726, 1239, 1353
BfrI	CTTAAG	1 cut(s)	1748
BglII	AGATCT	1 cut(s)	1678
BlnI	CCTAGG	1 cut(s)	1034
Bme1390I	CCNGG	3 cut(s)	154, 1200, 1361
Bme18I	GGWCC	4 cut(s)	368, 1474, 1894, 1984
BmgT120I	GGNCC	8 cut(s)	368, 475, 476, 1031, 1474, 1567, 1894, 1984
BmiI	GGNNCC	5 cut(s)	476, 477, 861, 1032, 2012
BmrFI	CCNGG	3 cut(s)	154, 1200, 1361
BmrI	ACTGGG	2 cut(s)	210, 2055
BmsI	GCATC	3 cut(s)	290, 391, 1099
BmuI	ACTGGG	2 cut(s)	210, 2055
BpiI	GAAGAC	1 cut(s)	1736
BpmI	CTGGAG	3 cut(s)	168, 801, 1757
Bpu10I	CCTNAGC	2 cut(s)	1128, 1223
Bpu14I	TTCGAA	2 cut(s)	789, 1663
BpuEI	CTTGAG	3 cut(s)	211, 454, 1207
BpuMI	CCSGG	1 cut(s)	154
BsaAI	YACGTR	1 cut(s)	824
BsaBI	GATNNNNATC	1 cut(s)	1841
BsaJI	CCNNGG	3 cut(s)	1034, 1359, 1360
BsaWI	WCCGGW	1 cut(s)	1068
BsaXI	ACNNNNNCTCC	4 cut(s)	799, 829, 1002, 1032
Bse118I	RCCGGY	1 cut(s)	1518
Bse1I	ACTGG	5 cut(s)	205, 814, 1159, 1715, 2050
Bse3DI	GCAATG	2 cut(s)	491, 585
Bse8I	GATNNNNATC	1 cut(s)	1841
BseBI	CCWGG	2 cut(s)	1200, 1361
BseDI	CCNNGG	3 cut(s)	1034, 1359, 1360
BseGI	GGATG	3 cut(s)	648, 666, 1019
BseJI	GATNNNNATC	1 cut(s)	1841
BseMI	GCAATG	2 cut(s)	491, 585
BseMII	CTCAG	4 cut(s)	756, 1119, 1214, 2050
BseNI	ACTGG	5 cut(s)	205, 814, 1159, 1715, 2050
BseRI	GAGGAG	2 cut(s)	264, 302
BseSI	GKGCMC	2 cut(s)	479, 502
BseXI	GCAGC	9 cut(s)	99, 259, 355, 923, 1339, 1367, 1372, 1446, 2019
BseYI	CCCAGC	2 cut(s)	355, 737
BsgI	GTGCAG	1 cut(s)	1160
Bsh1236I	CGCG	2 cut(s)	36, 1968
BshFI	GGCC	4 cut(s)	477, 1033, 1228, 1569
BsiHKAI	GWGCWC	4 cut(s)	97, 502, 556, 965
BsiSI	CCGG	3 cut(s)	154, 1069, 1519
BslFI	GGGAC	1 cut(s)	1939
BsmAI	GTCTC	3 cut(s)	772, 1162, 1413
BsmFI	GGGAC	1 cut(s)	1939
BsmI	GAATGC	1 cut(s)	1832
BsnI	GGCC	4 cut(s)	477, 1033, 1228, 1569
Bsp119I	TTCGAA	2 cut(s)	789, 1663
Bsp120I	GGGCCC	1 cut(s)	475
Bsp1286I	GDGCHC	5 cut(s)	97, 479, 502, 556, 965
Bsp143I	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
BspACI	CCGC	9 cut(s)	34, 121, 124, 171, 366, 832, 835, 1492, 1507
BspANI	GGCC	4 cut(s)	477, 1033, 1228, 1569
BspCNI	CTCAG	4 cut(s)	757, 1120, 1215, 2049
BspFNI	CGCG	2 cut(s)	36, 1968
BspLI	GGNNCC	5 cut(s)	476, 477, 861, 1032, 2012
BspMAI	CTGCAG	2 cut(s)	730, 1357
BspPI	GGATC	3 cut(s)	1527, 2005, 2018
BspQI	GCTCTTC	1 cut(s)	727
BspT104I	TTCGAA	2 cut(s)	789, 1663
BspTI	CTTAAG	1 cut(s)	1748
BsrBI	CCGCTC	1 cut(s)	1509
BsrDI	GCAATG	2 cut(s)	491, 585
BsrFI	RCCGGY	1 cut(s)	1518
BsrI	ACTGG	5 cut(s)	205, 814, 1159, 1715, 2050
BssAI	RCCGGY	1 cut(s)	1518
BssECI	CCNNGG	3 cut(s)	1034, 1359, 1360
BssMI	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
BssSI	CACGAG	1 cut(s)	96
BssT1I	CCWWGG	1 cut(s)	1034
Bst2BI	CACGAG	1 cut(s)	96
Bst2UI	CCWGG	2 cut(s)	1200, 1361
Bst4CI	ACNGT	3 cut(s)	166, 841, 1214
Bst6I	CTCTTC	6 cut(s)	64, 312, 727, 873, 1341, 1632
BstAFI	CTTAAG	1 cut(s)	1748
BstAPI	GCANNNNNTGC	1 cut(s)	497
BstBAI	YACGTR	1 cut(s)	824
BstBI	TTCGAA	2 cut(s)	789, 1663
BstDEI	CTNAG	4 cut(s)	765, 1128, 1223, 2036
BstF5I	GGATG	3 cut(s)	648, 666, 1019
BstFNI	CGCG	2 cut(s)	36, 1968
BstHHI	GCGC	1 cut(s)	1869
BstKTI	GATC	5 cut(s)	904, 1462, 1535, 1681, 2013
BstMAI	GTCTC	3 cut(s)	772, 1162, 1413
BstMBI	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
BstNI	CCWGG	2 cut(s)	1200, 1361
BstNSI	RCATGY	3 cut(s)	260, 1498, 1763
BstSCI	CCNGG	3 cut(s)	152, 1198, 1359
BstSFI	CTRYAG	3 cut(s)	726, 1239, 1353
BstSLI	GKGCMC	2 cut(s)	479, 502
BstUI	CGCG	2 cut(s)	36, 1968
BstV1I	GCAGC	9 cut(s)	99, 259, 355, 923, 1339, 1367, 1372, 1446, 2019
BstV2I	GAAGAC	1 cut(s)	1736
BstX2I	RGATCY	2 cut(s)	1678, 2010
BstXI	CCANNNNNNTGG	1 cut(s)	1577
BstYI	RGATCY	2 cut(s)	1678, 2010
BsuRI	GGCC	4 cut(s)	477, 1033, 1228, 1569
BtsCI	GGATG	3 cut(s)	648, 666, 1019
BtsIMutI	CAGTG	6 cut(s)	14, 317, 762, 837, 1722, 2044
CfoI	GCGC	1 cut(s)	1869
Cfr10I	RCCGGY	1 cut(s)	1518
Cfr13I	GGNCC	8 cut(s)	368, 475, 476, 1031, 1474, 1567, 1894, 1984
CseI	GACGC	2 cut(s)	25, 28
Csp6I	GTAC	4 cut(s)	626, 951, 2051, 2059
CviQI	GTAC	4 cut(s)	626, 951, 2051, 2059
DdeI	CTNAG	4 cut(s)	765, 1128, 1223, 2036
DpnI	GATC	5 cut(s)	903, 1461, 1534, 1680, 2012
DpnII	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
Eam1104I	CTCTTC	6 cut(s)	64, 312, 727, 873, 1341, 1632
EarI	CTCTTC	6 cut(s)	64, 312, 727, 873, 1341, 1632
EciI	GGCGGA	2 cut(s)	110, 381
Eco130I	CCWWGG	1 cut(s)	1034
Eco147I	AGGCCT	1 cut(s)	1228
Eco24I	GRGCYC	1 cut(s)	479
Eco32I	GATATC	1 cut(s)	592
Eco47I	GGWCC	4 cut(s)	368, 1474, 1894, 1984
Eco57I	CTGAAG	2 cut(s)	121, 2000
Eco72I	CACGTG	1 cut(s)	824
EcoO109I	RGGNCCY	5 cut(s)	475, 476, 1031, 1474, 1984
EcoRII	CCWGG	2 cut(s)	1198, 1359
EcoRV	GATATC	1 cut(s)	592
EcoT14I	CCWWGG	1 cut(s)	1034
EcoT38I	GRGCYC	1 cut(s)	479
ErhI	CCWWGG	1 cut(s)	1034
FaqI	GGGAC	1 cut(s)	1939
FauI	CCCGC	1 cut(s)	41
FblI	GTMKAC	1 cut(s)	1995
FokI	GGATG	3 cut(s)	653, 655, 1026
FriOI	GRGCYC	1 cut(s)	479
FspBI	CTAG	7 cut(s)	215, 278, 1035, 1389, 1698, 1812, 2065
GlaI	GCGC	1 cut(s)	1868
GsaI	CCCAGC	2 cut(s)	359, 741
GsuI	CTGGAG	3 cut(s)	168, 801, 1757
HaeIII	GGCC	4 cut(s)	477, 1033, 1228, 1569
HapII	CCGG	3 cut(s)	154, 1069, 1519
HgaI	GACGC	2 cut(s)	25, 28
HhaI	GCGC	1 cut(s)	1869
Hin6I	GCGC	1 cut(s)	1867
HinP1I	GCGC	1 cut(s)	1867
HincII	GTYRAC	2 cut(s)	829, 1500
HindII	GTYRAC	2 cut(s)	829, 1500
HinfI	GANTC	7 cut(s)	159, 205, 743, 759, 786, 1085, 1741
HpaI	GTTAAC	1 cut(s)	1500
HpaII	CCGG	3 cut(s)	154, 1069, 1519
HphI	GGTGA	3 cut(s)	154, 884, 959
Hpy166II	GTNNAC	5 cut(s)	500, 626, 829, 1500, 1996
Hpy188I	TCNGA	5 cut(s)	980, 1513, 1537, 1557, 1636
Hpy8I	GTNNAC	5 cut(s)	500, 626, 829, 1500, 1996
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	6 cut(s)	614, 669, 1021, 1056, 1487, 2024
HpyCH4III	ACNGT	3 cut(s)	166, 841, 1214
HpyCH4IV	ACGT	2 cut(s)	823, 1597
HpyF3I	CTNAG	4 cut(s)	765, 1128, 1223, 2036
HpySE526I	ACGT	2 cut(s)	823, 1597
HspAI	GCGC	1 cut(s)	1867
KspAI	GTTAAC	1 cut(s)	1500
Kzo9I	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
LguI	GCTCTTC	1 cut(s)	727
LmnI	GCTCC	2 cut(s)	559, 661
Lsp1109I	GCAGC	9 cut(s)	99, 259, 355, 923, 1339, 1367, 1372, 1446, 2019
LweI	GCATC	3 cut(s)	290, 391, 1099
MaeI	CTAG	7 cut(s)	215, 278, 1035, 1389, 1698, 1812, 2065
MaeII	ACGT	2 cut(s)	823, 1597
MaeIII	GTNAC	4 cut(s)	583, 872, 1465, 1693
MalI	GATC	5 cut(s)	903, 1461, 1534, 1680, 2012
MbiI	CCGCTC	1 cut(s)	1509
MboI	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	2 cut(s)	1678, 2010
MhlI	GDGCHC	5 cut(s)	97, 479, 502, 556, 965
MlyI	GAGTC	2 cut(s)	753, 1750
MmeI	TCCRAC	5 cut(s)	226, 1560, 1580, 1909, 2001
MseI	TTAA	9 cut(s)	803, 1074, 1380, 1451, 1499, 1583, 1652, 1749, 1989
MslI	CAYNNNNRTG	3 cut(s)	686, 1398, 1791
MspCI	CTTAAG	1 cut(s)	1748
MspI	CCGG	3 cut(s)	154, 1069, 1519
MspR9I	CCNGG	3 cut(s)	154, 1200, 1361
MunI	CAATTG	1 cut(s)	1050
Mva1269I	GAATGC	1 cut(s)	1832
MvaI	CCWGG	2 cut(s)	1200, 1361
MvnI	CGCG	2 cut(s)	36, 1968
NciI	CCSGG	1 cut(s)	154
NdeII	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
NlaIV	GGNNCC	5 cut(s)	476, 477, 861, 1032, 2012
NmuCI	GTSAC	2 cut(s)	872, 1465
NspI	RCATGY	3 cut(s)	260, 1498, 1763
NspV	TTCGAA	2 cut(s)	789, 1663
PasI	CCCWGGG	1 cut(s)	1360
PceI	AGGCCT	1 cut(s)	1228
PciI	ACATGT	1 cut(s)	1759
PciSI	GCTCTTC	1 cut(s)	727
PcsI	WCGNNNNNNNCGW	1 cut(s)	493
PctI	GAATGC	1 cut(s)	1832
PfeI	GAWTC	5 cut(s)	159, 205, 743, 786, 1085
PflMI	CCANNNNNTGG	2 cut(s)	869, 1891
PleI	GAGTC	2 cut(s)	753, 1749
PmaCI	CACGTG	1 cut(s)	824
PmlI	CACGTG	1 cut(s)	824
PpsI	GAGTC	2 cut(s)	753, 1749
Ppu21I	YACGTR	1 cut(s)	824
PpuMI	RGGWCCY	2 cut(s)	1474, 1984
PscI	ACATGT	1 cut(s)	1759
PshBI	ATTAAT	2 cut(s)	1380, 1451
Psp5II	RGGWCCY	2 cut(s)	1474, 1984
Psp6I	CCWGG	2 cut(s)	1198, 1359
PspCI	CACGTG	1 cut(s)	824
PspFI	CCCAGC	2 cut(s)	355, 737
PspGI	CCWGG	2 cut(s)	1198, 1359
PspN4I	GGNNCC	5 cut(s)	476, 477, 861, 1032, 2012
PspOMI	GGGCCC	1 cut(s)	475
PspPI	GGNCC	8 cut(s)	368, 475, 476, 1031, 1474, 1567, 1894, 1984
PspPPI	RGGWCCY	2 cut(s)	1474, 1984
PsrI	GAACNNNNNNTAC	2 cut(s)	1506, 1538
PstI	CTGCAG	2 cut(s)	730, 1357
PsuI	RGATCY	2 cut(s)	1678, 2010
RsaI	GTAC	4 cut(s)	627, 952, 2052, 2060
RsaNI	GTAC	4 cut(s)	626, 951, 2051, 2059
RseI	CAYNNNNRTG	3 cut(s)	686, 1398, 1791
SapI	GCTCTTC	1 cut(s)	727
SaqAI	TTAA	9 cut(s)	803, 1074, 1380, 1451, 1499, 1583, 1652, 1749, 1989
Sau3AI	GATC	5 cut(s)	901, 1459, 1532, 1678, 2010
Sau96I	GGNCC	8 cut(s)	368, 475, 476, 1031, 1474, 1567, 1894, 1984
SbfI	CCTGCAGG	1 cut(s)	730
SchI	GAGTC	2 cut(s)	753, 1750
ScrFI	CCNGG	3 cut(s)	154, 1200, 1361
SdaI	CCTGCAGG	1 cut(s)	730
SduI	GDGCHC	5 cut(s)	97, 479, 502, 556, 965
SfaNI	GCATC	3 cut(s)	290, 391, 1099
SfcI	CTRYAG	3 cut(s)	726, 1239, 1353
SfuI	TTCGAA	2 cut(s)	789, 1663
SinI	GGWCC	4 cut(s)	368, 1474, 1894, 1984
SmiMI	CAYNNNNRTG	3 cut(s)	686, 1398, 1791
SmlI	CTYRAG	4 cut(s)	190, 469, 1186, 1748
SmoI	CTYRAG	4 cut(s)	190, 469, 1186, 1748
Sse8387I	CCTGCAGG	1 cut(s)	730
SseBI	AGGCCT	1 cut(s)	1228
SsiI	CCGC	9 cut(s)	34, 121, 124, 171, 366, 832, 835, 1492, 1507
SspI	AATATT	1 cut(s)	325
SspMI	CTAG	7 cut(s)	215, 278, 1035, 1389, 1698, 1812, 2065
StuI	AGGCCT	1 cut(s)	1228
StyD4I	CCNGG	3 cut(s)	152, 1198, 1359
StyI	CCWWGG	1 cut(s)	1034
TaaI	ACNGT	3 cut(s)	166, 841, 1214
TaiI	ACGT	2 cut(s)	826, 1600
TaqI	TCGA	8 cut(s)	399, 487, 789, 1117, 1480, 1531, 1627, 1663
TaqII	GACCGA	1 cut(s)	813
TauI	GCSGC	4 cut(s)	126, 173, 837, 1509
TfiI	GAWTC	5 cut(s)	159, 205, 743, 786, 1085
Tru1I	TTAA	9 cut(s)	803, 1074, 1380, 1451, 1499, 1583, 1652, 1749, 1989
Tru9I	TTAA	9 cut(s)	803, 1074, 1380, 1451, 1499, 1583, 1652, 1749, 1989
TscAI	CASTG	6 cut(s)	21, 324, 769, 844, 1722, 2044
TseFI	GTSAC	2 cut(s)	872, 1465
TseI	GCWGC	9 cut(s)	112, 272, 343, 936, 1352, 1355, 1385, 1434, 2032
Tsp45I	GTSAC	2 cut(s)	872, 1465
TspDTI	ATGAA	9 cut(s)	14, 237, 408, 659, 1008, 1359, 1587, 1815, 1849
TspGWI	ACGGA	1 cut(s)	54
TspRI	CASTG	6 cut(s)	21, 324, 769, 844, 1722, 2044
Van91I	CCANNNNNTGG	2 cut(s)	869, 1891
Vha464I	CTTAAG	1 cut(s)	1748
VneI	GTGCAC	1 cut(s)	498
VpaK11BI	GGWCC	4 cut(s)	368, 1474, 1894, 1984
VspI	ATTAAT	2 cut(s)	1380, 1451
XapI	RAATTY	4 cut(s)	699, 1095, 1629, 1665
XbaI	TCTAGA	1 cut(s)	1811
XceI	RCATGY	3 cut(s)	260, 1498, 1763
XmaJI	CCTAGG	1 cut(s)	1034
XmiI	GTMKAC	1 cut(s)	1995
XspI	CTAG	7 cut(s)	215, 278, 1035, 1389, 1698, 1812, 2065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.