Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0007752

Physical Location & Seq

Genomic Coordinates Forward (+)

5670804 .. 5683377

Gene Structure 12574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1060700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGCGACCACGCCAGCACTGACGCTTCATCTCTCTCGCCTCGCCCGCCACTTCCCTTTCTCTTCTTCTCCTCTCCCGACTCCTTTTCACTTTCCTCGTGCTCGACTCCTTCTCAGGCTGCCTGACCTGCCCTTCCGCCGCACCCGTTCCTTCTCCACCTCCAACTTTTCCCGCCGATTCTCTGTTGCCGCCTCGACCGGCCCAGGTCTAAGTGATGATGGGATACATGATGAAAGATATGATGTCATTGTGGTCGGAGGAGGACATGCAGGCTGTGAAGCTGCCCTAGCATCTGCTCATTTAGGGGCGAAAACTCTTCTACTCACCCTAAATATTGATAGAATTGCTTGGCAGCCCTGCAACCCAGCAGTTGGTGGACCAGCAAAGTCTCAACTTGTACACGAAGTGGATGCCCTTGGTGGTGAAATTGGGAAGATTTCTGATCGATGCTATTTACAGAAGCGTGTACTCAATGCCTCAAGGGGCCCTGCTGTTCGGGCATTGCGTGCACAGACTGATAAACGGGAATATGCTATGGAAATGAGAAAAATAGTAGAGAGCACACCAAACCTTTCAATTCGAGAGGCAATGGTGACAGATATCTTATTAGGAAAGAATGACAATGTTGAAGGTGTGCGGACATTCTTTGGGATGAACTTCTACTCTCCTTCAGTTATTCTCACGACAGGCACATTTATGAGTGGTAAAATTTGGGTTGGTAGAACTTCTATGCCTGCAGGAAGGGCTGGCGAATCAGCTTCACTTGGACTCACTGAAAACTTACAGCGCCTTGGATTTGAAACTGATCGGTTAAAGACTGGAACCCCAGCGCGTGTGGACTGTCGCACTGTCGGCTGGTTTAGTTTTGATCTTGATGTCCATATTGAAAGGGAACAAATGTGCTGCTATCTCACACGTACCACAAAGAGCACTCACCAACTAATCAAAGATAACTTGCATGAAACTCCTACTTATGGAGGATGGGTTGAGGCGAAGGGGCCTAGGTATTGCCCTTCAATTGAAGATAAGATTGTTCGGTTTCAGGATAAAGAGTCTCATCAAATATTTCTTGAACCAGAGGGCCGAGATGTGCCGGAGCTTTATGTGCAGGGATTCTCAACTGGTTTACCAGAGAGACTACAGTTACCACTCTTGAGGACTTTGCCTGGGCTTGAAAATTGTTCAATGCTGAGGCCTGCTTATGCTGTAGAGTATGACTTCTTGCCTGCTTATCAATGTTCTCGGTCTCTTATGACAAAGAAAATCGATGGGCTTTTCTTCTCTGGTCAAATAAATGGAACTACAGGCTATGAGGAGGCTGCAGCACAAGGCATTATTTCTGGTATCAATGCTGCCAGACATTCAGATGGCAAGTCCCTCATTGTTCTTGAGAGAGAAAGCAGTTATATAGGAACATTGATCGATGATCTGGTCACGAAGGACCTTCGAGAGCCTTACCGCATGCTAACCAGTCGATCAGAGCACCGGTTACTTCTCCGATCTGATAATGCTGATAGCCGTCTCACACCACTGGGGCGTGAAATTGGGTTAATAGATGATAGACGATGGAAACTCTACCAGGACAAACAAGCTCGAATTTCAGAAGAAAAGAAGCGATTGAAATGTGTCAGAATTTCAGGAGGGGAATTGGCAGCTGATGTTACTCGTCTTTCTAGTCAGCCAGTGAAGGACTTTACAACTTTGGAGAGTCTTCTAAAGAAACCACACATAGAATATAAAGTTCTTGATAAGCATGGTTTTGGGAATGAACTGTTGTCTAGAATAGAAAAAGAATGTGTGGAGATTGACATCAAGTATGCCGGCTTCATTCTGCGCCAACAGAGCCAACTCCAACAAATGGTCCATCAACAGCACAGATTACTTCCAGAGGACTTAGATTACTATTCAATAACAACTTTATCTCTTGAATCACGCGAGAAGCTCTCCAAGGTGAGGCCACAGACCGTTGGTCAAGCCAGTAGAGTTGGTGGGGTGAGCCCTGCCGATATCACTGCTCTCCTCATTATCCTTGAAGCTAATAGGAGGAGAGCACATGAACAGAAGAAGCTCGAACTGCTAAATTCTATCAAGACGGATACAGATCAGCATGTAGATGAATTGCCGTTGACTGGGACACTCAGTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001510 GO:0002097 GO:0002098 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0071704 GO:0090304 GO:0097159 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDA GIDA_assoc

Protein Analysis

716

Amino Acids

80.05

Weight (kDa)

8.76

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDA	PF01134	81 - 458	1.2e-145	Glucose inhibited division protein A
FAD_oxidored	PF12831	81 - 109	1e-05	FAD dependent oxidoreductase
GIDA_C_1st	PF21680	520 - 614	1.1e-18	tRNA modifying enzyme MnmG/GidA C-terminal helical domain
SAM_GIDA_C	PF13932	619 - 674	1.2e-21	tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13440
fragaria_vesca	FvH4_7g05150
malus_domestica	MD02G1260800.v1.1 MD07G1060500.v1.1 MD07G1060700.v1.1
prunus_persica	Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1
pyrus_communis	pycom02g22270 pycom07g04640 pycom07g04650
rosa_chinensis	RchiOBHm_Chr1g0331701
rosa_laevigata	RLG00000029721
rosa_multiflora	Rmu_sc0004723.1_g000011 Rmu_sc0005044.1_g000002
rosa_roxburghii	Rroxscaffold_4G00318890
rosa_rugosa	Rorug01G0095700
rosa_samantha	Rh1AG119400 Rh1BG090900 Rh1CG114500 Rh1DG124900
rosa_wichuraiana	Rw1G009650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	135
AccB7I	CCANNNNNTGG	2 cut(s)	371, 1858
AccII	CGCG	2 cut(s)	832, 1935
AciI	CCGC	7 cut(s)	46, 136, 139, 172, 189, 637, 1459
AcsI	RAATTY	4 cut(s)	708, 1596, 1632, 2080
AcuI	CTGAAG	1 cut(s)	654
AdeI	CACNNNGTG	1 cut(s)	406
AfaI	GTAC	3 cut(s)	399, 468, 919
AfiI	CCNNNNNNNGG	5 cut(s)	371, 974, 1858, 1953, 2129
AflIII	ACRYGT	1 cut(s)	914
AgeI	ACCGGT	1 cut(s)	1485
AhdI	GACNNNNNGTC	1 cut(s)	1968
AjnI	CCWGG	3 cut(s)	202, 1165, 1578
AloI	GAACNNNNNNTCC	1 cut(s)	2125
AluBI	AGCT	8 cut(s)	281, 758, 1099, 1592, 1655, 1942, 2036, 2068
AluI	AGCT	8 cut(s)	281, 758, 1099, 1592, 1655, 1942, 2036, 2068
Alw21I	GWGCWC	6 cut(s)	103, 511, 563, 932, 1485, 2053
Alw26I	GTCTC	5 cut(s)	393, 1059, 1129, 1251, 1526
Alw44I	GTGCAC	1 cut(s)	507
AoxI	GGCC	6 cut(s)	199, 484, 998, 1081, 1193, 1955
ApaI	GGGCCC	1 cut(s)	488
ApaLI	GTGCAC	1 cut(s)	507
ApeKI	GCWGC	8 cut(s)	118, 281, 352, 903, 1319, 1322, 1352, 1652
ApoI	RAATTY	4 cut(s)	708, 1596, 1632, 2080
AsiGI	ACCGGT	1 cut(s)	1485
AspA2I	CCTAGG	1 cut(s)	1001
AspLEI	GCGC	3 cut(s)	789, 832, 1836
AspS9I	GGNCC	8 cut(s)	200, 377, 484, 485, 998, 1081, 1441, 1861
AsuHPI	GGTGA	6 cut(s)	316, 434, 604, 926, 1963, 2005
AvaII	GGWCC	3 cut(s)	377, 1441, 1861
AvrII	CCTAGG	1 cut(s)	1001
BaeGI	GKGCMC	2 cut(s)	488, 511
BanII	GRGCYC	2 cut(s)	488, 2000
BarI	GAAGNNNNNNTAC	2 cut(s)	1808, 1840
BauI	CACGAG	1 cut(s)	96
BbsI	GAAGAC	1 cut(s)	1703
Bbv12I	GWGCWC	6 cut(s)	103, 511, 563, 932, 1485, 2053
BbvCI	CCTCAGC	1 cut(s)	1190
BbvI	GCAGC	8 cut(s)	105, 268, 364, 890, 1306, 1334, 1339, 1664
BccI	CCATC	6 cut(s)	212, 975, 1262, 1361, 1560, 1872
BceAI	ACGGC	2 cut(s)	1503, 2107
BcgI	CGANNNNNNTGC	4 cut(s)	392, 426, 1994, 2028
BciT130I	CCWGG	3 cut(s)	204, 1167, 1580
BciVI	GTATCC	2 cut(s)	216, 2089
BcoDI	GTCTC	5 cut(s)	393, 1059, 1129, 1251, 1526
BfaI	CTAG	4 cut(s)	287, 1002, 1674, 1779
BfmI	CTRYAG	5 cut(s)	735, 1139, 1206, 1302, 1320
BfoI	RGCGCY	1 cut(s)	790
BfuAI	ACCTGC	1 cut(s)	135
BfuI	GTATCC	2 cut(s)	216, 2089
BlnI	CCTAGG	1 cut(s)	1001
Bme1390I	CCNGG	3 cut(s)	204, 1167, 1580
Bme18I	GGWCC	3 cut(s)	377, 1441, 1861
BmeRI	GACNNNNNGTC	1 cut(s)	1968
BmgT120I	GGNCC	8 cut(s)	200, 377, 484, 485, 998, 1081, 1441, 1861
BmiI	GGNNCC	4 cut(s)	485, 486, 823, 999
BmrFI	CCNGG	3 cut(s)	204, 1167, 1580
BmrI	ACTGGG	2 cut(s)	1541, 2139
BmsI	GCATC	3 cut(s)	299, 400, 437
BmuI	ACTGGG	2 cut(s)	1541, 2139
BpiI	GAAGAC	1 cut(s)	1703
BplI	GAGNNNNNCTC	2 cut(s)	1928, 1960
Bpu10I	CCTNAGC	1 cut(s)	1190
BpuEI	CTTGAG	3 cut(s)	463, 1174, 1409
Bsa29I	ATCGAT	3 cut(s)	445, 1266, 1422
BsaAI	YACGTR	1 cut(s)	917
BsaBI	GATNNNNATC	2 cut(s)	1808, 2100
BsaI	GGTCTC	1 cut(s)	1251
BsaJI	CCNNGG	6 cut(s)	202, 415, 790, 1001, 1166, 1947
BsaWI	WCCGGW	1 cut(s)	1485
BsaXI	ACNNNNNCTCC	2 cut(s)	969, 999
Bsc4I	CCNNNNNNNGG	5 cut(s)	371, 974, 1858, 1953, 2129
Bse118I	RCCGGY	3 cut(s)	197, 1485, 1820
Bse1I	ACTGG	7 cut(s)	823, 1126, 1470, 1536, 1682, 1977, 2134
Bse3DI	GCAATG	2 cut(s)	500, 594
Bse8I	GATNNNNATC	2 cut(s)	1808, 2100
BseBI	CCWGG	3 cut(s)	204, 1167, 1580
BseCI	ATCGAT	3 cut(s)	445, 1266, 1422
BseDI	CCNNGG	6 cut(s)	202, 415, 790, 1001, 1166, 1947
BseGI	GGATG	3 cut(s)	415, 657, 986
BseJI	GATNNNNATC	2 cut(s)	1808, 2100
BseLI	CCNNNNNNNGG	5 cut(s)	371, 974, 1858, 1953, 2129
BseMI	GCAATG	2 cut(s)	500, 594
BseMII	CTCAG	2 cut(s)	127, 1181
BseNI	ACTGG	7 cut(s)	823, 1126, 1470, 1536, 1682, 1977, 2134
BseRI	GAGGAG	5 cut(s)	60, 273, 1328, 2009, 2059
BseSI	GKGCMC	2 cut(s)	488, 511
BseXI	GCAGC	8 cut(s)	105, 268, 364, 890, 1306, 1334, 1339, 1664
BseYI	CCCAGC	2 cut(s)	364, 826
BsgI	GTGCAG	1 cut(s)	1127
Bsh1236I	CGCG	2 cut(s)	832, 1935
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	6 cut(s)	201, 486, 1000, 1083, 1195, 1957
BshTI	ACCGGT	1 cut(s)	1485
BshVI	ATCGAT	3 cut(s)	445, 1266, 1422
BsiEI	CGRYCG	1 cut(s)	198
BsiHKAI	GWGCWC	6 cut(s)	103, 511, 563, 932, 1485, 2053
BsiSI	CCGG	4 cut(s)	198, 1094, 1486, 1821
BslFI	GGGAC	1 cut(s)	1360
BslI	CCNNNNNNNGG	5 cut(s)	371, 974, 1858, 1953, 2129
BsmAI	GTCTC	5 cut(s)	393, 1059, 1129, 1251, 1526
BsmBI	CGTCTC	1 cut(s)	1526
BsmFI	GGGAC	1 cut(s)	1360
BsnI	GGCC	6 cut(s)	201, 486, 1000, 1083, 1195, 1957
Bso31I	GGTCTC	1 cut(s)	1251
Bsp120I	GGGCCC	1 cut(s)	484
Bsp1286I	GDGCHC	8 cut(s)	103, 488, 511, 563, 932, 1485, 2000, 2053
Bsp1407I	TGTACA	1 cut(s)	397
Bsp143I	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
BspACI	CCGC	7 cut(s)	46, 136, 139, 172, 189, 637, 1459
BspANI	GGCC	6 cut(s)	201, 486, 1000, 1083, 1195, 1957
BspCNI	CTCAG	2 cut(s)	126, 1182
BspDI	ATCGAT	3 cut(s)	445, 1266, 1422
BspFNI	CGCG	2 cut(s)	832, 1935
BspHI	TCATGA	1 cut(s)	2144
BspLI	GGNNCC	4 cut(s)	485, 486, 823, 999
BspMAI	CTGCAG	2 cut(s)	739, 1324
BspMI	ACCTGC	1 cut(s)	135
BspTNI	GGTCTC	1 cut(s)	1251
BsrDI	GCAATG	2 cut(s)	500, 594
BsrFI	RCCGGY	3 cut(s)	197, 1485, 1820
BsrGI	TGTACA	1 cut(s)	397
BsrI	ACTGG	7 cut(s)	823, 1126, 1470, 1536, 1682, 1977, 2134
BssAI	RCCGGY	3 cut(s)	197, 1485, 1820
BssECI	CCNNGG	6 cut(s)	202, 415, 790, 1001, 1166, 1947
BssMI	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
BssSI	CACGAG	1 cut(s)	96
BssT1I	CCWWGG	4 cut(s)	415, 790, 1001, 1947
Bst2BI	CACGAG	1 cut(s)	96
Bst2UI	CCWGG	3 cut(s)	204, 1167, 1580
Bst4CI	ACNGT	5 cut(s)	842, 850, 1143, 1773, 1966
Bst6I	CTCTTC	2 cut(s)	67, 321
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstAUI	TGTACA	1 cut(s)	397
BstBAI	YACGTR	1 cut(s)	917
BstDEI	CTNAG	5 cut(s)	113, 209, 1190, 1894, 2138
BstF5I	GGATG	3 cut(s)	415, 657, 986
BstFNI	CGCG	2 cut(s)	832, 1935
BstH2I	RGCGCY	1 cut(s)	790
BstHHI	GCGC	3 cut(s)	789, 832, 1836
BstKTI	GATC	8 cut(s)	445, 808, 871, 1422, 1429, 1478, 1502, 2104
BstMAI	GTCTC	5 cut(s)	393, 1059, 1129, 1251, 1526
BstMBI	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
BstMCI	CGRYCG	1 cut(s)	198
BstNI	CCWGG	3 cut(s)	204, 1167, 1580
BstNSI	RCATGY	3 cut(s)	269, 1465, 2111
BstSCI	CCNGG	3 cut(s)	202, 1165, 1578
BstSFI	CTRYAG	5 cut(s)	735, 1139, 1206, 1302, 1320
BstSLI	GKGCMC	2 cut(s)	488, 511
BstUI	CGCG	2 cut(s)	832, 1935
BstV1I	GCAGC	8 cut(s)	105, 268, 364, 890, 1306, 1334, 1339, 1664
BstV2I	GAAGAC	1 cut(s)	1703
Bsu15I	ATCGAT	3 cut(s)	445, 1266, 1422
BsuI	GTATCC	2 cut(s)	216, 2089
BsuRI	GGCC	6 cut(s)	201, 486, 1000, 1083, 1195, 1957
BsuTUI	ATCGAT	3 cut(s)	445, 1266, 1422
BtsCI	GGATG	3 cut(s)	415, 657, 986
BtsI	GCAGTG	1 cut(s)	2010
BtsIMutI	CAGTG	6 cut(s)	17, 771, 846, 1529, 1689, 2010
BveI	ACCTGC	1 cut(s)	135
CciI	TCATGA	1 cut(s)	2144
CfoI	GCGC	3 cut(s)	789, 832, 1836
Cfr10I	RCCGGY	3 cut(s)	197, 1485, 1820
Cfr13I	GGNCC	8 cut(s)	200, 377, 484, 485, 998, 1081, 1441, 1861
ClaI	ATCGAT	3 cut(s)	445, 1266, 1422
CseI	GACGC	1 cut(s)	31
Csp6I	GTAC	3 cut(s)	398, 467, 918
CspAI	ACCGGT	1 cut(s)	1485
CviAII	CATG	8 cut(s)	227, 266, 959, 1462, 1754, 2054, 2108, 2145
CviQI	GTAC	3 cut(s)	398, 467, 918
DdeI	CTNAG	5 cut(s)	113, 209, 1190, 1894, 2138
DpnI	GATC	8 cut(s)	444, 807, 870, 1421, 1428, 1477, 1501, 2103
DpnII	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
DraIII	CACNNNGTG	1 cut(s)	406
DriI	GACNNNNNGTC	1 cut(s)	1968
Eam1104I	CTCTTC	2 cut(s)	67, 321
Eam1105I	GACNNNNNGTC	1 cut(s)	1968
EarI	CTCTTC	2 cut(s)	67, 321
EciI	GGCGGA	1 cut(s)	125
Eco130I	CCWWGG	4 cut(s)	415, 790, 1001, 1947
Eco147I	AGGCCT	1 cut(s)	1195
Eco24I	GRGCYC	2 cut(s)	488, 2000
Eco31I	GGTCTC	1 cut(s)	1251
Eco32I	GATATC	2 cut(s)	601, 2008
Eco47I	GGWCC	3 cut(s)	377, 1441, 1861
Eco57I	CTGAAG	1 cut(s)	654
EcoO109I	RGGNCCY	4 cut(s)	484, 485, 998, 1441
EcoRII	CCWGG	3 cut(s)	202, 1165, 1578
EcoRV	GATATC	2 cut(s)	601, 2008
EcoT14I	CCWWGG	4 cut(s)	415, 790, 1001, 1947
EcoT38I	GRGCYC	2 cut(s)	488, 2000
ErhI	CCWWGG	4 cut(s)	415, 790, 1001, 1947
Esp3I	CGTCTC	1 cut(s)	1526
FaeI	CATG	8 cut(s)	230, 269, 962, 1465, 1757, 2057, 2111, 2148
FaqI	GGGAC	1 cut(s)	1360
FatI	CATG	8 cut(s)	226, 265, 958, 1461, 1753, 2053, 2107, 2144
FauI	CCCGC	2 cut(s)	53, 179
FokI	GGATG	3 cut(s)	422, 664, 993
FriOI	GRGCYC	2 cut(s)	488, 2000
FspBI	CTAG	4 cut(s)	287, 1002, 1674, 1779
GlaI	GCGC	3 cut(s)	788, 831, 1835
GsaI	CCCAGC	2 cut(s)	368, 830
HaeII	RGCGCY	1 cut(s)	790
HaeIII	GGCC	6 cut(s)	201, 486, 1000, 1083, 1195, 1957
HapII	CCGG	4 cut(s)	198, 1094, 1486, 1821
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	3 cut(s)	789, 832, 1836
Hin1II	CATG	8 cut(s)	230, 269, 962, 1465, 1757, 2057, 2111, 2148
Hin6I	GCGC	3 cut(s)	787, 830, 1834
HinP1I	GCGC	3 cut(s)	787, 830, 1834
HincII	GTYRAC	1 cut(s)	2127
HindII	GTYRAC	1 cut(s)	2127
HinfI	GANTC	9 cut(s)	79, 105, 177, 752, 768, 1052, 1113, 1708, 1928
HpaII	CCGG	4 cut(s)	198, 1094, 1486, 1821
HphI	GGTGA	6 cut(s)	316, 434, 604, 926, 1963, 2005
Hpy166II	GTNNAC	7 cut(s)	377, 400, 467, 509, 838, 1127, 2127
Hpy188I	TCNGA	8 cut(s)	257, 442, 1366, 1480, 1499, 1504, 1603, 1631
Hpy8I	GTNNAC	7 cut(s)	377, 400, 467, 509, 838, 1127, 2127
HpyCH4III	ACNGT	5 cut(s)	842, 850, 1143, 1773, 1966
HpyCH4IV	ACGT	1 cut(s)	916
HpyCH4V	TGCA	7 cut(s)	269, 360, 509, 737, 958, 1108, 1322
HpyF3I	CTNAG	5 cut(s)	113, 209, 1190, 1894, 2138
HpySE526I	ACGT	1 cut(s)	916
Hsp92II	CATG	8 cut(s)	230, 269, 962, 1465, 1757, 2057, 2111, 2148
HspAI	GCGC	3 cut(s)	787, 830, 1834
KroI	GCCGGC	1 cut(s)	1820
KroNI	GCCGGC	1 cut(s)	1822
Kzo9I	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
LmnI	GCTCC	1 cut(s)	1096
Lsp1109I	GCAGC	8 cut(s)	105, 268, 364, 890, 1306, 1334, 1339, 1664
LweI	GCATC	3 cut(s)	299, 400, 437
MaeI	CTAG	4 cut(s)	287, 1002, 1674, 1779
MaeII	ACGT	1 cut(s)	916
MaeIII	GTNAC	5 cut(s)	592, 1143, 1432, 1488, 1660
MalI	GATC	8 cut(s)	444, 807, 870, 1421, 1428, 1477, 1501, 2103
MboI	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
MboII	GAAGA	9 cut(s)	54, 57, 308, 445, 1034, 1270, 1616, 1703, 2074
MfeI	CAATTG	1 cut(s)	1017
MhlI	GDGCHC	8 cut(s)	103, 488, 511, 563, 932, 1485, 2000, 2053
MlyI	GAGTC	5 cut(s)	73, 99, 762, 1061, 1717
MmeI	TCCRAC	3 cut(s)	186, 235, 1876
MroNI	GCCGGC	1 cut(s)	1820
MseI	TTAA	2 cut(s)	812, 1550
MslI	CAYNNNNRTG	3 cut(s)	695, 1365, 2112
MspA1I	CMGCKG	1 cut(s)	1655
MspI	CCGG	4 cut(s)	198, 1094, 1486, 1821
MspR9I	CCNGG	3 cut(s)	204, 1167, 1580
MunI	CAATTG	1 cut(s)	1017
MvaI	CCWGG	3 cut(s)	204, 1167, 1580
MvnI	CGCG	2 cut(s)	832, 1935
NaeI	GCCGGC	1 cut(s)	1822
NdeII	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
NgoMIV	GCCGGC	1 cut(s)	1820
NlaIII	CATG	8 cut(s)	230, 269, 962, 1465, 1757, 2057, 2111, 2148
NlaIV	GGNNCC	4 cut(s)	485, 486, 823, 999
NmeAIII	GCCGAG	1 cut(s)	1109
NmuCI	GTSAC	2 cut(s)	592, 1432
NspI	RCATGY	3 cut(s)	269, 1465, 2111
PaeI	GCATGC	1 cut(s)	1465
PagI	TCATGA	1 cut(s)	2144
PceI	AGGCCT	1 cut(s)	1195
PcsI	WCGNNNNNNNCGW	1 cut(s)	502
PdiI	GCCGGC	1 cut(s)	1822
PfeI	GAWTC	4 cut(s)	177, 752, 1113, 1928
PflMI	CCANNNNNTGG	2 cut(s)	371, 1858
PinAI	ACCGGT	1 cut(s)	1485
PleI	GAGTC	5 cut(s)	73, 99, 762, 1060, 1716
PpsI	GAGTC	5 cut(s)	73, 99, 762, 1060, 1716
Ppu21I	YACGTR	1 cut(s)	917
PpuMI	RGGWCCY	1 cut(s)	1441
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	3 cut(s)	202, 1165, 1578
PspFI	CCCAGC	2 cut(s)	364, 826
PspGI	CCWGG	3 cut(s)	202, 1165, 1578
PspN4I	GGNNCC	4 cut(s)	485, 486, 823, 999
PspOMI	GGGCCC	1 cut(s)	484
PspPI	GGNCC	8 cut(s)	200, 377, 484, 485, 998, 1081, 1441, 1861
PspPPI	RGGWCCY	1 cut(s)	1441
PstI	CTGCAG	2 cut(s)	739, 1324
PvuII	CAGCTG	1 cut(s)	1655
RsaI	GTAC	3 cut(s)	399, 468, 919
RsaNI	GTAC	3 cut(s)	398, 467, 918
RseI	CAYNNNNRTG	3 cut(s)	695, 1365, 2112
SaqAI	TTAA	2 cut(s)	812, 1550
Sau3AI	GATC	8 cut(s)	442, 805, 868, 1419, 1426, 1475, 1499, 2101
Sau96I	GGNCC	8 cut(s)	200, 377, 484, 485, 998, 1081, 1441, 1861
SbfI	CCTGCAGG	1 cut(s)	739
SchI	GAGTC	5 cut(s)	73, 99, 762, 1061, 1717
ScrFI	CCNGG	3 cut(s)	204, 1167, 1580
SdaI	CCTGCAGG	1 cut(s)	739
SduI	GDGCHC	8 cut(s)	103, 488, 511, 563, 932, 1485, 2000, 2053
SfaNI	GCATC	3 cut(s)	299, 400, 437
SfcI	CTRYAG	5 cut(s)	735, 1139, 1206, 1302, 1320
SinI	GGWCC	3 cut(s)	377, 1441, 1861
SmiMI	CAYNNNNRTG	3 cut(s)	695, 1365, 2112
SmlI	CTYRAG	3 cut(s)	478, 1153, 1388
SmoI	CTYRAG	3 cut(s)	478, 1153, 1388
SphI	GCATGC	1 cut(s)	1465
Sse8387I	CCTGCAGG	1 cut(s)	739
SseBI	AGGCCT	1 cut(s)	1195
SsiI	CCGC	7 cut(s)	46, 136, 139, 172, 189, 637, 1459
SspI	AATATT	2 cut(s)	334, 1065
SspMI	CTAG	4 cut(s)	287, 1002, 1674, 1779
StuI	AGGCCT	1 cut(s)	1195
StyD4I	CCNGG	3 cut(s)	202, 1165, 1578
StyI	CCWWGG	4 cut(s)	415, 790, 1001, 1947
TaaI	ACNGT	5 cut(s)	842, 850, 1143, 1773, 1966
TaiI	ACGT	1 cut(s)	919
TaqII	GACCGA	1 cut(s)	1233
TatI	WGTACW	2 cut(s)	397, 466
TauI	GCSGC	2 cut(s)	141, 191
TfiI	GAWTC	4 cut(s)	177, 752, 1113, 1928
Tru1I	TTAA	2 cut(s)	812, 1550
Tru9I	TTAA	2 cut(s)	812, 1550
TscAI	CASTG	6 cut(s)	24, 778, 853, 1536, 1689, 2017
TseFI	GTSAC	2 cut(s)	592, 1432
TseI	GCWGC	8 cut(s)	118, 281, 352, 903, 1319, 1322, 1352, 1652
Tsp45I	GTSAC	2 cut(s)	592, 1432
TspDTI	ATGAA	9 cut(s)	17, 246, 668, 975, 1782, 1816, 2070, 2130, 2133
TspGWI	ACGGA	1 cut(s)	2108
TspRI	CASTG	6 cut(s)	24, 778, 853, 1536, 1689, 2017
Van91I	CCANNNNNTGG	2 cut(s)	371, 1858
VneI	GTGCAC	1 cut(s)	507
VpaK11BI	GGWCC	3 cut(s)	377, 1441, 1861
XapI	RAATTY	4 cut(s)	708, 1596, 1632, 2080
XbaI	TCTAGA	1 cut(s)	1778
XceI	RCATGY	3 cut(s)	269, 1465, 2111
XmaJI	CCTAGG	1 cut(s)	1001
XspI	CTAG	4 cut(s)	287, 1002, 1674, 1779

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.