Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007752

Physical Location & Seq

Genomic Coordinates Forward (+)

46316175 .. 46330565

Gene Structure 14391 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00318890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGCAACTCCAGCACTGACGCTTCATCTCTCCCGAGTCGCTCGCCACTCGCCTTTCTCTTCTCCGTTGTTCAAACCTGTTCTCTATCCTTGTGCTCGTATCGTTCCCAAGCTGCCTTTCCGCCGCAGGGTTGGCTTCAGCTGCAACCTCTCCCGGCGATTCACCGTTGCCGCCTCAATTTCTCCAGACTTGAGTAATACTGGGAATCATGGACTAGATGATGAAAGATATGATGTCATTGTGGTTGGAGGAGGACATGCAGGCTGTGAAGCTGCCCTAGCATCTGCCCGTTTAGGGGCAAGAACTCTTCTCCTCACACTGAATATTGATAGAATTGCTTGGCAGCCTTGCAACCCAGCAGTAGGCGGACCAGCAAAATCACAACTTGTGCATGAAGTCGATGCTCTTGGTGGGGAAATTGGGAAGATTGCTGATAGGTGCTATTTACAAAAGCGTATTCTAAATACCTCAAGGGGCCCTGCTGTTCGAGCATTGCGTGCACAAACCGATAAACGGGAATATGCTATGCAAATGAGAGAAATTGTAGAGAGGCAAGTTGCTCCAAACCTTTCAATTAGGGAGGCAATGGTAACAGATATCTTATTAGGAAAGAATGATGACATAGAAGGTGTACAAACATTTTTTGGGATGAACTTCTATGCTCCTTCTGTCATCCTCACGACAGGCACATTTATGAGTGGTAAAATTTGGGTTGGTAGAACTTCTATGCCTGCAGGAAGAGCTGGGGAATCAGCTTCACTTGGACTCACTGAGAACTTACAGAGACTTGGATTCGAAACTGACCGATTAAAGACTGGAACTCCAGCACGTGTTGACCGCCGCACTGTTGATTATTCTGGATTGGAACCACAACATGGTGACGAAGAGGTTGGCTGGTTTAGTTTTGATCTTGATTTCCATGTTGAAAGGGAACAAATGTGCTGCTATCTAACTCGTACCACAAAGAGCACTCACCAACTAATCAGAGAGAACTTGCATGAAACTCCCACTTATGGAGGATGGGTTGAGGCGAAGGGGCCTAGGTATTGTCCTTCAATTGAAGATAAGATTGTCCGGTTTAAGGATAAAGAATCGCATCAAATTTTTCTTGAACCAGAGGGTCGAAATGTGCCTGAGCTTTATGTGCAGGGTTTCTCAACTGGCTTACCAGAGAGACTACAATTACCACTCTTGAGGACATTACCTGGACTTGAAAACTGTTCAATGCTGAGGCCTGCTTATGCTGTAGAGTATGATTACTTGCCTGCTCATCAATGTTCTCGCTCTCTTATGACAAAGAAAATTGGTGGGCTTTTCTTTTCTGGTCAAATAAATGGAACTACGGGCTATGAAGAGGCTGCAGCCCAGGGCATTGTTTCTGGTATTAATGCTGCGAGGCACGCAGATGGTAAGTCCCTCATTGTTTTTGAGAGAGAAAGCAGCTACATAGGCACATTAATTGATGATCTGGTCACAAAGGACCTTCGAGAGCCTTACCGCATGTTAACAAGCCGCTCTGAACACCGGCTACTTCTTCGATCTGACAACGCAGATAGTCGTCTGACCCCGTTGGGCCGTGAAATTGGGTTAATAGATGATAGACGTTGGAAACTCTACCAAGACAAGCAATCTCGAATTTCAGAAGAGAAGAAGCGATTAAAAAGTGTTCGAATTTCAGGGGGAGAACTGTCTGCTAATGTTACTAGCCTTTCAAGTCAGCCAGTGAAAGACTTTTCAACTCTGGAGAGTCTTCTTAAGAAACCACATGTAGAATATAAAGTTCTTGATAAGCATGGTTATGGGAATGAAATGTTGTCTAGAGTTGAAAAAGAATGCGTGGAGATTGACATCAAGTATGAGGGCTTCATTGTGCGCCAGCAGAACCAACTCCAACAGATGGTCCATCAACAACATAAACGACTTCCAGAGGACTTGGATTACAATGCGATAACAACATTGTCCCTTGAAGCACGCGAAAAACTCTCAAAGGTGAGACCACAAACCATTGGTCAGGCAAGCAGAGTTGGTGGGGTGAATCCTGCTGATATTACTGCTCTCCTCATTATCCTTGAAGCCAATAGGAGAATAGCATACCAAGAGAAGAAGCTTCAATTGCTAAACTCTGTGAAGACAGATACAGATCGACACGTATCTGCAGTTTCTTTGAAGGAGACGAACAGCTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001510 GO:0002097 GO:0002098 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0071704 GO:0090304 GO:0097159 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GIDA GIDA_assoc

Protein Analysis

728

Amino Acids

81.51

Weight (kDa)

8.89

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIDA	PF01134	78 - 471	5e-155	Glucose inhibited division protein A
FAD_oxidored	PF12831	78 - 106	1.7e-06	FAD dependent oxidoreductase
GIDA_C_1st	PF21680	533 - 627	2.5e-19	tRNA modifying enzyme MnmG/GidA C-terminal helical domain
SAM_GIDA_C	PF13932	632 - 687	5.8e-24	tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13440
fragaria_vesca	FvH4_7g05150
malus_domestica	MD02G1260800.v1.1 MD07G1060500.v1.1 MD07G1060700.v1.1
prunus_persica	Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1 Prupe.5G002000_v2.0.a1
pyrus_communis	pycom02g22270 pycom07g04640 pycom07g04650
rosa_chinensis	RchiOBHm_Chr1g0331701
rosa_laevigata	RLG00000029721
rosa_multiflora	Rmu_sc0004723.1_g000011 Rmu_sc0005044.1_g000002
rosa_roxburghii	Rroxscaffold_4G00318890
rosa_rugosa	Rorug01G0095700
rosa_samantha	Rh1AG119400 Rh1BG090900 Rh1CG114500 Rh1DG124900
rosa_wichuraiana	Rw1G009650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	875, 1897
AccBSI	CCGCTC	1 cut(s)	1515
AccII	CGCG	1 cut(s)	1974
AciI	CCGC	8 cut(s)	121, 124, 171, 366, 838, 841, 1498, 1513
AcsI	RAATTY	4 cut(s)	705, 1101, 1635, 1671
AcuI	CTGAAG	1 cut(s)	121
AcvI	CACGTG	1 cut(s)	830
AfaI	GTAC	2 cut(s)	633, 958
AfiI	CCNNNNNNNGG	9 cut(s)	127, 294, 295, 362, 513, 875, 1013, 1081, 1897
AflII	CTTAAG	1 cut(s)	1754
AflIII	ACRYGT	3 cut(s)	829, 1765, 2146
AjnI	CCWGG	2 cut(s)	1204, 1365
AjuI	GAANNNNNNNTTGG	2 cut(s)	101, 133
AluBI	AGCT	9 cut(s)	112, 141, 272, 743, 755, 1138, 1443, 2107, 2181
AluI	AGCT	9 cut(s)	112, 141, 272, 743, 755, 1138, 1443, 2107, 2181
Alw21I	GWGCWC	3 cut(s)	97, 502, 971
Alw26I	GTCTC	4 cut(s)	778, 1168, 1987, 2165
Alw44I	GTGCAC	1 cut(s)	498
Ama87I	CYCGRG	1 cut(s)	33
AoxI	GGCC	4 cut(s)	475, 1037, 1232, 1573
ApaI	GGGCCC	1 cut(s)	479
ApaLI	GTGCAC	1 cut(s)	498
ApeKI	GCWGC	9 cut(s)	112, 141, 272, 343, 942, 1358, 1361, 1391, 1440
ApoI	RAATTY	4 cut(s)	705, 1101, 1635, 1671
ArsI	GACNNNNNNTTYG	2 cut(s)	1993, 2025
AseI	ATTAAT	2 cut(s)	1386, 1457
AspA2I	CCTAGG	1 cut(s)	1040
AspLEI	GCGC	1 cut(s)	1875
AspS9I	GGNCC	7 cut(s)	368, 475, 476, 1037, 1480, 1573, 1900
AsuC2I	CCSGG	1 cut(s)	154
AsuHPI	GGTGA	5 cut(s)	154, 890, 965, 2002, 2044
AsuII	TTCGAA	2 cut(s)	795, 1669
AvaI	CYCGRG	1 cut(s)	33
AvaII	GGWCC	3 cut(s)	368, 1480, 1900
AvrII	CCTAGG	1 cut(s)	1040
BaeGI	GKGCMC	2 cut(s)	479, 502
BanII	GRGCYC	1 cut(s)	479
BarI	GAAGNNNNNNTAC	2 cut(s)	1847, 1879
BauI	CACGAG	1 cut(s)	2182
BbrPI	CACGTG	1 cut(s)	830
BbsI	GAAGAC	2 cut(s)	1742, 2135
Bbv12I	GWGCWC	3 cut(s)	97, 502, 971
BbvCI	CCTCAGC	1 cut(s)	1229
BbvI	GCAGC	9 cut(s)	99, 128, 259, 355, 929, 1345, 1373, 1378, 1452
BccI	CCATC	4 cut(s)	1014, 1400, 1891, 1911
BceAI	ACGGC	1 cut(s)	1560
BciT130I	CCWGG	2 cut(s)	1206, 1367
BcnI	CCSGG	1 cut(s)	154
BcoDI	GTCTC	4 cut(s)	778, 1168, 1987, 2165
BfaI	CTAG	5 cut(s)	215, 278, 1041, 1704, 1818
BfmI	CTRYAG	4 cut(s)	732, 1245, 1359, 2154
BfrI	CTTAAG	1 cut(s)	1754
BlnI	CCTAGG	1 cut(s)	1040
Bme1390I	CCNGG	3 cut(s)	154, 1206, 1367
Bme18I	GGWCC	3 cut(s)	368, 1480, 1900
BmeT110I	CYCGRG	1 cut(s)	33
BmgT120I	GGNCC	7 cut(s)	368, 475, 476, 1037, 1480, 1573, 1900
BmiI	GGNNCC	4 cut(s)	476, 477, 867, 1038
BmrFI	CCNGG	3 cut(s)	154, 1206, 1367
BmrI	ACTGGG	1 cut(s)	210
BmsI	GCATC	3 cut(s)	290, 391, 1105
BmuI	ACTGGG	1 cut(s)	210
BpiI	GAAGAC	2 cut(s)	1742, 2135
BpmI	CTGGAG	3 cut(s)	168, 807, 1763
Bpu10I	CCTNAGC	2 cut(s)	1134, 1229
Bpu14I	TTCGAA	2 cut(s)	795, 1669
BpuEI	CTTGAG	3 cut(s)	211, 454, 1213
BpuMI	CCSGG	1 cut(s)	154
BsaAI	YACGTR	2 cut(s)	830, 2149
BsaBI	GATNNNNATC	2 cut(s)	1847, 2139
BsaI	GGTCTC	1 cut(s)	1987
BsaJI	CCNNGG	3 cut(s)	1040, 1365, 1366
BsaWI	WCCGGW	1 cut(s)	1074
BsaXI	ACNNNNNCTCC	4 cut(s)	805, 835, 1008, 1038
Bsc4I	CCNNNNNNNGG	9 cut(s)	127, 294, 295, 362, 513, 875, 1013, 1081, 1897
Bse118I	RCCGGY	1 cut(s)	1524
Bse1I	ACTGG	4 cut(s)	205, 820, 1165, 1721
Bse3DI	GCAATG	2 cut(s)	491, 591
Bse8I	GATNNNNATC	2 cut(s)	1847, 2139
BseBI	CCWGG	2 cut(s)	1206, 1367
BseDI	CCNNGG	3 cut(s)	1040, 1365, 1366
BseGI	GGATG	3 cut(s)	654, 672, 1025
BseJI	GATNNNNATC	2 cut(s)	1847, 2139
BseLI	CCNNNNNNNGG	9 cut(s)	127, 294, 295, 362, 513, 875, 1013, 1081, 1897
BseMI	GCAATG	2 cut(s)	491, 591
BseMII	CTCAG	3 cut(s)	762, 1125, 1220
BseNI	ACTGG	4 cut(s)	205, 820, 1165, 1721
BseRI	GAGGAG	3 cut(s)	264, 302, 2048
BseSI	GKGCMC	2 cut(s)	479, 502
BseXI	GCAGC	9 cut(s)	99, 128, 259, 355, 929, 1345, 1373, 1378, 1452
BseYI	CCCAGC	2 cut(s)	355, 743
BsgI	GTGCAG	1 cut(s)	1166
Bsh1236I	CGCG	1 cut(s)	1974
BshFI	GGCC	4 cut(s)	477, 1039, 1234, 1575
BsiHKAI	GWGCWC	3 cut(s)	97, 502, 971
BsiHKCI	CYCGRG	1 cut(s)	33
BsiSI	CCGG	3 cut(s)	154, 1075, 1525
BslFI	GGGAC	2 cut(s)	1399, 1945
BslI	CCNNNNNNNGG	9 cut(s)	127, 294, 295, 362, 513, 875, 1013, 1081, 1897
BsmAI	GTCTC	4 cut(s)	778, 1168, 1987, 2165
BsmBI	CGTCTC	1 cut(s)	2165
BsmFI	GGGAC	2 cut(s)	1399, 1945
BsmI	GAATGC	1 cut(s)	1838
BsnI	GGCC	4 cut(s)	477, 1039, 1234, 1575
Bso31I	GGTCTC	1 cut(s)	1987
BsoBI	CYCGRG	1 cut(s)	33
Bsp119I	TTCGAA	2 cut(s)	795, 1669
Bsp120I	GGGCCC	1 cut(s)	475
Bsp1286I	GDGCHC	4 cut(s)	97, 479, 502, 971
Bsp1407I	TGTACA	1 cut(s)	631
Bsp143I	GATC	4 cut(s)	907, 1465, 1538, 2140
BspACI	CCGC	8 cut(s)	121, 124, 171, 366, 838, 841, 1498, 1513
BspANI	GGCC	4 cut(s)	477, 1039, 1234, 1575
BspCNI	CTCAG	3 cut(s)	763, 1126, 1221
BspFNI	CGCG	1 cut(s)	1974
BspLI	GGNNCC	4 cut(s)	476, 477, 867, 1038
BspMAI	CTGCAG	3 cut(s)	736, 1363, 2158
BspQI	GCTCTTC	1 cut(s)	733
BspT104I	TTCGAA	2 cut(s)	795, 1669
BspTI	CTTAAG	1 cut(s)	1754
BspTNI	GGTCTC	1 cut(s)	1987
BsrBI	CCGCTC	1 cut(s)	1515
BsrDI	GCAATG	2 cut(s)	491, 591
BsrFI	RCCGGY	1 cut(s)	1524
BsrGI	TGTACA	1 cut(s)	631
BsrI	ACTGG	4 cut(s)	205, 820, 1165, 1721
BssAI	RCCGGY	1 cut(s)	1524
BssECI	CCNNGG	3 cut(s)	1040, 1365, 1366
BssMI	GATC	4 cut(s)	907, 1465, 1538, 2140
BssSI	CACGAG	1 cut(s)	2182
BssT1I	CCWWGG	1 cut(s)	1040
Bst2BI	CACGAG	1 cut(s)	2182
Bst2UI	CCWGG	2 cut(s)	1206, 1367
Bst4CI	ACNGT	4 cut(s)	166, 847, 1220, 1689
Bst6I	CTCTTC	6 cut(s)	64, 312, 733, 879, 1347, 1638
BstAFI	CTTAAG	1 cut(s)	1754
BstAPI	GCANNNNNTGC	1 cut(s)	497
BstAUI	TGTACA	1 cut(s)	631
BstBAI	YACGTR	2 cut(s)	830, 2149
BstBI	TTCGAA	2 cut(s)	795, 1669
BstDEI	CTNAG	3 cut(s)	771, 1134, 1229
BstF5I	GGATG	3 cut(s)	654, 672, 1025
BstFNI	CGCG	1 cut(s)	1974
BstHHI	GCGC	1 cut(s)	1875
BstKTI	GATC	4 cut(s)	910, 1468, 1541, 2143
BstMAI	GTCTC	4 cut(s)	778, 1168, 1987, 2165
BstMBI	GATC	4 cut(s)	907, 1465, 1538, 2140
BstNI	CCWGG	2 cut(s)	1206, 1367
BstNSI	RCATGY	3 cut(s)	260, 1504, 1769
BstSCI	CCNGG	3 cut(s)	152, 1204, 1365
BstSFI	CTRYAG	4 cut(s)	732, 1245, 1359, 2154
BstSLI	GKGCMC	2 cut(s)	479, 502
BstUI	CGCG	1 cut(s)	1974
BstV1I	GCAGC	9 cut(s)	99, 128, 259, 355, 929, 1345, 1373, 1378, 1452
BstV2I	GAAGAC	2 cut(s)	1742, 2135
BsuRI	GGCC	4 cut(s)	477, 1039, 1234, 1575
BtsCI	GGATG	3 cut(s)	654, 672, 1025
BtsIMutI	CAGTG	5 cut(s)	14, 317, 768, 843, 1728
CfoI	GCGC	1 cut(s)	1875
Cfr10I	RCCGGY	1 cut(s)	1524
Cfr13I	GGNCC	7 cut(s)	368, 475, 476, 1037, 1480, 1573, 1900
CseI	GACGC	1 cut(s)	28
Csp6I	GTAC	2 cut(s)	632, 957
CviAII	CATG	9 cut(s)	209, 257, 392, 875, 920, 998, 1501, 1766, 1793
CviQI	GTAC	2 cut(s)	632, 957
DdeI	CTNAG	3 cut(s)	771, 1134, 1229
DpnI	GATC	4 cut(s)	909, 1467, 1540, 2142
DpnII	GATC	4 cut(s)	907, 1465, 1538, 2140
Eam1104I	CTCTTC	6 cut(s)	64, 312, 733, 879, 1347, 1638
EarI	CTCTTC	6 cut(s)	64, 312, 733, 879, 1347, 1638
EciI	GGCGGA	2 cut(s)	110, 381
Eco130I	CCWWGG	1 cut(s)	1040
Eco147I	AGGCCT	1 cut(s)	1234
Eco24I	GRGCYC	1 cut(s)	479
Eco31I	GGTCTC	1 cut(s)	1987
Eco32I	GATATC	1 cut(s)	598
Eco47I	GGWCC	3 cut(s)	368, 1480, 1900
Eco57I	CTGAAG	1 cut(s)	121
Eco72I	CACGTG	1 cut(s)	830
Eco88I	CYCGRG	1 cut(s)	33
EcoO109I	RGGNCCY	4 cut(s)	475, 476, 1037, 1480
EcoRII	CCWGG	2 cut(s)	1204, 1365
EcoRV	GATATC	1 cut(s)	598
EcoT14I	CCWWGG	1 cut(s)	1040
EcoT38I	GRGCYC	1 cut(s)	479
ErhI	CCWWGG	1 cut(s)	1040
Esp3I	CGTCTC	1 cut(s)	2165
FaeI	CATG	9 cut(s)	212, 260, 395, 878, 923, 1001, 1504, 1769, 1796
FaqI	GGGAC	2 cut(s)	1399, 1945
FatI	CATG	9 cut(s)	208, 256, 391, 874, 919, 997, 1500, 1765, 1792
FokI	GGATG	3 cut(s)	659, 661, 1032
FriOI	GRGCYC	1 cut(s)	479
FspBI	CTAG	5 cut(s)	215, 278, 1041, 1704, 1818
GlaI	GCGC	1 cut(s)	1874
GsaI	CCCAGC	2 cut(s)	359, 747
GsuI	CTGGAG	3 cut(s)	168, 807, 1763
HaeIII	GGCC	4 cut(s)	477, 1039, 1234, 1575
HapII	CCGG	3 cut(s)	154, 1075, 1525
HgaI	GACGC	1 cut(s)	28
HhaI	GCGC	1 cut(s)	1875
Hin1II	CATG	9 cut(s)	212, 260, 395, 878, 923, 1001, 1504, 1769, 1796
Hin6I	GCGC	1 cut(s)	1873
HinP1I	GCGC	1 cut(s)	1873
HincII	GTYRAC	2 cut(s)	835, 1506
HindII	GTYRAC	2 cut(s)	835, 1506
HindIII	AAGCTT	1 cut(s)	2105
HinfI	GANTC	9 cut(s)	36, 159, 205, 749, 765, 792, 1091, 1747, 2035
HpaI	GTTAAC	1 cut(s)	1506
HpaII	CCGG	3 cut(s)	154, 1075, 1525
HphI	GGTGA	5 cut(s)	154, 890, 965, 2002, 2044
Hpy166II	GTNNAC	4 cut(s)	500, 632, 835, 1506
Hpy188I	TCNGA	5 cut(s)	986, 1519, 1543, 1563, 1642
Hpy8I	GTNNAC	4 cut(s)	500, 632, 835, 1506
HpyAV	CCTTC	6 cut(s)	620, 675, 1027, 1062, 1493, 2161
HpyCH4III	ACNGT	4 cut(s)	166, 847, 1220, 1689
HpyCH4IV	ACGT	3 cut(s)	829, 1603, 2148
HpyF3I	CTNAG	3 cut(s)	771, 1134, 1229
HpySE526I	ACGT	3 cut(s)	829, 1603, 2148
Hsp92II	CATG	9 cut(s)	212, 260, 395, 878, 923, 1001, 1504, 1769, 1796
HspAI	GCGC	1 cut(s)	1873
KspAI	GTTAAC	1 cut(s)	1506
Kzo9I	GATC	4 cut(s)	907, 1465, 1538, 2140
LguI	GCTCTTC	1 cut(s)	733
LmnI	GCTCC	2 cut(s)	565, 667
Lsp1109I	GCAGC	9 cut(s)	99, 128, 259, 355, 929, 1345, 1373, 1378, 1452
LweI	GCATC	3 cut(s)	290, 391, 1105
MaeI	CTAG	5 cut(s)	215, 278, 1041, 1704, 1818
MaeII	ACGT	3 cut(s)	829, 1603, 2148
MaeIII	GTNAC	4 cut(s)	589, 878, 1471, 1699
MalI	GATC	4 cut(s)	909, 1467, 1540, 2142
MbiI	CCGCTC	1 cut(s)	1515
MboI	GATC	4 cut(s)	907, 1465, 1538, 2140
MfeI	CAATTG	2 cut(s)	1056, 2111
MhlI	GDGCHC	4 cut(s)	97, 479, 502, 971
MlyI	GAGTC	3 cut(s)	45, 759, 1756
MmeI	TCCRAC	3 cut(s)	226, 1586, 1915
MseI	TTAA	8 cut(s)	809, 1080, 1386, 1457, 1505, 1589, 1658, 1755
MslI	CAYNNNNRTG	3 cut(s)	692, 1404, 1797
MspA1I	CMGCKG	1 cut(s)	141
MspCI	CTTAAG	1 cut(s)	1754
MspI	CCGG	3 cut(s)	154, 1075, 1525
MspR9I	CCNGG	3 cut(s)	154, 1206, 1367
MunI	CAATTG	2 cut(s)	1056, 2111
Mva1269I	GAATGC	1 cut(s)	1838
MvaI	CCWGG	2 cut(s)	1206, 1367
MvnI	CGCG	1 cut(s)	1974
NciI	CCSGG	1 cut(s)	154
NdeII	GATC	4 cut(s)	907, 1465, 1538, 2140
NlaIII	CATG	9 cut(s)	212, 260, 395, 878, 923, 1001, 1504, 1769, 1796
NlaIV	GGNNCC	4 cut(s)	476, 477, 867, 1038
NmuCI	GTSAC	2 cut(s)	878, 1471
NspI	RCATGY	3 cut(s)	260, 1504, 1769
NspV	TTCGAA	2 cut(s)	795, 1669
PasI	CCCWGGG	1 cut(s)	1366
PceI	AGGCCT	1 cut(s)	1234
PciI	ACATGT	1 cut(s)	1765
PciSI	GCTCTTC	1 cut(s)	733
PcsI	WCGNNNNNNNCGW	2 cut(s)	493, 2180
PctI	GAATGC	1 cut(s)	1838
PfeI	GAWTC	6 cut(s)	159, 205, 749, 792, 1091, 2035
PflMI	CCANNNNNTGG	2 cut(s)	875, 1897
PleI	GAGTC	3 cut(s)	44, 759, 1755
PmaCI	CACGTG	1 cut(s)	830
PmlI	CACGTG	1 cut(s)	830
PpsI	GAGTC	3 cut(s)	44, 759, 1755
Ppu21I	YACGTR	2 cut(s)	830, 2149
PpuMI	RGGWCCY	1 cut(s)	1480
PscI	ACATGT	1 cut(s)	1765
PshBI	ATTAAT	2 cut(s)	1386, 1457
Psp5II	RGGWCCY	1 cut(s)	1480
Psp6I	CCWGG	2 cut(s)	1204, 1365
PspCI	CACGTG	1 cut(s)	830
PspFI	CCCAGC	2 cut(s)	355, 743
PspGI	CCWGG	2 cut(s)	1204, 1365
PspN4I	GGNNCC	4 cut(s)	476, 477, 867, 1038
PspOMI	GGGCCC	1 cut(s)	475
PspPI	GGNCC	7 cut(s)	368, 475, 476, 1037, 1480, 1573, 1900
PspPPI	RGGWCCY	1 cut(s)	1480
PsrI	GAACNNNNNNTAC	2 cut(s)	1512, 1544
PstI	CTGCAG	3 cut(s)	736, 1363, 2158
PvuII	CAGCTG	1 cut(s)	141
RsaI	GTAC	2 cut(s)	633, 958
RsaNI	GTAC	2 cut(s)	632, 957
RseI	CAYNNNNRTG	3 cut(s)	692, 1404, 1797
SapI	GCTCTTC	1 cut(s)	733
SaqAI	TTAA	8 cut(s)	809, 1080, 1386, 1457, 1505, 1589, 1658, 1755
Sau3AI	GATC	4 cut(s)	907, 1465, 1538, 2140
Sau96I	GGNCC	7 cut(s)	368, 475, 476, 1037, 1480, 1573, 1900
SbfI	CCTGCAGG	1 cut(s)	736
SchI	GAGTC	3 cut(s)	45, 759, 1756
ScrFI	CCNGG	3 cut(s)	154, 1206, 1367
SdaI	CCTGCAGG	1 cut(s)	736
SduI	GDGCHC	4 cut(s)	97, 479, 502, 971
SfaNI	GCATC	3 cut(s)	290, 391, 1105
SfcI	CTRYAG	4 cut(s)	732, 1245, 1359, 2154
SfuI	TTCGAA	2 cut(s)	795, 1669
SinI	GGWCC	3 cut(s)	368, 1480, 1900
SmiMI	CAYNNNNRTG	3 cut(s)	692, 1404, 1797
SmlI	CTYRAG	4 cut(s)	190, 469, 1192, 1754
SmoI	CTYRAG	4 cut(s)	190, 469, 1192, 1754
Sse8387I	CCTGCAGG	1 cut(s)	736
SseBI	AGGCCT	1 cut(s)	1234
SsiI	CCGC	8 cut(s)	121, 124, 171, 366, 838, 841, 1498, 1513
SspI	AATATT	1 cut(s)	325
SspMI	CTAG	5 cut(s)	215, 278, 1041, 1704, 1818
StuI	AGGCCT	1 cut(s)	1234
StyD4I	CCNGG	3 cut(s)	152, 1204, 1365
StyI	CCWWGG	1 cut(s)	1040
TaaI	ACNGT	4 cut(s)	166, 847, 1220, 1689
TaiI	ACGT	3 cut(s)	832, 1606, 2151
TaqI	TCGA	9 cut(s)	399, 487, 795, 1123, 1486, 1537, 1633, 1669, 2143
TaqII	GACCGA	1 cut(s)	819
TatI	WGTACW	1 cut(s)	631
TauI	GCSGC	4 cut(s)	126, 173, 843, 1515
TfiI	GAWTC	6 cut(s)	159, 205, 749, 792, 1091, 2035
Tru1I	TTAA	8 cut(s)	809, 1080, 1386, 1457, 1505, 1589, 1658, 1755
Tru9I	TTAA	8 cut(s)	809, 1080, 1386, 1457, 1505, 1589, 1658, 1755
TscAI	CASTG	5 cut(s)	21, 324, 775, 850, 1728
TseFI	GTSAC	2 cut(s)	878, 1471
TseI	GCWGC	9 cut(s)	112, 141, 272, 343, 942, 1358, 1361, 1391, 1440
Tsp45I	GTSAC	2 cut(s)	878, 1471
TspDTI	ATGAA	8 cut(s)	14, 237, 408, 665, 1014, 1365, 1821, 1855
TspGWI	ACGGA	1 cut(s)	54
TspRI	CASTG	5 cut(s)	21, 324, 775, 850, 1728
Van91I	CCANNNNNTGG	2 cut(s)	875, 1897
Vha464I	CTTAAG	1 cut(s)	1754
VneI	GTGCAC	1 cut(s)	498
VpaK11BI	GGWCC	3 cut(s)	368, 1480, 1900
VspI	ATTAAT	2 cut(s)	1386, 1457
XapI	RAATTY	4 cut(s)	705, 1101, 1635, 1671
XbaI	TCTAGA	1 cut(s)	1817
XceI	RCATGY	3 cut(s)	260, 1504, 1769
XmaJI	CCTAGG	1 cut(s)	1040
XspI	CTAG	5 cut(s)	215, 278, 1041, 1704, 1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.