Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0009007

Physical Location & Seq

Genomic Coordinates Reverse (-)

2460266 .. 2463350

Gene Structure 3085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1030500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGCCCCATTTGACGAGACTAAAGAGATCCAATCAGCTTACTGAAATTCCTCTAAAGCTAAAATATTCTTTCATTAACGCCTTTAAATTGTCCAGCCAAATTCTACCGGCATCAGAAACCAACATTGAAATTGATACGATCACCAGAATAATTAACAACCATCCTTATCCTGATCAACCACTTCAACCAACTCTTCTCCAGCACATCCCACCGCAAGTTCTTTCCACCAGTTTTGTGGAGAATGTTCTTGGTCACCTTTTCGCAGCCCATTCCAATGGTCTTAAAGCCCTTGAGTTCTTCGATTATTCCCTCAATCATTCCCAGTTATGTCCAAGCTCGGACGGTTTTGAAAAGATGCTGCACATCCTTACCAGGATGCGTTATTTTGATAAAGCTTGGGAGTTGATGGCCAAAATAAGCAGGATGCACCCGTCCTTGCTTACCCTTAAGTCAATGAGCATCATTCTGTCGAAAATAGCAAAATTTCAATCGTATGAAGATGTCCTTGAAGCATTTGAAAAACTGGAGAATGATATTTTCGCTGGGAGGAAGTTTGGTACTGATGAGTTCAATGTACTCCTCAGAGCATTTTGCACCGAAAGGCAGATGAAGGAGGCACGTTCAGTGTTCATGAAGATGTGTTCTCGCTTTTCACCCAACACCAAGACCATGAATATCTTGCTCCTGGGGTTCAAGGAATCAGGAGATATTACTGCAATAGAACTCTTCTACCATGAACTGGTTAGAAGAGGCTTTAAGCCAAATAGTATAACTTATAACATTAGAATCGATGCGTATTGTAAGAAAGGTTGCTTTGCTGATGGATTGAGACTTTTTGAGGGAATGGAACGGGAAAACTTATCGCCTACTTTAGAAACAATCACCACACTGATCCATGGAGCAGGGGTTGCTCGAAATCCAATCAAGGCACGACAGTTATTTGATGAGATTCGCTTGAGAAATTTGCTTCCGGACACTGGGGCTTACAATGCTTTGATGAGTTCACTTATTAGATCAAGAGATCTGAGGTCGGCAGTCGCCTTGATGGATGAGATGGAAAAGAATCATATTGAGCATGATGATATGACTTACCACACCGTCTTCTCTGGCTTGATGAGGACATATGATATCGAAGGCGTTTCCAGACTATATCACAAAATGGTTGATAGGAGTTTTGTGCCCAAAACACGAACGGTGGTGATGATAATGAAATTTTTCTGTGTAAATCATCAGCTTGATTCGGGTTTGCATTTGTGGCGATACCTAGTGGGGAAAGGATATTGTCCTCACGGTCATGCATTGGACCTTCTGTTAACGGGATTGTGCTCCCGCGGTAGGGTAAACGAAGCTTTTGATTGCTCCACACAGATGGTGGAGAGAGGGAGACGTATGAGTGAAGCTTCATTACGGACATTGGAAAGCTTTCTGGTTCAGGAAGGTGAGATGGAGAAGCTGAGGAAGCTGAAGCAGACGATAAGGAAATTGCATACCCTGTTGCCCCCAGGAAAAGGGCATACGATCGCTGATCCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

512

Amino Acids

58.69

Weight (kDa)

9.1

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 231	6.2e-07	PPR repeat family
PPR_2	PF13041	219 - 268	8.5e-11	PPR repeat family
PPR_1	PF12854	250 - 283	5.3e-07	PPR repeat
PPR_2	PF13041	254 - 300	5.5e-11	PPR repeat family
PPR	PF01535	257 - 286	7.6e-06	PPR repeat
PPR_long	PF17177	268 - 408	1.3e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	324 - 372	2.1e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61360
fragaria_vesca	FvH4_7g04300 FvH4_7g04300 FvH4_7g04300 FvH4_7g04300
malus_domestica	MD03G1030500.v1.1 MD11G1035500.v1.1
prunus_persica	Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1
pyrus_communis	pycom11g02950
rosa_chinensis	RchiOBHm_Chr1g0329261
rosa_laevigata	RLG00000029906
rosa_multiflora	Rmu_sc0035610.1_g000001
rosa_roxburghii	Rroxscaffold_4G00321250
rosa_rugosa	Rorug01G0077600
rosa_samantha	Rh1AG096500 Rh1BG077200 Rh1CG093200 Rh1DG099900
rosa_wichuraiana	Rw1G007470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	777
AccB7I	CCANNNNNTGG	1 cut(s)	739
AccII	CGCG	1 cut(s)	1332
AccIII	TCCGGA	1 cut(s)	970
AciI	CCGC	3 cut(s)	212, 1330, 1332
AclWI	GGATC	3 cut(s)	21, 886, 1520
AcoI	YGGCCR	1 cut(s)	408
AcsI	RAATTY	5 cut(s)	45, 99, 482, 961, 1211
AcuI	CTGAAG	1 cut(s)	1484
AfaI	GTAC	2 cut(s)	559, 576
AfiI	CCNNNNNNNGG	5 cut(s)	739, 977, 1335, 1336, 1508
AflII	CTTAAG	1 cut(s)	446
AgsI	TTSAA	8 cut(s)	128, 185, 350, 488, 509, 518, 571, 694
AjnI	CCWGG	3 cut(s)	371, 684, 1501
Alw21I	GWGCWC	1 cut(s)	1328
Alw26I	GTCTC	3 cut(s)	10, 823, 1378
AlwI	GGATC	3 cut(s)	21, 886, 1520
Aor13HI	TCCGGA	1 cut(s)	970
AoxI	GGCC	1 cut(s)	408
ApeKI	GCWGC	2 cut(s)	263, 358
ApoI	RAATTY	5 cut(s)	45, 99, 482, 961, 1211
Asp700I	GAANNNNTTC	2 cut(s)	1214, 1422
AspS9I	GGNCC	1 cut(s)	1303
AsuHPI	GGTGA	6 cut(s)	133, 245, 645, 874, 1210, 1451
AvaII	GGWCC	1 cut(s)	1303
BaeGI	GKGCMC	1 cut(s)	1182
BalI	TGGCCA	1 cut(s)	410
BarI	GAAGNNNNNNTAC	2 cut(s)	1389, 1421
BbsI	GAAGAC	1 cut(s)	1093
Bbv12I	GWGCWC	1 cut(s)	1328
BbvCI	CCTCAGC	1 cut(s)	1454
BbvI	GCAGC	2 cut(s)	275, 345
BccI	CCATC	7 cut(s)	168, 400, 815, 1039, 1048, 1363, 1438
BciT130I	CCWGG	3 cut(s)	373, 686, 1503
BclI	TGATCA	1 cut(s)	172
BcoDI	GTCTC	3 cut(s)	10, 823, 1378
BfaI	CTAG	1 cut(s)	1265
BfrI	CTTAAG	1 cut(s)	446
BglII	AGATCT	1 cut(s)	1021
BisI	GCNGC	2 cut(s)	264, 359
BlsI	GCNGC	2 cut(s)	265, 360
Bme1390I	CCNGG	3 cut(s)	373, 686, 1503
Bme18I	GGWCC	1 cut(s)	1303
BmgT120I	GGNCC	1 cut(s)	1303
BmrFI	CCNGG	3 cut(s)	373, 686, 1503
BmrI	ACTGGG	2 cut(s)	316, 987
BmsI	GCATC	6 cut(s)	119, 345, 366, 414, 468, 781
BmuI	ACTGGG	2 cut(s)	316, 987
BpiI	GAAGAC	1 cut(s)	1093
BpmI	CTGGAG	2 cut(s)	182, 545
Bpu10I	CCTNAGC	1 cut(s)	1454
BpuEI	CTTGAG	2 cut(s)	311, 976
Bsa29I	ATCGAT	1 cut(s)	789
BsaJI	CCNNGG	4 cut(s)	685, 895, 1330, 1501
BsaWI	WCCGGW	1 cut(s)	970
BsaXI	ACNNNNNCTCC	2 cut(s)	891, 921
Bsc4I	CCNNNNNNNGG	5 cut(s)	739, 977, 1335, 1336, 1508
Bse118I	RCCGGY	1 cut(s)	106
Bse1I	ACTGG	5 cut(s)	228, 322, 528, 744, 982
BseAI	TCCGGA	1 cut(s)	970
BseBI	CCWGG	3 cut(s)	373, 686, 1503
BseCI	ATCGAT	1 cut(s)	789
BseDI	CCNNGG	4 cut(s)	685, 895, 1330, 1501
BseGI	GGATG	6 cut(s)	160, 204, 363, 381, 429, 1054
BseLI	CCNNNNNNNGG	5 cut(s)	739, 977, 1335, 1336, 1508
BseMII	CTCAG	3 cut(s)	595, 1016, 1445
BseNI	ACTGG	5 cut(s)	228, 322, 528, 744, 982
BseRI	GAGGAG	1 cut(s)	569
BseSI	GKGCMC	1 cut(s)	1182
BseXI	GCAGC	2 cut(s)	275, 345
BseYI	CCCAGC	1 cut(s)	542
BsgI	GTGCAG	1 cut(s)	344
Bsh1236I	CGCG	1 cut(s)	1332
Bsh1285I	CGRYCG	1 cut(s)	1521
BshFI	GGCC	1 cut(s)	410
BshVI	ATCGAT	1 cut(s)	789
BsiEI	CGRYCG	1 cut(s)	1521
BsiHKAI	GWGCWC	1 cut(s)	1328
BsiSI	CCGG	2 cut(s)	107, 971
BslI	CCNNNNNNNGG	5 cut(s)	739, 977, 1335, 1336, 1508
BsmAI	GTCTC	3 cut(s)	10, 823, 1378
BsmBI	CGTCTC	1 cut(s)	1378
BsnI	GGCC	1 cut(s)	410
Bsp1286I	GDGCHC	2 cut(s)	1182, 1328
Bsp13I	TCCGGA	1 cut(s)	970
Bsp143I	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
Bsp19I	CCATGG	1 cut(s)	895
BspACI	CCGC	3 cut(s)	212, 1330, 1332
BspANI	GGCC	1 cut(s)	410
BspCNI	CTCAG	3 cut(s)	594, 1017, 1446
BspDI	ATCGAT	1 cut(s)	789
BspEI	TCCGGA	1 cut(s)	970
BspFNI	CGCG	1 cut(s)	1332
BspHI	TCATGA	1 cut(s)	630
BspPI	GGATC	3 cut(s)	21, 886, 1520
BspTI	CTTAAG	1 cut(s)	446
BsrFI	RCCGGY	1 cut(s)	106
BsrI	ACTGG	5 cut(s)	228, 322, 528, 744, 982
BssAI	RCCGGY	1 cut(s)	106
BssECI	CCNNGG	4 cut(s)	685, 895, 1330, 1501
BssMI	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
BssT1I	CCWWGG	1 cut(s)	895
Bst2UI	CCWGG	3 cut(s)	373, 686, 1503
Bst4CI	ACNGT	5 cut(s)	344, 936, 1099, 1195, 1292
Bst6I	CTCTTC	3 cut(s)	198, 731, 742
BstAFI	CTTAAG	1 cut(s)	446
BstAPI	GCANNNNNTGC	1 cut(s)	908
BstDEI	CTNAG	3 cut(s)	581, 1025, 1454
BstDSI	CCRYGG	2 cut(s)	895, 1330
BstEII	GGTNACC	1 cut(s)	251
BstF5I	GGATG	6 cut(s)	160, 204, 363, 381, 429, 1054
BstFNI	CGCG	1 cut(s)	1332
BstKTI	GATC	8 cut(s)	29, 141, 175, 894, 1016, 1024, 1521, 1528
BstMAI	GTCTC	3 cut(s)	10, 823, 1378
BstMBI	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
BstMCI	CGRYCG	1 cut(s)	1521
BstMWI	GCNNNNNNNGC	5 cut(s)	908, 989, 1255, 1459, 1529
BstNI	CCWGG	3 cut(s)	373, 686, 1503
BstPI	GGTNACC	1 cut(s)	251
BstSCI	CCNGG	3 cut(s)	371, 684, 1501
BstSLI	GKGCMC	1 cut(s)	1182
BstUI	CGCG	1 cut(s)	1332
BstV1I	GCAGC	2 cut(s)	275, 345
BstV2I	GAAGAC	1 cut(s)	1093
BstX2I	RGATCY	2 cut(s)	26, 1021
BstXI	CCANNNNNNTGG	3 cut(s)	235, 275, 1369
BstYI	RGATCY	2 cut(s)	26, 1021
Bsu15I	ATCGAT	1 cut(s)	789
BsuRI	GGCC	1 cut(s)	410
BsuTUI	ATCGAT	1 cut(s)	789
BtgI	CCRYGG	2 cut(s)	895, 1330
BtsCI	GGATG	6 cut(s)	160, 204, 363, 381, 429, 1054
BtsIMutI	CAGTG	3 cut(s)	630, 887, 975
CciI	TCATGA	1 cut(s)	630
Cfr10I	RCCGGY	1 cut(s)	106
Cfr13I	GGNCC	1 cut(s)	1303
Cfr42I	CCGCGG	1 cut(s)	1333
ClaI	ATCGAT	1 cut(s)	789
Csp6I	GTAC	2 cut(s)	558, 575
CspCI	CAANNNNNGTGG	2 cut(s)	214, 249
CviAII	CATG	6 cut(s)	631, 670, 734, 896, 1076, 1295
CviQI	GTAC	2 cut(s)	558, 575
DdeI	CTNAG	3 cut(s)	581, 1025, 1454
DpnI	GATC	8 cut(s)	28, 140, 174, 893, 1015, 1023, 1520, 1527
DpnII	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
DraI	TTTAAA	1 cut(s)	85
EaeI	YGGCCR	1 cut(s)	408
Eam1104I	CTCTTC	3 cut(s)	198, 731, 742
EarI	CTCTTC	3 cut(s)	198, 731, 742
Eco130I	CCWWGG	1 cut(s)	895
Eco32I	GATATC	1 cut(s)	1129
Eco47I	GGWCC	1 cut(s)	1303
Eco57I	CTGAAG	1 cut(s)	1484
Eco91I	GGTNACC	1 cut(s)	251
EcoO65I	GGTNACC	1 cut(s)	251
EcoRII	CCWGG	3 cut(s)	371, 684, 1501
EcoRV	GATATC	1 cut(s)	1129
EcoT14I	CCWWGG	1 cut(s)	895
EcoT22I	ATGCAT	1 cut(s)	1300
ErhI	CCWWGG	1 cut(s)	895
Esp3I	CGTCTC	1 cut(s)	1378
FaeI	CATG	6 cut(s)	634, 673, 737, 899, 1079, 1298
FalI	AAGNNNNNCTT	2 cut(s)	489, 521
FatI	CATG	6 cut(s)	630, 669, 733, 895, 1075, 1294
FauI	CCCGC	1 cut(s)	1337
FauNDI	CATATG	1 cut(s)	1123
FbaI	TGATCA	1 cut(s)	172
Fnu4HI	GCNGC	2 cut(s)	264, 359
FokI	GGATG	6 cut(s)	147, 191, 350, 388, 436, 1061
Fsp4HI	GCNGC	2 cut(s)	264, 359
FspBI	CTAG	1 cut(s)	1265
GluI	GCNGC	2 cut(s)	264, 359
GsaI	CCCAGC	1 cut(s)	546
GsuI	CTGGAG	2 cut(s)	182, 545
HaeIII	GGCC	1 cut(s)	410
HapII	CCGG	2 cut(s)	107, 971
Hin1II	CATG	6 cut(s)	634, 673, 737, 899, 1079, 1298
HincII	GTYRAC	1 cut(s)	1314
HindII	GTYRAC	1 cut(s)	1314
HindIII	AAGCTT	4 cut(s)	393, 1347, 1398, 1420
HinfI	GANTC	5 cut(s)	698, 786, 949, 1063, 1238
HpaI	GTTAAC	1 cut(s)	1314
HpaII	CCGG	2 cut(s)	107, 971
HphI	GGTGA	6 cut(s)	133, 245, 645, 874, 1210, 1451
Hpy166II	GTNNAC	3 cut(s)	1004, 1314, 1342
Hpy188I	TCNGA	4 cut(s)	115, 340, 584, 1026
Hpy188III	TCNNGA	7 cut(s)	170, 631, 702, 971, 1017, 1143, 1433
Hpy8I	GTNNAC	3 cut(s)	1004, 1314, 1342
HpyAV	CCTTC	4 cut(s)	604, 1127, 1316, 1430
HpyCH4III	ACNGT	5 cut(s)	344, 936, 1099, 1195, 1292
HpyCH4IV	ACGT	2 cut(s)	619, 1387
HpyCH4V	TGCA	8 cut(s)	361, 427, 594, 716, 1249, 1298, 1486, 1532
HpyF10VI	GCNNNNNNNGC	5 cut(s)	908, 989, 1255, 1459, 1529
HpyF3I	CTNAG	3 cut(s)	581, 1025, 1454
HpySE526I	ACGT	2 cut(s)	619, 1387
Hsp92II	CATG	6 cut(s)	634, 673, 737, 899, 1079, 1298
Kpn2I	TCCGGA	1 cut(s)	970
Ksp22I	TGATCA	1 cut(s)	172
KspAI	GTTAAC	1 cut(s)	1314
KspI	CCGCGG	1 cut(s)	1333
Kzo9I	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
LmnI	GCTCC	4 cut(s)	687, 899, 1331, 1364
Lsp1109I	GCAGC	2 cut(s)	275, 345
LweI	GCATC	6 cut(s)	119, 345, 366, 414, 468, 781
MaeI	CTAG	1 cut(s)	1265
MaeII	ACGT	2 cut(s)	619, 1387
MaeIII	GTNAC	1 cut(s)	251
MalI	GATC	8 cut(s)	28, 140, 174, 893, 1015, 1023, 1520, 1527
MboI	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
MboII	GAAGA	7 cut(s)	185, 289, 509, 646, 718, 759, 1093
MflI	RGATCY	2 cut(s)	26, 1021
MhlI	GDGCHC	2 cut(s)	1182, 1328
MlsI	TGGCCA	1 cut(s)	410
MluCI	AATT	9 cut(s)	45, 86, 99, 129, 150, 482, 961, 1211, 1481
MluNI	TGGCCA	1 cut(s)	410
Mox20I	TGGCCA	1 cut(s)	410
Mph1103I	ATGCAT	1 cut(s)	1300
MroI	TCCGGA	1 cut(s)	970
MroXI	GAANNNNTTC	2 cut(s)	1214, 1422
MscI	TGGCCA	1 cut(s)	410
MseI	TTAA	7 cut(s)	75, 84, 153, 282, 447, 756, 1313
MslI	CAYNNNNRTG	4 cut(s)	273, 635, 1293, 1367
Msp20I	TGGCCA	1 cut(s)	410
MspA1I	CMGCKG	1 cut(s)	1332
MspCI	CTTAAG	1 cut(s)	446
MspI	CCGG	2 cut(s)	107, 971
MspR9I	CCNGG	3 cut(s)	373, 686, 1503
MvaI	CCWGG	3 cut(s)	373, 686, 1503
MvnI	CGCG	1 cut(s)	1332
MwoI	GCNNNNNNNGC	5 cut(s)	908, 989, 1255, 1459, 1529
NcoI	CCATGG	1 cut(s)	895
NdeI	CATATG	1 cut(s)	1123
NdeII	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
NlaIII	CATG	6 cut(s)	634, 673, 737, 899, 1079, 1298
NmuCI	GTSAC	1 cut(s)	251
NsiI	ATGCAT	1 cut(s)	1300
PagI	TCATGA	1 cut(s)	630
PdmI	GAANNNNTTC	2 cut(s)	1214, 1422
PfeI	GAWTC	5 cut(s)	698, 786, 949, 1063, 1238
PflMI	CCANNNNNTGG	1 cut(s)	739
PkrI	GCNGC	2 cut(s)	265, 360
Ple19I	CGATCG	1 cut(s)	1521
PsiI	TTATAA	1 cut(s)	777
Psp6I	CCWGG	3 cut(s)	371, 684, 1501
PspEI	GGTNACC	1 cut(s)	251
PspFI	CCCAGC	1 cut(s)	542
PspGI	CCWGG	3 cut(s)	371, 684, 1501
PspPI	GGNCC	1 cut(s)	1303
PsuI	RGATCY	2 cut(s)	26, 1021
PvuI	CGATCG	1 cut(s)	1521
RsaI	GTAC	2 cut(s)	559, 576
RsaNI	GTAC	2 cut(s)	558, 575
RseI	CAYNNNNRTG	4 cut(s)	273, 635, 1293, 1367
SacII	CCGCGG	1 cut(s)	1333
SaqAI	TTAA	7 cut(s)	75, 84, 153, 282, 447, 756, 1313
SatI	GCNGC	2 cut(s)	264, 359
Sau3AI	GATC	8 cut(s)	26, 138, 172, 891, 1013, 1021, 1518, 1525
Sau96I	GGNCC	1 cut(s)	1303
ScrFI	CCNGG	3 cut(s)	373, 686, 1503
SduI	GDGCHC	2 cut(s)	1182, 1328
SfaNI	GCATC	6 cut(s)	119, 345, 366, 414, 468, 781
Sfr303I	CCGCGG	1 cut(s)	1333
SgrBI	CCGCGG	1 cut(s)	1333
SinI	GGWCC	1 cut(s)	1303
SmiMI	CAYNNNNRTG	4 cut(s)	273, 635, 1293, 1367
SmlI	CTYRAG	3 cut(s)	290, 446, 955
SmoI	CTYRAG	3 cut(s)	290, 446, 955
Sse9I	AATT	9 cut(s)	45, 86, 99, 129, 150, 482, 961, 1211, 1481
SsiI	CCGC	3 cut(s)	212, 1330, 1332
SspI	AATATT	1 cut(s)	65
SspMI	CTAG	1 cut(s)	1265
StyD4I	CCNGG	3 cut(s)	371, 684, 1501
StyI	CCWWGG	1 cut(s)	895
TaaI	ACNGT	5 cut(s)	344, 936, 1099, 1195, 1292
TaiI	ACGT	2 cut(s)	622, 1390
TaqI	TCGA	5 cut(s)	300, 470, 789, 913, 1131
TasI	AATT	9 cut(s)	45, 86, 99, 129, 150, 482, 961, 1211, 1481
TatI	WGTACW	1 cut(s)	574
TfiI	GAWTC	5 cut(s)	698, 786, 949, 1063, 1238
Tru1I	TTAA	7 cut(s)	75, 84, 153, 282, 447, 756, 1313
Tru9I	TTAA	7 cut(s)	75, 84, 153, 282, 447, 756, 1313
TscAI	CASTG	3 cut(s)	630, 894, 982
TseFI	GTSAC	1 cut(s)	251
TseI	GCWGC	2 cut(s)	263, 358
Tsp45I	GTSAC	1 cut(s)	251
TspDTI	ATGAA	9 cut(s)	61, 510, 619, 623, 647, 686, 750, 1223, 1392
TspGWI	ACGGA	1 cut(s)	1423
TspRI	CASTG	3 cut(s)	630, 894, 982
Van91I	CCANNNNNTGG	1 cut(s)	739
Vha464I	CTTAAG	1 cut(s)	446
VpaK11BI	GGWCC	1 cut(s)	1303
XapI	RAATTY	5 cut(s)	45, 99, 482, 961, 1211
XcmI	CCANNNNNNNNNTGG	2 cut(s)	232, 1369
XmnI	GAANNNNTTC	2 cut(s)	1214, 1422
XspI	CTAG	1 cut(s)	1265
Zsp2I	ATGCAT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.