Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009007

Physical Location & Seq

Genomic Coordinates Reverse (-)

3108433 .. 3110218

Gene Structure 1786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1035500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGCTCCATTTGACGAGACTAAAGATATCCAATCAGCTTACTGAAATTCCTCAAAAGCTAAATTTTTCTGTCATTAACGCCCTTAAATTATCCAGCCAAATACATCCGTTGTCAGAATCCAGCATTGAAATTGATACAATCACCAGAATAATTAACAACCATCCTTACCCTGATCAACCACTTCAACCGACTCTTCTCCAGCGCATCCCACCACAAGTTCTTTCCACCAGTTTTGTGGAGAACGTTCTTGGTCACCTTTTCGCAGCCCATTCCAATGGTCTTAAAGCCCTTGAATTCTTCAACTATTTCCTCAGTCATTCCCAGTTATGTCCAAGCTCAGACGCTTTTGAAAAGATGCTGCACATCCTTACCAGGATGCGTTATTTTGATAAAGCGTGGGAGTTGATGGCAAAAATAAGCAGGATGCACCCTTCCTTGCTTACCCTTAAGTCAATGAGCATCATTCTGTCAAAAATAGCAAAATTCAAATCGTATGAAGATGTCCTTGAAGCATTTGAAAAATTGGAGAATGATATTTTCGCTGAGAGGAAGTTTGGTACTGATGAGTTCAATGTACTCCTCAGAGCATTTTGCACAGAAAGGCAGATGAAAGAGGCACGTTCAGTGTTCATGAAGATGCGTTCTCGCTTTCCACCCAACACGAAGACCATGAACATTTTGCTCCTAGGGTTCAAGGAATCAGGAGATATTACTGCAATAGAACTCTTCTACCATGAACTGGTTAAAAGAGGCTTTAAGCCAAATAGTATAACTTATAACATTAGAATTGATGCTTACTGTAAAAAAGGTTGCTTCGCTGATGGATTGAGACTTTTTGAAGGAATGGAACGGGAAAACTTGTCACCTACGTTGGAAACAATCACTACACTGATCCATGGAGCAGGGGTTGTTCGAAATCCAATCAAGGCACGGCAGTTATTTGATGAGATTCGCTTGAGAAACTTGCTTCCAGACACTGGCTCTTATAATGCTTTGATGAGTTCACTTATTAGATCAAGACATCTGAAGTCAGCGGTCGCCTTGATGGATGAGATGGAAGAGAATCATATTGAGCAGGACGATATGACATACCACACCATATTCTCTGGCTTGATGAGGACGTCTGATATTGAAGGCGTTTCTAGGCTATATCACAAAATGGTTGATAGAAGTTTCGTGCCCAAAACACGAACGGTTGTGATGATATTAAAATTTTTCTGTGTAAACCATCAGCTTGATTTGGGTTTGCATTTGTGGCGATACCTAGTGGAGAAAGGATATTGTCCTCACAGTCATGCATTGGACCTTCTGGTAACGGGATTGTGCTCCCGGGGTAGGGTAAACGAAGCTTTTGAGTGCTCTACACAAATGGTGGGGAGGGGTAGACATATGAGCGAAGCATCGTTTCGGACATTGGAGAGCTTGCTGCTTCAGGAAGGTGAGATGGACAAGCTGAGGAAGCTGAAGCAGATGATAAAGAAACTGCAGAACATGTTGCCCCAAGTAAAAGGGCATACCATTGCAGATCCTGCACTTTCAGACACAGAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

518

Amino Acids

59.51

Weight (kDa)

8.91

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 231	3.1e-07	PPR repeat family
PPR_2	PF13041	219 - 268	4.4e-11	PPR repeat family
PPR_1	PF12854	250 - 283	5.4e-07	PPR repeat
PPR_2	PF13041	254 - 300	5.6e-11	PPR repeat family
PPR	PF01535	257 - 286	7.7e-06	PPR repeat
PPR_long	PF17177	268 - 408	9.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	324 - 372	3e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61360
fragaria_vesca	FvH4_7g04300 FvH4_7g04300 FvH4_7g04300 FvH4_7g04300
malus_domestica	MD03G1030500.v1.1 MD11G1035500.v1.1
prunus_persica	Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1 Prupe.2G028200_v2.0.a1
pyrus_communis	pycom11g02950
rosa_chinensis	RchiOBHm_Chr1g0329261
rosa_laevigata	RLG00000029906
rosa_multiflora	Rmu_sc0035610.1_g000001
rosa_roxburghii	Rroxscaffold_4G00321250
rosa_rugosa	Rorug01G0077600
rosa_samantha	Rh1AG096500 Rh1BG077200 Rh1CG093200 Rh1DG099900
rosa_wichuraiana	Rw1G007470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	777, 987
AatII	GACGTC	1 cut(s)	1124
AccB7I	CCANNNNNTGG	2 cut(s)	739, 977
AccI	GTMKAC	1 cut(s)	1384
AciI	CCGC	1 cut(s)	1034
AclI	AACGTT	1 cut(s)	243
AclWI	GGATC	2 cut(s)	886, 1520
AcsI	RAATTY	5 cut(s)	45, 61, 293, 482, 1211
AcuI	CTGAAG	3 cut(s)	1046, 1415, 1484
AcyI	GRCGYC	1 cut(s)	1121
AfaI	GTAC	2 cut(s)	559, 576
AfiI	CCNNNNNNNGG	4 cut(s)	739, 977, 1335, 1336
AflII	CTTAAG	1 cut(s)	446
AflIII	ACRYGT	1 cut(s)	1491
AjnI	CCWGG	1 cut(s)	371
AluBI	AGCT	8 cut(s)	37, 58, 336, 1234, 1349, 1422, 1453, 1462
AluI	AGCT	8 cut(s)	37, 58, 336, 1234, 1349, 1422, 1453, 1462
Alw21I	GWGCWC	2 cut(s)	1328, 1361
Alw26I	GTCTC	2 cut(s)	10, 823
AlwI	GGATC	2 cut(s)	886, 1520
AlwNI	CAGNNNCTG	2 cut(s)	977, 1529
Ama87I	CYCGRG	1 cut(s)	1329
ApeKI	GCWGC	3 cut(s)	263, 358, 1426
ApoI	RAATTY	5 cut(s)	45, 61, 293, 482, 1211
AspA2I	CCTAGG	1 cut(s)	685
AspLEI	GCGC	1 cut(s)	204
AspS9I	GGNCC	1 cut(s)	1303
AsuC2I	CCSGG	2 cut(s)	1330, 1331
AsuHPI	GGTGA	4 cut(s)	133, 245, 855, 1451
AsuII	TTCGAA	1 cut(s)	913
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	1 cut(s)	1303
AvrII	CCTAGG	1 cut(s)	685
BaeGI	GKGCMC	1 cut(s)	1182
BbsI	GAAGAC	1 cut(s)	671
Bbv12I	GWGCWC	2 cut(s)	1328, 1361
BbvCI	CCTCAGC	1 cut(s)	1454
BbvI	GCAGC	3 cut(s)	275, 345, 1413
BccI	CCATC	7 cut(s)	168, 400, 815, 1039, 1048, 1236, 1438
BceAI	ACGGC	1 cut(s)	947
BciT130I	CCWGG	1 cut(s)	373
BclI	TGATCA	1 cut(s)	172
BcnI	CCSGG	2 cut(s)	1330, 1331
BcoDI	GTCTC	2 cut(s)	10, 823
BfaI	CTAG	3 cut(s)	686, 1143, 1265
BfmI	CTRYAG	1 cut(s)	1484
BfrI	CTTAAG	1 cut(s)	446
BisI	GCNGC	3 cut(s)	264, 359, 1427
BlnI	CCTAGG	1 cut(s)	685
BlsI	GCNGC	3 cut(s)	265, 360, 1428
Bme1390I	CCNGG	3 cut(s)	373, 1330, 1331
Bme18I	GGWCC	1 cut(s)	1303
BmeT110I	CYCGRG	1 cut(s)	1329
BmgT120I	GGNCC	1 cut(s)	1303
BmrFI	CCNGG	3 cut(s)	373, 1330, 1331
BmrI	ACTGGG	1 cut(s)	316
BmsI	GCATC	8 cut(s)	213, 345, 366, 414, 468, 627, 781, 1409
BmuI	ACTGGG	1 cut(s)	316
BpiI	GAAGAC	1 cut(s)	671
BpmI	CTGGAG	1 cut(s)	182
Bpu10I	CCTNAGC	1 cut(s)	1454
Bpu14I	TTCGAA	1 cut(s)	913
BpuEI	CTTGAG	1 cut(s)	976
BpuMI	CCSGG	2 cut(s)	1330, 1331
BsaHI	GRCGYC	1 cut(s)	1121
BsaJI	CCNNGG	4 cut(s)	685, 895, 1329, 1330
BsaXI	ACNNNNNCTCC	2 cut(s)	891, 921
Bsc4I	CCNNNNNNNGG	4 cut(s)	739, 977, 1335, 1336
Bse1I	ACTGG	4 cut(s)	228, 322, 744, 982
Bse3DI	GCAATG	1 cut(s)	1518
BseBI	CCWGG	1 cut(s)	373
BseDI	CCNNGG	4 cut(s)	685, 895, 1329, 1330
BseGI	GGATG	7 cut(s)	103, 160, 204, 363, 381, 429, 1054
BseLI	CCNNNNNNNGG	4 cut(s)	739, 977, 1335, 1336
BseMI	GCAATG	1 cut(s)	1518
BseMII	CTCAG	5 cut(s)	325, 351, 534, 595, 1445
BseNI	ACTGG	4 cut(s)	228, 322, 744, 982
BseRI	GAGGAG	1 cut(s)	569
BseSI	GKGCMC	1 cut(s)	1182
BseXI	GCAGC	3 cut(s)	275, 345, 1413
BsgI	GTGCAG	2 cut(s)	344, 1515
Bsh1285I	CGRYCG	1 cut(s)	1038
BsiEI	CGRYCG	1 cut(s)	1038
BsiHKAI	GWGCWC	2 cut(s)	1328, 1361
BsiHKCI	CYCGRG	1 cut(s)	1329
BsiSI	CCGG	1 cut(s)	1330
BslI	CCNNNNNNNGG	4 cut(s)	739, 977, 1335, 1336
BsmAI	GTCTC	2 cut(s)	10, 823
BsoBI	CYCGRG	1 cut(s)	1329
Bsp119I	TTCGAA	1 cut(s)	913
Bsp1286I	GDGCHC	3 cut(s)	1182, 1328, 1361
Bsp143I	GATC	4 cut(s)	172, 891, 1013, 1525
Bsp19I	CCATGG	1 cut(s)	895
BspACI	CCGC	1 cut(s)	1034
BspCNI	CTCAG	5 cut(s)	324, 350, 535, 594, 1446
BspHI	TCATGA	1 cut(s)	630
BspMAI	CTGCAG	1 cut(s)	1488
BspPI	GGATC	2 cut(s)	886, 1520
BspT104I	TTCGAA	1 cut(s)	913
BspTI	CTTAAG	1 cut(s)	446
BsrDI	GCAATG	1 cut(s)	1518
BsrI	ACTGG	4 cut(s)	228, 322, 744, 982
BssECI	CCNNGG	4 cut(s)	685, 895, 1329, 1330
BssMI	GATC	4 cut(s)	172, 891, 1013, 1525
BssNI	GRCGYC	1 cut(s)	1121
BssT1I	CCWWGG	2 cut(s)	685, 895
Bst2UI	CCWGG	1 cut(s)	373
Bst4CI	ACNGT	3 cut(s)	800, 1195, 1292
Bst6I	CTCTTC	3 cut(s)	198, 731, 1053
BstACI	GRCGYC	1 cut(s)	1121
BstAFI	CTTAAG	1 cut(s)	446
BstAPI	GCANNNNNTGC	1 cut(s)	1529
BstBI	TTCGAA	1 cut(s)	913
BstC8I	GCNNGC	1 cut(s)	1424
BstDEI	CTNAG	5 cut(s)	311, 337, 543, 581, 1454
BstDSI	CCRYGG	1 cut(s)	895
BstEII	GGTNACC	1 cut(s)	251
BstF5I	GGATG	7 cut(s)	103, 160, 204, 363, 381, 429, 1054
BstHHI	GCGC	1 cut(s)	204
BstKTI	GATC	4 cut(s)	175, 894, 1016, 1528
BstMAI	GTCTC	2 cut(s)	10, 823
BstMBI	GATC	4 cut(s)	172, 891, 1013, 1525
BstMCI	CGRYCG	1 cut(s)	1038
BstMWI	GCNNNNNNNGC	3 cut(s)	1255, 1459, 1529
BstNI	CCWGG	1 cut(s)	373
BstNSI	RCATGY	1 cut(s)	1495
BstPI	GGTNACC	1 cut(s)	251
BstSCI	CCNGG	3 cut(s)	371, 1328, 1329
BstSFI	CTRYAG	1 cut(s)	1484
BstSLI	GKGCMC	1 cut(s)	1182
BstV1I	GCAGC	3 cut(s)	275, 345, 1413
BstV2I	GAAGAC	1 cut(s)	671
BstX2I	RGATCY	1 cut(s)	1525
BstXI	CCANNNNNNTGG	2 cut(s)	235, 275
BstYI	RGATCY	1 cut(s)	1525
BtgI	CCRYGG	1 cut(s)	895
BtsCI	GGATG	7 cut(s)	103, 160, 204, 363, 381, 429, 1054
BtsIMutI	CAGTG	3 cut(s)	630, 887, 975
Cac8I	GCNNGC	1 cut(s)	1424
CaiI	CAGNNNCTG	2 cut(s)	977, 1529
CciI	TCATGA	1 cut(s)	630
CfoI	GCGC	1 cut(s)	204
Cfr13I	GGNCC	1 cut(s)	1303
Cfr9I	CCCGGG	1 cut(s)	1329
CseI	GACGC	1 cut(s)	350
Csp6I	GTAC	2 cut(s)	558, 575
CspCI	CAANNNNNGTGG	2 cut(s)	214, 249
CviAII	CATG	6 cut(s)	631, 670, 734, 896, 1295, 1492
CviQI	GTAC	2 cut(s)	558, 575
DdeI	CTNAG	5 cut(s)	311, 337, 543, 581, 1454
DpnI	GATC	4 cut(s)	174, 893, 1015, 1527
DpnII	GATC	4 cut(s)	172, 891, 1013, 1525
Eam1104I	CTCTTC	3 cut(s)	198, 731, 1053
EarI	CTCTTC	3 cut(s)	198, 731, 1053
Eco130I	CCWWGG	2 cut(s)	685, 895
Eco32I	GATATC	1 cut(s)	27
Eco47I	GGWCC	1 cut(s)	1303
Eco57I	CTGAAG	3 cut(s)	1046, 1415, 1484
Eco88I	CYCGRG	1 cut(s)	1329
Eco91I	GGTNACC	1 cut(s)	251
EcoO65I	GGTNACC	1 cut(s)	251
EcoRI	GAATTC	1 cut(s)	293
EcoRII	CCWGG	1 cut(s)	371
EcoRV	GATATC	1 cut(s)	27
EcoT14I	CCWWGG	2 cut(s)	685, 895
EcoT22I	ATGCAT	1 cut(s)	1300
ErhI	CCWWGG	2 cut(s)	685, 895
FaeI	CATG	6 cut(s)	634, 673, 737, 899, 1298, 1495
FalI	AAGNNNNNCTT	2 cut(s)	489, 521
FatI	CATG	6 cut(s)	630, 669, 733, 895, 1294, 1491
FauNDI	CATATG	1 cut(s)	1389
FbaI	TGATCA	1 cut(s)	172
FblI	GTMKAC	1 cut(s)	1384
Fnu4HI	GCNGC	3 cut(s)	264, 359, 1427
FokI	GGATG	7 cut(s)	90, 147, 191, 350, 388, 436, 1061
Fsp4HI	GCNGC	3 cut(s)	264, 359, 1427
FspBI	CTAG	3 cut(s)	686, 1143, 1265
GlaI	GCGC	1 cut(s)	203
GluI	GCNGC	3 cut(s)	264, 359, 1427
GsuI	CTGGAG	1 cut(s)	182
HapII	CCGG	1 cut(s)	1330
HgaI	GACGC	1 cut(s)	350
HhaI	GCGC	1 cut(s)	204
Hin1I	GRCGYC	1 cut(s)	1121
Hin1II	CATG	6 cut(s)	634, 673, 737, 899, 1298, 1495
Hin6I	GCGC	1 cut(s)	202
HinP1I	GCGC	1 cut(s)	202
HindIII	AAGCTT	1 cut(s)	1347
HinfI	GANTC	5 cut(s)	116, 190, 698, 949, 1063
HpaII	CCGG	1 cut(s)	1330
HphI	GGTGA	4 cut(s)	133, 245, 855, 1451
Hpy166II	GTNNAC	4 cut(s)	1004, 1225, 1342, 1385
Hpy188I	TCNGA	7 cut(s)	115, 340, 584, 1026, 1126, 1410, 1540
Hpy188III	TCNNGA	5 cut(s)	631, 702, 971, 1017, 1433
Hpy8I	GTNNAC	4 cut(s)	1004, 1225, 1342, 1385
HpyAV	CCTTC	5 cut(s)	441, 833, 1127, 1316, 1430
HpyCH4III	ACNGT	3 cut(s)	800, 1195, 1292
HpyCH4IV	ACGT	4 cut(s)	243, 619, 869, 1121
HpyCH4V	TGCA	9 cut(s)	361, 427, 594, 716, 1249, 1298, 1486, 1523, 1532
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1255, 1459, 1529
HpyF3I	CTNAG	5 cut(s)	311, 337, 543, 581, 1454
HpySE526I	ACGT	4 cut(s)	243, 619, 869, 1121
Hsp92I	GRCGYC	1 cut(s)	1121
Hsp92II	CATG	6 cut(s)	634, 673, 737, 899, 1298, 1495
HspAI	GCGC	1 cut(s)	202
Ksp22I	TGATCA	1 cut(s)	172
Kzo9I	GATC	4 cut(s)	172, 891, 1013, 1525
LmnI	GCTCC	4 cut(s)	9, 687, 899, 1331
Lsp1109I	GCAGC	3 cut(s)	275, 345, 1413
LweI	GCATC	8 cut(s)	213, 345, 366, 414, 468, 627, 781, 1409
MaeI	CTAG	3 cut(s)	686, 1143, 1265
MaeII	ACGT	4 cut(s)	243, 619, 869, 1121
MaeIII	GTNAC	3 cut(s)	251, 861, 1312
MalI	GATC	4 cut(s)	174, 893, 1015, 1527
MboI	GATC	4 cut(s)	172, 891, 1013, 1525
MboII	GAAGA	7 cut(s)	185, 289, 509, 646, 676, 718, 1070
MflI	RGATCY	1 cut(s)	1525
MhlI	GDGCHC	3 cut(s)	1182, 1328, 1361
MlyI	GAGTC	1 cut(s)	184
MmeI	TCCRAC	1 cut(s)	852
Mph1103I	ATGCAT	1 cut(s)	1300
MseI	TTAA	8 cut(s)	75, 84, 153, 282, 447, 744, 756, 1208
MslI	CAYNNNNRTG	3 cut(s)	273, 635, 1293
MspA1I	CMGCKG	1 cut(s)	1034
MspCI	CTTAAG	1 cut(s)	446
MspI	CCGG	1 cut(s)	1330
MspR9I	CCNGG	3 cut(s)	373, 1330, 1331
MvaI	CCWGG	1 cut(s)	373
MwoI	GCNNNNNNNGC	3 cut(s)	1255, 1459, 1529
NciI	CCSGG	2 cut(s)	1330, 1331
NcoI	CCATGG	1 cut(s)	895
NdeI	CATATG	1 cut(s)	1389
NdeII	GATC	4 cut(s)	172, 891, 1013, 1525
NlaIII	CATG	6 cut(s)	634, 673, 737, 899, 1298, 1495
NmuCI	GTSAC	2 cut(s)	251, 861
NsiI	ATGCAT	1 cut(s)	1300
NspI	RCATGY	1 cut(s)	1495
NspV	TTCGAA	1 cut(s)	913
PagI	TCATGA	1 cut(s)	630
PciI	ACATGT	1 cut(s)	1491
PfeI	GAWTC	4 cut(s)	116, 698, 949, 1063
PflMI	CCANNNNNTGG	2 cut(s)	739, 977
PkrI	GCNGC	3 cut(s)	265, 360, 1428
PleI	GAGTC	1 cut(s)	184
PpsI	GAGTC	1 cut(s)	184
PscI	ACATGT	1 cut(s)	1491
PsiI	TTATAA	2 cut(s)	777, 987
Psp1406I	AACGTT	1 cut(s)	243
Psp6I	CCWGG	1 cut(s)	371
PspEI	GGTNACC	1 cut(s)	251
PspGI	CCWGG	1 cut(s)	371
PspPI	GGNCC	1 cut(s)	1303
PstI	CTGCAG	1 cut(s)	1488
PstNI	CAGNNNCTG	2 cut(s)	977, 1529
PsuI	RGATCY	1 cut(s)	1525
RsaI	GTAC	2 cut(s)	559, 576
RsaNI	GTAC	2 cut(s)	558, 575
RseI	CAYNNNNRTG	3 cut(s)	273, 635, 1293
SaqAI	TTAA	8 cut(s)	75, 84, 153, 282, 447, 744, 756, 1208
SatI	GCNGC	3 cut(s)	264, 359, 1427
Sau3AI	GATC	4 cut(s)	172, 891, 1013, 1525
Sau96I	GGNCC	1 cut(s)	1303
SchI	GAGTC	1 cut(s)	184
ScrFI	CCNGG	3 cut(s)	373, 1330, 1331
SduI	GDGCHC	3 cut(s)	1182, 1328, 1361
SfaNI	GCATC	8 cut(s)	213, 345, 366, 414, 468, 627, 781, 1409
SfcI	CTRYAG	1 cut(s)	1484
SfuI	TTCGAA	1 cut(s)	913
SinI	GGWCC	1 cut(s)	1303
SmaI	CCCGGG	1 cut(s)	1331
SmiMI	CAYNNNNRTG	3 cut(s)	273, 635, 1293
SmlI	CTYRAG	2 cut(s)	446, 955
SmoI	CTYRAG	2 cut(s)	446, 955
SsiI	CCGC	1 cut(s)	1034
SspMI	CTAG	3 cut(s)	686, 1143, 1265
StyD4I	CCNGG	3 cut(s)	371, 1328, 1329
StyI	CCWWGG	2 cut(s)	685, 895
TaaI	ACNGT	3 cut(s)	800, 1195, 1292
TaiI	ACGT	4 cut(s)	246, 622, 872, 1124
TaqI	TCGA	1 cut(s)	913
TatI	WGTACW	1 cut(s)	574
TfiI	GAWTC	4 cut(s)	116, 698, 949, 1063
Tru1I	TTAA	8 cut(s)	75, 84, 153, 282, 447, 744, 756, 1208
Tru9I	TTAA	8 cut(s)	75, 84, 153, 282, 447, 744, 756, 1208
TscAI	CASTG	3 cut(s)	630, 894, 982
TseFI	GTSAC	2 cut(s)	251, 861
TseI	GCWGC	3 cut(s)	263, 358, 1426
Tsp45I	GTSAC	2 cut(s)	251, 861
TspDTI	ATGAA	6 cut(s)	510, 619, 623, 647, 686, 750
TspGWI	ACGGA	1 cut(s)	96
TspMI	CCCGGG	1 cut(s)	1329
TspRI	CASTG	3 cut(s)	630, 894, 982
Van91I	CCANNNNNTGG	2 cut(s)	739, 977
Vha464I	CTTAAG	1 cut(s)	446
VpaK11BI	GGWCC	1 cut(s)	1303
XapI	RAATTY	5 cut(s)	45, 61, 293, 482, 1211
XceI	RCATGY	1 cut(s)	1495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	232
XmaI	CCCGGG	1 cut(s)	1329
XmaJI	CCTAGG	1 cut(s)	685
XmiI	GTMKAC	1 cut(s)	1384
XspI	CTAG	3 cut(s)	686, 1143, 1265
ZraI	GACGTC	1 cut(s)	1122
Zsp2I	ATGCAT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.