Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0002966

Physical Location & Seq

Genomic Coordinates Forward (+)

5364010 .. 5367809

Gene Structure 3800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1067100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTCTTGGTTCAGGAGCCTCATCCAAGTCTCAGCCACCACCGCCAGATCATCGGCCCGACCCAGAATTTCCGACCCGTTTTCCTACACTCTGCTCTCCCGCTTCAGCTCTGAGCCGGCTCGACCGAGTCCGATCCATGAGACTCCGGCTCCGACTCCGACCCCTCAACCGCCGACCTTTTACTCGGGTCTGGGCCCCACGATGCCCGGCGACAAGCCGAGGGTGGTGGTCCTGGGCTCGGGCTGGGCCGGGTGCCGGCTTATGAAAGGATTGGACACCGAGCAATACGACATCGTCTGCGTGTCGCCGAGGAACCACATGGTGTTCACGCCGCTGCTGGCTTCCACCTGCGTCGGAACTCTGGAGTTCCGGTCCGTAGCCGAGCCCATTGCGAGGATCCAACCCGCTATTTCGAGAGAAACCGGGTCGTATTTCTTCCTCTCCAATTGTATCGGCCTCGATCCTGATAAGCATGTGGTGAAATGCGAGACGGTAACTGATGGGGCTGAACCCTTGAAGCCATGGAAGTTTGAAATTGCGTATGACAAATTGGTAATTGCTTTGGGAGCAATGCCAACCACTTTTGGCATACAAGGTGTACATGAACATGCAATTTTTCTTCGTGAAGTCTCTCATGCCCAGGAAATCCGTAGGAAGCTGCTCCTAAACTTGATGTTGTCGGATGTGCCTGGTGTTTCAGAGGAAGAGAAAAGCAGACTCCTACACTGTGTTGTTGTCGGAGGTGGTCCCACGGGAGTTGAGTTCAGCGGTGAACTTAGTGACTTTATTCAGAGAGATGTTCAGGAACGATATGCTCATGTGAAAAATTATATTCATGTTACCTTAATTGAGGCAAATGAGATATTATCATCATTTGATGATCGGCTGAGGCACTATGCTACGAAACAACTGACGAAGTCAGGAGTTCGTCTTGTCCGTGGGATCGTTAAGGATGTCAAGGATAAGAAAATAATTCTTAATGATGGCACAGAGGTTCCTTATGGTCTTTTGGTATGGTCTACCGGTGTTGGTCCATCACCTTTGGTGAACTCATTGCCGCTTACAAAGTCTCCTGGTGGAAGGATTGGTGTTGACGAGTGGCTGCGTGTTCCTGACGTGCAGGATGTGTATTCAATTGGAGACTGTAGCGGTTTTGTTGAAAGTACCGGAAAACCAACTCTTCCTGCCTTGGCCCAGGTTGCAGAGAGGCAAGGAAAGTATTTGGCCAATTTACTGAACAAAATTGGCAAAGCTGGTGGAGGACGTGCCAACGCCGCAAGAGAGTATAAATACGAGGAACCATTTGTGTACAAGCATTTAGGAAGCATGGCGACTCTGGGGAGATACAAGGCTCTTGTGGACCTCAGACAGAGCAAGGCGGGAAAAGGCGTATCTATGGCTGGGTTCTTCAGTTGGTTTGTTTGGCGCTCGGCATATTTAACCCGAGTCATAAGCTGGAGGAACAGATTCTATGTGGCGATCAATTGGCTTACAACATTTGTGTTTGGGCGCGATATAAGCAGAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003954 GO:0003959 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0005777 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009987 GO:0016020 GO:0016491 GO:0016651 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031304 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0050896 GO:0051716 GO:0055114 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0098573 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

510

Amino Acids

56.37

Weight (kDa)

9.25

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	74 - 405	5e-54	Pyridine nucleotide-disulphide oxidoreductase
NDH2_C	PF22366	439 - 505	5e-15	NDH2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07180 AT2G29990
fragaria_vesca	FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g38840
malus_domestica	MD03G1067100.v1.1 MD05G1323500.v1.1 MD10G1301300.v1.1
prunus_persica	Prupe.4G039000_v2.0.a1 Prupe.4G039000_v2.0.a1 Prupe.6G055600_v2.0.a1
pyrus_communis	pycom03g05350 pycom05g29800 pycom10g25410
rosa_chinensis	RchiOBHm_Chr5g0006761 RchiOBHm_Chr5g0070091
rosa_laevigata	RLG00000031427 RLG00000036113
rosa_multiflora	Rmu_sc0001044.1_g000041 Rmu_sc0002367.1_g000002
rosa_roxburghii	Rroxscaffold_1G00011050 Rroxscaffold_1G00069280
rosa_rugosa	Rorug04G0424200 Rorug04G0424300 Rorug05G0402300
rosa_samantha	Rh5AG052200 Rh5AG458700 Rh5BG051100 Rh5BG477300 Rh5CG059700 Rh5CG501000 Rh5DG489400
rosa_wichuraiana	Rw5G005230 Rw5G042810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	356
Acc36I	ACCTGC	1 cut(s)	356
AccB1I	GGYRCC	1 cut(s)	252
AccI	GTMKAC	1 cut(s)	1019
AccII	CGCG	1 cut(s)	1512
AclWI	GGATC	5 cut(s)	127, 391, 404, 455, 950
AcoI	YGGCCR	1 cut(s)	1224
AcsI	RAATTY	1 cut(s)	66
AcuI	CTGAAG	2 cut(s)	88, 1393
AdeI	CACNNNGTG	1 cut(s)	322
AfaI	GTAC	3 cut(s)	600, 1165, 1310
AfiI	CCNNNNNNNGG	3 cut(s)	238, 255, 393
AgeI	ACCGGT	1 cut(s)	1022
AgsI	TTSAA	4 cut(s)	517, 533, 1134, 1160
AjiI	CACGTC	2 cut(s)	1117, 1265
AjnI	CCWGG	5 cut(s)	231, 639, 688, 1072, 1194
AluBI	AGCT	4 cut(s)	108, 658, 1253, 1455
AluI	AGCT	4 cut(s)	108, 658, 1253, 1455
Alw26I	GTCTC	6 cut(s)	34, 134, 482, 634, 1074, 1134
AlwI	GGATC	5 cut(s)	127, 391, 404, 455, 950
Ama87I	CYCGRG	3 cut(s)	184, 238, 1443
AoxI	GGCC	6 cut(s)	54, 193, 246, 454, 1191, 1224
ApaI	GGGCCC	1 cut(s)	197
ApeKI	GCWGC	3 cut(s)	334, 658, 1102
ApoI	RAATTY	1 cut(s)	66
AsiGI	ACCGGT	1 cut(s)	1022
Asp700I	GAANNNNTTC	1 cut(s)	1466
AspLEI	GCGC	2 cut(s)	1428, 1512
AsuC2I	CCSGG	3 cut(s)	207, 250, 424
AsuHPI	GGTGA	4 cut(s)	490, 782, 1029, 1057
AvaI	CYCGRG	3 cut(s)	184, 238, 1443
AvaII	GGWCC	5 cut(s)	229, 372, 746, 1031, 1360
BaeGI	GKGCMC	1 cut(s)	197
BalI	TGGCCA	1 cut(s)	1226
BamHI	GGATCC	1 cut(s)	396
BanI	GGYRCC	1 cut(s)	252
BanII	GRGCYC	3 cut(s)	197, 239, 387
BbvCI	CCTCAGC	1 cut(s)	887
BbvI	GCAGC	3 cut(s)	321, 645, 1089
BccI	CCATC	3 cut(s)	494, 977, 1042
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	5 cut(s)	233, 641, 690, 1074, 1196
BcnI	CCSGG	3 cut(s)	207, 250, 424
BcoDI	GTCTC	6 cut(s)	34, 134, 482, 634, 1074, 1134
BfaI	CTAG	1 cut(s)	1528
BfmI	CTRYAG	1 cut(s)	1144
BfoI	RGCGCY	1 cut(s)	1429
BfuAI	ACCTGC	1 cut(s)	356
BisI	GCNGC	6 cut(s)	332, 335, 659, 1058, 1103, 1275
BlsI	GCNGC	6 cut(s)	333, 336, 660, 1059, 1104, 1276
Bme1390I	CCNGG	8 cut(s)	207, 233, 250, 424, 641, 690, 1074, 1196
Bme18I	GGWCC	5 cut(s)	229, 372, 746, 1031, 1360
BmeT110I	CYCGRG	3 cut(s)	184, 238, 1443
BmgBI	CACGTC	2 cut(s)	1117, 1265
BmrFI	CCNGG	8 cut(s)	207, 233, 250, 424, 641, 690, 1074, 1196
BmsI	GCATC	1 cut(s)	192
BpmI	CTGGAG	2 cut(s)	383, 1477
Bpu10I	CCTNAGC	1 cut(s)	887
BpuMI	CCSGG	3 cut(s)	207, 250, 424
BsaJI	CCNNGG	9 cut(s)	218, 232, 308, 521, 639, 750, 937, 1188, 1194
BsaWI	WCCGGW	3 cut(s)	369, 1022, 1166
BsaXI	ACNNNNNCTCC	6 cut(s)	133, 163, 356, 386, 1054, 1084
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 255, 393
Bse118I	RCCGGY	3 cut(s)	115, 255, 1022
Bse3DI	GCAATG	3 cut(s)	387, 576, 1052
BseBI	CCWGG	5 cut(s)	233, 641, 690, 1074, 1196
BseDI	CCNNGG	9 cut(s)	218, 232, 308, 521, 639, 750, 937, 1188, 1194
BseGI	GGATG	4 cut(s)	21, 688, 958, 1129
BseLI	CCNNNNNNNGG	3 cut(s)	238, 255, 393
BseMI	GCAATG	3 cut(s)	387, 576, 1052
BseMII	CTCAG	4 cut(s)	45, 102, 878, 1378
BseSI	GKGCMC	1 cut(s)	197
BseXI	GCAGC	3 cut(s)	321, 645, 1089
BseYI	CCCAGC	2 cut(s)	243, 1400
BsgI	GTGCAG	1 cut(s)	1139
Bsh1236I	CGCG	1 cut(s)	1512
Bsh1285I	CGRYCG	1 cut(s)	125
BshFI	GGCC	6 cut(s)	56, 195, 248, 456, 1193, 1226
BshNI	GGYRCC	1 cut(s)	252
BshTI	ACCGGT	1 cut(s)	1022
BsiEI	CGRYCG	1 cut(s)	125
BsiHKCI	CYCGRG	3 cut(s)	184, 238, 1443
BsiSI	CCGG	9 cut(s)	116, 146, 207, 249, 256, 370, 423, 1023, 1167
BslFI	GGGAC	1 cut(s)	732
BslI	CCNNNNNNNGG	3 cut(s)	238, 255, 393
BsmAI	GTCTC	6 cut(s)	34, 134, 482, 634, 1074, 1134
BsmBI	CGTCTC	1 cut(s)	482
BsmFI	GGGAC	1 cut(s)	732
BsnI	GGCC	6 cut(s)	56, 195, 248, 456, 1193, 1226
BsoBI	CYCGRG	3 cut(s)	184, 238, 1443
Bsp120I	GGGCCC	1 cut(s)	193
Bsp1286I	GDGCHC	3 cut(s)	197, 239, 387
Bsp1407I	TGTACA	2 cut(s)	598, 1308
Bsp143I	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
Bsp19I	CCATGG	1 cut(s)	521
BspANI	GGCC	6 cut(s)	56, 195, 248, 456, 1193, 1226
BspCNI	CTCAG	4 cut(s)	44, 103, 879, 1377
BspFNI	CGCG	1 cut(s)	1512
BspMI	ACCTGC	1 cut(s)	356
BspPI	GGATC	5 cut(s)	127, 391, 404, 455, 950
BspT107I	GGYRCC	1 cut(s)	252
BsrDI	GCAATG	3 cut(s)	387, 576, 1052
BsrFI	RCCGGY	3 cut(s)	115, 255, 1022
BsrGI	TGTACA	2 cut(s)	598, 1308
BssAI	RCCGGY	3 cut(s)	115, 255, 1022
BssECI	CCNNGG	9 cut(s)	218, 232, 308, 521, 639, 750, 937, 1188, 1194
BssMI	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
BssT1I	CCWWGG	2 cut(s)	521, 1188
Bst2UI	CCWGG	5 cut(s)	233, 641, 690, 1074, 1196
Bst4CI	ACNGT	3 cut(s)	493, 728, 1145
Bst6I	CTCTTC	2 cut(s)	699, 1185
BstAUI	TGTACA	2 cut(s)	598, 1308
BstC8I	GCNNGC	3 cut(s)	117, 257, 339
BstDEI	CTNAG	5 cut(s)	31, 111, 776, 887, 1364
BstDSI	CCRYGG	3 cut(s)	521, 750, 937
BstF5I	GGATG	4 cut(s)	21, 688, 958, 1129
BstFNI	CGCG	1 cut(s)	1512
BstH2I	RGCGCY	1 cut(s)	1429
BstHHI	GCGC	2 cut(s)	1428, 1512
BstKTI	GATC	7 cut(s)	50, 135, 399, 463, 883, 945, 1482
BstMAI	GTCTC	6 cut(s)	34, 134, 482, 634, 1074, 1134
BstMBI	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
BstMCI	CGRYCG	1 cut(s)	125
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 566, 1199, 1274, 1518
BstNI	CCWGG	5 cut(s)	233, 641, 690, 1074, 1196
BstNSI	RCATGY	2 cut(s)	476, 611
BstSCI	CCNGG	8 cut(s)	205, 231, 248, 422, 639, 688, 1072, 1194
BstSFI	CTRYAG	1 cut(s)	1144
BstSLI	GKGCMC	1 cut(s)	197
BstUI	CGCG	1 cut(s)	1512
BstV1I	GCAGC	3 cut(s)	321, 645, 1089
BstX2I	RGATCY	1 cut(s)	396
BstYI	RGATCY	1 cut(s)	396
BsuRI	GGCC	6 cut(s)	56, 195, 248, 456, 1193, 1226
BtgI	CCRYGG	3 cut(s)	521, 750, 937
BtrI	CACGTC	2 cut(s)	1117, 1265
BtsCI	GGATG	4 cut(s)	21, 688, 958, 1129
BtsIMutI	CAGTG	1 cut(s)	724
BveI	ACCTGC	1 cut(s)	356
Cac8I	GCNNGC	3 cut(s)	117, 257, 339
CfoI	GCGC	2 cut(s)	1428, 1512
Cfr10I	RCCGGY	3 cut(s)	115, 255, 1022
CpoI	CGGWCCG	1 cut(s)	372
CseI	GACGC	1 cut(s)	340
Csp6I	GTAC	3 cut(s)	599, 1164, 1309
CspAI	ACCGGT	1 cut(s)	1022
CspCI	CAANNNNNGTGG	4 cut(s)	739, 774, 1237, 1272
CspI	CGGWCCG	1 cut(s)	372
CviQI	GTAC	3 cut(s)	599, 1164, 1309
DdeI	CTNAG	5 cut(s)	31, 111, 776, 887, 1364
DpnI	GATC	7 cut(s)	49, 134, 398, 462, 882, 944, 1481
DpnII	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
DraIII	CACNNNGTG	1 cut(s)	322
EaeI	YGGCCR	1 cut(s)	1224
Eam1104I	CTCTTC	2 cut(s)	699, 1185
EarI	CTCTTC	2 cut(s)	699, 1185
Eco130I	CCWWGG	2 cut(s)	521, 1188
Eco24I	GRGCYC	3 cut(s)	197, 239, 387
Eco47I	GGWCC	5 cut(s)	229, 372, 746, 1031, 1360
Eco57I	CTGAAG	2 cut(s)	88, 1393
Eco88I	CYCGRG	3 cut(s)	184, 238, 1443
EcoO109I	RGGNCCY	1 cut(s)	194
EcoRII	CCWGG	5 cut(s)	231, 639, 688, 1072, 1194
EcoT14I	CCWWGG	2 cut(s)	521, 1188
EcoT38I	GRGCYC	3 cut(s)	197, 239, 387
ErhI	CCWWGG	2 cut(s)	521, 1188
Esp3I	CGTCTC	1 cut(s)	482
FaqI	GGGAC	1 cut(s)	732
FauI	CCCGC	3 cut(s)	107, 412, 1372
FblI	GTMKAC	1 cut(s)	1019
Fnu4HI	GCNGC	6 cut(s)	332, 335, 659, 1058, 1103, 1275
FokI	GGATG	4 cut(s)	8, 695, 965, 1136
FriOI	GRGCYC	3 cut(s)	197, 239, 387
Fsp4HI	GCNGC	6 cut(s)	332, 335, 659, 1058, 1103, 1275
FspBI	CTAG	1 cut(s)	1528
GlaI	GCGC	2 cut(s)	1427, 1511
GluI	GCNGC	6 cut(s)	332, 335, 659, 1058, 1103, 1275
GsaI	CCCAGC	2 cut(s)	247, 1404
GsuI	CTGGAG	2 cut(s)	383, 1477
HaeII	RGCGCY	1 cut(s)	1429
HaeIII	GGCC	6 cut(s)	56, 195, 248, 456, 1193, 1226
HapII	CCGG	9 cut(s)	116, 146, 207, 249, 256, 370, 423, 1023, 1167
HgaI	GACGC	1 cut(s)	340
HhaI	GCGC	2 cut(s)	1428, 1512
Hin6I	GCGC	2 cut(s)	1426, 1510
HinP1I	GCGC	2 cut(s)	1426, 1510
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HinfI	GANTC	8 cut(s)	127, 142, 154, 717, 1333, 1446, 1467, 1524
HpaII	CCGG	9 cut(s)	116, 146, 207, 249, 256, 370, 423, 1023, 1167
HphI	GGTGA	4 cut(s)	490, 782, 1029, 1057
Hpy166II	GTNNAC	8 cut(s)	327, 599, 773, 1020, 1048, 1093, 1309, 1360
Hpy188III	TCNNGA	8 cut(s)	13, 362, 414, 464, 623, 803, 921, 1112
Hpy8I	GTNNAC	8 cut(s)	327, 599, 773, 1020, 1048, 1093, 1309, 1360
Hpy99I	CGWCG	1 cut(s)	356
HpyAV	CCTTC	1 cut(s)	1074
HpyCH4III	ACNGT	3 cut(s)	493, 728, 1145
HpyCH4IV	ACGT	2 cut(s)	1116, 1264
HpyCH4V	TGCA	3 cut(s)	611, 1120, 1202
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 566, 1199, 1274, 1518
HpyF3I	CTNAG	5 cut(s)	31, 111, 776, 887, 1364
HpySE526I	ACGT	2 cut(s)	1116, 1264
HspAI	GCGC	2 cut(s)	1426, 1510
KroI	GCCGGC	2 cut(s)	115, 255
KroNI	GCCGGC	2 cut(s)	117, 257
Kzo9I	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
LmnI	GCTCC	4 cut(s)	15, 154, 566, 666
Lsp1109I	GCAGC	3 cut(s)	321, 645, 1089
LweI	GCATC	1 cut(s)	192
MaeI	CTAG	1 cut(s)	1528
MaeII	ACGT	2 cut(s)	1116, 1264
MaeIII	GTNAC	3 cut(s)	493, 779, 838
MalI	GATC	7 cut(s)	49, 134, 398, 462, 882, 944, 1481
MboI	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
MboII	GAAGA	5 cut(s)	427, 611, 716, 1172, 1399
MfeI	CAATTG	3 cut(s)	445, 1134, 1483
MflI	RGATCY	1 cut(s)	396
MhlI	GDGCHC	3 cut(s)	197, 239, 387
MlsI	TGGCCA	1 cut(s)	1226
MluNI	TGGCCA	1 cut(s)	1226
MlyI	GAGTC	6 cut(s)	136, 136, 148, 711, 1327, 1455
MmeI	TCCRAC	7 cut(s)	96, 176, 182, 334, 424, 660, 718
Mox20I	TGGCCA	1 cut(s)	1226
MroNI	GCCGGC	2 cut(s)	115, 255
MroXI	GAANNNNTTC	1 cut(s)	1466
MscI	TGGCCA	1 cut(s)	1226
MseI	TTAA	4 cut(s)	845, 948, 978, 1439
MslI	CAYNNNNRTG	1 cut(s)	606
Msp20I	TGGCCA	1 cut(s)	1226
MspA1I	CMGCKG	2 cut(s)	334, 768
MspI	CCGG	9 cut(s)	116, 146, 207, 249, 256, 370, 423, 1023, 1167
MspR9I	CCNGG	8 cut(s)	207, 233, 250, 424, 641, 690, 1074, 1196
MunI	CAATTG	3 cut(s)	445, 1134, 1483
MvaI	CCWGG	5 cut(s)	233, 641, 690, 1074, 1196
MvnI	CGCG	1 cut(s)	1512
MwoI	GCNNNNNNNGC	5 cut(s)	41, 566, 1199, 1274, 1518
NaeI	GCCGGC	2 cut(s)	117, 257
NciI	CCSGG	3 cut(s)	207, 250, 424
NcoI	CCATGG	1 cut(s)	521
NdeII	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
NgoMIV	GCCGGC	2 cut(s)	115, 255
NmeAIII	GCCGAG	4 cut(s)	243, 333, 406, 1409
NmuCI	GTSAC	1 cut(s)	779
NspI	RCATGY	2 cut(s)	476, 611
PaqCI	CACCTGC	1 cut(s)	356
PcsI	WCGNNNNNNNCGW	1 cut(s)	934
PdiI	GCCGGC	2 cut(s)	117, 257
PdmI	GAANNNNTTC	1 cut(s)	1466
PfeI	GAWTC	2 cut(s)	1467, 1524
PflFI	GACNNNGTC	3 cut(s)	126, 293, 916
PinAI	ACCGGT	1 cut(s)	1022
PkrI	GCNGC	6 cut(s)	333, 336, 660, 1059, 1104, 1276
PleI	GAGTC	6 cut(s)	135, 136, 148, 711, 1327, 1454
PpsI	GAGTC	6 cut(s)	135, 136, 148, 711, 1327, 1454
Psp6I	CCWGG	5 cut(s)	231, 639, 688, 1072, 1194
PspFI	CCCAGC	2 cut(s)	243, 1400
PspGI	CCWGG	5 cut(s)	231, 639, 688, 1072, 1194
PspOMI	GGGCCC	1 cut(s)	193
PsuI	RGATCY	1 cut(s)	396
PsyI	GACNNNGTC	3 cut(s)	126, 293, 916
RsaI	GTAC	3 cut(s)	600, 1165, 1310
RsaNI	GTAC	3 cut(s)	599, 1164, 1309
RseI	CAYNNNNRTG	1 cut(s)	606
Rsr2I	CGGWCCG	1 cut(s)	372
RsrII	CGGWCCG	1 cut(s)	372
SaqAI	TTAA	4 cut(s)	845, 948, 978, 1439
SatI	GCNGC	6 cut(s)	332, 335, 659, 1058, 1103, 1275
Sau3AI	GATC	7 cut(s)	47, 132, 396, 460, 880, 942, 1479
SchI	GAGTC	6 cut(s)	136, 136, 148, 711, 1327, 1455
ScrFI	CCNGG	8 cut(s)	207, 233, 250, 424, 641, 690, 1074, 1196
SduI	GDGCHC	3 cut(s)	197, 239, 387
SfaNI	GCATC	1 cut(s)	192
SfcI	CTRYAG	1 cut(s)	1144
SinI	GGWCC	5 cut(s)	229, 372, 746, 1031, 1360
SmiMI	CAYNNNNRTG	1 cut(s)	606
SspMI	CTAG	1 cut(s)	1528
StyD4I	CCNGG	8 cut(s)	205, 231, 248, 422, 639, 688, 1072, 1194
StyI	CCWWGG	2 cut(s)	521, 1188
TaaI	ACNGT	3 cut(s)	493, 728, 1145
TaiI	ACGT	2 cut(s)	1119, 1267
TaqI	TCGA	3 cut(s)	121, 413, 459
TaqII	GACCGA	1 cut(s)	139
TatI	WGTACW	2 cut(s)	598, 1308
TauI	GCSGC	3 cut(s)	334, 1060, 1277
TfiI	GAWTC	2 cut(s)	1467, 1524
Tru1I	TTAA	4 cut(s)	845, 948, 978, 1439
Tru9I	TTAA	4 cut(s)	845, 948, 978, 1439
TscAI	CASTG	1 cut(s)	731
TseFI	GTSAC	1 cut(s)	779
TseI	GCWGC	3 cut(s)	334, 658, 1102
Tsp45I	GTSAC	1 cut(s)	779
TspDTI	ATGAA	3 cut(s)	278, 618, 824
TspGWI	ACGGA	3 cut(s)	364, 638, 926
TspRI	CASTG	1 cut(s)	731
Tth111I	GACNNNGTC	3 cut(s)	126, 293, 916
VpaK11BI	GGWCC	5 cut(s)	229, 372, 746, 1031, 1360
XapI	RAATTY	1 cut(s)	66
XceI	RCATGY	2 cut(s)	476, 611
XmiI	GTMKAC	1 cut(s)	1019
XmnI	GAANNNNTTC	1 cut(s)	1466
XspI	CTAG	1 cut(s)	1528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.