Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002966

Physical Location & Seq

Genomic Coordinates Reverse (-)

75882187 .. 75887336

Gene Structure 5150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036113

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGTCTTGGTTCAGAAGCCTCATCCAAGTCTCGGCCAGAGCCTCATCATCGTCGTCGTCGTCGTCGTCGTCGTCTTCAGCCAAATCCAGAATCACTGACCCTTTCTCTTACTCTCTCATCTCATGCTTCACCACCGAGGCCCGACCGCCGGCGTTGTACTCCGGCTTGGGGGCGACGAAGCCCGGCGAGAAGCCGAGGGTGGTGGTGCTGGGGACGGGGTGGGCCGGGTGTCGGCTCATGAAGGGGTTGGACACGAAGCTCTACGACGTCGTTTGCGTCTCGCCGAGGAATCACATGGTGTTCACGCCGCTGCTGGCGTCCACGTGTGTTGGGACTCTGGAGTTTAGGTCGGTGGCGGAGCCAGTCGGGAGGATCCAACCCGCCATTTCGAGGGAGCCAGGGTCGTATTTCTTTCTCTCCAATTGTATTGGGCTTGATACGGATAAGCATTTGGTGCAATGTGAGACTGTAACTGATGGAGCTGATAACTTGGAGCCATGGAAATTTGAAATTGCCTACGACAAGCTGGTAATTGCATTGGGTGCACAGCCCACGACTTTCGGAATACGTGGTGTAGAAGAACATGCCATTTTTCTTCGTGAAGTCTACCATGCCCAGGAAATCCGTAGGAAGCTGCTCCTAAACTTGATGCTGTCGGATGTTCCCGGTGTTTCAGAGGAAGAGAAAAGCAGACTCCTACATTGTGTTGTTGTAGGGGGTGGTCCCACCGGAGTCGAGTTCAGTGGTGAACTAAGTGACTTTATTCAGAAAGATGTTCATCAGAGATATGCCCATGTGAAAGATTACATTCATGTTACCTTGATTGAGGCTAGCGAGATATTGTCTTCATTTGATGATCGCCTGCGGCACTACGCTACAAAACAGTTGACAAAGTCAGGAGTCCGTCTTGTCCGTGGAATTGTGAAGGATGTCAAAGATAAGACAATAGTTCTCAATGATGGCACAGAGGTCCCTTATGGGCTATTGGTGTGGTCTACTGGTGTTGGTCCATCATCTTTTGTAAACTCTGTGCAACTTCCAAAAGCTCCTGGTGGAAGGATTGGTGTTGATGAGTGGCTACGTGTTCCGTCCGTGCAGGATGTGTTTTCAATTGGTGATTGCAGTGGTTTTCTTGAAAGTACTGGAAAACCAGTCCTTCCGGCTTTGGCCCAGGTTGCAGAGAGAGAAGGAAAATATCTAGCAAATTTACTGAACAAAATTGGTGAAGCTGGTGGAGGGCATGCCAACAGTGCAAAAGAATATGCATACAAGGAACCTTTTGTTTACAAGCATTTAGGTAGCATGGCAACTGTTGGGAGATACAAAGCTCTTGTGGATCTGAGACAAAGCAAGGAAGCAAAAGGTTTATCTTTGGCTGGGTTTGTTAGTTGGTTTATTTGGCGCTCAGCATATTTAACAAGAGTTATAAGCTGGAGGAACAGATTTTATGTGGCGATTAACTGGCTTACGACTTTGGTGTTTGGACGTGATATAAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003954 GO:0003959 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0005777 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009987 GO:0016020 GO:0016491 GO:0016651 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031304 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0050896 GO:0051716 GO:0055114 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0098573 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

502

Amino Acids

55.11

Weight (kDa)

8.92

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	66 - 397	7.6e-52	Pyridine nucleotide-disulphide oxidoreductase
NDH2_C	PF22366	431 - 497	6.2e-15	NDH2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07180 AT2G29990
fragaria_vesca	FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g38840
malus_domestica	MD03G1067100.v1.1 MD05G1323500.v1.1 MD10G1301300.v1.1
prunus_persica	Prupe.4G039000_v2.0.a1 Prupe.4G039000_v2.0.a1 Prupe.6G055600_v2.0.a1
pyrus_communis	pycom03g05350 pycom05g29800 pycom10g25410
rosa_chinensis	RchiOBHm_Chr5g0006761 RchiOBHm_Chr5g0070091
rosa_laevigata	RLG00000031427 RLG00000036113
rosa_multiflora	Rmu_sc0001044.1_g000041 Rmu_sc0002367.1_g000002
rosa_roxburghii	Rroxscaffold_1G00011050 Rroxscaffold_1G00069280
rosa_rugosa	Rorug04G0424200 Rorug04G0424300 Rorug05G0402300
rosa_samantha	Rh5AG052200 Rh5AG458700 Rh5BG051100 Rh5BG477300 Rh5CG059700 Rh5CG501000 Rh5DG489400
rosa_wichuraiana	Rw5G005230 Rw5G042810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1427
AatII	GACGTC	1 cut(s)	270
AccI	GTMKAC	2 cut(s)	606, 995
AciI	CCGC	5 cut(s)	146, 308, 356, 381, 865
AclWI	GGATC	3 cut(s)	367, 380, 1344
AcoI	YGGCCR	1 cut(s)	33
AcsI	RAATTY	3 cut(s)	503, 1204, 1500
AcuI	CTGAAG	1 cut(s)	60
AcvI	CACGTG	1 cut(s)	324
AcyI	GRCGYC	2 cut(s)	267, 317
AdeI	CACNNNGTG	1 cut(s)	298
AfaI	GTAC	2 cut(s)	158, 1141
AfiI	CCNNNNNNNGG	6 cut(s)	31, 148, 168, 231, 390, 616
AflIII	ACRYGT	2 cut(s)	323, 1081
AgsI	TTSAA	3 cut(s)	509, 1110, 1136
AjiI	CACGTC	1 cut(s)	1487
AjnI	CCWGG	4 cut(s)	397, 615, 1048, 1170
AluBI	AGCT	8 cut(s)	259, 482, 526, 634, 1046, 1229, 1328, 1431
AluI	AGCT	8 cut(s)	259, 482, 526, 634, 1046, 1229, 1328, 1431
Alw21I	GWGCWC	1 cut(s)	547
Alw26I	GTCTC	4 cut(s)	34, 283, 458, 1336
Alw44I	GTGCAC	1 cut(s)	543
AlwI	GGATC	3 cut(s)	367, 380, 1344
AoxI	GGCC	4 cut(s)	33, 138, 222, 1167
ApaLI	GTGCAC	1 cut(s)	543
ApeKI	GCWGC	2 cut(s)	310, 634
ApoI	RAATTY	3 cut(s)	503, 1204, 1500
AspLEI	GCGC	1 cut(s)	1404
AspS9I	GGNCC	6 cut(s)	139, 222, 722, 970, 1007, 1168
AsuC2I	CCSGG	3 cut(s)	183, 226, 666
AsuHPI	GGTGA	4 cut(s)	121, 758, 1127, 1235
AsuNHI	GCTAGC	1 cut(s)	830
AvaII	GGWCC	3 cut(s)	722, 970, 1007
BaeGI	GKGCMC	1 cut(s)	547
BamHI	GGATCC	1 cut(s)	372
BbrPI	CACGTG	1 cut(s)	324
BbsI	GAAGAC	2 cut(s)	66, 837
Bbv12I	GWGCWC	1 cut(s)	547
BbvI	GCAGC	2 cut(s)	297, 621
BccI	CCATC	3 cut(s)	470, 953, 1018
BciT130I	CCWGG	4 cut(s)	399, 617, 1050, 1172
BcnI	CCSGG	3 cut(s)	183, 226, 666
BcoDI	GTCTC	4 cut(s)	34, 283, 458, 1336
BfaI	CTAG	2 cut(s)	831, 1199
BfoI	RGCGCY	1 cut(s)	1405
BisI	GCNGC	4 cut(s)	308, 311, 635, 866
BlpI	GCTNAGC	1 cut(s)	1405
BlsI	GCNGC	4 cut(s)	309, 312, 636, 867
BmcAI	AGTACT	1 cut(s)	1141
Bme1390I	CCNGG	7 cut(s)	183, 226, 399, 617, 666, 1050, 1172
Bme18I	GGWCC	3 cut(s)	722, 970, 1007
BmgBI	CACGTC	1 cut(s)	1487
BmgT120I	GGNCC	6 cut(s)	139, 222, 722, 970, 1007, 1168
BmiI	GGNNCC	7 cut(s)	360, 374, 396, 495, 724, 972, 1275
BmrFI	CCNGG	7 cut(s)	183, 226, 399, 617, 666, 1050, 1172
BmsI	GCATC	1 cut(s)	639
BmtI	GCTAGC	1 cut(s)	834
BpiI	GAAGAC	2 cut(s)	66, 837
BpmI	CTGGAG	2 cut(s)	359, 1453
Bpu1102I	GCTNAGC	1 cut(s)	1405
BpuMI	CCSGG	3 cut(s)	183, 226, 666
BsaAI	YACGTR	3 cut(s)	324, 569, 1082
BsaBI	GATNNNNATC	1 cut(s)	777
BsaHI	GRCGYC	2 cut(s)	267, 317
BsaJI	CCNNGG	8 cut(s)	135, 194, 284, 398, 497, 615, 913, 1170
BsaWI	WCCGGW	1 cut(s)	728
BsaXI	ACNNNNNCTCC	4 cut(s)	332, 362, 386, 416
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 148, 168, 231, 390, 616
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	5 cut(s)	362, 1003, 1147, 1151, 1466
Bse3DI	GCAATG	1 cut(s)	464
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	4 cut(s)	399, 617, 1050, 1172
BseDI	CCNNGG	8 cut(s)	135, 194, 284, 398, 497, 615, 913, 1170
BseGI	GGATG	4 cut(s)	21, 664, 934, 1105
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	6 cut(s)	31, 148, 168, 231, 390, 616
BseMI	GCAATG	1 cut(s)	464
BseMII	CTCAG	2 cut(s)	1331, 1419
BseNI	ACTGG	5 cut(s)	362, 1003, 1147, 1151, 1466
BseSI	GKGCMC	1 cut(s)	547
BseXI	GCAGC	2 cut(s)	297, 621
BseYI	CCCAGC	2 cut(s)	208, 1376
BsgI	GTGCAG	1 cut(s)	1115
Bsh1285I	CGRYCG	1 cut(s)	146
BshFI	GGCC	4 cut(s)	35, 140, 224, 1169
BsiEI	CGRYCG	1 cut(s)	146
BsiHKAI	GWGCWC	1 cut(s)	547
BsiSI	CCGG	7 cut(s)	149, 162, 183, 225, 666, 729, 1160
BslFI	GGGAC	4 cut(s)	226, 346, 708, 956
BslI	CCNNNNNNNGG	6 cut(s)	31, 148, 168, 231, 390, 616
BsmAI	GTCTC	4 cut(s)	34, 283, 458, 1336
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	4 cut(s)	226, 346, 708, 956
BsnI	GGCC	4 cut(s)	35, 140, 224, 1169
Bsp1286I	GDGCHC	1 cut(s)	547
Bsp143I	GATC	3 cut(s)	372, 856, 1336
Bsp1720I	GCTNAGC	1 cut(s)	1405
Bsp19I	CCATGG	1 cut(s)	497
BspACI	CCGC	5 cut(s)	146, 308, 356, 381, 865
BspANI	GGCC	4 cut(s)	35, 140, 224, 1169
BspCNI	CTCAG	2 cut(s)	1332, 1418
BspHI	TCATGA	1 cut(s)	237
BspLI	GGNNCC	7 cut(s)	360, 374, 396, 495, 724, 972, 1275
BspOI	GCTAGC	1 cut(s)	834
BspPI	GGATC	3 cut(s)	367, 380, 1344
BsrDI	GCAATG	1 cut(s)	464
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	5 cut(s)	362, 1003, 1147, 1151, 1466
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	8 cut(s)	135, 194, 284, 398, 497, 615, 913, 1170
BssMI	GATC	3 cut(s)	372, 856, 1336
BssNI	GRCGYC	2 cut(s)	267, 317
BssT1I	CCWWGG	1 cut(s)	497
Bst2UI	CCWGG	4 cut(s)	399, 617, 1050, 1172
Bst4CI	ACNGT	4 cut(s)	469, 885, 1250, 1312
Bst6I	CTCTTC	1 cut(s)	675
BstACI	GRCGYC	2 cut(s)	267, 317
BstAPI	GCANNNNNTGC	2 cut(s)	454, 542
BstBAI	YACGTR	3 cut(s)	324, 569, 1082
BstC8I	GCNNGC	5 cut(s)	150, 315, 832, 863, 1242
BstDEI	CTNAG	3 cut(s)	752, 1340, 1405
BstDSI	CCRYGG	2 cut(s)	497, 913
BstF5I	GGATG	4 cut(s)	21, 664, 934, 1105
BstH2I	RGCGCY	1 cut(s)	1405
BstHHI	GCGC	1 cut(s)	1404
BstKTI	GATC	3 cut(s)	375, 859, 1339
BstMAI	GTCTC	4 cut(s)	34, 283, 458, 1336
BstMBI	GATC	3 cut(s)	372, 856, 1336
BstMCI	CGRYCG	1 cut(s)	146
BstMWI	GCNNNNNNNGC	4 cut(s)	454, 542, 1175, 1250
BstNI	CCWGG	4 cut(s)	399, 617, 1050, 1172
BstNSI	RCATGY	2 cut(s)	587, 1244
BstSCI	CCNGG	7 cut(s)	181, 224, 397, 615, 664, 1048, 1170
BstSLI	GKGCMC	1 cut(s)	547
BstV1I	GCAGC	2 cut(s)	297, 621
BstV2I	GAAGAC	2 cut(s)	66, 837
BstX2I	RGATCY	2 cut(s)	372, 1336
BstYI	RGATCY	2 cut(s)	372, 1336
BsuRI	GGCC	4 cut(s)	35, 140, 224, 1169
BtgI	CCRYGG	2 cut(s)	497, 913
BtrI	CACGTC	1 cut(s)	1487
BtsCI	GGATG	4 cut(s)	21, 664, 934, 1105
BtsI	GCAGTG	1 cut(s)	1129
BtsIMutI	CAGTG	4 cut(s)	93, 748, 1129, 1255
Cac8I	GCNNGC	5 cut(s)	150, 315, 832, 863, 1242
CciI	TCATGA	1 cut(s)	237
CfoI	GCGC	1 cut(s)	1404
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	6 cut(s)	139, 222, 722, 970, 1007, 1168
CseI	GACGC	2 cut(s)	265, 306
Csp6I	GTAC	2 cut(s)	157, 1140
CspCI	CAANNNNNGTGG	2 cut(s)	310, 345
CviQI	GTAC	2 cut(s)	157, 1140
DdeI	CTNAG	3 cut(s)	752, 1340, 1405
DpnI	GATC	3 cut(s)	374, 858, 1338
DpnII	GATC	3 cut(s)	372, 856, 1336
DraIII	CACNNNGTG	1 cut(s)	298
EaeI	YGGCCR	1 cut(s)	33
Eam1104I	CTCTTC	1 cut(s)	675
EarI	CTCTTC	1 cut(s)	675
EciI	GGCGGA	1 cut(s)	371
Eco130I	CCWWGG	1 cut(s)	497
Eco47I	GGWCC	3 cut(s)	722, 970, 1007
Eco57I	CTGAAG	1 cut(s)	60
Eco72I	CACGTG	1 cut(s)	324
EcoO109I	RGGNCCY	1 cut(s)	970
EcoRII	CCWGG	4 cut(s)	397, 615, 1048, 1170
EcoT14I	CCWWGG	1 cut(s)	497
EcoT22I	ATGCAT	1 cut(s)	1267
ErhI	CCWWGG	1 cut(s)	497
Esp3I	CGTCTC	1 cut(s)	283
FaqI	GGGAC	4 cut(s)	226, 346, 708, 956
FauI	CCCGC	1 cut(s)	388
FblI	GTMKAC	2 cut(s)	606, 995
Fnu4HI	GCNGC	4 cut(s)	308, 311, 635, 866
FokI	GGATG	4 cut(s)	8, 671, 941, 1112
Fsp4HI	GCNGC	4 cut(s)	308, 311, 635, 866
FspBI	CTAG	2 cut(s)	831, 1199
GlaI	GCGC	1 cut(s)	1403
GluI	GCNGC	4 cut(s)	308, 311, 635, 866
GsaI	CCCAGC	2 cut(s)	212, 1380
GsuI	CTGGAG	2 cut(s)	359, 1453
HaeII	RGCGCY	1 cut(s)	1405
HaeIII	GGCC	4 cut(s)	35, 140, 224, 1169
HapII	CCGG	7 cut(s)	149, 162, 183, 225, 666, 729, 1160
HgaI	GACGC	2 cut(s)	265, 306
HhaI	GCGC	1 cut(s)	1404
Hin1I	GRCGYC	2 cut(s)	267, 317
Hin6I	GCGC	1 cut(s)	1402
HinP1I	GCGC	1 cut(s)	1402
HincII	GTYRAC	1 cut(s)	888
HindII	GTYRAC	1 cut(s)	888
HinfI	GANTC	6 cut(s)	90, 289, 334, 693, 732, 900
HpaII	CCGG	7 cut(s)	149, 162, 183, 225, 666, 729, 1160
HphI	GGTGA	4 cut(s)	121, 758, 1127, 1235
Hpy166II	GTNNAC	9 cut(s)	303, 321, 545, 607, 749, 888, 996, 1024, 1285
Hpy188I	TCNGA	7 cut(s)	14, 563, 658, 676, 768, 783, 1341
Hpy188III	TCNNGA	7 cut(s)	87, 238, 338, 367, 599, 897, 1133
Hpy8I	GTNNAC	9 cut(s)	303, 321, 545, 607, 749, 888, 996, 1024, 1285
HpyAV	CCTTC	5 cut(s)	235, 919, 1050, 1166, 1181
HpyCH4III	ACNGT	4 cut(s)	469, 885, 1250, 1312
HpyCH4IV	ACGT	5 cut(s)	267, 323, 568, 1081, 1486
HpyCH4V	TGCA	9 cut(s)	457, 536, 545, 1033, 1096, 1122, 1178, 1253, 1265
HpyF10VI	GCNNNNNNNGC	4 cut(s)	454, 542, 1175, 1250
HpyF3I	CTNAG	3 cut(s)	752, 1340, 1405
HpySE526I	ACGT	5 cut(s)	267, 323, 568, 1081, 1486
Hsp92I	GRCGYC	2 cut(s)	267, 317
HspAI	GCGC	1 cut(s)	1402
KroI	GCCGGC	1 cut(s)	148
KroNI	GCCGGC	1 cut(s)	150
Kzo9I	GATC	3 cut(s)	372, 856, 1336
LmnI	GCTCC	6 cut(s)	358, 394, 479, 493, 642, 1051
Lsp1109I	GCAGC	2 cut(s)	297, 621
LweI	GCATC	1 cut(s)	639
MaeI	CTAG	2 cut(s)	831, 1199
MaeII	ACGT	5 cut(s)	267, 323, 568, 1081, 1486
MaeIII	GTNAC	3 cut(s)	469, 755, 814
MalI	GATC	3 cut(s)	374, 858, 1338
MboI	GATC	3 cut(s)	372, 856, 1336
MboII	GAAGA	5 cut(s)	66, 587, 590, 692, 837
MfeI	CAATTG	2 cut(s)	421, 1110
MflI	RGATCY	2 cut(s)	372, 1336
MhlI	GDGCHC	1 cut(s)	547
MluCI	AATT	9 cut(s)	421, 503, 510, 531, 918, 1110, 1204, 1218, 1500
MlyI	GAGTC	4 cut(s)	328, 687, 741, 909
MmeI	TCCRAC	3 cut(s)	228, 400, 636
Mph1103I	ATGCAT	1 cut(s)	1267
MreI	CGCCGGCG	1 cut(s)	148
MroNI	GCCGGC	1 cut(s)	148
MseI	TTAA	2 cut(s)	1415, 1458
MspA1I	CMGCKG	1 cut(s)	310
MspI	CCGG	7 cut(s)	149, 162, 183, 225, 666, 729, 1160
MspR9I	CCNGG	7 cut(s)	183, 226, 399, 617, 666, 1050, 1172
MunI	CAATTG	2 cut(s)	421, 1110
MvaI	CCWGG	4 cut(s)	399, 617, 1050, 1172
MwoI	GCNNNNNNNGC	4 cut(s)	454, 542, 1175, 1250
NaeI	GCCGGC	1 cut(s)	150
NciI	CCSGG	3 cut(s)	183, 226, 666
NcoI	CCATGG	1 cut(s)	497
NdeII	GATC	3 cut(s)	372, 856, 1336
NgoMIV	GCCGGC	1 cut(s)	148
NheI	GCTAGC	1 cut(s)	830
NlaIV	GGNNCC	7 cut(s)	360, 374, 396, 495, 724, 972, 1275
NmeAIII	GCCGAG	3 cut(s)	11, 219, 309
NmuCI	GTSAC	1 cut(s)	755
NsiI	ATGCAT	1 cut(s)	1267
NspI	RCATGY	2 cut(s)	587, 1244
PaeI	GCATGC	1 cut(s)	1244
PagI	TCATGA	1 cut(s)	237
PcsI	WCGNNNNNNNCGW	6 cut(s)	56, 59, 62, 65, 68, 273
PdiI	GCCGGC	1 cut(s)	150
PfeI	GAWTC	2 cut(s)	90, 289
PflFI	GACNNNGTC	1 cut(s)	892
PkrI	GCNGC	4 cut(s)	309, 312, 636, 867
PleI	GAGTC	4 cut(s)	328, 687, 740, 908
PmaCI	CACGTG	1 cut(s)	324
PmlI	CACGTG	1 cut(s)	324
PpsI	GAGTC	4 cut(s)	328, 687, 740, 908
Ppu21I	YACGTR	3 cut(s)	324, 569, 1082
PpuMI	RGGWCCY	1 cut(s)	970
PsiI	TTATAA	1 cut(s)	1427
Psp5II	RGGWCCY	1 cut(s)	970
Psp6I	CCWGG	4 cut(s)	397, 615, 1048, 1170
PspCI	CACGTG	1 cut(s)	324
PspFI	CCCAGC	2 cut(s)	208, 1376
PspGI	CCWGG	4 cut(s)	397, 615, 1048, 1170
PspN4I	GGNNCC	7 cut(s)	360, 374, 396, 495, 724, 972, 1275
PspPI	GGNCC	6 cut(s)	139, 222, 722, 970, 1007, 1168
PspPPI	RGGWCCY	1 cut(s)	970
PsuI	RGATCY	2 cut(s)	372, 1336
PsyI	GACNNNGTC	1 cut(s)	892
RsaI	GTAC	2 cut(s)	158, 1141
RsaNI	GTAC	2 cut(s)	157, 1140
SaqAI	TTAA	2 cut(s)	1415, 1458
SatI	GCNGC	4 cut(s)	308, 311, 635, 866
Sau3AI	GATC	3 cut(s)	372, 856, 1336
Sau96I	GGNCC	6 cut(s)	139, 222, 722, 970, 1007, 1168
ScaI	AGTACT	1 cut(s)	1141
SchI	GAGTC	4 cut(s)	328, 687, 741, 909
ScrFI	CCNGG	7 cut(s)	183, 226, 399, 617, 666, 1050, 1172
SduI	GDGCHC	1 cut(s)	547
SfaNI	GCATC	1 cut(s)	639
SgrAI	CRCCGGYG	1 cut(s)	148
SinI	GGWCC	3 cut(s)	722, 970, 1007
SphI	GCATGC	1 cut(s)	1244
Sse9I	AATT	9 cut(s)	421, 503, 510, 531, 918, 1110, 1204, 1218, 1500
SsiI	CCGC	5 cut(s)	146, 308, 356, 381, 865
SspMI	CTAG	2 cut(s)	831, 1199
StyD4I	CCNGG	7 cut(s)	181, 224, 397, 615, 664, 1048, 1170
StyI	CCWWGG	1 cut(s)	497
TaaI	ACNGT	4 cut(s)	469, 885, 1250, 1312
TaiI	ACGT	5 cut(s)	270, 326, 571, 1084, 1489
TaqI	TCGA	2 cut(s)	389, 735
TasI	AATT	9 cut(s)	421, 503, 510, 531, 918, 1110, 1204, 1218, 1500
TatI	WGTACW	2 cut(s)	156, 1139
TauI	GCSGC	2 cut(s)	310, 868
TfiI	GAWTC	2 cut(s)	90, 289
Tru1I	TTAA	2 cut(s)	1415, 1458
Tru9I	TTAA	2 cut(s)	1415, 1458
TscAI	CASTG	4 cut(s)	100, 748, 1129, 1255
TseFI	GTSAC	1 cut(s)	755
TseI	GCWGC	2 cut(s)	310, 634
Tsp45I	GTSAC	1 cut(s)	755
TspDTI	ATGAA	4 cut(s)	254, 767, 800, 837
TspGWI	ACGGA	6 cut(s)	455, 614, 893, 902, 1077, 1081
TspRI	CASTG	4 cut(s)	100, 748, 1129, 1255
Tth111I	GACNNNGTC	1 cut(s)	892
VneI	GTGCAC	1 cut(s)	543
VpaK11BI	GGWCC	3 cut(s)	722, 970, 1007
XapI	RAATTY	3 cut(s)	503, 1204, 1500
XceI	RCATGY	2 cut(s)	587, 1244
XmiI	GTMKAC	2 cut(s)	606, 995
XspI	CTAG	2 cut(s)	831, 1199
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	1 cut(s)	1141
Zsp2I	ATGCAT	1 cut(s)	1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.