Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002966

Physical Location & Seq

Genomic Coordinates Reverse (-)

75901629 .. 75916374

Gene Structure 14746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG477300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGTCTTGGTTCAGAAGCCTCATCCACGTCTCGGCGGCCAGAGCCTCATCCTCGTCGTCTTCAGCCAAATCCAGAATCACTGGCCCTTTCTCTTACTCTCTCCTCTCATGCTTCACCACCGAGGCCCGACCGCCGGCGTTGTACTCCGGCTTGGGGCCGACGAAGCCCGGCGAGAAGCCGAGGGTGGTGGTGCTGGGGACGGGGTGGGCCGGGTGTCGGCTCATGAAGGGGTTGGACACGAAGCTCTACGACGTCGTTTGTGTCTCGCCGAGGAATCACATGGTGTTCACGCCGCTGCTGGCGTCCACGTGTGTGGGCACTCTGGAGTTTAGGTCGGTGGCGGAGCCAATCGGGAGGATCCAACCCGCCATTTCGAGGGAGCCAGGGTCGTATTTCTTTCTCTCCAATTGTATTGGGCTTGATACGGATAAGCATTTGGTGCAATGTGAGACTGTAACTGATGGAGCTGATAACTTGGAGCCATGGAAATTTGAAATTGCCTACGACAAGCTGGTAATTGCATTGGGTGCACAGCCCACAACTTTCGGAATACGTGGTGTAGAAGAACATGCCATTTTTCTTCGTGAAGTCTACCATGCCCAGGAAATCCGTAGGAAGCTGCTCCTAAACTTGATGCTGTCGGATGTTCCCGGTGTTTCACAGGAAGAGAAAAGCAGACTCCTACATTGTGTTGTTGTAGGGGGTGGTCCCACCGGAGTCGAGTTCAGTGGTGAACTAAGTGACTTTATTCAGAAAGATGTTCATCAGAGATATGCCCATGTGAAAGATTACATTCATGTTACCTTGATTGAGGCTAGCGAGATCTTGTCTTCATTTGATGATCGCCTGCGGCGCTATGCTACAAAACAGTTGACAAAGTCAGGAGTTCGTCTTGTCCGTGGAATTGTGAAGGATGTCAAAGATAAGACGATAGTTCTCAATGATGGCACAGAGGTCCCTTATGGGCTATTGGTGTGGTCTACTGGTGTTGGTCCATCATCTTTTGTAAACTCTGTGCAACTTCCAAAAGCTCCTGGTGGAAGGATTGGTGTTGATGAGTGGCTACGTGTTCCGTCCGTGCAGGATGTGTTTTCAATTGGTGATTGCAGTGGTTTTCTTGAAAGTACTGGAAAACCAGTCCTTCCGGCTTTGGCCCAGGTTGCAGAGAGAGAAGGAAAATATCTAGCAAATTTACTGAACACAATTGGTGAAGCTGGTGGAGGGCATGCCAACAGTGCAAAAGAATATGTATACAAGGAACCTTTCGTTTACAAGCATTTAGGTAGCATGGCAACTGTTGGGAGATACAAAGCTCTTGTGGATCTGAGACAAAGCAAGGAAGCAAAAGGTTTATCTTTGGCTGGGTTTGTTAGTTGGTTTATTTGGCGCTCAGCATATTTAACAAGAGTTATAAGCTGGAGGAACAGATTTTATGTGGCGATTAACTGGCTTACGACTTTGGTGTTTGGACGTGATATAAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003954 GO:0003959 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0005777 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009987 GO:0016020 GO:0016491 GO:0016651 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031304 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0050896 GO:0051716 GO:0055114 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0098573 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

496

Amino Acids

54.67

Weight (kDa)

9.08

Isoelectric Point (pI)

35.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	61 - 392	4.6e-52	Pyridine nucleotide-disulphide oxidoreductase
NDH2_C	PF22366	426 - 492	6.2e-15	NDH2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07180 AT2G29990
fragaria_vesca	FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g38840
malus_domestica	MD03G1067100.v1.1 MD05G1323500.v1.1 MD10G1301300.v1.1
prunus_persica	Prupe.4G039000_v2.0.a1 Prupe.4G039000_v2.0.a1 Prupe.6G055600_v2.0.a1
pyrus_communis	pycom03g05350 pycom05g29800 pycom10g25410
rosa_chinensis	RchiOBHm_Chr5g0006761 RchiOBHm_Chr5g0070091
rosa_laevigata	RLG00000031427 RLG00000036113
rosa_multiflora	Rmu_sc0001044.1_g000041 Rmu_sc0002367.1_g000002
rosa_roxburghii	Rroxscaffold_1G00011050 Rroxscaffold_1G00069280
rosa_rugosa	Rorug04G0424200 Rorug04G0424300 Rorug05G0402300
rosa_samantha	Rh5AG052200 Rh5AG458700 Rh5BG051100 Rh5BG477300 Rh5CG059700 Rh5CG501000 Rh5DG489400
rosa_wichuraiana	Rw5G005230 Rw5G042810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1412
AatII	GACGTC	1 cut(s)	255
AccI	GTMKAC	3 cut(s)	591, 980, 1251
AciI	CCGC	6 cut(s)	35, 131, 293, 341, 366, 850
AclWI	GGATC	3 cut(s)	352, 365, 1329
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	3 cut(s)	488, 1189, 1485
AcuI	CTGAAG	1 cut(s)	45
AcvI	CACGTG	1 cut(s)	309
AcyI	GRCGYC	2 cut(s)	252, 302
AdeI	CACNNNGTG	1 cut(s)	283
AfaI	GTAC	2 cut(s)	143, 1126
AfiI	CCNNNNNNNGG	6 cut(s)	31, 133, 153, 216, 375, 601
AflIII	ACRYGT	2 cut(s)	308, 1066
AgsI	TTSAA	3 cut(s)	494, 1095, 1121
AjiI	CACGTC	2 cut(s)	28, 1472
AjnI	CCWGG	4 cut(s)	382, 600, 1033, 1155
AleI	CACNNNNGTG	1 cut(s)	311
AluBI	AGCT	8 cut(s)	244, 467, 511, 619, 1031, 1214, 1313, 1416
AluI	AGCT	8 cut(s)	244, 467, 511, 619, 1031, 1214, 1313, 1416
Alw21I	GWGCWC	1 cut(s)	532
Alw26I	GTCTC	4 cut(s)	34, 268, 443, 1321
Alw44I	GTGCAC	1 cut(s)	528
AlwI	GGATC	3 cut(s)	352, 365, 1329
AoxI	GGCC	6 cut(s)	36, 82, 123, 155, 207, 1152
ApaLI	GTGCAC	1 cut(s)	528
ApeKI	GCWGC	2 cut(s)	295, 619
ApoI	RAATTY	3 cut(s)	488, 1189, 1485
AspLEI	GCGC	2 cut(s)	855, 1389
AspS9I	GGNCC	8 cut(s)	83, 124, 155, 207, 707, 955, 992, 1153
AsuC2I	CCSGG	3 cut(s)	168, 211, 651
AsuHPI	GGTGA	4 cut(s)	106, 743, 1112, 1220
AsuNHI	GCTAGC	1 cut(s)	815
AvaII	GGWCC	3 cut(s)	707, 955, 992
BaeGI	GKGCMC	2 cut(s)	320, 532
BamHI	GGATCC	1 cut(s)	357
BbrPI	CACGTG	1 cut(s)	309
BbsI	GAAGAC	2 cut(s)	51, 822
Bbv12I	GWGCWC	1 cut(s)	532
BbvI	GCAGC	2 cut(s)	282, 606
BccI	CCATC	3 cut(s)	455, 938, 1003
BciT130I	CCWGG	4 cut(s)	384, 602, 1035, 1157
BcnI	CCSGG	3 cut(s)	168, 211, 651
BcoDI	GTCTC	4 cut(s)	34, 268, 443, 1321
BfaI	CTAG	2 cut(s)	816, 1184
BfoI	RGCGCY	2 cut(s)	856, 1390
BglII	AGATCT	1 cut(s)	822
BisI	GCNGC	5 cut(s)	36, 293, 296, 620, 851
BlpI	GCTNAGC	1 cut(s)	1390
BlsI	GCNGC	5 cut(s)	37, 294, 297, 621, 852
BmcAI	AGTACT	1 cut(s)	1126
Bme1390I	CCNGG	7 cut(s)	168, 211, 384, 602, 651, 1035, 1157
Bme18I	GGWCC	3 cut(s)	707, 955, 992
BmgBI	CACGTC	2 cut(s)	28, 1472
BmgT120I	GGNCC	8 cut(s)	83, 124, 155, 207, 707, 955, 992, 1153
BmiI	GGNNCC	8 cut(s)	156, 345, 359, 381, 480, 709, 957, 1260
BmrFI	CCNGG	7 cut(s)	168, 211, 384, 602, 651, 1035, 1157
BmsI	GCATC	1 cut(s)	624
BmtI	GCTAGC	1 cut(s)	819
BpiI	GAAGAC	2 cut(s)	51, 822
BpmI	CTGGAG	2 cut(s)	344, 1438
Bpu1102I	GCTNAGC	1 cut(s)	1390
BpuMI	CCSGG	3 cut(s)	168, 211, 651
BsaAI	YACGTR	3 cut(s)	309, 554, 1067
BsaBI	GATNNNNATC	1 cut(s)	762
BsaHI	GRCGYC	2 cut(s)	252, 302
BsaJI	CCNNGG	8 cut(s)	120, 179, 269, 383, 482, 600, 898, 1155
BsaWI	WCCGGW	1 cut(s)	713
BsaXI	ACNNNNNCTCC	4 cut(s)	317, 347, 371, 401
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 133, 153, 216, 375, 601
Bse118I	RCCGGY	1 cut(s)	133
Bse1I	ACTGG	5 cut(s)	85, 988, 1132, 1136, 1451
Bse3DI	GCAATG	1 cut(s)	449
Bse8I	GATNNNNATC	1 cut(s)	762
BseBI	CCWGG	4 cut(s)	384, 602, 1035, 1157
BseDI	CCNNGG	8 cut(s)	120, 179, 269, 383, 482, 600, 898, 1155
BseGI	GGATG	5 cut(s)	21, 47, 649, 919, 1090
BseJI	GATNNNNATC	1 cut(s)	762
BseLI	CCNNNNNNNGG	6 cut(s)	31, 133, 153, 216, 375, 601
BseMI	GCAATG	1 cut(s)	449
BseMII	CTCAG	2 cut(s)	1316, 1404
BseNI	ACTGG	5 cut(s)	85, 988, 1132, 1136, 1451
BseRI	GAGGAG	1 cut(s)	92
BseSI	GKGCMC	2 cut(s)	320, 532
BseXI	GCAGC	2 cut(s)	282, 606
BseYI	CCCAGC	2 cut(s)	193, 1361
BsgI	GTGCAG	1 cut(s)	1100
Bsh1285I	CGRYCG	1 cut(s)	131
BshFI	GGCC	6 cut(s)	38, 84, 125, 157, 209, 1154
BsiEI	CGRYCG	1 cut(s)	131
BsiHKAI	GWGCWC	1 cut(s)	532
BsiSI	CCGG	7 cut(s)	134, 147, 168, 210, 651, 714, 1145
BslFI	GGGAC	3 cut(s)	211, 693, 941
BslI	CCNNNNNNNGG	6 cut(s)	31, 133, 153, 216, 375, 601
BsmAI	GTCTC	4 cut(s)	34, 268, 443, 1321
BsmBI	CGTCTC	1 cut(s)	34
BsmFI	GGGAC	3 cut(s)	211, 693, 941
BsnI	GGCC	6 cut(s)	38, 84, 125, 157, 209, 1154
Bsp1286I	GDGCHC	2 cut(s)	320, 532
Bsp143I	GATC	4 cut(s)	357, 822, 841, 1321
Bsp1720I	GCTNAGC	1 cut(s)	1390
Bsp19I	CCATGG	1 cut(s)	482
BspACI	CCGC	6 cut(s)	35, 131, 293, 341, 366, 850
BspANI	GGCC	6 cut(s)	38, 84, 125, 157, 209, 1154
BspCNI	CTCAG	2 cut(s)	1317, 1403
BspHI	TCATGA	1 cut(s)	222
BspLI	GGNNCC	8 cut(s)	156, 345, 359, 381, 480, 709, 957, 1260
BspOI	GCTAGC	1 cut(s)	819
BspPI	GGATC	3 cut(s)	352, 365, 1329
BsrDI	GCAATG	1 cut(s)	449
BsrFI	RCCGGY	1 cut(s)	133
BsrI	ACTGG	5 cut(s)	85, 988, 1132, 1136, 1451
BssAI	RCCGGY	1 cut(s)	133
BssECI	CCNNGG	8 cut(s)	120, 179, 269, 383, 482, 600, 898, 1155
BssMI	GATC	4 cut(s)	357, 822, 841, 1321
BssNAI	GTATAC	1 cut(s)	1252
BssNI	GRCGYC	2 cut(s)	252, 302
BssT1I	CCWWGG	1 cut(s)	482
Bst1107I	GTATAC	1 cut(s)	1252
Bst2UI	CCWGG	4 cut(s)	384, 602, 1035, 1157
Bst4CI	ACNGT	4 cut(s)	454, 870, 1235, 1297
Bst6I	CTCTTC	1 cut(s)	660
BstACI	GRCGYC	2 cut(s)	252, 302
BstAPI	GCANNNNNTGC	2 cut(s)	439, 527
BstBAI	YACGTR	3 cut(s)	309, 554, 1067
BstC8I	GCNNGC	5 cut(s)	135, 300, 817, 848, 1227
BstDEI	CTNAG	3 cut(s)	737, 1325, 1390
BstDSI	CCRYGG	2 cut(s)	482, 898
BstF5I	GGATG	5 cut(s)	21, 47, 649, 919, 1090
BstH2I	RGCGCY	2 cut(s)	856, 1390
BstHHI	GCGC	2 cut(s)	855, 1389
BstKTI	GATC	4 cut(s)	360, 825, 844, 1324
BstMAI	GTCTC	4 cut(s)	34, 268, 443, 1321
BstMBI	GATC	4 cut(s)	357, 822, 841, 1321
BstMCI	CGRYCG	1 cut(s)	131
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 163, 439, 527, 852, 1160, 1235
BstNI	CCWGG	4 cut(s)	384, 602, 1035, 1157
BstNSI	RCATGY	2 cut(s)	572, 1229
BstSCI	CCNGG	7 cut(s)	166, 209, 382, 600, 649, 1033, 1155
BstSLI	GKGCMC	2 cut(s)	320, 532
BstV1I	GCAGC	2 cut(s)	282, 606
BstV2I	GAAGAC	2 cut(s)	51, 822
BstX2I	RGATCY	3 cut(s)	357, 822, 1321
BstXI	CCANNNNNNTGG	1 cut(s)	313
BstYI	RGATCY	3 cut(s)	357, 822, 1321
BstZ17I	GTATAC	1 cut(s)	1252
BsuRI	GGCC	6 cut(s)	38, 84, 125, 157, 209, 1154
BtgI	CCRYGG	2 cut(s)	482, 898
BtrI	CACGTC	2 cut(s)	28, 1472
BtsCI	GGATG	5 cut(s)	21, 47, 649, 919, 1090
BtsI	GCAGTG	1 cut(s)	1114
BtsIMutI	CAGTG	4 cut(s)	78, 733, 1114, 1240
Cac8I	GCNNGC	5 cut(s)	135, 300, 817, 848, 1227
CciI	TCATGA	1 cut(s)	222
CfoI	GCGC	2 cut(s)	855, 1389
Cfr10I	RCCGGY	1 cut(s)	133
Cfr13I	GGNCC	8 cut(s)	83, 124, 155, 207, 707, 955, 992, 1153
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	2 cut(s)	142, 1125
CviQI	GTAC	2 cut(s)	142, 1125
DdeI	CTNAG	3 cut(s)	737, 1325, 1390
DpnI	GATC	4 cut(s)	359, 824, 843, 1323
DpnII	GATC	4 cut(s)	357, 822, 841, 1321
DraIII	CACNNNGTG	1 cut(s)	283
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	1 cut(s)	660
EarI	CTCTTC	1 cut(s)	660
EciI	GGCGGA	1 cut(s)	356
Eco130I	CCWWGG	1 cut(s)	482
Eco47I	GGWCC	3 cut(s)	707, 955, 992
Eco57I	CTGAAG	1 cut(s)	45
Eco72I	CACGTG	1 cut(s)	309
EcoO109I	RGGNCCY	1 cut(s)	955
EcoRII	CCWGG	4 cut(s)	382, 600, 1033, 1155
EcoT14I	CCWWGG	1 cut(s)	482
ErhI	CCWWGG	1 cut(s)	482
Esp3I	CGTCTC	1 cut(s)	34
FaqI	GGGAC	3 cut(s)	211, 693, 941
FauI	CCCGC	1 cut(s)	373
FblI	GTMKAC	3 cut(s)	591, 980, 1251
Fnu4HI	GCNGC	5 cut(s)	36, 293, 296, 620, 851
FokI	GGATG	5 cut(s)	8, 34, 656, 926, 1097
Fsp4HI	GCNGC	5 cut(s)	36, 293, 296, 620, 851
FspBI	CTAG	2 cut(s)	816, 1184
GlaI	GCGC	2 cut(s)	854, 1388
GluI	GCNGC	5 cut(s)	36, 293, 296, 620, 851
GsaI	CCCAGC	2 cut(s)	197, 1365
GsuI	CTGGAG	2 cut(s)	344, 1438
HaeII	RGCGCY	2 cut(s)	856, 1390
HaeIII	GGCC	6 cut(s)	38, 84, 125, 157, 209, 1154
HapII	CCGG	7 cut(s)	134, 147, 168, 210, 651, 714, 1145
HgaI	GACGC	1 cut(s)	291
HhaI	GCGC	2 cut(s)	855, 1389
Hin1I	GRCGYC	2 cut(s)	252, 302
Hin6I	GCGC	2 cut(s)	853, 1387
HinP1I	GCGC	2 cut(s)	853, 1387
HincII	GTYRAC	1 cut(s)	873
HindII	GTYRAC	1 cut(s)	873
HinfI	GANTC	4 cut(s)	75, 274, 678, 717
HpaII	CCGG	7 cut(s)	134, 147, 168, 210, 651, 714, 1145
HphI	GGTGA	4 cut(s)	106, 743, 1112, 1220
Hpy188I	TCNGA	6 cut(s)	14, 548, 643, 753, 768, 1326
Hpy188III	TCNNGA	7 cut(s)	72, 223, 323, 352, 584, 882, 1118
Hpy99I	CGWCG	4 cut(s)	58, 163, 254, 257
HpyAV	CCTTC	5 cut(s)	220, 904, 1035, 1151, 1166
HpyCH4III	ACNGT	4 cut(s)	454, 870, 1235, 1297
HpyCH4IV	ACGT	6 cut(s)	27, 252, 308, 553, 1066, 1471
HpyCH4V	TGCA	8 cut(s)	442, 521, 530, 1018, 1081, 1107, 1163, 1238
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 163, 439, 527, 852, 1160, 1235
HpyF3I	CTNAG	3 cut(s)	737, 1325, 1390
HpySE526I	ACGT	6 cut(s)	27, 252, 308, 553, 1066, 1471
Hsp92I	GRCGYC	2 cut(s)	252, 302
HspAI	GCGC	2 cut(s)	853, 1387
KroI	GCCGGC	1 cut(s)	133
KroNI	GCCGGC	1 cut(s)	135
Kzo9I	GATC	4 cut(s)	357, 822, 841, 1321
LmnI	GCTCC	6 cut(s)	343, 379, 464, 478, 627, 1036
Lsp1109I	GCAGC	2 cut(s)	282, 606
LweI	GCATC	1 cut(s)	624
MaeI	CTAG	2 cut(s)	816, 1184
MaeII	ACGT	6 cut(s)	27, 252, 308, 553, 1066, 1471
MaeIII	GTNAC	3 cut(s)	454, 740, 799
MalI	GATC	4 cut(s)	359, 824, 843, 1323
MboI	GATC	4 cut(s)	357, 822, 841, 1321
MboII	GAAGA	5 cut(s)	51, 572, 575, 677, 822
MfeI	CAATTG	3 cut(s)	406, 1095, 1203
MflI	RGATCY	3 cut(s)	357, 822, 1321
MhlI	GDGCHC	2 cut(s)	320, 532
MluCI	AATT	9 cut(s)	406, 488, 495, 516, 903, 1095, 1189, 1203, 1485
MlyI	GAGTC	2 cut(s)	672, 726
MmeI	TCCRAC	3 cut(s)	213, 385, 621
MreI	CGCCGGCG	1 cut(s)	133
MroNI	GCCGGC	1 cut(s)	133
MseI	TTAA	2 cut(s)	1400, 1443
MslI	CAYNNNNRTG	1 cut(s)	311
MspA1I	CMGCKG	1 cut(s)	295
MspI	CCGG	7 cut(s)	134, 147, 168, 210, 651, 714, 1145
MspR9I	CCNGG	7 cut(s)	168, 211, 384, 602, 651, 1035, 1157
MunI	CAATTG	3 cut(s)	406, 1095, 1203
MvaI	CCWGG	4 cut(s)	384, 602, 1035, 1157
MwoI	GCNNNNNNNGC	7 cut(s)	41, 163, 439, 527, 852, 1160, 1235
NaeI	GCCGGC	1 cut(s)	135
NciI	CCSGG	3 cut(s)	168, 211, 651
NcoI	CCATGG	1 cut(s)	482
NdeII	GATC	4 cut(s)	357, 822, 841, 1321
NgoMIV	GCCGGC	1 cut(s)	133
NheI	GCTAGC	1 cut(s)	815
NlaIV	GGNNCC	8 cut(s)	156, 345, 359, 381, 480, 709, 957, 1260
NmeAIII	GCCGAG	3 cut(s)	11, 204, 294
NmuCI	GTSAC	1 cut(s)	740
NspI	RCATGY	2 cut(s)	572, 1229
OliI	CACNNNNGTG	1 cut(s)	311
PaeI	GCATGC	1 cut(s)	1229
PagI	TCATGA	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	1 cut(s)	895
PdiI	GCCGGC	1 cut(s)	135
PfeI	GAWTC	2 cut(s)	75, 274
PflFI	GACNNNGTC	1 cut(s)	877
PkrI	GCNGC	5 cut(s)	37, 294, 297, 621, 852
PleI	GAGTC	2 cut(s)	672, 725
PmaCI	CACGTG	1 cut(s)	309
PmlI	CACGTG	1 cut(s)	309
PpsI	GAGTC	2 cut(s)	672, 725
Ppu21I	YACGTR	3 cut(s)	309, 554, 1067
PpuMI	RGGWCCY	1 cut(s)	955
PsiI	TTATAA	1 cut(s)	1412
Psp5II	RGGWCCY	1 cut(s)	955
Psp6I	CCWGG	4 cut(s)	382, 600, 1033, 1155
PspCI	CACGTG	1 cut(s)	309
PspFI	CCCAGC	2 cut(s)	193, 1361
PspGI	CCWGG	4 cut(s)	382, 600, 1033, 1155
PspN4I	GGNNCC	8 cut(s)	156, 345, 359, 381, 480, 709, 957, 1260
PspPI	GGNCC	8 cut(s)	83, 124, 155, 207, 707, 955, 992, 1153
PspPPI	RGGWCCY	1 cut(s)	955
PsuI	RGATCY	3 cut(s)	357, 822, 1321
PsyI	GACNNNGTC	1 cut(s)	877
RsaI	GTAC	2 cut(s)	143, 1126
RsaNI	GTAC	2 cut(s)	142, 1125
RseI	CAYNNNNRTG	1 cut(s)	311
SaqAI	TTAA	2 cut(s)	1400, 1443
SatI	GCNGC	5 cut(s)	36, 293, 296, 620, 851
Sau3AI	GATC	4 cut(s)	357, 822, 841, 1321
Sau96I	GGNCC	8 cut(s)	83, 124, 155, 207, 707, 955, 992, 1153
ScaI	AGTACT	1 cut(s)	1126
SchI	GAGTC	2 cut(s)	672, 726
ScrFI	CCNGG	7 cut(s)	168, 211, 384, 602, 651, 1035, 1157
SduI	GDGCHC	2 cut(s)	320, 532
SfaNI	GCATC	1 cut(s)	624
SgrAI	CRCCGGYG	1 cut(s)	133
SinI	GGWCC	3 cut(s)	707, 955, 992
SmiMI	CAYNNNNRTG	1 cut(s)	311
SphI	GCATGC	1 cut(s)	1229
Sse9I	AATT	9 cut(s)	406, 488, 495, 516, 903, 1095, 1189, 1203, 1485
SsiI	CCGC	6 cut(s)	35, 131, 293, 341, 366, 850
SspMI	CTAG	2 cut(s)	816, 1184
StyD4I	CCNGG	7 cut(s)	166, 209, 382, 600, 649, 1033, 1155
StyI	CCWWGG	1 cut(s)	482
TaaI	ACNGT	4 cut(s)	454, 870, 1235, 1297
TaiI	ACGT	6 cut(s)	30, 255, 311, 556, 1069, 1474
TaqI	TCGA	2 cut(s)	374, 720
TasI	AATT	9 cut(s)	406, 488, 495, 516, 903, 1095, 1189, 1203, 1485
TatI	WGTACW	2 cut(s)	141, 1124
TauI	GCSGC	3 cut(s)	38, 295, 853
TfiI	GAWTC	2 cut(s)	75, 274
Tru1I	TTAA	2 cut(s)	1400, 1443
Tru9I	TTAA	2 cut(s)	1400, 1443
TscAI	CASTG	4 cut(s)	85, 733, 1114, 1240
TseFI	GTSAC	1 cut(s)	740
TseI	GCWGC	2 cut(s)	295, 619
Tsp45I	GTSAC	1 cut(s)	740
TspDTI	ATGAA	4 cut(s)	239, 752, 785, 822
TspGWI	ACGGA	5 cut(s)	440, 599, 887, 1062, 1066
TspRI	CASTG	4 cut(s)	85, 733, 1114, 1240
Tth111I	GACNNNGTC	1 cut(s)	877
VneI	GTGCAC	1 cut(s)	528
VpaK11BI	GGWCC	3 cut(s)	707, 955, 992
XapI	RAATTY	3 cut(s)	488, 1189, 1485
XceI	RCATGY	2 cut(s)	572, 1229
XmiI	GTMKAC	3 cut(s)	591, 980, 1251
XspI	CTAG	2 cut(s)	816, 1184
ZraI	GACGTC	1 cut(s)	253
ZrmI	AGTACT	1 cut(s)	1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.