Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002966

Physical Location & Seq

Genomic Coordinates Reverse (-)

76888463 .. 76899987

Gene Structure 11525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG489400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGTCTTGGTTCAGAAGCCTCATCCACGTCTCGGCGGCCAGAGCCTACTCATCATCCTCCTCGTCTTCAGCCAAATCCAGAATCACTGACCCTTTCTCTTACTCTCTCCTCTCATGCTTCACCACCGAGGCCCGACCGCCGGCGTTGTACTCCGGCTTGGGGGCGACGAAGCCCGGCGAGAAGCCGAGGGTGGTGGTGCTGGGGACGGGGTGGGCCGGGTGTCGGCTCATGAAGGGGTTGGACACGAAGCTCTACGACGTCGTTTGCGTCTCGCCGAGGAATCACATGGTGTTCACGCCGCTGCTGGCGTCCACGTGTGTGGGCACTCTGGAGTTTAGGTCGGTGGCGGAGCCAATCGGGAGGATCCAACCCGCCATTTCGAGGGAGCCAGGGTCTTATTTCTTTCTCTCCAATTGTATTGGGCTTGATACGGATAAGCATTTGGTGCAATGTGAGACTGTAACTGATGGAGCTGATAACTTGGAGCCATGGAAATTTGAAATTGCCTACGACAAGCTGGTAATTGCATTGGGTGCACAGCCCACAACTTTCGGAATACGTGGTGTAGAAGAACATGCCATTTTTCTTCGCGAAGTCTACCATGCCCAGGAAATCCGTAGGAAGCTGCTCCTAAACTTGATGCTATCGGAAGTTCCCGGTGTTTCAGAGGAAGAGAAAAGCAGACTCCTACATTGTGTTGTTGTAGGAGGTGGTCCCACCGGAGTTGAGTTCAGTGGTGAACTAAGTGACTTTATTCAGAAAGATGTTCATCAGAGATATGCCCATGTGAAAGATTACATTCATGTTACCTTGATTGAGGCTAGCGAGATATTGTCTTCATTTGATGATCGCCTGCGGCGCTATGCTACAAAACAGTTGACAAAGTCAGGAGTTCGTCTTGTCCGTGGAATTGTGAAGGATGTCAAAGATAAGACGATAGTTCTCAATGATGGCACAGAGGTCCCTTATGGGCTATTGGTGTGGTCTACTGGTGTTGGTCCATCATCTTTTGTAAACTCTGTGCAACTTCCAAAAGCTCCTGGTGGAAGGATTGGTGTTGATGAATGGCTACGTGTTCCGTCCGTGCAGGATGTGTTTTCAATTGGTGATTGCAGTGGTTTTCTTGAAAGTACTGGAAAACCAGTCCTTCCGGCTTTGGCCCAGGTTGCAGAGAGAGAAGGAAAATATCTAGCAAATTTACTGAACAAAATTGGTGAAGCTGGTGGAGGGCATGCCAACAGTGCAAAAGAATATGTATACAAGGAACCTTTTGTTTACAAGCATTTAGGTAGCATGGCAACTGTTGGGAGATACAAAGCTCTTGTGGATCTGAGACAAAGCAAGGAAGCAAAAGGTTTATCTTTGGCTGGGTTTGTTAGTTGGTTTATTTGGCGCTCAGCATATTTAACAAGAGTTATAAGCTGGAGGAACAGATTTTATGTGGCGATTAACTGGCTTACGACTTTGGTGTTTGGACGTGATATAAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003954 GO:0003959 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0005777 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009987 GO:0016020 GO:0016491 GO:0016651 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031304 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0050896 GO:0051716 GO:0055114 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0098573 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

498

Amino Acids

54.99

Weight (kDa)

8.99

Isoelectric Point (pI)

36.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	63 - 394	4.7e-52	Pyridine nucleotide-disulphide oxidoreductase
NDH2_C	PF22366	428 - 494	6.2e-15	NDH2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002966)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07180 AT2G29990
fragaria_vesca	FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g04370 FvH4_3g38840
malus_domestica	MD03G1067100.v1.1 MD05G1323500.v1.1 MD10G1301300.v1.1
prunus_persica	Prupe.4G039000_v2.0.a1 Prupe.4G039000_v2.0.a1 Prupe.6G055600_v2.0.a1
pyrus_communis	pycom03g05350 pycom05g29800 pycom10g25410
rosa_chinensis	RchiOBHm_Chr5g0006761 RchiOBHm_Chr5g0070091
rosa_laevigata	RLG00000031427 RLG00000036113
rosa_multiflora	Rmu_sc0001044.1_g000041 Rmu_sc0002367.1_g000002
rosa_roxburghii	Rroxscaffold_1G00011050 Rroxscaffold_1G00069280
rosa_rugosa	Rorug04G0424200 Rorug04G0424300 Rorug05G0402300
rosa_samantha	Rh5AG052200 Rh5AG458700 Rh5BG051100 Rh5BG477300 Rh5CG059700 Rh5CG501000 Rh5DG489400
rosa_wichuraiana	Rw5G005230 Rw5G042810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1418
AatII	GACGTC	1 cut(s)	261
AccI	GTMKAC	3 cut(s)	597, 986, 1257
AccII	CGCG	1 cut(s)	591
AciI	CCGC	6 cut(s)	35, 137, 299, 347, 372, 856
AclWI	GGATC	3 cut(s)	358, 371, 1335
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	3 cut(s)	494, 1195, 1491
AcuI	CTGAAG	1 cut(s)	51
AcvI	CACGTG	1 cut(s)	315
AcyI	GRCGYC	2 cut(s)	258, 308
AdeI	CACNNNGTG	1 cut(s)	289
AfaI	GTAC	2 cut(s)	149, 1132
AfiI	CCNNNNNNNGG	6 cut(s)	31, 139, 159, 222, 381, 607
AflIII	ACRYGT	2 cut(s)	314, 1072
AgsI	TTSAA	3 cut(s)	500, 1101, 1127
AjiI	CACGTC	2 cut(s)	28, 1478
AjnI	CCWGG	4 cut(s)	388, 606, 1039, 1161
AleI	CACNNNNGTG	1 cut(s)	317
AluBI	AGCT	8 cut(s)	250, 473, 517, 625, 1037, 1220, 1319, 1422
AluI	AGCT	8 cut(s)	250, 473, 517, 625, 1037, 1220, 1319, 1422
Alw21I	GWGCWC	1 cut(s)	538
Alw26I	GTCTC	4 cut(s)	34, 274, 449, 1327
Alw44I	GTGCAC	1 cut(s)	534
AlwI	GGATC	3 cut(s)	358, 371, 1335
AoxI	GGCC	4 cut(s)	36, 129, 213, 1158
ApaLI	GTGCAC	1 cut(s)	534
ApeKI	GCWGC	2 cut(s)	301, 625
ApoI	RAATTY	3 cut(s)	494, 1195, 1491
AspLEI	GCGC	2 cut(s)	861, 1395
AspS9I	GGNCC	6 cut(s)	130, 213, 713, 961, 998, 1159
AsuC2I	CCSGG	3 cut(s)	174, 217, 657
AsuHPI	GGTGA	4 cut(s)	112, 749, 1118, 1226
AsuNHI	GCTAGC	1 cut(s)	821
AvaII	GGWCC	3 cut(s)	713, 961, 998
BaeGI	GKGCMC	2 cut(s)	326, 538
BamHI	GGATCC	1 cut(s)	363
BbrPI	CACGTG	1 cut(s)	315
BbsI	GAAGAC	2 cut(s)	57, 828
Bbv12I	GWGCWC	1 cut(s)	538
BbvI	GCAGC	2 cut(s)	288, 612
BccI	CCATC	3 cut(s)	461, 944, 1009
BciT130I	CCWGG	4 cut(s)	390, 608, 1041, 1163
BcnI	CCSGG	3 cut(s)	174, 217, 657
BcoDI	GTCTC	4 cut(s)	34, 274, 449, 1327
BfaI	CTAG	2 cut(s)	822, 1190
BfoI	RGCGCY	2 cut(s)	862, 1396
BisI	GCNGC	5 cut(s)	36, 299, 302, 626, 857
BlpI	GCTNAGC	1 cut(s)	1396
BlsI	GCNGC	5 cut(s)	37, 300, 303, 627, 858
BmcAI	AGTACT	1 cut(s)	1132
Bme1390I	CCNGG	7 cut(s)	174, 217, 390, 608, 657, 1041, 1163
Bme18I	GGWCC	3 cut(s)	713, 961, 998
BmgBI	CACGTC	2 cut(s)	28, 1478
BmgT120I	GGNCC	6 cut(s)	130, 213, 713, 961, 998, 1159
BmiI	GGNNCC	7 cut(s)	351, 365, 387, 486, 715, 963, 1266
BmrFI	CCNGG	7 cut(s)	174, 217, 390, 608, 657, 1041, 1163
BmsI	GCATC	1 cut(s)	630
BmtI	GCTAGC	1 cut(s)	825
BpiI	GAAGAC	2 cut(s)	57, 828
BpmI	CTGGAG	2 cut(s)	350, 1444
Bpu1102I	GCTNAGC	1 cut(s)	1396
BpuMI	CCSGG	3 cut(s)	174, 217, 657
BsaAI	YACGTR	3 cut(s)	315, 560, 1073
BsaBI	GATNNNNATC	1 cut(s)	768
BsaHI	GRCGYC	2 cut(s)	258, 308
BsaJI	CCNNGG	8 cut(s)	126, 185, 275, 389, 488, 606, 904, 1161
BsaWI	WCCGGW	1 cut(s)	719
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 377, 407
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 139, 159, 222, 381, 607
Bse118I	RCCGGY	1 cut(s)	139
Bse1I	ACTGG	4 cut(s)	994, 1138, 1142, 1457
Bse3DI	GCAATG	1 cut(s)	455
Bse8I	GATNNNNATC	1 cut(s)	768
BseBI	CCWGG	4 cut(s)	390, 608, 1041, 1163
BseDI	CCNNGG	8 cut(s)	126, 185, 275, 389, 488, 606, 904, 1161
BseGI	GGATG	4 cut(s)	21, 53, 925, 1096
BseJI	GATNNNNATC	1 cut(s)	768
BseLI	CCNNNNNNNGG	6 cut(s)	31, 139, 159, 222, 381, 607
BseMI	GCAATG	1 cut(s)	455
BseMII	CTCAG	2 cut(s)	1322, 1410
BseNI	ACTGG	4 cut(s)	994, 1138, 1142, 1457
BseRI	GAGGAG	2 cut(s)	49, 98
BseSI	GKGCMC	2 cut(s)	326, 538
BseXI	GCAGC	2 cut(s)	288, 612
BseYI	CCCAGC	2 cut(s)	199, 1367
BsgI	GTGCAG	1 cut(s)	1106
Bsh1236I	CGCG	1 cut(s)	591
Bsh1285I	CGRYCG	1 cut(s)	137
BshFI	GGCC	4 cut(s)	38, 131, 215, 1160
BsiEI	CGRYCG	1 cut(s)	137
BsiHKAI	GWGCWC	1 cut(s)	538
BsiSI	CCGG	7 cut(s)	140, 153, 174, 216, 657, 720, 1151
BslFI	GGGAC	3 cut(s)	217, 699, 947
BslI	CCNNNNNNNGG	6 cut(s)	31, 139, 159, 222, 381, 607
BsmAI	GTCTC	4 cut(s)	34, 274, 449, 1327
BsmBI	CGTCTC	2 cut(s)	34, 274
BsmFI	GGGAC	3 cut(s)	217, 699, 947
BsnI	GGCC	4 cut(s)	38, 131, 215, 1160
Bsp1286I	GDGCHC	2 cut(s)	326, 538
Bsp143I	GATC	3 cut(s)	363, 847, 1327
Bsp1720I	GCTNAGC	1 cut(s)	1396
Bsp19I	CCATGG	1 cut(s)	488
Bsp68I	TCGCGA	1 cut(s)	591
BspACI	CCGC	6 cut(s)	35, 137, 299, 347, 372, 856
BspANI	GGCC	4 cut(s)	38, 131, 215, 1160
BspCNI	CTCAG	2 cut(s)	1323, 1409
BspFNI	CGCG	1 cut(s)	591
BspHI	TCATGA	1 cut(s)	228
BspLI	GGNNCC	7 cut(s)	351, 365, 387, 486, 715, 963, 1266
BspOI	GCTAGC	1 cut(s)	825
BspPI	GGATC	3 cut(s)	358, 371, 1335
BsrDI	GCAATG	1 cut(s)	455
BsrFI	RCCGGY	1 cut(s)	139
BsrI	ACTGG	4 cut(s)	994, 1138, 1142, 1457
BssAI	RCCGGY	1 cut(s)	139
BssECI	CCNNGG	8 cut(s)	126, 185, 275, 389, 488, 606, 904, 1161
BssMI	GATC	3 cut(s)	363, 847, 1327
BssNAI	GTATAC	1 cut(s)	1258
BssNI	GRCGYC	2 cut(s)	258, 308
BssT1I	CCWWGG	1 cut(s)	488
Bst1107I	GTATAC	1 cut(s)	1258
Bst2UI	CCWGG	4 cut(s)	390, 608, 1041, 1163
Bst4CI	ACNGT	4 cut(s)	460, 876, 1241, 1303
Bst6I	CTCTTC	1 cut(s)	666
BstACI	GRCGYC	2 cut(s)	258, 308
BstAPI	GCANNNNNTGC	2 cut(s)	445, 533
BstBAI	YACGTR	3 cut(s)	315, 560, 1073
BstC8I	GCNNGC	5 cut(s)	141, 306, 823, 854, 1233
BstDEI	CTNAG	3 cut(s)	743, 1331, 1396
BstDSI	CCRYGG	2 cut(s)	488, 904
BstF5I	GGATG	4 cut(s)	21, 53, 925, 1096
BstFNI	CGCG	1 cut(s)	591
BstH2I	RGCGCY	2 cut(s)	862, 1396
BstHHI	GCGC	2 cut(s)	861, 1395
BstKTI	GATC	3 cut(s)	366, 850, 1330
BstMAI	GTCTC	4 cut(s)	34, 274, 449, 1327
BstMBI	GATC	3 cut(s)	363, 847, 1327
BstMCI	CGRYCG	1 cut(s)	137
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 445, 533, 858, 1166, 1241
BstNI	CCWGG	4 cut(s)	390, 608, 1041, 1163
BstNSI	RCATGY	2 cut(s)	578, 1235
BstSCI	CCNGG	7 cut(s)	172, 215, 388, 606, 655, 1039, 1161
BstSLI	GKGCMC	2 cut(s)	326, 538
BstUI	CGCG	1 cut(s)	591
BstV1I	GCAGC	2 cut(s)	288, 612
BstV2I	GAAGAC	2 cut(s)	57, 828
BstX2I	RGATCY	2 cut(s)	363, 1327
BstXI	CCANNNNNNTGG	1 cut(s)	319
BstYI	RGATCY	2 cut(s)	363, 1327
BstZ17I	GTATAC	1 cut(s)	1258
BsuRI	GGCC	4 cut(s)	38, 131, 215, 1160
BtgI	CCRYGG	2 cut(s)	488, 904
BtrI	CACGTC	2 cut(s)	28, 1478
BtsCI	GGATG	4 cut(s)	21, 53, 925, 1096
BtsI	GCAGTG	1 cut(s)	1120
BtsIMutI	CAGTG	4 cut(s)	84, 739, 1120, 1246
BtuMI	TCGCGA	1 cut(s)	591
Cac8I	GCNNGC	5 cut(s)	141, 306, 823, 854, 1233
CciI	TCATGA	1 cut(s)	228
CfoI	GCGC	2 cut(s)	861, 1395
Cfr10I	RCCGGY	1 cut(s)	139
Cfr13I	GGNCC	6 cut(s)	130, 213, 713, 961, 998, 1159
CseI	GACGC	2 cut(s)	256, 297
Csp6I	GTAC	2 cut(s)	148, 1131
CspCI	CAANNNNNGTGG	2 cut(s)	706, 741
CviQI	GTAC	2 cut(s)	148, 1131
DdeI	CTNAG	3 cut(s)	743, 1331, 1396
DpnI	GATC	3 cut(s)	365, 849, 1329
DpnII	GATC	3 cut(s)	363, 847, 1327
DraIII	CACNNNGTG	1 cut(s)	289
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	1 cut(s)	666
EarI	CTCTTC	1 cut(s)	666
EciI	GGCGGA	1 cut(s)	362
Eco130I	CCWWGG	1 cut(s)	488
Eco47I	GGWCC	3 cut(s)	713, 961, 998
Eco57I	CTGAAG	1 cut(s)	51
Eco72I	CACGTG	1 cut(s)	315
EcoO109I	RGGNCCY	1 cut(s)	961
EcoRII	CCWGG	4 cut(s)	388, 606, 1039, 1161
EcoT14I	CCWWGG	1 cut(s)	488
ErhI	CCWWGG	1 cut(s)	488
Esp3I	CGTCTC	2 cut(s)	34, 274
FaqI	GGGAC	3 cut(s)	217, 699, 947
FauI	CCCGC	1 cut(s)	379
FblI	GTMKAC	3 cut(s)	597, 986, 1257
Fnu4HI	GCNGC	5 cut(s)	36, 299, 302, 626, 857
FokI	GGATG	4 cut(s)	8, 40, 932, 1103
Fsp4HI	GCNGC	5 cut(s)	36, 299, 302, 626, 857
FspBI	CTAG	2 cut(s)	822, 1190
GlaI	GCGC	2 cut(s)	860, 1394
GluI	GCNGC	5 cut(s)	36, 299, 302, 626, 857
GsaI	CCCAGC	2 cut(s)	203, 1371
GsuI	CTGGAG	2 cut(s)	350, 1444
HaeII	RGCGCY	2 cut(s)	862, 1396
HaeIII	GGCC	4 cut(s)	38, 131, 215, 1160
HapII	CCGG	7 cut(s)	140, 153, 174, 216, 657, 720, 1151
HgaI	GACGC	2 cut(s)	256, 297
HhaI	GCGC	2 cut(s)	861, 1395
Hin1I	GRCGYC	2 cut(s)	258, 308
Hin6I	GCGC	2 cut(s)	859, 1393
HinP1I	GCGC	2 cut(s)	859, 1393
HincII	GTYRAC	1 cut(s)	879
HindII	GTYRAC	1 cut(s)	879
HinfI	GANTC	3 cut(s)	81, 280, 684
HpaII	CCGG	7 cut(s)	140, 153, 174, 216, 657, 720, 1151
HphI	GGTGA	4 cut(s)	112, 749, 1118, 1226
Hpy188I	TCNGA	7 cut(s)	14, 554, 649, 667, 759, 774, 1332
Hpy188III	TCNNGA	7 cut(s)	78, 229, 329, 358, 590, 888, 1124
Hpy99I	CGWCG	3 cut(s)	169, 260, 263
HpyAV	CCTTC	5 cut(s)	226, 910, 1041, 1157, 1172
HpyCH4III	ACNGT	4 cut(s)	460, 876, 1241, 1303
HpyCH4IV	ACGT	6 cut(s)	27, 258, 314, 559, 1072, 1477
HpyCH4V	TGCA	8 cut(s)	448, 527, 536, 1024, 1087, 1113, 1169, 1244
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 445, 533, 858, 1166, 1241
HpyF3I	CTNAG	3 cut(s)	743, 1331, 1396
HpySE526I	ACGT	6 cut(s)	27, 258, 314, 559, 1072, 1477
Hsp92I	GRCGYC	2 cut(s)	258, 308
HspAI	GCGC	2 cut(s)	859, 1393
KroI	GCCGGC	1 cut(s)	139
KroNI	GCCGGC	1 cut(s)	141
Kzo9I	GATC	3 cut(s)	363, 847, 1327
LmnI	GCTCC	6 cut(s)	349, 385, 470, 484, 633, 1042
Lsp1109I	GCAGC	2 cut(s)	288, 612
LweI	GCATC	1 cut(s)	630
MaeI	CTAG	2 cut(s)	822, 1190
MaeII	ACGT	6 cut(s)	27, 258, 314, 559, 1072, 1477
MaeIII	GTNAC	3 cut(s)	460, 746, 805
MalI	GATC	3 cut(s)	365, 849, 1329
MboI	GATC	3 cut(s)	363, 847, 1327
MboII	GAAGA	5 cut(s)	57, 578, 581, 683, 828
MfeI	CAATTG	2 cut(s)	412, 1101
MflI	RGATCY	2 cut(s)	363, 1327
MhlI	GDGCHC	2 cut(s)	326, 538
MluCI	AATT	9 cut(s)	412, 494, 501, 522, 909, 1101, 1195, 1209, 1491
MlyI	GAGTC	1 cut(s)	678
MmeI	TCCRAC	2 cut(s)	219, 391
MreI	CGCCGGCG	1 cut(s)	139
MroNI	GCCGGC	1 cut(s)	139
MseI	TTAA	2 cut(s)	1406, 1449
MslI	CAYNNNNRTG	1 cut(s)	317
MspA1I	CMGCKG	1 cut(s)	301
MspI	CCGG	7 cut(s)	140, 153, 174, 216, 657, 720, 1151
MspR9I	CCNGG	7 cut(s)	174, 217, 390, 608, 657, 1041, 1163
MunI	CAATTG	2 cut(s)	412, 1101
MvaI	CCWGG	4 cut(s)	390, 608, 1041, 1163
MvnI	CGCG	1 cut(s)	591
MwoI	GCNNNNNNNGC	6 cut(s)	41, 445, 533, 858, 1166, 1241
NaeI	GCCGGC	1 cut(s)	141
NciI	CCSGG	3 cut(s)	174, 217, 657
NcoI	CCATGG	1 cut(s)	488
NdeII	GATC	3 cut(s)	363, 847, 1327
NgoMIV	GCCGGC	1 cut(s)	139
NheI	GCTAGC	1 cut(s)	821
NlaIV	GGNNCC	7 cut(s)	351, 365, 387, 486, 715, 963, 1266
NmeAIII	GCCGAG	3 cut(s)	11, 210, 300
NmuCI	GTSAC	1 cut(s)	746
NruI	TCGCGA	1 cut(s)	591
NspI	RCATGY	2 cut(s)	578, 1235
OliI	CACNNNNGTG	1 cut(s)	317
PaeI	GCATGC	1 cut(s)	1235
PagI	TCATGA	1 cut(s)	228
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 901
PdiI	GCCGGC	1 cut(s)	141
PfeI	GAWTC	2 cut(s)	81, 280
PflFI	GACNNNGTC	1 cut(s)	883
PkrI	GCNGC	5 cut(s)	37, 300, 303, 627, 858
PleI	GAGTC	1 cut(s)	678
PmaCI	CACGTG	1 cut(s)	315
PmlI	CACGTG	1 cut(s)	315
PpsI	GAGTC	1 cut(s)	678
Ppu21I	YACGTR	3 cut(s)	315, 560, 1073
PpuMI	RGGWCCY	1 cut(s)	961
PsiI	TTATAA	1 cut(s)	1418
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	4 cut(s)	388, 606, 1039, 1161
PspCI	CACGTG	1 cut(s)	315
PspFI	CCCAGC	2 cut(s)	199, 1367
PspGI	CCWGG	4 cut(s)	388, 606, 1039, 1161
PspN4I	GGNNCC	7 cut(s)	351, 365, 387, 486, 715, 963, 1266
PspPI	GGNCC	6 cut(s)	130, 213, 713, 961, 998, 1159
PspPPI	RGGWCCY	1 cut(s)	961
PsuI	RGATCY	2 cut(s)	363, 1327
PsyI	GACNNNGTC	1 cut(s)	883
RruI	TCGCGA	1 cut(s)	591
RsaI	GTAC	2 cut(s)	149, 1132
RsaNI	GTAC	2 cut(s)	148, 1131
RseI	CAYNNNNRTG	1 cut(s)	317
SaqAI	TTAA	2 cut(s)	1406, 1449
SatI	GCNGC	5 cut(s)	36, 299, 302, 626, 857
Sau3AI	GATC	3 cut(s)	363, 847, 1327
Sau96I	GGNCC	6 cut(s)	130, 213, 713, 961, 998, 1159
ScaI	AGTACT	1 cut(s)	1132
SchI	GAGTC	1 cut(s)	678
ScrFI	CCNGG	7 cut(s)	174, 217, 390, 608, 657, 1041, 1163
SduI	GDGCHC	2 cut(s)	326, 538
SfaNI	GCATC	1 cut(s)	630
SgrAI	CRCCGGYG	1 cut(s)	139
SinI	GGWCC	3 cut(s)	713, 961, 998
SmiMI	CAYNNNNRTG	1 cut(s)	317
SphI	GCATGC	1 cut(s)	1235
Sse9I	AATT	9 cut(s)	412, 494, 501, 522, 909, 1101, 1195, 1209, 1491
SsiI	CCGC	6 cut(s)	35, 137, 299, 347, 372, 856
SspMI	CTAG	2 cut(s)	822, 1190
StyD4I	CCNGG	7 cut(s)	172, 215, 388, 606, 655, 1039, 1161
StyI	CCWWGG	1 cut(s)	488
TaaI	ACNGT	4 cut(s)	460, 876, 1241, 1303
TaiI	ACGT	6 cut(s)	30, 261, 317, 562, 1075, 1480
TaqI	TCGA	1 cut(s)	380
TasI	AATT	9 cut(s)	412, 494, 501, 522, 909, 1101, 1195, 1209, 1491
TatI	WGTACW	2 cut(s)	147, 1130
TauI	GCSGC	3 cut(s)	38, 301, 859
TfiI	GAWTC	2 cut(s)	81, 280
Tru1I	TTAA	2 cut(s)	1406, 1449
Tru9I	TTAA	2 cut(s)	1406, 1449
TscAI	CASTG	4 cut(s)	91, 739, 1120, 1246
TseFI	GTSAC	1 cut(s)	746
TseI	GCWGC	2 cut(s)	301, 625
Tsp45I	GTSAC	1 cut(s)	746
TspDTI	ATGAA	5 cut(s)	245, 758, 791, 828, 1077
TspGWI	ACGGA	5 cut(s)	446, 605, 893, 1068, 1072
TspRI	CASTG	4 cut(s)	91, 739, 1120, 1246
Tth111I	GACNNNGTC	1 cut(s)	883
VneI	GTGCAC	1 cut(s)	534
VpaK11BI	GGWCC	3 cut(s)	713, 961, 998
XapI	RAATTY	3 cut(s)	494, 1195, 1491
XceI	RCATGY	2 cut(s)	578, 1235
XmiI	GTMKAC	3 cut(s)	597, 986, 1257
XspI	CTAG	2 cut(s)	822, 1190
ZraI	GACGTC	1 cut(s)	259
ZrmI	AGTACT	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.