MD03G1283400.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
36340647 .. 36344425
3779 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1283400.v1.1.491

Sequence Viewer

Length: 1428 bp
ATGAAGGGAGCGCTGGCGAGGCTTCAGCTAGGGGAAACCCTGAACCAATCGTCGTTTTCCACGTCATCATCCAACCCCTCTCGCTTCCAGAACCTTGTAGAAGCCCGAGCCGCCGACGGCAGCCTTCCCTCCTCCGCTCCCCTCGGCACCGACGTCGACACCGATGTCGACGACAGGGAGTTCATTCTCAGTCAAGATTTCTTCTGCACTCCTGATTATATCACACCGGATAATCAACATATGATGAACGGCTGGGATTGCACCAAGCTGGAAAACATCCCTTGCCCCAAATCACCCGAGAAATCGAATACCCTTAAATCGAAGAAGCGAAGACAGTGTCAGAATGATATCTCATTGAATCCTCTCAGCCCTACATTGTCTGGAAATCAGCCGATAGTTGAGCTTGAAGCAGATGTTTTTGGCATGGATGAGGTCATGATGGAGAAACCAACAGCAACAGAACCACGGAAGGTGCAAAATTATGTATCTCAATCTGCTGTGGCTTTACGCTGTCGTGTCATGCCTCCTCCTTGCTTGAAGAATCCGTACATTAAGGATGCTTCAGAAATGGGCATTGATCCTCTTGGCAGCCAAAGATCGAAATGTGCAGCTTTCTTCCCTACTTTTATGGGCGGAAATGGCCTTTCACGTTACTGTGCTGATTTTCACGAGATTGAGCAAATCGGCAGTGGGTACTTCAGTCACGTATTCAAAGTCTTGAACAGAATTGATGGTTGTTTGTATGCCGTGAAACGTAGCATGAAGCAGTTGCATCTGGACACAGAAAGGAGAAAGGCTATGATGGAAGTTCAATCTCTGGCAGCTTTAGGGTCCCATGAAAACATTGTTGGATACTACTCGTCTTGGTTTGAAAATGAGCAGCTCCACATTCAGATGGAATTATGTGATCACAGCTTATCCATAAACAAGTTGTCCCGACCATTCAAAGATGGGGAGATTTTAGAAGCCTTGTATCAGATTGCAAAAGCGTTGCAGTTTATGCATGGGAGAGGAATAGTTCACTTAGATGTAAAACCTGATAATATATATGTGAAGAATGGTATTTATAAGCTTGGTGACTTTGGATGTGCAACTCTACTTGATAAGAGCCTACCGATTGAAGAGGGTGATGCTCGATATACGCCTCAAGAGATCCTGAATGAGAAATATGATGATCTTGACAAGGCTGATATCTTCTCATTGGGAGTCACTATTTACGAGCTGATTAGAGGTTCTCCTTTACCAGAATCAGGGCCTCAAATTTTAAATCTTAGGGAGGGAAAGTTGCCACTTCTTCCTGGTCATTCATTGCAATTTCAGAACTTACTCAAGGTCATGTTGGATCCAAATCCAGTCTGGAGACCGTCAGCGAAAGATTTGGTTGAAAATCCAAATTTTTACAAGGTGCGGCGAAATGGACAAGCCTAG

Protein Analysis

476

Amino Acids

53.28

Weight (kDa)

5.77

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 222 - 464 6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 225 - 462 1.5e-22 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011280)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1068
AasI GACNNNNNNGTC 1 cut(s) 164
AatII GACGTC 1 cut(s) 156
AccB1I GGYRCC 1 cut(s) 146
AccBSI CCGCTC 1 cut(s) 137
AccI GTMKAC 2 cut(s) 156, 168
AciI CCGC 4 cut(s) 111, 135, 633, 1408
AclWI GGATC 4 cut(s) 572, 1147, 1337, 1350
AcsI RAATTY 2 cut(s) 1260, 1393
AcuI CTGAAG 3 cut(s) 8, 546, 682
AcyI GRCGYC 1 cut(s) 153
AfaI GTAC 2 cut(s) 548, 695
AfeI AGCGCT 1 cut(s) 12
AfiI CCNNNNNNNGG 1 cut(s) 1250
AjiI CACGTC 1 cut(s) 63
AjnI CCWGG 1 cut(s) 1297
AjuI GAANNNNNNNTTGG 2 cut(s) 831, 863
AluBI AGCT 9 cut(s) 28, 268, 403, 611, 824, 883, 915, 1072, 1222
AluI AGCT 9 cut(s) 28, 268, 403, 611, 824, 883, 915, 1072, 1222
Alw26I GTCTC 1 cut(s) 1354
AlwI GGATC 4 cut(s) 572, 1147, 1337, 1350
Ama87I CYCGRG 2 cut(s) 105, 296
Aor51HI AGCGCT 1 cut(s) 12
AoxI GGCC 2 cut(s) 640, 1253
ApeKI GCWGC 5 cut(s) 120, 588, 608, 821, 880
ApoI RAATTY 2 cut(s) 1260, 1393
ArsI GACNNNNNNTTYG 2 cut(s) 322, 354
AspLEI GCGC 1 cut(s) 13
AspS9I GGNCC 2 cut(s) 831, 1253
AsuHPI GGTGA 3 cut(s) 285, 1088, 1139
AvaI CYCGRG 2 cut(s) 105, 296
AvaII GGWCC 1 cut(s) 831
BaeI ACNNNNGTAYC 2 cut(s) 685, 718
BamHI GGATCC 1 cut(s) 1342
BanI GGYRCC 1 cut(s) 146
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
BauI CACGAG 1 cut(s) 668
BbsI GAAGAC 1 cut(s) 337
BbvI GCAGC 5 cut(s) 132, 600, 620, 833, 892
BccI CCATC 5 cut(s) 433, 725, 796, 889, 944
BceAI ACGGC 3 cut(s) 133, 265, 731
BcgI CGANNNNNNTGC 2 cut(s) 136, 170
BciT130I CCWGG 1 cut(s) 1299
BciVI GTATCC 1 cut(s) 845
BclI TGATCA 1 cut(s) 907
BcoDI GTCTC 1 cut(s) 1354
BfaI CTAG 2 cut(s) 29, 1426
BfoI RGCGCY 1 cut(s) 14
BfuI GTATCC 1 cut(s) 845
BisI GCNGC 7 cut(s) 111, 121, 589, 609, 822, 881, 1409
BlsI GCNGC 7 cut(s) 112, 122, 590, 610, 823, 882, 1410
Bme1390I CCNGG 1 cut(s) 1299
Bme18I GGWCC 1 cut(s) 831
BmeT110I CYCGRG 2 cut(s) 105, 296
BmgBI CACGTC 1 cut(s) 63
BmgT120I GGNCC 2 cut(s) 831, 1253
BmiI GGNNCC 4 cut(s) 148, 832, 833, 1344
BmrFI CCNGG 1 cut(s) 1299
BmsI GCATC 3 cut(s) 547, 781, 1120
BpiI GAAGAC 1 cut(s) 337
BpmI CTGGAG 1 cut(s) 1378
BpuEI CTTGAG 2 cut(s) 1131, 1313
BsaAI YACGTR 1 cut(s) 706
BsaBI GATNNNNATC 1 cut(s) 1347
BsaHI GRCGYC 1 cut(s) 153
BsaI GGTCTC 1 cut(s) 1354
BsaJI CCNNGG 2 cut(s) 142, 464
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 2 cut(s) 1268, 1298
Bsc4I CCNNNNNNNGG 1 cut(s) 1250
Bse1I ACTGG 1 cut(s) 1352
Bse3DI GCAATG 1 cut(s) 1307
Bse8I GATNNNNATC 1 cut(s) 1347
BseBI CCWGG 1 cut(s) 1299
BseDI CCNNGG 2 cut(s) 142, 464
BseGI GGATG 5 cut(s) 68, 276, 433, 562, 1091
BseJI GATNNNNATC 1 cut(s) 1347
BseLI CCNNNNNNNGG 1 cut(s) 1250
BseMI GCAATG 1 cut(s) 1307
BseMII CTCAG 2 cut(s) 202, 379
BseNI ACTGG 1 cut(s) 1352
BseRI GAGGAG 2 cut(s) 121, 516
BseXI GCAGC 5 cut(s) 132, 600, 620, 833, 892
BseYI CCCAGC 1 cut(s) 252
BsgI GTGCAG 2 cut(s) 190, 627
BshFI GGCC 2 cut(s) 642, 1255
BshNI GGYRCC 1 cut(s) 146
BsiHKCI CYCGRG 2 cut(s) 105, 296
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 2 cut(s) 817, 919
BslI CCNNNNNNNGG 1 cut(s) 1250
BsmAI GTCTC 1 cut(s) 1354
BsmFI GGGAC 2 cut(s) 817, 919
BsnI GGCC 2 cut(s) 642, 1255
Bso31I GGTCTC 1 cut(s) 1354
BsoBI CYCGRG 2 cut(s) 105, 296
Bsp143I GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
BspACI CCGC 4 cut(s) 111, 135, 633, 1408
BspANI GGCC 2 cut(s) 642, 1255
BspCNI CTCAG 2 cut(s) 201, 378
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 4 cut(s) 148, 832, 833, 1344
BspPI GGATC 4 cut(s) 572, 1147, 1337, 1350
BspT107I GGYRCC 1 cut(s) 146
BspTNI GGTCTC 1 cut(s) 1354
BsrBI CCGCTC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 1307
BsrI ACTGG 1 cut(s) 1352
BssECI CCNNGG 2 cut(s) 142, 464
BssMI GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
BssNI GRCGYC 1 cut(s) 153
BssSI CACGAG 1 cut(s) 668
Bst2BI CACGAG 1 cut(s) 668
Bst2UI CCWGG 1 cut(s) 1299
Bst4CI ACNGT 3 cut(s) 336, 656, 1365
Bst6I CTCTTC 1 cut(s) 1116
BstACI GRCGYC 1 cut(s) 153
BstAPI GCANNNNNTGC 1 cut(s) 1000
BstBAI YACGTR 1 cut(s) 706
BstC8I GCNNGC 1 cut(s) 15
BstDEI CTNAG 4 cut(s) 188, 365, 1024, 1271
BstDSI CCRYGG 1 cut(s) 464
BstF5I GGATG 5 cut(s) 68, 276, 433, 562, 1091
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 6 cut(s) 580, 599, 910, 1155, 1177, 1345
BstMAI GTCTC 1 cut(s) 1354
BstMBI GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
BstMWI GCNNNNNNNGC 5 cut(s) 19, 110, 258, 639, 1000
BstNI CCWGG 1 cut(s) 1299
BstSCI CCNGG 1 cut(s) 1297
BstV1I GCAGC 5 cut(s) 132, 600, 620, 833, 892
BstV2I GAAGAC 1 cut(s) 337
BstX2I RGATCY 2 cut(s) 1152, 1342
BstYI RGATCY 2 cut(s) 1152, 1342
BsuI GTATCC 1 cut(s) 845
BsuRI GGCC 2 cut(s) 642, 1255
BtgI CCRYGG 1 cut(s) 464
BtrI CACGTC 1 cut(s) 63
BtsCI GGATG 5 cut(s) 68, 276, 433, 562, 1091
BtsI GCAGTG 1 cut(s) 694
BtsIMutI CAGTG 2 cut(s) 341, 694
Cac8I GCNNGC 1 cut(s) 15
CciI TCATGA 1 cut(s) 435
CfoI GCGC 1 cut(s) 13
Cfr13I GGNCC 2 cut(s) 831, 1253
Csp6I GTAC 2 cut(s) 547, 694
CviAII CATG 7 cut(s) 424, 436, 520, 760, 836, 1004, 1336
CviQI GTAC 2 cut(s) 547, 694
DdeI CTNAG 4 cut(s) 188, 365, 1024, 1271
DpnI GATC 6 cut(s) 579, 598, 909, 1154, 1176, 1344
DpnII GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
DraI TTTAAA 1 cut(s) 1266
DrdI GACNNNNNNGTC 1 cut(s) 164
DseDI GACNNNNNNGTC 1 cut(s) 164
Eam1104I CTCTTC 1 cut(s) 1116
EarI CTCTTC 1 cut(s) 1116
EciI GGCGGA 1 cut(s) 648
Eco31I GGTCTC 1 cut(s) 1354
Eco32I GATATC 2 cut(s) 349, 1192
Eco47I GGWCC 1 cut(s) 831
Eco47III AGCGCT 1 cut(s) 12
Eco57I CTGAAG 3 cut(s) 8, 546, 682
Eco88I CYCGRG 2 cut(s) 105, 296
EcoO109I RGGNCCY 2 cut(s) 831, 1253
EcoRII CCWGG 1 cut(s) 1297
EcoRV GATATC 2 cut(s) 349, 1192
EcoT22I ATGCAT 1 cut(s) 1005
FaeI CATG 7 cut(s) 427, 439, 523, 763, 839, 1007, 1339
FaqI GGGAC 2 cut(s) 817, 919
FatI CATG 7 cut(s) 423, 435, 519, 759, 835, 1003, 1335
FauNDI CATATG 1 cut(s) 240
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 2 cut(s) 156, 168
Fnu4HI GCNGC 7 cut(s) 111, 121, 589, 609, 822, 881, 1409
FokI GGATG 5 cut(s) 55, 263, 440, 569, 1098
Fsp4HI GCNGC 7 cut(s) 111, 121, 589, 609, 822, 881, 1409
FspBI CTAG 2 cut(s) 29, 1426
GlaI GCGC 1 cut(s) 12
GluI GCNGC 7 cut(s) 111, 121, 589, 609, 822, 881, 1409
GsaI CCCAGC 1 cut(s) 256
GsuI CTGGAG 1 cut(s) 1378
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 2 cut(s) 642, 1255
HapII CCGG 1 cut(s) 227
HhaI GCGC 1 cut(s) 13
Hin1I GRCGYC 1 cut(s) 153
Hin1II CATG 7 cut(s) 427, 439, 523, 763, 839, 1007, 1339
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HincII GTYRAC 2 cut(s) 157, 169
HindII GTYRAC 2 cut(s) 157, 169
HindIII AAGCTT 1 cut(s) 1070
HinfI GANTC 4 cut(s) 358, 541, 1206, 1247
HpaII CCGG 1 cut(s) 227
HphI GGTGA 3 cut(s) 285, 1088, 1139
Hpy166II GTNNAC 3 cut(s) 157, 169, 1021
Hpy188I TCNGA 5 cut(s) 342, 565, 894, 978, 1320
Hpy8I GTNNAC 3 cut(s) 157, 169, 1021
Hpy99I CGWCG 5 cut(s) 55, 119, 155, 158, 173
HpyAV CCTTC 2 cut(s) 134, 463
HpyCH4III ACNGT 3 cut(s) 336, 656, 1365
HpyCH4IV ACGT 5 cut(s) 62, 153, 649, 705, 754
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 110, 258, 639, 1000
HpyF3I CTNAG 4 cut(s) 188, 365, 1024, 1271
HpySE526I ACGT 5 cut(s) 62, 153, 649, 705, 754
Hsp92I GRCGYC 1 cut(s) 153
Hsp92II CATG 7 cut(s) 427, 439, 523, 763, 839, 1007, 1339
HspAI GCGC 1 cut(s) 11
KflI GGGWCCC 1 cut(s) 831
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
LmnI GCTCC 3 cut(s) 8, 142, 888
Lsp1109I GCAGC 5 cut(s) 132, 600, 620, 833, 892
LweI GCATC 3 cut(s) 547, 781, 1120
MaeI CTAG 2 cut(s) 29, 1426
MaeII ACGT 5 cut(s) 62, 153, 649, 705, 754
MaeIII GTNAC 4 cut(s) 650, 701, 1076, 1207
MalI GATC 6 cut(s) 579, 598, 909, 1154, 1176, 1344
MbiI CCGCTC 1 cut(s) 137
MboI GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
MboII GAAGA 9 cut(s) 193, 334, 342, 550, 607, 1066, 1133, 1186, 1286
MflI RGATCY 2 cut(s) 1152, 1342
MluCI AATT 6 cut(s) 478, 726, 899, 1260, 1313, 1393
MlyI GAGTC 1 cut(s) 1215
MmeI TCCRAC 3 cut(s) 96, 829, 1320
Mph1103I ATGCAT 1 cut(s) 1005
MseI TTAA 3 cut(s) 315, 552, 1265
MslI CAYNNNNRTG 2 cut(s) 893, 1026
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 1 cut(s) 1299
MvaI CCWGG 1 cut(s) 1299
MwoI GCNNNNNNNGC 5 cut(s) 19, 110, 258, 639, 1000
NdeI CATATG 1 cut(s) 240
NdeII GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
NlaIII CATG 7 cut(s) 427, 439, 523, 763, 839, 1007, 1339
NlaIV GGNNCC 4 cut(s) 148, 832, 833, 1344
NmeAIII GCCGAG 1 cut(s) 123
NmuCI GTSAC 3 cut(s) 701, 1076, 1207
NsiI ATGCAT 1 cut(s) 1005
PagI TCATGA 1 cut(s) 435
PcsI WCGNNNNNNNCGW 3 cut(s) 59, 150, 159
PfeI GAWTC 3 cut(s) 358, 541, 1247
PflFI GACNNNGTC 1 cut(s) 336
PkrI GCNGC 7 cut(s) 112, 122, 590, 610, 823, 882, 1410
PleI GAGTC 1 cut(s) 1214
PpsI GAGTC 1 cut(s) 1214
Ppu21I YACGTR 1 cut(s) 706
PpuMI RGGWCCY 1 cut(s) 831
PsiI TTATAA 1 cut(s) 1068
Psp5II RGGWCCY 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 1297
PspFI CCCAGC 1 cut(s) 252
PspGI CCWGG 1 cut(s) 1297
PspN4I GGNNCC 4 cut(s) 148, 832, 833, 1344
PspPI GGNCC 2 cut(s) 831, 1253
PspPPI RGGWCCY 1 cut(s) 831
PsuI RGATCY 2 cut(s) 1152, 1342
PsyI GACNNNGTC 1 cut(s) 336
RsaI GTAC 2 cut(s) 548, 695
RsaNI GTAC 2 cut(s) 547, 694
RseI CAYNNNNRTG 2 cut(s) 893, 1026
SalI GTCGAC 2 cut(s) 155, 167
SaqAI TTAA 3 cut(s) 315, 552, 1265
SatI GCNGC 7 cut(s) 111, 121, 589, 609, 822, 881, 1409
Sau3AI GATC 6 cut(s) 577, 596, 907, 1152, 1174, 1342
Sau96I GGNCC 2 cut(s) 831, 1253
SchI GAGTC 1 cut(s) 1215
ScrFI CCNGG 1 cut(s) 1299
SfaNI GCATC 3 cut(s) 547, 781, 1120
SinI GGWCC 1 cut(s) 831
SmiMI CAYNNNNRTG 2 cut(s) 893, 1026
SmlI CTYRAG 2 cut(s) 1146, 1328
SmoI CTYRAG 2 cut(s) 1146, 1328
Sse9I AATT 6 cut(s) 478, 726, 899, 1260, 1313, 1393
SsiI CCGC 4 cut(s) 111, 135, 633, 1408
SspMI CTAG 2 cut(s) 29, 1426
StyD4I CCNGG 1 cut(s) 1297
TaaI ACNGT 3 cut(s) 336, 656, 1365
TaiI ACGT 5 cut(s) 65, 156, 652, 708, 757
TaqI TCGA 6 cut(s) 156, 168, 305, 320, 599, 1135
TasI AATT 6 cut(s) 478, 726, 899, 1260, 1313, 1393
TauI GCSGC 2 cut(s) 113, 1411
TfiI GAWTC 3 cut(s) 358, 541, 1247
Tru1I TTAA 3 cut(s) 315, 552, 1265
Tru9I TTAA 3 cut(s) 315, 552, 1265
TscAI CASTG 2 cut(s) 341, 694
TseFI GTSAC 3 cut(s) 701, 1076, 1207
TseI GCWGC 5 cut(s) 120, 588, 608, 821, 880
Tsp45I GTSAC 3 cut(s) 701, 1076, 1207
TspDTI ATGAA 6 cut(s) 17, 172, 260, 776, 852, 1296
TspGWI ACGGA 2 cut(s) 481, 534
TspRI CASTG 2 cut(s) 341, 694
Tth111I GACNNNGTC 1 cut(s) 336
VpaK11BI GGWCC 1 cut(s) 831
XapI RAATTY 2 cut(s) 1260, 1393
XcmI CCANNNNNNNNNTGG 1 cut(s) 1353
XmiI GTMKAC 2 cut(s) 156, 168
XspI CTAG 2 cut(s) 29, 1426
ZraI GACGTC 1 cut(s) 154
Zsp2I ATGCAT 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.