MD11G1303200.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
41876026 .. 41879451
3426 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1303200.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGAGTGCAGGTAGACTCTGTTTGACTCAATCATTTTGTCCCGCGCGATTCGAAATCCCGAAAGTTTCGATTTTTAAATATATCAGCAAGAAGAACACTGACAGAGTCGATTCGAGGGAGACGAAAAAGGGGATGAATCGGAGGGAGATGAAGGGAGCGCTACCGAGGCTTCAGCTAGGGGAAACCCACCATTCGGCGTTTTCCACGTCATCATCGAACCCCTCTCGCTTCCAGAACCTTCTGGAAGCCGGAGCTGCCGACGGCAACCTTCCCTCCTCCGCTCCTCTCGGCATCGACGTTGACCCCAGTTTCGACGACCGGGAGTTCATACTCAGCCAAGACTTCTTCTGCACTCCCGATTATATCACACCGGATAATCAGCCTATGGTGAACGGCTGGGATTGCAGCAAGCTGGAAGATATCCCTTGCCCCAGATCACCGGAGAAGTCGAATACCGTTAAGTCGAAGAGGCGCAGGCAGGATCAGGATGACATCTCATTGAATCCTCTCAGCCCTACGTTGTTCGGAAATGAGCCGGTAGTTGAGCTTGAGAAAGATGTTTTTGGCATGGATGAGGTTGTGATGGAGAAACCAACAGCAACAGAACCACGGAAGAAGCAAAATTATGTATCTCAATCTGCAGTGGCTTTACGCTGTCGTGTTATGCCTCCTCCGTGCTTGAAGAATCCTTATTTGAAGGATGCTTCAGAAATTGGCATTGATCCTTTTGGCAACCAAAGATCGAAGGCTTTCTTCCCTGCATTTATGGGCGGAAATGGCCTTTCGCGTTACTGTGCTGATTTTCATGAGATTGAGCAAATCGGCAGTGGGTACTTCAGTCATGTATTCAAAGTCTTGAACAGAATTGATGGTTGTTTGTATGCAGTGAAACGTAGCATGAAGCAGTTGCATCAGGATACAGAAAGGAGAAAGGCTATGATGGAAGTTCAATCTTTGGCAGCTTTAGGGTCCCATGAAAACATTGTTGGATACTATTCGTCTTGGTTTGAAAATGAGCAGCTGCACATTCAGATGGAGTTATGTGATCACAGCCTATCCATCAACAAATTTTGCCGACCATTCAAAGAGGGGGAGATTTTAGAAGCCTTGTATCAGATTTCAAAAGCGTTGCAGCTTATACACGGGCGAGGAATAGCTCACTTAGATGTAAAACCTGATAATATATATGTGAAGAATGGTGTTTATAAGCTTGGTGACTTTGGATGTGCAACTCTACTTGACAACAGCCTGCCAATTGAAGAGGGTGATGCTCGATATATGCCGCAAGAAATCCTGAATGAGAAATATGATGATCTTGATAAGGCCGATATCTTCTCCTTGGGAGTTGCTGTTTATGAGCTTATTAGAGGTTCACCTTTGCCAGAATCAGGACCTCAAATTTTAAATCTCAGGGAGGGAAAGTTGCCACTCCTTCCTGGTCATTCGTTGCAATTTCAGAACTTACTCAAGTTCATGTTGGATCCAAATCCAGTCTGGAGGCCGTCAGCGAAAGATTTGGTCGAAAATCCAATTTTTGACAAGGTGCGGCGAAATGGACGAGCCTAG

Protein Analysis

522

Amino Acids

58.79

Weight (kDa)

6.3

Isoelectric Point (pI)

51.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 268 - 511 7.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 271 - 508 1.9e-20 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011280)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1206
AccBSI CCGCTC 1 cut(s) 281
AccI GTMKAC 1 cut(s) 13
AccII CGCG 3 cut(s) 44, 46, 787
AciI CCGC 5 cut(s) 42, 279, 771, 1283, 1546
AclWI GGATC 4 cut(s) 489, 716, 1475, 1488
AcsI RAATTY 2 cut(s) 1067, 1398
AcuI CTGAAG 3 cut(s) 155, 690, 820
AfaI GTAC 1 cut(s) 833
AfeI AGCGCT 1 cut(s) 159
AfiI CCNNNNNNNGG 2 cut(s) 193, 1388
AjiI CACGTC 1 cut(s) 207
AjnI CCWGG 1 cut(s) 1435
AjuI GAANNNNNNNTTGG 2 cut(s) 969, 1001
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 4 cut(s) 489, 716, 1475, 1488
Aor51HI AGCGCT 1 cut(s) 159
AoxI GGCC 3 cut(s) 778, 1323, 1499
ApeKI GCWGC 6 cut(s) 254, 405, 959, 1018, 1021, 1132
ApoI RAATTY 2 cut(s) 1067, 1398
ArsI GACNNNNNNTTYG 2 cut(s) 293, 325
Asp700I GAANNNNTTC 1 cut(s) 749
AspLEI GCGC 3 cut(s) 46, 160, 474
AspS9I GGNCC 2 cut(s) 969, 1391
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 5 cut(s) 400, 429, 1226, 1277, 1365
AsuII TTCGAA 1 cut(s) 51
AvaII GGWCC 2 cut(s) 969, 1391
BaeI ACNNNNGTAYC 2 cut(s) 823, 856
BamHI GGATCC 1 cut(s) 1480
BbvI GCAGC 6 cut(s) 241, 417, 971, 1008, 1030, 1144
BccI CCATC 5 cut(s) 577, 863, 934, 1027, 1067
BceAI ACGGC 3 cut(s) 277, 409, 1486
BciT130I CCWGG 1 cut(s) 1437
BciVI GTATCC 2 cut(s) 910, 983
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 2 cut(s) 176, 1564
BfmI CTRYAG 1 cut(s) 639
BfoI RGCGCY 1 cut(s) 161
BfuI GTATCC 2 cut(s) 910, 983
BisI GCNGC 8 cut(s) 255, 406, 960, 1019, 1022, 1133, 1283, 1547
BlsI GCNGC 8 cut(s) 256, 407, 961, 1020, 1023, 1134, 1284, 1548
Bme1390I CCNGG 2 cut(s) 320, 1437
Bme18I GGWCC 2 cut(s) 969, 1391
BmgBI CACGTC 1 cut(s) 207
BmgT120I GGNCC 2 cut(s) 969, 1391
BmiI GGNNCC 3 cut(s) 970, 971, 1482
BmrFI CCNGG 2 cut(s) 320, 1437
BmrI ACTGGG 1 cut(s) 300
BmsI GCATC 4 cut(s) 300, 691, 919, 1258
BmuI ACTGGG 1 cut(s) 300
BpmI CTGGAG 1 cut(s) 1516
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 2 cut(s) 569, 1451
BpuMI CCSGG 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 1485
BsaJI CCNNGG 3 cut(s) 164, 608, 1338
BsaWI WCCGGW 2 cut(s) 370, 439
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 1335, 1365, 1406, 1436
Bsc4I CCNNNNNNNGG 2 cut(s) 193, 1388
Bse118I RCCGGY 1 cut(s) 535
Bse1I ACTGG 2 cut(s) 306, 1490
Bse8I GATNNNNATC 1 cut(s) 1485
BseBI CCWGG 1 cut(s) 1437
BseDI CCNNGG 3 cut(s) 164, 608, 1338
BseGI GGATG 5 cut(s) 138, 493, 577, 706, 1229
BseJI GATNNNNATC 1 cut(s) 1485
BseLI CCNNNNNNNGG 2 cut(s) 193, 1388
BseMII CTCAG 3 cut(s) 346, 523, 1423
BseNI ACTGG 2 cut(s) 306, 1490
BseRI GAGGAG 3 cut(s) 265, 273, 660
BseXI GCAGC 6 cut(s) 241, 417, 971, 1008, 1030, 1144
BseYI CCCAGC 1 cut(s) 396
BsgI GTGCAG 3 cut(s) 27, 334, 1007
Bsh1236I CGCG 3 cut(s) 44, 46, 787
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 3 cut(s) 780, 1325, 1501
BsiEI CGRYCG 1 cut(s) 319
BsiSI CCGG 5 cut(s) 249, 319, 371, 440, 536
BslFI GGGAC 2 cut(s) 24, 955
BslI CCNNNNNNNGG 2 cut(s) 193, 1388
BsmAI GTCTC 1 cut(s) 113
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 2 cut(s) 24, 955
BsnI GGCC 3 cut(s) 780, 1325, 1501
Bsp119I TTCGAA 1 cut(s) 51
Bsp143I GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
BspACI CCGC 5 cut(s) 42, 279, 771, 1283, 1546
BspANI GGCC 3 cut(s) 780, 1325, 1501
BspCNI CTCAG 3 cut(s) 345, 522, 1422
BspFNI CGCG 3 cut(s) 44, 46, 787
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 3 cut(s) 970, 971, 1482
BspMAI CTGCAG 1 cut(s) 643
BspPI GGATC 4 cut(s) 489, 716, 1475, 1488
BspT104I TTCGAA 1 cut(s) 51
BsrBI CCGCTC 1 cut(s) 281
BsrFI RCCGGY 1 cut(s) 535
BsrI ACTGG 2 cut(s) 306, 1490
BssAI RCCGGY 1 cut(s) 535
BssECI CCNNGG 3 cut(s) 164, 608, 1338
BssMI GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
BssT1I CCWWGG 1 cut(s) 1338
Bst2UI CCWGG 1 cut(s) 1437
Bst4CI ACNGT 2 cut(s) 457, 794
Bst6I CTCTTC 2 cut(s) 461, 1254
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 3 cut(s) 410, 476, 1250
BstDEI CTNAG 4 cut(s) 332, 509, 1162, 1409
BstDSI CCRYGG 1 cut(s) 608
BstF5I GGATG 5 cut(s) 138, 493, 577, 706, 1229
BstFNI CGCG 3 cut(s) 44, 46, 787
BstH2I RGCGCY 1 cut(s) 161
BstHHI GCGC 3 cut(s) 46, 160, 474
BstKTI GATC 7 cut(s) 437, 484, 724, 743, 1048, 1315, 1483
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 4 cut(s) 166, 254, 402, 777
BstNI CCWGG 1 cut(s) 1437
BstSCI CCNGG 2 cut(s) 318, 1435
BstSFI CTRYAG 1 cut(s) 639
BstUI CGCG 3 cut(s) 44, 46, 787
BstV1I GCAGC 6 cut(s) 241, 417, 971, 1008, 1030, 1144
BstX2I RGATCY 1 cut(s) 1480
BstYI RGATCY 1 cut(s) 1480
BsuI GTATCC 2 cut(s) 910, 983
BsuRI GGCC 3 cut(s) 780, 1325, 1501
BtgI CCRYGG 1 cut(s) 608
BtrI CACGTC 1 cut(s) 207
BtsCI GGATG 5 cut(s) 138, 493, 577, 706, 1229
BtsI GCAGTG 3 cut(s) 648, 832, 891
BtsIMutI CAGTG 4 cut(s) 96, 648, 832, 891
Cac8I GCNNGC 3 cut(s) 410, 476, 1250
CciI TCATGA 1 cut(s) 805
CfoI GCGC 3 cut(s) 46, 160, 474
Cfr10I RCCGGY 1 cut(s) 535
Cfr13I GGNCC 2 cut(s) 969, 1391
Csp6I GTAC 1 cut(s) 832
CviAII CATG 6 cut(s) 568, 806, 842, 898, 974, 1474
CviQI GTAC 1 cut(s) 832
DdeI CTNAG 4 cut(s) 332, 509, 1162, 1409
DpnI GATC 7 cut(s) 436, 483, 723, 742, 1047, 1314, 1482
DpnII GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
DraI TTTAAA 2 cut(s) 76, 1404
Eam1104I CTCTTC 2 cut(s) 461, 1254
EarI CTCTTC 2 cut(s) 461, 1254
EciI GGCGGA 1 cut(s) 786
Eco130I CCWWGG 1 cut(s) 1338
Eco32I GATATC 2 cut(s) 421, 1330
Eco47I GGWCC 2 cut(s) 969, 1391
Eco47III AGCGCT 1 cut(s) 159
Eco57I CTGAAG 3 cut(s) 155, 690, 820
EcoO109I RGGNCCY 2 cut(s) 969, 1391
EcoRII CCWGG 1 cut(s) 1435
EcoRV GATATC 2 cut(s) 421, 1330
EcoT14I CCWWGG 1 cut(s) 1338
ErhI CCWWGG 1 cut(s) 1338
Esp3I CGTCTC 1 cut(s) 113
FaeI CATG 6 cut(s) 571, 809, 845, 901, 977, 1477
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 2 cut(s) 24, 955
FatI CATG 6 cut(s) 567, 805, 841, 897, 973, 1473
FauI CCCGC 1 cut(s) 49
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 1 cut(s) 13
Fnu4HI GCNGC 8 cut(s) 255, 406, 960, 1019, 1022, 1133, 1283, 1547
FokI GGATG 5 cut(s) 145, 500, 584, 713, 1236
Fsp4HI GCNGC 8 cut(s) 255, 406, 960, 1019, 1022, 1133, 1283, 1547
FspBI CTAG 2 cut(s) 176, 1564
GlaI GCGC 3 cut(s) 45, 159, 473
GluI GCNGC 8 cut(s) 255, 406, 960, 1019, 1022, 1133, 1283, 1547
GsaI CCCAGC 1 cut(s) 400
GsuI CTGGAG 1 cut(s) 1516
HaeII RGCGCY 1 cut(s) 161
HaeIII GGCC 3 cut(s) 780, 1325, 1501
HapII CCGG 5 cut(s) 249, 319, 371, 440, 536
HhaI GCGC 3 cut(s) 46, 160, 474
Hin1II CATG 6 cut(s) 571, 809, 845, 901, 977, 1477
Hin6I GCGC 3 cut(s) 44, 158, 472
HinP1I GCGC 3 cut(s) 44, 158, 472
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 1 cut(s) 1208
HinfI GANTC 9 cut(s) 15, 25, 48, 105, 110, 136, 502, 685, 1385
HpaII CCGG 5 cut(s) 249, 319, 371, 440, 536
HphI GGTGA 5 cut(s) 400, 429, 1226, 1277, 1365
Hpy166II GTNNAC 4 cut(s) 14, 301, 391, 1373
Hpy188I TCNGA 6 cut(s) 141, 527, 709, 1032, 1116, 1458
Hpy8I GTNNAC 4 cut(s) 14, 301, 391, 1373
Hpy99I CGWCG 3 cut(s) 263, 299, 317
HpyAV CCTTC 6 cut(s) 145, 248, 278, 691, 739, 1442
HpyCH4III ACNGT 2 cut(s) 457, 794
HpyCH4IV ACGT 4 cut(s) 206, 297, 518, 892
HpyF10VI GCNNNNNNNGC 4 cut(s) 166, 254, 402, 777
HpyF3I CTNAG 4 cut(s) 332, 509, 1162, 1409
HpySE526I ACGT 4 cut(s) 206, 297, 518, 892
Hsp92II CATG 6 cut(s) 571, 809, 845, 901, 977, 1477
HspAI GCGC 3 cut(s) 44, 158, 472
KflI GGGWCCC 1 cut(s) 969
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
LmnI GCTCC 3 cut(s) 155, 251, 286
Lsp1109I GCAGC 6 cut(s) 241, 417, 971, 1008, 1030, 1144
LweI GCATC 4 cut(s) 300, 691, 919, 1258
MaeI CTAG 2 cut(s) 176, 1564
MaeII ACGT 4 cut(s) 206, 297, 518, 892
MaeIII GTNAC 2 cut(s) 788, 1214
MalI GATC 7 cut(s) 436, 483, 723, 742, 1047, 1314, 1482
MbiI CCGCTC 1 cut(s) 281
MboI GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
MfeI CAATTG 1 cut(s) 1254
MflI RGATCY 1 cut(s) 1480
MluCI AATT 8 cut(s) 622, 711, 864, 1067, 1254, 1398, 1451, 1530
MlyI GAGTC 3 cut(s) 9, 19, 114
MmeI TCCRAC 2 cut(s) 967, 1458
MroXI GAANNNNTTC 1 cut(s) 749
MseI TTAA 3 cut(s) 75, 459, 1403
MslI CAYNNNNRTG 2 cut(s) 1031, 1164
MspA1I CMGCKG 1 cut(s) 1021
MspI CCGG 5 cut(s) 249, 319, 371, 440, 536
MspR9I CCNGG 2 cut(s) 320, 1437
MunI CAATTG 1 cut(s) 1254
MvaI CCWGG 1 cut(s) 1437
MvnI CGCG 3 cut(s) 44, 46, 787
MwoI GCNNNNNNNGC 4 cut(s) 166, 254, 402, 777
NciI CCSGG 1 cut(s) 320
NdeII GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
NlaIII CATG 6 cut(s) 571, 809, 845, 901, 977, 1477
NlaIV GGNNCC 3 cut(s) 970, 971, 1482
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 1 cut(s) 1214
NspV TTCGAA 1 cut(s) 51
PagI TCATGA 1 cut(s) 805
PcsI WCGNNNNNNNCGW 3 cut(s) 119, 212, 294
PdmI GAANNNNTTC 1 cut(s) 749
PfeI GAWTC 6 cut(s) 48, 110, 136, 502, 685, 1385
PflFI GACNNNGTC 1 cut(s) 104
PkrI GCNGC 8 cut(s) 256, 407, 961, 1020, 1023, 1134, 1284, 1548
PleI GAGTC 3 cut(s) 9, 19, 113
PpsI GAGTC 3 cut(s) 9, 19, 113
PpuMI RGGWCCY 2 cut(s) 969, 1391
PsiI TTATAA 1 cut(s) 1206
Psp5II RGGWCCY 2 cut(s) 969, 1391
Psp6I CCWGG 1 cut(s) 1435
PspFI CCCAGC 1 cut(s) 396
PspGI CCWGG 1 cut(s) 1435
PspN4I GGNNCC 3 cut(s) 970, 971, 1482
PspPI GGNCC 2 cut(s) 969, 1391
PspPPI RGGWCCY 2 cut(s) 969, 1391
PstI CTGCAG 1 cut(s) 643
PsuI RGATCY 1 cut(s) 1480
PsyI GACNNNGTC 1 cut(s) 104
PvuII CAGCTG 1 cut(s) 1021
RsaI GTAC 1 cut(s) 833
RsaNI GTAC 1 cut(s) 832
RseI CAYNNNNRTG 2 cut(s) 1031, 1164
SaqAI TTAA 3 cut(s) 75, 459, 1403
SatI GCNGC 8 cut(s) 255, 406, 960, 1019, 1022, 1133, 1283, 1547
Sau3AI GATC 7 cut(s) 434, 481, 721, 740, 1045, 1312, 1480
Sau96I GGNCC 2 cut(s) 969, 1391
SchI GAGTC 3 cut(s) 9, 19, 114
ScrFI CCNGG 2 cut(s) 320, 1437
SfaNI GCATC 4 cut(s) 300, 691, 919, 1258
SfcI CTRYAG 1 cut(s) 639
SfuI TTCGAA 1 cut(s) 51
SinI GGWCC 2 cut(s) 969, 1391
SmiMI CAYNNNNRTG 2 cut(s) 1031, 1164
SmlI CTYRAG 2 cut(s) 548, 1466
SmoI CTYRAG 2 cut(s) 548, 1466
Sse9I AATT 8 cut(s) 622, 711, 864, 1067, 1254, 1398, 1451, 1530
SsiI CCGC 5 cut(s) 42, 279, 771, 1283, 1546
SspMI CTAG 2 cut(s) 176, 1564
StyD4I CCNGG 2 cut(s) 318, 1435
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 2 cut(s) 457, 794
TaiI ACGT 4 cut(s) 209, 300, 521, 895
TasI AATT 8 cut(s) 622, 711, 864, 1067, 1254, 1398, 1451, 1530
TauI GCSGC 2 cut(s) 1285, 1549
TfiI GAWTC 6 cut(s) 48, 110, 136, 502, 685, 1385
Tru1I TTAA 3 cut(s) 75, 459, 1403
Tru9I TTAA 3 cut(s) 75, 459, 1403
TscAI CASTG 4 cut(s) 103, 648, 832, 891
TseFI GTSAC 1 cut(s) 1214
TseI GCWGC 6 cut(s) 254, 405, 959, 1018, 1021, 1132
Tsp45I GTSAC 1 cut(s) 1214
TspDTI ATGAA 7 cut(s) 149, 164, 316, 794, 914, 990, 1462
TspGWI ACGGA 2 cut(s) 625, 663
TspRI CASTG 4 cut(s) 103, 648, 832, 891
Tth111I GACNNNGTC 1 cut(s) 104
VpaK11BI GGWCC 2 cut(s) 969, 1391
XapI RAATTY 2 cut(s) 1067, 1398
XcmI CCANNNNNNNNNTGG 1 cut(s) 1491
XmiI GTMKAC 1 cut(s) 13
XmnI GAANNNNTTC 1 cut(s) 749
XspI CTAG 2 cut(s) 176, 1564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.