RLG00000011963
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
14117173 .. 14120752
3580 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011963

Sequence Viewer

Length: 1416 bp
ATGAGCGCCATGAAGGGACCACTAGAAAGGCTTCACCTAAGTGAAAGCCACCACCAATCACAGTTCGCCAATTCCGACCCAGCTCGATTCCAGAGCCTTCTGGACTCCGTAGCCTCCGACCCCAGTCTTCCTTCTTCCTCGTCTCTCGGTGCTGACCTCGATCCCAATTTGGATGACAAGGATGGCATTCTCAGCCAGGACTTCTTCTGCACTCCAGATTATATCACCCCTGAAAATCAGAATACGTTTGATGGGCTTGATTGCAGTAAGGAAAACATCCCTTGCCCCAAATCTCCGGAGAAAACTATGGTTAAATCCAAGAGGCGTCGACAGGGGCATTATGTTATCTCATCGGATCCTGTTCTTAGCCCCACTTTGTTTGGGAATCAGGAGCTGGGGAAAGATGCAATTGGAATAGATGATATTGAGATAGAGAACGCAACTGTAAGTGAAGTGCGGAAGACAACAAATTATGTATCCCAATCTGCAGTTGCTTTGCGCTGTCGGGTTATGCCTCCTCCATGCTTTAAGAATCCTTATTTAAAGGATGCTTCACAAATGGAGATTGATCCTTTTGGCAATCAAAGATCGAAATGTGCAGCTTTCTTACCTGCAATGAAGGATGGAAATGGCCTTTCACGTTATCGTGCTGATTTTCATGAGATTGAGCAAATTGGGAGAGGGAACTTCAGTCATGTATTTAAAGTCTTGAACCGAATTGATGGTTGCTTGTATGCTGTGAAACAAAGCATTAGGCAGTTGCATCAGGATACAGAAAGGAGAAAAGCTTTAATGGAAGTTCAATGCTTAGCAGCTCTAGGATCCCATGCAAATATTGTTGGGTACTACACTTCTTGGTTTGAAAACGAGAAGCTCTACATTCAGATGGAGCTATGTGATCACAGCTTATGTGTAAACAGTTTTTCCAGACGTTTCACAGAGGGGGAGATTTTGGTAGCCTTGTATCAGATTGCAAAGGCATTGCAGTTTATGCATGAGAGAGGAATAGCTCACTTAGATGTAAAGCCAGATAATATATATGTGAAGAATGGTATTTATAAGCTTGGTGACTTTGGATGTGCAACTCTTCTTGATAAAAGCCTACCAATTGAAGAGGGTGATGCTCGCTATATGCCTTCAGAGATCCTGAATGAGAAACATGACGATCTTGACAAGGCTGATATCTTCTCATTGGGAGTTGCTATGTATGAGCTTATTAGAGGTTCACCGTTACCGGAAGGACCTCAAACCTTAAATCTTAAGAAAGGAAAATTGCCACTGCTTCCTGGTCACTCCTTGCAACTTCAGAACTTGCTCAAGGCCATGTTGGATCCAAATCCAGTCTGCAGACCATCAGCTAAAGAGTTGGTTGAAAATCTAATGTTCCACAGGGTGCTTAAAAATGCGTGGGCCTAG

Protein Analysis

472

Amino Acids

52.78

Weight (kDa)

5.99

Isoelectric Point (pI)

51.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 219 - 459 6.9e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 222 - 460 5.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011280)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1059
Acc36I ACCTGC 1 cut(s) 619
AccI GTMKAC 1 cut(s) 328
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 1 cut(s) 457
AclWI GGATC 9 cut(s) 155, 350, 363, 563, 816, 829, 1138, 1325, 1338
AcuI CTGAAG 3 cut(s) 673, 1122, 1289
AcyI GRCGYC 1 cut(s) 325
AdeI CACNNNGTG 1 cut(s) 1393
AfaI GTAC 1 cut(s) 845
AflII CTTAAG 1 cut(s) 1259
AgsI TTSAA 5 cut(s) 712, 803, 863, 1112, 1373
AjnI CCWGG 2 cut(s) 195, 1285
AleI CACNNNNGTG 1 cut(s) 39
Alw26I GTCTC 1 cut(s) 147
AlwI GGATC 9 cut(s) 155, 350, 363, 563, 816, 829, 1138, 1325, 1338
AlwNI CAGNNNCTG 1 cut(s) 394
Aor13HI TCCGGA 1 cut(s) 295
AoxI GGCC 3 cut(s) 631, 1320, 1410
ApeKI GCWGC 2 cut(s) 599, 812
Asp700I GAANNNNTTC 1 cut(s) 30
AspLEI GCGC 2 cut(s) 8, 501
AspS9I GGNCC 3 cut(s) 17, 1241, 1410
AsuHPI GGTGA 5 cut(s) 26, 217, 1079, 1130, 1218
AvaII GGWCC 2 cut(s) 17, 1241
BamHI GGATCC 3 cut(s) 355, 821, 1330
BbsI GAAGAC 2 cut(s) 119, 467
BbvI GCAGC 2 cut(s) 611, 824
BccI CCATC 6 cut(s) 176, 245, 617, 716, 880, 1360
BciT130I CCWGG 2 cut(s) 197, 1287
BciVI GTATCC 2 cut(s) 487, 763
BclI TGATCA 1 cut(s) 898
BcoDI GTCTC 1 cut(s) 147
BfaI CTAG 3 cut(s) 23, 818, 1414
BfmI CTRYAG 2 cut(s) 486, 1345
BfoI RGCGCY 1 cut(s) 9
BfrI CTTAAG 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 619
BfuI GTATCC 2 cut(s) 487, 763
BisI GCNGC 2 cut(s) 600, 813
BlpI GCTNAGC 1 cut(s) 808
BlsI GCNGC 2 cut(s) 601, 814
Bme1390I CCNGG 2 cut(s) 197, 1287
Bme18I GGWCC 2 cut(s) 17, 1241
BmgT120I GGNCC 3 cut(s) 17, 1241, 1410
BmiI GGNNCC 4 cut(s) 18, 357, 823, 1332
BmrFI CCNGG 2 cut(s) 197, 1287
BmrI ACTGGG 1 cut(s) 117
BmsI GCATC 4 cut(s) 394, 538, 772, 1111
BmuI ACTGGG 1 cut(s) 117
BoxI GACNNNNGTC 1 cut(s) 123
BpiI GAAGAC 2 cut(s) 119, 467
BpmI CTGGAG 1 cut(s) 198
Bpu1102I GCTNAGC 1 cut(s) 808
BpuEI CTTGAG 1 cut(s) 1301
BsaBI GATNNNNATC 1 cut(s) 1335
BsaHI GRCGYC 1 cut(s) 325
BsaWI WCCGGW 2 cut(s) 295, 1234
Bse1I ACTGG 2 cut(s) 123, 1340
Bse3DI GCAATG 2 cut(s) 621, 980
Bse8I GATNNNNATC 1 cut(s) 1335
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 2 cut(s) 197, 1287
BseGI GGATG 6 cut(s) 178, 187, 276, 553, 628, 1082
BseJI GATNNNNATC 1 cut(s) 1335
BseMI GCAATG 2 cut(s) 621, 980
BseMII CTCAG 1 cut(s) 205
BseNI ACTGG 2 cut(s) 123, 1340
BseRI GAGGAG 1 cut(s) 507
BseXI GCAGC 2 cut(s) 611, 824
BseYI CCCAGC 2 cut(s) 79, 394
BsgI GTGCAG 2 cut(s) 193, 618
BshFI GGCC 3 cut(s) 633, 1322, 1412
BsiSI CCGG 2 cut(s) 296, 1235
BslFI GGGAC 1 cut(s) 30
BsmAI GTCTC 1 cut(s) 147
BsmBI CGTCTC 1 cut(s) 147
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 3 cut(s) 633, 1322, 1412
Bsp13I TCCGGA 1 cut(s) 295
Bsp143I GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
Bsp1720I GCTNAGC 1 cut(s) 808
BspACI CCGC 1 cut(s) 457
BspANI GGCC 3 cut(s) 633, 1322, 1412
BspCNI CTCAG 1 cut(s) 204
BspEI TCCGGA 1 cut(s) 295
BspHI TCATGA 1 cut(s) 658
BspLI GGNNCC 4 cut(s) 18, 357, 823, 1332
BspMAI CTGCAG 2 cut(s) 490, 1349
BspMI ACCTGC 1 cut(s) 619
BspPI GGATC 9 cut(s) 155, 350, 363, 563, 816, 829, 1138, 1325, 1338
BspTI CTTAAG 1 cut(s) 1259
BsrDI GCAATG 2 cut(s) 621, 980
BsrI ACTGG 2 cut(s) 123, 1340
BssMI GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
BssNI GRCGYC 1 cut(s) 325
Bst2UI CCWGG 2 cut(s) 197, 1287
Bst4CI ACNGT 4 cut(s) 63, 445, 920, 1230
Bst6I CTCTTC 2 cut(s) 1092, 1107
BstACI GRCGYC 1 cut(s) 325
BstAFI CTTAAG 1 cut(s) 1259
BstAPI GCANNNNNTGC 1 cut(s) 991
BstC8I GCNNGC 1 cut(s) 1126
BstDEI CTNAG 5 cut(s) 38, 191, 365, 808, 1015
BstF5I GGATG 6 cut(s) 178, 187, 276, 553, 628, 1082
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 2 cut(s) 8, 501
BstKTI GATC 9 cut(s) 163, 358, 571, 590, 824, 901, 1146, 1168, 1333
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
BstMWI GCNNNNNNNGC 2 cut(s) 192, 991
BstNI CCWGG 2 cut(s) 197, 1287
BstPAI GACNNNNGTC 1 cut(s) 123
BstSCI CCNGG 2 cut(s) 195, 1285
BstSFI CTRYAG 2 cut(s) 486, 1345
BstV1I GCAGC 2 cut(s) 611, 824
BstV2I GAAGAC 2 cut(s) 119, 467
BstX2I RGATCY 4 cut(s) 355, 821, 1143, 1330
BstYI RGATCY 4 cut(s) 355, 821, 1143, 1330
BsuI GTATCC 2 cut(s) 487, 763
BsuRI GGCC 3 cut(s) 633, 1322, 1412
BtsCI GGATG 6 cut(s) 178, 187, 276, 553, 628, 1082
BtsI GCAGTG 1 cut(s) 1277
BtsIMutI CAGTG 1 cut(s) 1277
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 1 cut(s) 1126
CaiI CAGNNNCTG 1 cut(s) 394
CciI TCATGA 1 cut(s) 658
CfoI GCGC 2 cut(s) 8, 501
Cfr13I GGNCC 3 cut(s) 17, 1241, 1410
CseI GACGC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 844
CspCI CAANNNNNGTGG 2 cut(s) 361, 396
CviAII CATG 8 cut(s) 10, 522, 659, 695, 827, 995, 1160, 1324
CviQI GTAC 1 cut(s) 844
DdeI CTNAG 5 cut(s) 38, 191, 365, 808, 1015
DpnI GATC 9 cut(s) 162, 357, 570, 589, 823, 900, 1145, 1167, 1332
DpnII GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
DraI TTTAAA 2 cut(s) 543, 703
DraIII CACNNNGTG 1 cut(s) 1393
Eam1104I CTCTTC 2 cut(s) 1092, 1107
EarI CTCTTC 2 cut(s) 1092, 1107
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 2 cut(s) 17, 1241
Eco57I CTGAAG 3 cut(s) 673, 1122, 1289
EcoO109I RGGNCCY 1 cut(s) 1241
EcoRII CCWGG 2 cut(s) 195, 1285
EcoRV GATATC 1 cut(s) 1183
EcoT22I ATGCAT 1 cut(s) 996
Esp3I CGTCTC 1 cut(s) 147
FaeI CATG 8 cut(s) 13, 525, 662, 698, 830, 998, 1163, 1327
FaqI GGGAC 1 cut(s) 30
FatI CATG 8 cut(s) 9, 521, 658, 694, 826, 994, 1159, 1323
FbaI TGATCA 1 cut(s) 898
FblI GTMKAC 1 cut(s) 328
Fnu4HI GCNGC 2 cut(s) 600, 813
FokI GGATG 6 cut(s) 185, 194, 263, 560, 635, 1089
Fsp4HI GCNGC 2 cut(s) 600, 813
FspBI CTAG 3 cut(s) 23, 818, 1414
GlaI GCGC 2 cut(s) 7, 500
GluI GCNGC 2 cut(s) 600, 813
GsaI CCCAGC 2 cut(s) 83, 398
GsuI CTGGAG 1 cut(s) 198
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 3 cut(s) 633, 1322, 1412
HapII CCGG 2 cut(s) 296, 1235
HgaI GACGC 1 cut(s) 314
HhaI GCGC 2 cut(s) 8, 501
Hin1I GRCGYC 1 cut(s) 325
Hin1II CATG 8 cut(s) 13, 525, 662, 698, 830, 998, 1163, 1327
Hin6I GCGC 2 cut(s) 6, 499
HinP1I GCGC 2 cut(s) 6, 499
HincII GTYRAC 1 cut(s) 329
HindII GTYRAC 1 cut(s) 329
HindIII AAGCTT 2 cut(s) 786, 1061
HinfI GANTC 4 cut(s) 87, 104, 385, 532
HpaII CCGG 2 cut(s) 296, 1235
HphI GGTGA 5 cut(s) 26, 217, 1079, 1130, 1218
Hpy166II GTNNAC 3 cut(s) 329, 916, 1226
Hpy188I TCNGA 8 cut(s) 76, 118, 240, 355, 885, 969, 1141, 1308
Hpy8I GTNNAC 3 cut(s) 329, 916, 1226
Hpy99I CGWCG 1 cut(s) 330
HpyAV CCTTC 6 cut(s) 7, 107, 141, 613, 1146, 1232
HpyCH4III ACNGT 4 cut(s) 63, 445, 920, 1230
HpyCH4IV ACGT 3 cut(s) 245, 640, 931
HpyF10VI GCNNNNNNNGC 2 cut(s) 192, 991
HpyF3I CTNAG 5 cut(s) 38, 191, 365, 808, 1015
HpySE526I ACGT 3 cut(s) 245, 640, 931
Hsp92I GRCGYC 1 cut(s) 325
Hsp92II CATG 8 cut(s) 13, 525, 662, 698, 830, 998, 1163, 1327
HspAI GCGC 2 cut(s) 6, 499
Kpn2I TCCGGA 1 cut(s) 295
Ksp22I TGATCA 1 cut(s) 898
Kzo9I GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
LmnI GCTCC 2 cut(s) 391, 889
Lsp1109I GCAGC 2 cut(s) 611, 824
LweI GCATC 4 cut(s) 394, 538, 772, 1111
MaeI CTAG 3 cut(s) 23, 818, 1414
MaeII ACGT 3 cut(s) 245, 640, 931
MaeIII GTNAC 3 cut(s) 1067, 1230, 1289
MalI GATC 9 cut(s) 162, 357, 570, 589, 823, 900, 1145, 1167, 1332
MboI GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
MboII GAAGA 8 cut(s) 119, 126, 196, 472, 1057, 1079, 1124, 1177
MfeI CAATTG 2 cut(s) 408, 1107
MflI RGATCY 4 cut(s) 355, 821, 1143, 1330
MluCI AATT 8 cut(s) 70, 166, 408, 469, 672, 717, 1107, 1271
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 3 cut(s) 99, 141, 1308
Mph1103I ATGCAT 1 cut(s) 996
MroI TCCGGA 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 30
MseI TTAA 8 cut(s) 312, 528, 542, 702, 791, 1253, 1260, 1398
MslI CAYNNNNRTG 3 cut(s) 39, 884, 1017
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 2 cut(s) 296, 1235
MspR9I CCNGG 2 cut(s) 197, 1287
MunI CAATTG 2 cut(s) 408, 1107
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 2 cut(s) 197, 1287
MwoI GCNNNNNNNGC 2 cut(s) 192, 991
NdeII GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
NlaIII CATG 8 cut(s) 13, 525, 662, 698, 830, 998, 1163, 1327
NlaIV GGNNCC 4 cut(s) 18, 357, 823, 1332
NmuCI GTSAC 2 cut(s) 1067, 1289
NsiI ATGCAT 1 cut(s) 996
OliI CACNNNNGTG 1 cut(s) 39
PagI TCATGA 1 cut(s) 658
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 1 cut(s) 186
PdmI GAANNNNTTC 1 cut(s) 30
PfeI GAWTC 3 cut(s) 87, 385, 532
PkrI GCNGC 2 cut(s) 601, 814
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PpuMI RGGWCCY 1 cut(s) 1241
PshAI GACNNNNGTC 1 cut(s) 123
PsiI TTATAA 1 cut(s) 1059
Psp5II RGGWCCY 1 cut(s) 1241
Psp6I CCWGG 2 cut(s) 195, 1285
PspFI CCCAGC 2 cut(s) 79, 394
PspGI CCWGG 2 cut(s) 195, 1285
PspN4I GGNNCC 4 cut(s) 18, 357, 823, 1332
PspPI GGNCC 3 cut(s) 17, 1241, 1410
PspPPI RGGWCCY 1 cut(s) 1241
PstI CTGCAG 2 cut(s) 490, 1349
PstNI CAGNNNCTG 1 cut(s) 394
PsuI RGATCY 4 cut(s) 355, 821, 1143, 1330
RsaI GTAC 1 cut(s) 845
RsaNI GTAC 1 cut(s) 844
RseI CAYNNNNRTG 3 cut(s) 39, 884, 1017
SalI GTCGAC 1 cut(s) 327
SaqAI TTAA 8 cut(s) 312, 528, 542, 702, 791, 1253, 1260, 1398
SatI GCNGC 2 cut(s) 600, 813
Sau3AI GATC 9 cut(s) 160, 355, 568, 587, 821, 898, 1143, 1165, 1330
Sau96I GGNCC 3 cut(s) 17, 1241, 1410
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 2 cut(s) 197, 1287
SfaNI GCATC 4 cut(s) 394, 538, 772, 1111
SfcI CTRYAG 2 cut(s) 486, 1345
SinI GGWCC 2 cut(s) 17, 1241
SmiMI CAYNNNNRTG 3 cut(s) 39, 884, 1017
SmlI CTYRAG 2 cut(s) 1259, 1316
SmoI CTYRAG 2 cut(s) 1259, 1316
Sse9I AATT 8 cut(s) 70, 166, 408, 469, 672, 717, 1107, 1271
SsiI CCGC 1 cut(s) 457
SspI AATATT 1 cut(s) 835
SspMI CTAG 3 cut(s) 23, 818, 1414
StyD4I CCNGG 2 cut(s) 195, 1285
TaaI ACNGT 4 cut(s) 63, 445, 920, 1230
TaiI ACGT 3 cut(s) 248, 643, 934
TaqI TCGA 4 cut(s) 85, 159, 328, 590
TasI AATT 8 cut(s) 70, 166, 408, 469, 672, 717, 1107, 1271
TfiI GAWTC 3 cut(s) 87, 385, 532
Tru1I TTAA 8 cut(s) 312, 528, 542, 702, 791, 1253, 1260, 1398
Tru9I TTAA 8 cut(s) 312, 528, 542, 702, 791, 1253, 1260, 1398
TscAI CASTG 1 cut(s) 1284
TseFI GTSAC 2 cut(s) 1067, 1289
TseI GCWGC 2 cut(s) 599, 812
Tsp45I GTSAC 2 cut(s) 1067, 1289
TspDTI ATGAA 3 cut(s) 26, 632, 647
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 1 cut(s) 1284
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 2 cut(s) 17, 1241
XmiI GTMKAC 1 cut(s) 328
XmnI GAANNNNTTC 1 cut(s) 30
XspI CTAG 3 cut(s) 23, 818, 1414
Zsp2I ATGCAT 1 cut(s) 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.