Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0011314

Physical Location & Seq

Genomic Coordinates Forward (+)

729539 .. 731412

Gene Structure 1874 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1006400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGTTGTTTTTTTGCTCTGACGACTTCGAAACATTGCAGGCTTTTATGCCGCCTAGCAACTTCAACAACCTGGATTACACCCTAGATCATCATCAAGAAGATCAACAGATGATGAAGTCTCGTGTCGACGAGACTAATTCCAGTGACAACAACAATGGAATGGTGAATTACTTGATGTACAATCATCATCAACTACAACAACAACAGCAGCAGCAACAAATAAGCACGCAATTAGCTCCAGCAGGGTTTTGTGGTTCAACTAGTACTTCTTTTGACAAACTGAGCTTCGCCGATGTGATGCAGTTTGCCGATTTTGGACCAAAGTTGGCCTTAAACCAAACCAAGATTTCGGAGGAAGAGCCCGCGATTGACCCTGTTTACTTCCTCAAGTTTCCGGTGTTGAACGACAAGTTGGACAACAATCAAGACCAGTCGATCTCTCTCATGGTTCCACAAGCTGAAGAGAGATTCACAGGGTTGGGTGAAGAAGACAAGACAAAGTCAATGGAAGAAGAACAAGACGAGGAAGGTCCGGTTTCTGGTAGTAATAATTCAGTGCAGAAGATCCACTTTCTTGGAGAAGATCTTCAAAATAACCCTATAGGAGGCGGAGTACAACCGGAGCCTGCAGCAGCCAAGAACAAAAGAAAAAGACCACGAACTACCAAGACGACTCAAGAAGTTGAGAGCCAGCGGATGACTCATATTGCGGTTGAAAGAAACCGCAGGAAGCAAATGAATGAGCATCTTCGTGTGCTCCGTTCCCTCATGCCGGGCTCATACGTACAAAGAGGGGATCAAGCTTCTATAATTGGTGGAGCCATAGAGTTCGTGAGAGAACTGGAGCAACTACTTCAGTGCTTGGAATCACAGAAGAGGCGAAGGCTCTTAGGAGAAGCACCTCCAAGACAAGTGGGAGATTCTGCCACGGCGGCGGCTATGGCAGTACAGGCAGCTGAAGGCGGGGGAGGACCATTAATATTTCCGGCCGCTAATTTACCTATTACTAATCCAAATGATCCGATTAAGTTTGTGGACTATGAAACTGGGCTTCGTGAAGAAACTGCAGAGAACAAGTCGTGCTTTGCGGATGTTGAGGTGAAGGTTTTAGGGTTTGATGCGATGATCAAGATTCTATCTCAGAGGAGACCGGGGCAGCTGATTAAGGCCATCGCTGCGCTTGAGGATTTGCAGCTTAATATCCTTCACACTAACATTACCACCATTGAGCAAACTGTTCTATATTCCTTTAATGTCAAGGTTGGGAGTGAATCGAGGTTCACAGCTGAAGATATTGCAAGTTCAGTTCAGCAGATATTCAGTTTTATCCATGCAAACACCGCCAGCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010016 GO:0010052 GO:0010103 GO:0010374 GO:0010377 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0030154 GO:0031056 GO:0031057 GO:0031060 GO:0031061 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033043 GO:0033044 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0045595 GO:0045597 GO:0045893 GO:0045935 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051302 GO:0051782 GO:0060255 GO:0061085 GO:0061086 GO:0065007 GO:0080090 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0140110 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

451

Amino Acids

50.27

Weight (kDa)

4.98

Isoelectric Point (pI)

57.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	231 - 282	1.9e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	364 - 440	3.3e-08	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011314)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24140 AT3G24140
fragaria_vesca	FvH4_1g23290 FvH4_4g15850 FvH4_4g15850
malus_domestica	MD04G1006400.v1.1
prunus_persica	Prupe.1G006600_v2.0.a1 Prupe.1G006600_v2.0.a1 Prupe.1G006600_v2.0.a1
pyrus_communis	pycom04g00580
rosa_chinensis	RchiOBHm_Chr4g0415421
rosa_laevigata	RLG00000008071
rosa_multiflora	Rmu_sc0002402.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359180
rosa_rugosa	Rorug04G0134300
rosa_samantha	Rh4AG194600 Rh4BG193300 Rh4CG205600 Rh4DG192300
rosa_wichuraiana	Rw4G016570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	126
AccII	CGCG	1 cut(s)	365
AclWI	GGATC	3 cut(s)	559, 804, 1013
AcoI	YGGCCR	1 cut(s)	987
AcuI	CTGAAG	4 cut(s)	480, 839, 978, 1308
AfaI	GTAC	5 cut(s)	179, 265, 615, 786, 948
AfiI	CCNNNNNNNGG	3 cut(s)	539, 605, 772
AgsI	TTSAA	5 cut(s)	64, 258, 403, 590, 716
AhlI	ACTAGT	1 cut(s)	260
AjnI	CCWGG	1 cut(s)	69
AjuI	GAANNNNNNNTTGG	2 cut(s)	395, 427
AluBI	AGCT	8 cut(s)	236, 285, 458, 803, 956, 1159, 1195, 1286
AluI	AGCT	8 cut(s)	236, 285, 458, 803, 956, 1159, 1195, 1286
Alw21I	GWGCWC	1 cut(s)	759
Alw26I	GTCTC	3 cut(s)	123, 125, 1141
AlwI	GGATC	3 cut(s)	559, 804, 1013
AoxI	GGCC	3 cut(s)	327, 987, 1167
ApeKI	GCWGC	8 cut(s)	208, 211, 629, 632, 953, 1156, 1175, 1192
AseI	ATTAAT	1 cut(s)	977
Asp700I	GAANNNNTTC	1 cut(s)	585
AspLEI	GCGC	1 cut(s)	1180
AspS9I	GGNCC	3 cut(s)	317, 530, 971
AsuC2I	CCSGG	2 cut(s)	774, 1152
AsuHPI	GGTGA	3 cut(s)	175, 494, 1111
AsuII	TTCGAA	1 cut(s)	27
AvaII	GGWCC	3 cut(s)	317, 530, 971
BanII	GRGCYC	2 cut(s)	363, 779
BauI	CACGAG	1 cut(s)	120
BbsI	GAAGAC	1 cut(s)	495
Bbv12I	GWGCWC	1 cut(s)	759
BbvI	GCAGC	8 cut(s)	220, 223, 641, 644, 965, 1162, 1168, 1204
BccI	CCATC	1 cut(s)	1178
BceAI	ACGGC	1 cut(s)	945
BciT130I	CCWGG	1 cut(s)	71
BclI	TGATCA	1 cut(s)	1125
BcnI	CCSGG	2 cut(s)	774, 1152
BcoDI	GTCTC	3 cut(s)	123, 125, 1141
BcuI	ACTAGT	1 cut(s)	260
BfaI	CTAG	3 cut(s)	54, 83, 261
BfmI	CTRYAG	3 cut(s)	600, 627, 1065
BglI	GCCNNNNNGGC	1 cut(s)	932
BglII	AGATCT	1 cut(s)	583
BmcAI	AGTACT	1 cut(s)	265
Bme1390I	CCNGG	3 cut(s)	71, 774, 1152
Bme18I	GGWCC	3 cut(s)	317, 530, 971
BmgT120I	GGNCC	3 cut(s)	317, 530, 971
BmiI	GGNNCC	3 cut(s)	450, 624, 820
BmrFI	CCNGG	3 cut(s)	71, 774, 1152
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	3 cut(s)	288, 754, 1108
BmuI	ACTGGG	1 cut(s)	1056
BpiI	GAAGAC	1 cut(s)	495
BpmI	CTGGAG	2 cut(s)	222, 863
Bpu14I	TTCGAA	1 cut(s)	27
BpuEI	CTTGAG	3 cut(s)	371, 660, 1202
BpuMI	CCSGG	2 cut(s)	774, 1152
BsaAI	YACGTR	1 cut(s)	784
BsaBI	GATNNNNATC	1 cut(s)	90
BsaI	GGTCTC	1 cut(s)	1141
BsaJI	CCNNGG	2 cut(s)	927, 1151
BsaWI	WCCGGW	3 cut(s)	394, 532, 619
BsaXI	ACNNNNNCTCC	2 cut(s)	597, 627
Bsc4I	CCNNNNNNNGG	3 cut(s)	539, 605, 772
Bse1I	ACTGG	4 cut(s)	141, 430, 846, 1051
Bse3DI	GCAATG	1 cut(s)	32
Bse8I	GATNNNNATC	1 cut(s)	90
BseBI	CCWGG	1 cut(s)	71
BseDI	CCNNGG	2 cut(s)	927, 1151
BseGI	GGATG	2 cut(s)	702, 1096
BseJI	GATNNNNATC	1 cut(s)	90
BseLI	CCNNNNNNNGG	3 cut(s)	539, 605, 772
BseMI	GCAATG	1 cut(s)	32
BseMII	CTCAG	2 cut(s)	272, 1154
BseNI	ACTGG	4 cut(s)	141, 430, 846, 1051
BseRI	GAGGAG	1 cut(s)	1159
BseX3I	CGGCCG	1 cut(s)	987
BseXI	GCAGC	8 cut(s)	220, 223, 641, 644, 965, 1162, 1168, 1204
BsgI	GTGCAG	1 cut(s)	578
Bsh1236I	CGCG	1 cut(s)	365
Bsh1285I	CGRYCG	1 cut(s)	990
BshFI	GGCC	3 cut(s)	329, 989, 1169
BsiEI	CGRYCG	1 cut(s)	990
BsiHKAI	GWGCWC	1 cut(s)	759
BsiSI	CCGG	6 cut(s)	395, 533, 620, 773, 986, 1151
BslI	CCNNNNNNNGG	3 cut(s)	539, 605, 772
BsmAI	GTCTC	3 cut(s)	123, 125, 1141
BsnI	GGCC	3 cut(s)	329, 989, 1169
Bso31I	GGTCTC	1 cut(s)	1141
Bsp119I	TTCGAA	1 cut(s)	27
Bsp1286I	GDGCHC	3 cut(s)	363, 759, 779
Bsp1407I	TGTACA	1 cut(s)	177
Bsp143I	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
BspANI	GGCC	3 cut(s)	329, 989, 1169
BspCNI	CTCAG	2 cut(s)	273, 1153
BspFNI	CGCG	1 cut(s)	365
BspLI	GGNNCC	3 cut(s)	450, 624, 820
BspMAI	CTGCAG	2 cut(s)	631, 1069
BspPI	GGATC	3 cut(s)	559, 804, 1013
BspQI	GCTCTTC	1 cut(s)	351
BspT104I	TTCGAA	1 cut(s)	27
BspTNI	GGTCTC	1 cut(s)	1141
BsrDI	GCAATG	1 cut(s)	32
BsrGI	TGTACA	1 cut(s)	177
BsrI	ACTGG	4 cut(s)	141, 430, 846, 1051
BssECI	CCNNGG	2 cut(s)	927, 1151
BssMI	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
BssSI	CACGAG	1 cut(s)	120
Bst2BI	CACGAG	1 cut(s)	120
Bst2UI	CCWGG	1 cut(s)	71
Bst4CI	ACNGT	1 cut(s)	1237
Bst6I	CTCTTC	3 cut(s)	351, 456, 869
BstAUI	TGTACA	1 cut(s)	177
BstBAI	YACGTR	1 cut(s)	784
BstBI	TTCGAA	1 cut(s)	27
BstC8I	GCNNGC	6 cut(s)	39, 227, 363, 627, 692, 1345
BstDEI	CTNAG	3 cut(s)	281, 889, 1140
BstDSI	CCRYGG	1 cut(s)	927
BstENI	CCTNNNNNAGG	1 cut(s)	603
BstF5I	GGATG	2 cut(s)	702, 1096
BstFNI	CGCG	1 cut(s)	365
BstHHI	GCGC	1 cut(s)	1180
BstKTI	GATC	8 cut(s)	88, 103, 438, 567, 586, 799, 1021, 1128
BstMAI	GTCTC	3 cut(s)	123, 125, 1141
BstMBI	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
BstMCI	CGRYCG	1 cut(s)	990
BstMWI	GCNNNNNNNGC	5 cut(s)	932, 941, 950, 1175, 1340
BstNI	CCWGG	1 cut(s)	71
BstNSI	RCATGY	1 cut(s)	1351
BstSCI	CCNGG	3 cut(s)	69, 772, 1150
BstSFI	CTRYAG	3 cut(s)	600, 627, 1065
BstSNI	TACGTA	1 cut(s)	784
BstUI	CGCG	1 cut(s)	365
BstV1I	GCAGC	8 cut(s)	220, 223, 641, 644, 965, 1162, 1168, 1204
BstV2I	GAAGAC	1 cut(s)	495
BstX2I	RGATCY	2 cut(s)	564, 583
BstXI	CCANNNNNNTGG	1 cut(s)	575
BstYI	RGATCY	2 cut(s)	564, 583
BstZI	CGGCCG	1 cut(s)	987
BsuRI	GGCC	3 cut(s)	329, 989, 1169
BtgI	CCRYGG	1 cut(s)	927
BtgZI	GCGATG	2 cut(s)	1136, 1156
BtsCI	GGATG	2 cut(s)	702, 1096
BtsIMutI	CAGTG	3 cut(s)	148, 561, 863
Cac8I	GCNNGC	6 cut(s)	39, 227, 363, 627, 692, 1345
CfoI	GCGC	1 cut(s)	1180
Cfr13I	GGNCC	3 cut(s)	317, 530, 971
Csp6I	GTAC	5 cut(s)	178, 264, 614, 785, 947
CspCI	CAANNNNNGTGG	2 cut(s)	894, 929
CviAII	CATG	4 cut(s)	445, 769, 1331, 1348
CviQI	GTAC	5 cut(s)	178, 264, 614, 785, 947
DdeI	CTNAG	3 cut(s)	281, 889, 1140
DpnI	GATC	8 cut(s)	87, 102, 437, 566, 585, 798, 1020, 1127
DpnII	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
EaeI	YGGCCR	1 cut(s)	987
EagI	CGGCCG	1 cut(s)	987
Eam1104I	CTCTTC	3 cut(s)	351, 456, 869
EarI	CTCTTC	3 cut(s)	351, 456, 869
EciI	GGCGGA	1 cut(s)	624
EclXI	CGGCCG	1 cut(s)	987
Eco105I	TACGTA	1 cut(s)	784
Eco24I	GRGCYC	2 cut(s)	363, 779
Eco31I	GGTCTC	1 cut(s)	1141
Eco47I	GGWCC	3 cut(s)	317, 530, 971
Eco52I	CGGCCG	1 cut(s)	987
Eco57I	CTGAAG	4 cut(s)	480, 839, 978, 1308
EcoNI	CCTNNNNNAGG	1 cut(s)	603
EcoRII	CCWGG	1 cut(s)	69
EcoT38I	GRGCYC	2 cut(s)	363, 779
FaeI	CATG	4 cut(s)	448, 772, 1334, 1351
FalI	AAGNNNNNCTT	6 cut(s)	314, 346, 554, 586, 1067, 1099
FatI	CATG	4 cut(s)	444, 768, 1330, 1347
FauI	CCCGC	2 cut(s)	370, 956
FbaI	TGATCA	1 cut(s)	1125
FblI	GTMKAC	1 cut(s)	126
FokI	GGATG	2 cut(s)	709, 1103
FriOI	GRGCYC	2 cut(s)	363, 779
FspBI	CTAG	3 cut(s)	54, 83, 261
GlaI	GCGC	1 cut(s)	1179
GsuI	CTGGAG	2 cut(s)	222, 863
HaeIII	GGCC	3 cut(s)	329, 989, 1169
HapII	CCGG	6 cut(s)	395, 533, 620, 773, 986, 1151
HhaI	GCGC	1 cut(s)	1180
Hin1II	CATG	4 cut(s)	448, 772, 1334, 1351
Hin6I	GCGC	1 cut(s)	1178
HinP1I	GCGC	1 cut(s)	1178
HincII	GTYRAC	1 cut(s)	127
HindII	GTYRAC	1 cut(s)	127
HindIII	AAGCTT	1 cut(s)	801
HinfI	GANTC	7 cut(s)	468, 673, 700, 866, 920, 1132, 1271
HpaII	CCGG	6 cut(s)	395, 533, 620, 773, 986, 1151
HphI	GGTGA	3 cut(s)	175, 494, 1111
Hpy166II	GTNNAC	4 cut(s)	127, 379, 1036, 1281
Hpy188I	TCNGA	4 cut(s)	19, 352, 1023, 1143
Hpy188III	TCNNGA	6 cut(s)	95, 425, 677, 832, 1055, 1129
Hpy8I	GTNNAC	4 cut(s)	127, 379, 1036, 1281
Hpy99I	CGWCG	1 cut(s)	131
HpyAV	CCTTC	5 cut(s)	521, 876, 953, 1096, 1214
HpyCH4III	ACNGT	1 cut(s)	1237
HpyCH4IV	ACGT	1 cut(s)	783
HpyCH4V	TGCA	8 cut(s)	37, 301, 559, 629, 1067, 1192, 1298, 1334
HpyF10VI	GCNNNNNNNGC	5 cut(s)	932, 941, 950, 1175, 1340
HpyF3I	CTNAG	3 cut(s)	281, 889, 1140
HpySE526I	ACGT	1 cut(s)	783
Hsp92II	CATG	4 cut(s)	448, 772, 1334, 1351
HspAI	GCGC	1 cut(s)	1178
Ksp22I	TGATCA	1 cut(s)	1125
Kzo9I	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
LguI	GCTCTTC	1 cut(s)	351
LmnI	GCTCC	5 cut(s)	241, 622, 762, 818, 844
Lsp1109I	GCAGC	8 cut(s)	220, 223, 641, 644, 965, 1162, 1168, 1204
LweI	GCATC	3 cut(s)	288, 754, 1108
MaeI	CTAG	3 cut(s)	54, 83, 261
MaeII	ACGT	1 cut(s)	783
MaeIII	GTNAC	1 cut(s)	143
MalI	GATC	8 cut(s)	87, 102, 437, 566, 585, 798, 1020, 1127
MboI	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
MflI	RGATCY	2 cut(s)	564, 583
MhlI	GDGCHC	3 cut(s)	363, 759, 779
MluCI	AATT	6 cut(s)	136, 166, 230, 550, 810, 994
MlyI	GAGTC	2 cut(s)	667, 694
MmeI	TCCRAC	1 cut(s)	393
MroXI	GAANNNNTTC	1 cut(s)	585
MseI	TTAA	6 cut(s)	332, 977, 1026, 1164, 1197, 1251
MslI	CAYNNNNRTG	1 cut(s)	750
MspA1I	CMGCKG	4 cut(s)	694, 956, 1159, 1286
MspI	CCGG	6 cut(s)	395, 533, 620, 773, 986, 1151
MspR9I	CCNGG	3 cut(s)	71, 774, 1152
MvaI	CCWGG	1 cut(s)	71
MvnI	CGCG	1 cut(s)	365
MwoI	GCNNNNNNNGC	5 cut(s)	932, 941, 950, 1175, 1340
NciI	CCSGG	2 cut(s)	774, 1152
NdeII	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
NlaIII	CATG	4 cut(s)	448, 772, 1334, 1351
NlaIV	GGNNCC	3 cut(s)	450, 624, 820
NmuCI	GTSAC	1 cut(s)	143
NspI	RCATGY	1 cut(s)	1351
NspV	TTCGAA	1 cut(s)	27
PciSI	GCTCTTC	1 cut(s)	351
PcsI	WCGNNNNNNNCGW	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	585
PfeI	GAWTC	5 cut(s)	468, 866, 920, 1132, 1271
PflFI	GACNNNGTC	1 cut(s)	499
PleI	GAGTC	2 cut(s)	667, 694
PpsI	GAGTC	2 cut(s)	667, 694
Ppu21I	YACGTR	1 cut(s)	784
PshBI	ATTAAT	1 cut(s)	977
Psp6I	CCWGG	1 cut(s)	69
PspGI	CCWGG	1 cut(s)	69
PspN4I	GGNNCC	3 cut(s)	450, 624, 820
PspPI	GGNCC	3 cut(s)	317, 530, 971
PstI	CTGCAG	2 cut(s)	631, 1069
PsuI	RGATCY	2 cut(s)	564, 583
PsyI	GACNNNGTC	1 cut(s)	499
PvuII	CAGCTG	3 cut(s)	956, 1159, 1286
RsaI	GTAC	5 cut(s)	179, 265, 615, 786, 948
RsaNI	GTAC	5 cut(s)	178, 264, 614, 785, 947
RseI	CAYNNNNRTG	1 cut(s)	750
SalI	GTCGAC	1 cut(s)	125
SapI	GCTCTTC	1 cut(s)	351
SaqAI	TTAA	6 cut(s)	332, 977, 1026, 1164, 1197, 1251
Sau3AI	GATC	8 cut(s)	85, 100, 435, 564, 583, 796, 1018, 1125
Sau96I	GGNCC	3 cut(s)	317, 530, 971
ScaI	AGTACT	1 cut(s)	265
SchI	GAGTC	2 cut(s)	667, 694
ScrFI	CCNGG	3 cut(s)	71, 774, 1152
SduI	GDGCHC	3 cut(s)	363, 759, 779
SfaNI	GCATC	3 cut(s)	288, 754, 1108
SfcI	CTRYAG	3 cut(s)	600, 627, 1065
SfuI	TTCGAA	1 cut(s)	27
SinI	GGWCC	3 cut(s)	317, 530, 971
SmiMI	CAYNNNNRTG	1 cut(s)	750
SmlI	CTYRAG	3 cut(s)	386, 675, 1181
SmoI	CTYRAG	3 cut(s)	386, 675, 1181
SnaBI	TACGTA	1 cut(s)	784
SpeI	ACTAGT	1 cut(s)	260
Sse9I	AATT	6 cut(s)	136, 166, 230, 550, 810, 994
SspI	AATATT	1 cut(s)	981
SspMI	CTAG	3 cut(s)	54, 83, 261
StyD4I	CCNGG	3 cut(s)	69, 772, 1150
TaaI	ACNGT	1 cut(s)	1237
TaiI	ACGT	1 cut(s)	786
TaqI	TCGA	4 cut(s)	27, 126, 434, 1274
TasI	AATT	6 cut(s)	136, 166, 230, 550, 810, 994
TatI	WGTACW	4 cut(s)	177, 263, 613, 946
TauI	GCSGC	4 cut(s)	52, 935, 938, 992
TfiI	GAWTC	5 cut(s)	468, 866, 920, 1132, 1271
Tru1I	TTAA	6 cut(s)	332, 977, 1026, 1164, 1197, 1251
Tru9I	TTAA	6 cut(s)	332, 977, 1026, 1164, 1197, 1251
TscAI	CASTG	3 cut(s)	148, 561, 863
TseFI	GTSAC	1 cut(s)	143
TseI	GCWGC	8 cut(s)	208, 211, 629, 632, 953, 1156, 1175, 1192
Tsp45I	GTSAC	1 cut(s)	143
TspDTI	ATGAA	3 cut(s)	128, 752, 1056
TspGWI	ACGGA	1 cut(s)	749
TspRI	CASTG	3 cut(s)	148, 561, 863
Tth111I	GACNNNGTC	1 cut(s)	499
VpaK11BI	GGWCC	3 cut(s)	317, 530, 971
VspI	ATTAAT	1 cut(s)	977
XagI	CCTNNNNNAGG	1 cut(s)	603
XceI	RCATGY	1 cut(s)	1351
XmiI	GTMKAC	1 cut(s)	126
XmnI	GAANNNNTTC	1 cut(s)	585
XspI	CTAG	3 cut(s)	54, 83, 261
ZrmI	AGTACT	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.