Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001494

Physical Location & Seq

Genomic Coordinates Forward (+)

21643391 .. 21652877

Gene Structure 9487 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0134300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGAGGCTGCCAACAACAGCCCCGGAATCAGAGAAGAAGGCGAGCTCTCTCCCGATGACGCTGACGACATTCAAGTTACTAAAAGGCTCAAATCTGTGGTTGATGATACGATTGATGATGCTGAAGATGGGTTCATTGACATTGATTATATGTTTAGCTATGTCTGTGCTTTGTGTCATGATGGCGGTGACCTCTTGTGTTGTGAAGGGAGGTGCCTAAGGTCATTTCATGCAACTCCAGAGACTGGTCAGGACTCTGGTTGCGTATCTCTTGGCTTTACGAAGGATGCAGTAGATGCAATGCCTAATTTCTTATGCCAGAACTGCAAATACAAACAACACCAGTGCTTTGTTTGTGGAGAGTTGGGATCTTCAGACAAATCTTCAGGTGCTGCTGAGGTTGTTCCCTGTGTTTCTCCGGTATGTGGTCAATTCTACCATCCACATTGTGTTGCAAAAGAACTTTCTCAAGATAATGGAGTTCCTGCTGAAGAACTTGAGAAAAAGATTACAATGGGCGAATCTTTTACATGTCCAGTTCATAAGTGCCGCATTTGTAAACAAGGAGAAAATATTAAGGATCACGGTTTACAATTTGCTGTGTGCGTGCTCTGTCCCAAGTCATACCACAGGAAATGCCTGCCAAGTTTTATTCCTTTCGAAGACAAAGAAGGAACATGTGGTGAAGGAAAATTAGTAACAAGAGCTTGGGACGGAATAATGCCTAACCGTATACTAATATATTGCATAAAACACGAGGAAGATAAAACAACTAAACTTTTTGTAAGGGACCACATAAAATTTCCTGCTGTTAAAGAGAAGTGGAAACTGACACCACAGTCTATTGTAGACAGAGAGCAAGTTGCGTCTATGATGATAAATCCTTCATTGGAAGAATCATACAGAGAAAGAACTGCAAACACAGAATTCAAACAGAAGGAGAATCCATCTTTTGCTAGAAAGCGTGGAAATTTGGATGCACCTAATACAGATACAAAAAGGAGAATATTGGGCTTAATGGAAAAGGCTGCATCTTCAATAACCTTGAAAGATATATTAAGGAAGTACCCAGTTCCATCTCATACTTACTCCATGAAAAATGTTGTGGACACGAAAATGTCATTGGGAAAGGTGGAAGTCTCGATTGAGGCCGCTAGAACAGCATTGAGAAAACTAGATGAAGGGTGCAGTACCAAAGATGCAGAAGCTGTTTGTGGGCCTGAGGTTCTTAAACAGATATTTAGATGGAAGACAAAGATGAATGTTTATCTCGGTCCTTTCCTTCATGGCATGCGCTACACATCCTTTGGTCGCCATTTTACGAACGTGGAGAAACTAAAACAGATTGTAGATAAGCTCCATTGGTATGTGAAGACTGGAGATATGATTGTGGACTTTTGCTGTGGTGCTAATGACTTCAGTGTCATTATGAAAAAAAAGCTTGAAGAGACGGGAAAGAATTGCTACTACAAGAACTATGACCTTTTTCAAGCTAAGAATGATTTTAATTTCGAAAAGAAGGACTGGATGACTGTCCAGAGGGAGGAGCTACCCGTGGGATCTCGGTTGATCATGGGGCTGAACCCTCCTTTTGGAGTTAAAGCATCTCGGGCGAACCAGTTCATTGATAAGGCTCTCGGGTTTAATCCAAAGCTCCTAATTCTTATTGTTCCATCAGAAACACAAAGGCTGGATCAAAAGACATCACCTTATGATCTGATTTGGGAGAATCCTCAGCTTCTATCAGGAAAGTCATTTTATCTACCTGGATCAGTTGATGTGAATGGTAAACATATAGACCAGCATAATGTGATTCCACCTCCTCTCTATCTCTGGAGTCGTCCTGATTGGTCTTCAGAACACTATGCTATAGCTCAAGAGCATGGTCACATTTCTATACCACAGTCAGCAACGGTTGAGAACACCAGCACTCATTTTCAAGGCAGAATTAGGGTGCACAGAAATGTTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L13

Protein Analysis

657

Amino Acids

74.26

Weight (kDa)

7.03

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_NSD	PF22908	112 - 181	1.7e-18	Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
Mtase_EDM2	PF26055	456 - 626	6.6e-90	EDM2 methyltransferase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07110 AT3G07110 AT3G24830 AT4G13170 AT5G48760 AT5G48760
fragaria_vesca	FvH4_1g23280 FvH4_1g23310 FvH4_4g15860 FvH4_4g15860
malus_domestica	MD00G1018900.v1.1 MD04G1008000.v1.1 MD05G1175100.v1.1 MD10G1164200.v1.1
prunus_persica	Prupe.1G006700_v2.0.a1 Prupe.1G006700_v2.0.a1 Prupe.8G202800_v2.0.a1
pyrus_communis	pycom04g00590 pycom05g16200 pycom10g14160 pycom13g29610
rosa_chinensis	RchiOBHm_Chr4g0415441 RchiOBHm_Chr6g0284831 RchiOBHm_Chr7g0231251
rosa_laevigata	RLG00000001424 RLG00000008070 RLG00000012712
rosa_multiflora	Rmu_sc0000686.1_g000013 Rmu_sc0003396.1_g000002 Rmu_sc0004076.1_g000027 Rmu_sc0004571.1_g000007 Rmu_sc0034036.1_g000003
rosa_roxburghii	Rroxscaffold_3G00229390 Rroxscaffold_5G00359200 Rroxscaffold_7G00184330
rosa_rugosa	Rorug04G0134300 Rorug06G0167300 Rorug07G0265500
rosa_samantha	Rh4AG194700 Rh4BG193400 Rh4CG205700 Rh4DG192400 Rh6AG280000 Rh6BG280100 Rh6DG275200 Rh7AG419100 Rh7BG394400 Rh7DG412800
rosa_wichuraiana	Rw4G016580 Rw6G024070 Rw7G034650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	838, 1421
AccB1I	GGYRCC	1 cut(s)	213
AccB7I	CCANNNNNTGG	1 cut(s)	245
AccI	GTMKAC	2 cut(s)	733, 849
AciI	CCGC	3 cut(s)	186, 550, 1152
AclWI	GGATC	5 cut(s)	376, 588, 1567, 1701, 1777
AcsI	RAATTY	3 cut(s)	800, 926, 970
AcuI	CTGAAG	6 cut(s)	144, 357, 369, 510, 1402, 1839
AdeI	CACNNNGTG	1 cut(s)	449
AfaI	GTAC	2 cut(s)	1067, 1192
AfiI	CCNNNNNNNGG	4 cut(s)	245, 425, 1543, 1592
AflIII	ACRYGT	2 cut(s)	530, 677
AgsI	TTSAA	7 cut(s)	74, 931, 1038, 1048, 1445, 1490, 1940
AjnI	CCWGG	1 cut(s)	1765
AjuI	GAANNNNNNNTTGG	2 cut(s)	1106, 1138
Alw21I	GWGCWC	3 cut(s)	48, 612, 1959
Alw26I	GTCTC	3 cut(s)	236, 1144, 1442
Alw44I	GTGCAC	1 cut(s)	1955
AlwI	GGATC	5 cut(s)	376, 588, 1567, 1701, 1777
AlwNI	CAGNNNCTG	3 cut(s)	245, 392, 1208
Ama87I	CYCGRG	2 cut(s)	1608, 1637
AoxI	GGCC	2 cut(s)	1149, 1217
ApaLI	GTGCAC	1 cut(s)	1955
ApeKI	GCWGC	3 cut(s)	8, 392, 1028
ApoI	RAATTY	3 cut(s)	800, 926, 970
Asp700I	GAANNNNTTC	1 cut(s)	1619
AspLEI	GCGC	1 cut(s)	1296
AspS9I	GGNCC	3 cut(s)	790, 1217, 1274
AsuC2I	CCSGG	1 cut(s)	24
AsuHPI	GGTGA	3 cut(s)	200, 695, 1698
AsuII	TTCGAA	2 cut(s)	660, 1512
AvaI	CYCGRG	2 cut(s)	1608, 1637
AvaII	GGWCC	2 cut(s)	790, 1274
AxyI	CCTNAGG	2 cut(s)	218, 1221
BaeGI	GKGCMC	1 cut(s)	1959
BanI	GGYRCC	1 cut(s)	213
BanII	GRGCYC	1 cut(s)	48
BauI	CACGAG	1 cut(s)	755
BbsI	GAAGAC	4 cut(s)	669, 1256, 1379, 1845
Bbv12I	GWGCWC	3 cut(s)	48, 612, 1959
BbvCI	CCTCAGC	2 cut(s)	396, 1734
BbvI	GCAGC	2 cut(s)	379, 1015
BccI	CCATC	7 cut(s)	122, 176, 447, 955, 1084, 1239, 1681
BciT130I	CCWGG	1 cut(s)	1767
BclI	TGATCA	1 cut(s)	1569
BcnI	CCSGG	1 cut(s)	24
BcoDI	GTCTC	3 cut(s)	236, 1144, 1442
BfaI	CTAG	3 cut(s)	957, 1155, 1175
BfmI	CTRYAG	1 cut(s)	1869
BisI	GCNGC	5 cut(s)	9, 393, 550, 1029, 1152
BlsI	GCNGC	5 cut(s)	10, 394, 551, 1030, 1153
Bme1390I	CCNGG	2 cut(s)	24, 1767
Bme18I	GGWCC	2 cut(s)	790, 1274
BmeT110I	CYCGRG	2 cut(s)	1608, 1637
BmgT120I	GGNCC	3 cut(s)	790, 1217, 1274
BmiI	GGNNCC	2 cut(s)	215, 791
BmrFI	CCNGG	2 cut(s)	24, 1767
BmrI	ACTGGG	1 cut(s)	1064
BmsI	GCATC	7 cut(s)	109, 277, 286, 967, 1040, 1189, 1613
BmuI	ACTGGG	1 cut(s)	1064
BpiI	GAAGAC	4 cut(s)	669, 1256, 1379, 1845
BpmI	CTGGAG	3 cut(s)	222, 1398, 1855
Bpu10I	CCTNAGC	2 cut(s)	396, 1734
Bpu14I	TTCGAA	2 cut(s)	660, 1512
BpuEI	CTTGAG	3 cut(s)	453, 518, 1860
BpuMI	CCSGG	1 cut(s)	24
BsaJI	CCNNGG	2 cut(s)	22, 1554
BsaWI	WCCGGW	1 cut(s)	418
Bsc4I	CCNNNNNNNGG	4 cut(s)	245, 425, 1543, 1592
Bse1I	ACTGG	7 cut(s)	250, 343, 536, 1070, 1381, 1529, 1618
Bse21I	CCTNAGG	2 cut(s)	218, 1221
Bse3DI	GCAATG	1 cut(s)	306
BseBI	CCWGG	1 cut(s)	1767
BseDI	CCNNGG	2 cut(s)	22, 1554
BseGI	GGATG	5 cut(s)	292, 439, 982, 1301, 1533
BseLI	CCNNNNNNNGG	4 cut(s)	245, 425, 1543, 1592
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	3 cut(s)	387, 1212, 1748
BseNI	ACTGG	7 cut(s)	250, 343, 536, 1070, 1381, 1529, 1618
BseRI	GAGGAG	2 cut(s)	1559, 1812
BseSI	GKGCMC	1 cut(s)	1959
BseXI	GCAGC	2 cut(s)	379, 1015
BsgI	GTGCAG	1 cut(s)	1207
BshFI	GGCC	2 cut(s)	1151, 1219
BshNI	GGYRCC	1 cut(s)	213
BsiHKAI	GWGCWC	3 cut(s)	48, 612, 1959
BsiHKCI	CYCGRG	2 cut(s)	1608, 1637
BsiSI	CCGG	2 cut(s)	24, 419
BslFI	GGGAC	3 cut(s)	600, 725, 803
BslI	CCNNNNNNNGG	4 cut(s)	245, 425, 1543, 1592
BsmAI	GTCTC	3 cut(s)	236, 1144, 1442
BsmBI	CGTCTC	1 cut(s)	1442
BsmFI	GGGAC	3 cut(s)	600, 725, 803
BsnI	GGCC	2 cut(s)	1151, 1219
BsoBI	CYCGRG	2 cut(s)	1608, 1637
Bsp119I	TTCGAA	2 cut(s)	660, 1512
Bsp1286I	GDGCHC	3 cut(s)	48, 612, 1959
Bsp143I	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
BspACI	CCGC	3 cut(s)	186, 550, 1152
BspANI	GGCC	2 cut(s)	1151, 1219
BspCNI	CTCAG	3 cut(s)	388, 1213, 1747
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	2 cut(s)	215, 791
BspPI	GGATC	5 cut(s)	376, 588, 1567, 1701, 1777
BspT104I	TTCGAA	2 cut(s)	660, 1512
BspT107I	GGYRCC	1 cut(s)	213
BsrDI	GCAATG	1 cut(s)	306
BsrI	ACTGG	7 cut(s)	250, 343, 536, 1070, 1381, 1529, 1618
BssECI	CCNNGG	2 cut(s)	22, 1554
BssMI	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
BssNAI	GTATAC	1 cut(s)	734
BssSI	CACGAG	1 cut(s)	755
Bst1107I	GTATAC	1 cut(s)	734
Bst2BI	CACGAG	1 cut(s)	755
Bst2UI	CCWGG	1 cut(s)	1767
Bst4CI	ACNGT	6 cut(s)	587, 731, 840, 1534, 1905, 1915
Bst6I	CTCTTC	1 cut(s)	1440
BstAPI	GCANNNNNTGC	1 cut(s)	296
BstBI	TTCGAA	2 cut(s)	660, 1512
BstC8I	GCNNGC	4 cut(s)	44, 608, 641, 1292
BstDEI	CTNAG	5 cut(s)	218, 396, 1221, 1494, 1734
BstDSI	CCRYGG	1 cut(s)	1554
BstEII	GGTNACC	1 cut(s)	188
BstF5I	GGATG	5 cut(s)	292, 439, 982, 1301, 1533
BstHHI	GCGC	1 cut(s)	1296
BstKTI	GATC	7 cut(s)	371, 583, 1562, 1572, 1696, 1717, 1772
BstMAI	GTCTC	3 cut(s)	236, 1144, 1442
BstMBI	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
BstMWI	GCNNNNNNNGC	4 cut(s)	296, 324, 1160, 1610
BstNI	CCWGG	1 cut(s)	1767
BstNSI	RCATGY	3 cut(s)	534, 681, 1294
BstPI	GGTNACC	1 cut(s)	188
BstSCI	CCNGG	2 cut(s)	22, 1765
BstSFI	CTRYAG	1 cut(s)	1869
BstSLI	GKGCMC	1 cut(s)	1959
BstV1I	GCAGC	2 cut(s)	379, 1015
BstV2I	GAAGAC	4 cut(s)	669, 1256, 1379, 1845
BstX2I	RGATCY	2 cut(s)	368, 1559
BstYI	RGATCY	2 cut(s)	368, 1559
BstZ17I	GTATAC	1 cut(s)	734
Bsu36I	CCTNAGG	2 cut(s)	218, 1221
BsuRI	GGCC	2 cut(s)	1151, 1219
BtgI	CCRYGG	1 cut(s)	1554
BtsCI	GGATG	5 cut(s)	292, 439, 982, 1301, 1533
BtsIMutI	CAGTG	2 cut(s)	350, 1426
Cac8I	GCNNGC	4 cut(s)	44, 608, 641, 1292
CaiI	CAGNNNCTG	3 cut(s)	245, 392, 1208
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	1 cut(s)	1296
Cfr13I	GGNCC	3 cut(s)	790, 1217, 1274
CseI	GACGC	2 cut(s)	68, 855
Csp6I	GTAC	2 cut(s)	1066, 1191
CviAII	CATG	9 cut(s)	179, 230, 531, 678, 1093, 1286, 1291, 1573, 1883
CviQI	GTAC	2 cut(s)	1066, 1191
DdeI	CTNAG	5 cut(s)	218, 396, 1221, 1494, 1734
DpnI	GATC	7 cut(s)	370, 582, 1561, 1571, 1695, 1716, 1771
DpnII	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
DraIII	CACNNNGTG	1 cut(s)	449
DrdI	GACNNNNNNGTC	2 cut(s)	838, 1421
DseDI	GACNNNNNNGTC	2 cut(s)	838, 1421
Eam1104I	CTCTTC	1 cut(s)	1440
EarI	CTCTTC	1 cut(s)	1440
Ecl136II	GAGCTC	1 cut(s)	46
Eco24I	GRGCYC	1 cut(s)	48
Eco47I	GGWCC	2 cut(s)	790, 1274
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	6 cut(s)	144, 357, 369, 510, 1402, 1839
Eco81I	CCTNAGG	2 cut(s)	218, 1221
Eco88I	CYCGRG	2 cut(s)	1608, 1637
Eco91I	GGTNACC	1 cut(s)	188
EcoICRI	GAGCTC	1 cut(s)	46
EcoO65I	GGTNACC	1 cut(s)	188
EcoRI	GAATTC	1 cut(s)	926
EcoRII	CCWGG	1 cut(s)	1765
EcoT38I	GRGCYC	1 cut(s)	48
Esp3I	CGTCTC	1 cut(s)	1442
FaeI	CATG	9 cut(s)	182, 233, 534, 681, 1096, 1289, 1294, 1576, 1886
FaqI	GGGAC	3 cut(s)	600, 725, 803
FatI	CATG	9 cut(s)	178, 229, 530, 677, 1092, 1285, 1290, 1572, 1882
FbaI	TGATCA	1 cut(s)	1569
FblI	GTMKAC	2 cut(s)	733, 849
Fnu4HI	GCNGC	5 cut(s)	9, 393, 550, 1029, 1152
FokI	GGATG	5 cut(s)	299, 426, 989, 1288, 1540
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	5 cut(s)	9, 393, 550, 1029, 1152
FspBI	CTAG	3 cut(s)	957, 1155, 1175
GlaI	GCGC	1 cut(s)	1295
GluI	GCNGC	5 cut(s)	9, 393, 550, 1029, 1152
GsuI	CTGGAG	3 cut(s)	222, 1398, 1855
HaeIII	GGCC	2 cut(s)	1151, 1219
HapII	CCGG	2 cut(s)	24, 419
HgaI	GACGC	2 cut(s)	68, 855
HhaI	GCGC	1 cut(s)	1296
Hin1II	CATG	9 cut(s)	182, 233, 534, 681, 1096, 1289, 1294, 1576, 1886
Hin6I	GCGC	1 cut(s)	1294
HinP1I	GCGC	1 cut(s)	1294
HindIII	AAGCTT	1 cut(s)	1439
HinfI	GANTC	8 cut(s)	27, 254, 521, 896, 943, 1729, 1813, 1837
HpaII	CCGG	2 cut(s)	24, 419
HphI	GGTGA	3 cut(s)	200, 695, 1698
Hpy166II	GTNNAC	8 cut(s)	560, 590, 734, 850, 1108, 1393, 1790, 1957
Hpy188I	TCNGA	5 cut(s)	32, 376, 1678, 1719, 1858
Hpy8I	GTNNAC	8 cut(s)	560, 590, 734, 850, 1108, 1393, 1790, 1957
HpyCH4III	ACNGT	6 cut(s)	587, 731, 840, 1534, 1905, 1915
HpyCH4IV	ACGT	1 cut(s)	1326
HpyF10VI	GCNNNNNNNGC	4 cut(s)	296, 324, 1160, 1610
HpyF3I	CTNAG	5 cut(s)	218, 396, 1221, 1494, 1734
HpySE526I	ACGT	1 cut(s)	1326
Hsp92II	CATG	9 cut(s)	182, 233, 534, 681, 1096, 1289, 1294, 1576, 1886
HspAI	GCGC	1 cut(s)	1294
Ksp22I	TGATCA	1 cut(s)	1569
Kzo9I	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
LmnI	GCTCC	3 cut(s)	1362, 1546, 1659
Lsp1109I	GCAGC	2 cut(s)	379, 1015
LweI	GCATC	7 cut(s)	109, 277, 286, 967, 1040, 1189, 1613
MaeI	CTAG	3 cut(s)	957, 1155, 1175
MaeII	ACGT	1 cut(s)	1326
MaeIII	GTNAC	4 cut(s)	76, 188, 697, 1886
MalI	GATC	7 cut(s)	370, 582, 1561, 1571, 1695, 1716, 1771
MboI	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
MflI	RGATCY	2 cut(s)	368, 1559
MhlI	GDGCHC	3 cut(s)	48, 612, 1959
MlyI	GAGTC	2 cut(s)	248, 1846
MroXI	GAANNNNTTC	1 cut(s)	1619
MseI	TTAA	8 cut(s)	576, 813, 1016, 1058, 1230, 1506, 1599, 1644
MslI	CAYNNNNRTG	3 cut(s)	1115, 1365, 1962
MspI	CCGG	2 cut(s)	24, 419
MspR9I	CCNGG	2 cut(s)	24, 1767
MvaI	CCWGG	1 cut(s)	1767
MwoI	GCNNNNNNNGC	4 cut(s)	296, 324, 1160, 1610
NciI	CCSGG	1 cut(s)	24
NdeII	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
NlaIII	CATG	9 cut(s)	182, 233, 534, 681, 1096, 1289, 1294, 1576, 1886
NlaIV	GGNNCC	2 cut(s)	215, 791
NmuCI	GTSAC	2 cut(s)	188, 1886
NspI	RCATGY	3 cut(s)	534, 681, 1294
NspV	TTCGAA	2 cut(s)	660, 1512
PaeI	GCATGC	1 cut(s)	1294
PagI	TCATGA	1 cut(s)	178
PciI	ACATGT	2 cut(s)	530, 677
PdmI	GAANNNNTTC	1 cut(s)	1619
PfeI	GAWTC	6 cut(s)	27, 521, 896, 943, 1729, 1813
PflMI	CCANNNNNTGG	1 cut(s)	245
PkrI	GCNGC	5 cut(s)	10, 394, 551, 1030, 1153
PleI	GAGTC	2 cut(s)	248, 1845
PpsI	GAGTC	2 cut(s)	248, 1845
PscI	ACATGT	2 cut(s)	530, 677
Psp124BI	GAGCTC	1 cut(s)	48
Psp6I	CCWGG	1 cut(s)	1765
PspEI	GGTNACC	1 cut(s)	188
PspGI	CCWGG	1 cut(s)	1765
PspN4I	GGNNCC	2 cut(s)	215, 791
PspPI	GGNCC	3 cut(s)	790, 1217, 1274
PsrI	GAACNNNNNNTAC	2 cut(s)	314, 346
PstNI	CAGNNNCTG	3 cut(s)	245, 392, 1208
PsuI	RGATCY	2 cut(s)	368, 1559
RsaI	GTAC	2 cut(s)	1067, 1192
RsaNI	GTAC	2 cut(s)	1066, 1191
RseI	CAYNNNNRTG	3 cut(s)	1115, 1365, 1962
SacI	GAGCTC	1 cut(s)	48
SaqAI	TTAA	8 cut(s)	576, 813, 1016, 1058, 1230, 1506, 1599, 1644
SatI	GCNGC	5 cut(s)	9, 393, 550, 1029, 1152
Sau3AI	GATC	7 cut(s)	368, 580, 1559, 1569, 1693, 1714, 1769
Sau96I	GGNCC	3 cut(s)	790, 1217, 1274
SchI	GAGTC	2 cut(s)	248, 1846
ScrFI	CCNGG	2 cut(s)	24, 1767
SduI	GDGCHC	3 cut(s)	48, 612, 1959
SfaNI	GCATC	7 cut(s)	109, 277, 286, 967, 1040, 1189, 1613
SfcI	CTRYAG	1 cut(s)	1869
SfuI	TTCGAA	2 cut(s)	660, 1512
SinI	GGWCC	2 cut(s)	790, 1274
SmiMI	CAYNNNNRTG	3 cut(s)	1115, 1365, 1962
SmlI	CTYRAG	3 cut(s)	468, 497, 1875
SmoI	CTYRAG	3 cut(s)	468, 497, 1875
SphI	GCATGC	1 cut(s)	1294
SsiI	CCGC	3 cut(s)	186, 550, 1152
SspI	AATATT	2 cut(s)	574, 1008
SspMI	CTAG	3 cut(s)	957, 1155, 1175
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	2 cut(s)	22, 1765
TaaI	ACNGT	6 cut(s)	587, 731, 840, 1534, 1905, 1915
TaiI	ACGT	1 cut(s)	1329
TaqI	TCGA	3 cut(s)	660, 1142, 1512
TaqII	GACCGA	1 cut(s)	1262
TauI	GCSGC	2 cut(s)	552, 1154
TfiI	GAWTC	6 cut(s)	27, 521, 896, 943, 1729, 1813
Tru1I	TTAA	8 cut(s)	576, 813, 1016, 1058, 1230, 1506, 1599, 1644
Tru9I	TTAA	8 cut(s)	576, 813, 1016, 1058, 1230, 1506, 1599, 1644
TscAI	CASTG	2 cut(s)	350, 1426
TseFI	GTSAC	2 cut(s)	188, 1886
TseI	GCWGC	3 cut(s)	8, 392, 1028
Tsp45I	GTSAC	2 cut(s)	188, 1886
TspGWI	ACGGA	1 cut(s)	729
TspRI	CASTG	2 cut(s)	350, 1426
Van91I	CCANNNNNTGG	1 cut(s)	245
VneI	GTGCAC	1 cut(s)	1955
VpaK11BI	GGWCC	2 cut(s)	790, 1274
XapI	RAATTY	3 cut(s)	800, 926, 970
XceI	RCATGY	3 cut(s)	534, 681, 1294
XmiI	GTMKAC	2 cut(s)	733, 849
XmnI	GAANNNNTTC	1 cut(s)	1619
XspI	CTAG	3 cut(s)	957, 1155, 1175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.