Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0015205

Physical Location & Seq

Genomic Coordinates Forward (+)

20829972 .. 20831704

Gene Structure 1733 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1122700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGCTATCCATGGTCTCCCACCCACACCATACACCAAACCCCATCACCTCCGCCTGCTTCTGCTCAAAAGACCTTCACTTCCCTGTCTTTCCAGCTTTCTCACCGCCACGACCAGCTCCTAACCCATTCTTCCCTCTCCTATTCAACCCCTACCACCACCTATCACCACCCCTCCCTCCGAACTTCACTCCGCAGCAGCTCCTCGACGCCATTCGCCGCCAAAATGATGAGTCATCGGTGCTCCGCCTTTTCTGCTGGGCCTCCAAGCAGGCCAATTTCACCCCCGACTCCACTGTGTACGAGGAGGTCCTCCGCAAGCTTGGAAGGGTGGGGTCTTTCGAGTCGATGAGGAGCATTTTAGACGAGATGAAGCTTGTCGGCTGCTCGATTAGCTCAGGTACCTTTTTTATTTTTATTCAGAGCTATGCAGCCTTTGATTTGTACGAAGAGATTCTTGGTGTTGTGGAAATGATGGAAGGCCAATTCGGAGCCCATCAGATAAGGCCTGCCCTTTTGTTGATAGATGAGATGTCGAACCAGGGTTTGCATCCGGATGAGAAAACGTTCACGACACTAATGCAGGGGTACATTGAGAAAGGTGACATGAAGGGGGCATTGAAAATGAGGGACCAGATGGTAGCACACGGGTGCTTGAGTATGAATGTGACTGTTAATGTTTTAGTTAATGGGTTTTGCAAAGAGGGTAGGGTTGAAGAAGCGTTTAGTTTTATAGAAAAGATGTTGGATGAGTCGTTCTCCCCGGATCAGTTTACATTTAATACGTTGGTGAAAGGTTTGTGCAGGGTGGGGCATGTTACACACGCTTTGGAGATCATGGACATGATGCTTCAAGAGGGATTTGAACTGGATATTTTTACGTATAACTCACTAATTTCTGGATTATGTAAGTTGGGTGAAATTGAAGAGGCAGTGGAACTTCTCGATCAAATGGTTTCGAGGGATTGTTCTCTAAATACTGTCACGTATAATACTTTGATTAGCATATTGTCTAAGGAGAACCGGGTTGAAGAAGCAACTAAGCTTGCTCGTGTTTTTACTAGCAAGGGAATTTTGCCTGATGCTTGTACTGTCAATTCTCTGATTCAAGGTCTTTGCTTGAACAGTAATCATAAAGATGCTTTGGAACTATTTAAGAAGATGAAGGCGTCAGGATGCCCGCCTGATGAGTTTACTTACAGTATGTTGATTAATAGTCACTGTTTGAGAAGGAGGCTAAAAGAGGCACTAAGCCTGCTGAATGAAATGGAGTTGAGAGGATGCGCACGTAATGTGGTTATATACAACACTCTTATTGACGGGTTGTGCAAAAACAATAGAATTGTAGATGCAGAAGAGATTTTTGATCAGATGGAACTGCAGGGGATTTCCAGAAATTCAGTGACCTATAACACCCTTATCGATGGTATTTGTCAGAGTAAAAGGGTGGAGGAAGCTTCCCACCTTATGGACCAGATGATAATGGAAGGCTTGAAGCCCGACAAGTTCACCTATAATTCCATGCTCACATATTTCTGTAGGTCGGGGGATATAAAGAAGGCGGCATATATTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

525

Amino Acids

59.17

Weight (kDa)

5.47

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	157 - 196	7.8e-06	PPR repeat family
PPR_long	PF17177	170 - 262	1.5e-06	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	174 - 277	7.1e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	221 - 247	1.6e-08	PPR repeat
PPR_2	PF13041	222 - 268	2.5e-15	PPR repeat family
PPR	PF01535	222 - 250	4.6e-07	PPR repeat
TPR_24	PF23276	225 - 313	5.7e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	252 - 282	2.4e-09	PPR repeat
PPR_2	PF13041	254 - 303	2.6e-15	PPR repeat family
PPR	PF01535	257 - 287	8e-06	PPR repeat
PPR_long	PF17177	266 - 403	1.6e-09	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	268 - 387	4.1e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	278 - 336	4.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	286 - 318	2.2e-13	PPR repeat
PPR_2	PF13041	290 - 334	1e-15	PPR repeat family
PPR	PF01535	292 - 322	3.6e-10	PPR repeat
PPR_1	PF12854	321 - 348	4.9e-07	PPR repeat
PPR_2	PF13041	325 - 372	4.1e-12	PPR repeat family
PPR_3	PF13812	353 - 404	7.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	355 - 388	9.2e-09	PPR repeat
PPR_2	PF13041	359 - 407	4.9e-16	PPR repeat family
PPR	PF01535	363 - 392	4.3e-07	PPR repeat
PPR_1	PF12854	391 - 423	3.7e-11	PPR repeat
PPR	PF01535	397 - 427	2.6e-06	PPR repeat
PPR_long	PF17177	412 - 521	6.5e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	417 - 474	2.6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	425 - 458	6.5e-14	PPR repeat
PPR_2	PF13041	429 - 478	8.3e-18	PPR repeat family
PPR	PF01535	432 - 462	4.2e-08	PPR repeat
PPR_1	PF12854	461 - 492	1.9e-10	PPR repeat
PPR_2	PF13041	464 - 513	1.4e-16	PPR repeat family
PPR	PF01535	467 - 497	1.4e-06	PPR repeat
PPR_1	PF12854	496 - 520	9.2e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53700
fragaria_vesca	FvH4_6g14250
malus_domestica	MD04G1122700.v1.1 MD12G1138900.v1.1
prunus_persica	Prupe.6G250800_v2.0.a1
pyrus_communis	pycom12g13320
rosa_chinensis	RchiOBHm_Chr3g0467211
rosa_laevigata	RLG00000024519
rosa_multiflora	Rmu_sc0000962.1_g000073
rosa_roxburghii	Rroxscaffold_6G00413820
rosa_rugosa	Rorug03G0085700
rosa_samantha	Rh3AG134200 Rh3BG155500 Rh3CG155100 Rh3DG156300
rosa_wichuraiana	Rw3G012700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1282
Acc65I	GGTACC	1 cut(s)	398
AccB1I	GGYRCC	1 cut(s)	398
AccB7I	CCANNNNNTGG	1 cut(s)	1465
AccIII	TCCGGA	1 cut(s)	550
AciI	CCGC	8 cut(s)	51, 104, 191, 217, 244, 313, 1178, 1559
AclI	AACGTT	1 cut(s)	563
AclWI	GGATC	1 cut(s)	771
AcsI	RAATTY	2 cut(s)	1068, 1393
AcyI	GRCGYC	2 cut(s)	207, 1166
AfaI	GTAC	5 cut(s)	299, 400, 443, 587, 1087
AfiI	CCNNNNNNNGG	1 cut(s)	1465
AjnI	CCWGG	1 cut(s)	537
AjuI	GAANNNNNNNTTGG	2 cut(s)	438, 470
AleI	CACNNNNGTG	1 cut(s)	646
AloI	GAACNNNNNNTCC	2 cut(s)	737, 769
AluBI	AGCT	9 cut(s)	95, 116, 199, 319, 373, 393, 423, 1042, 1454
AluI	AGCT	9 cut(s)	95, 116, 199, 319, 373, 393, 423, 1042, 1454
Alw21I	GWGCWC	1 cut(s)	243
Alw26I	GTCTC	1 cut(s)	19
AlwI	GGATC	1 cut(s)	771
Aor13HI	TCCGGA	1 cut(s)	550
AoxI	GGCC	4 cut(s)	258, 270, 478, 503
ApeKI	GCWGC	4 cut(s)	193, 196, 381, 428
ApoI	RAATTY	2 cut(s)	1068, 1393
AseI	ATTAAT	1 cut(s)	1209
Asp700I	GAANNNNTTC	2 cut(s)	450, 563
Asp718I	GGTACC	1 cut(s)	398
AspLEI	GCGC	1 cut(s)	1283
AspS9I	GGNCC	4 cut(s)	258, 307, 628, 1468
AsuC2I	CCSGG	2 cut(s)	761, 1022
AsuHPI	GGTGA	8 cut(s)	37, 93, 156, 271, 611, 799, 926, 1498
AvaII	GGWCC	3 cut(s)	307, 628, 1468
BanI	GGYRCC	1 cut(s)	398
BanII	GRGCYC	1 cut(s)	493
BauI	CACGAG	1 cut(s)	1047
Bbv12I	GWGCWC	1 cut(s)	243
BbvI	GCAGC	4 cut(s)	205, 208, 368, 440
BccI	CCATC	6 cut(s)	50, 466, 501, 628, 1363, 1415
BcgI	CGANNNNNNTGC	2 cut(s)	559, 593
BciT130I	CCWGG	1 cut(s)	539
BclI	TGATCA	1 cut(s)	1363
BcnI	CCSGG	2 cut(s)	761, 1022
BcoDI	GTCTC	1 cut(s)	19
BfaI	CTAG	1 cut(s)	1059
BfmI	CTRYAG	2 cut(s)	1376, 1534
BisI	GCNGC	6 cut(s)	194, 197, 217, 382, 429, 1560
BlsI	GCNGC	6 cut(s)	195, 198, 218, 383, 430, 1561
Bme1390I	CCNGG	3 cut(s)	539, 761, 1022
Bme18I	GGWCC	3 cut(s)	307, 628, 1468
BmgT120I	GGNCC	4 cut(s)	258, 307, 628, 1468
BmiI	GGNNCC	3 cut(s)	400, 490, 629
BmrFI	CCNGG	3 cut(s)	539, 761, 1022
BmsI	GCATC	7 cut(s)	556, 834, 1069, 1126, 1163, 1268, 1336
BplI	GAGNNNNNCTC	2 cut(s)	740, 772
Bpu10I	CCTNAGC	1 cut(s)	394
BpuEI	CTTGAG	1 cut(s)	673
BpuMI	CCSGG	2 cut(s)	761, 1022
Bsa29I	ATCGAT	1 cut(s)	1419
BsaAI	YACGTR	3 cut(s)	879, 984, 1286
BsaHI	GRCGYC	2 cut(s)	207, 1166
BsaI	GGTCTC	1 cut(s)	19
BsaJI	CCNNGG	3 cut(s)	9, 538, 759
BsaWI	WCCGGW	1 cut(s)	550
BsaXI	ACNNNNNCTCC	2 cut(s)	156, 186
Bsc4I	CCNNNNNNNGG	1 cut(s)	1465
Bse1I	ACTGG	1 cut(s)	870
BseAI	TCCGGA	1 cut(s)	550
BseBI	CCWGG	1 cut(s)	539
BseCI	ATCGAT	1 cut(s)	1419
BseDI	CCNNGG	3 cut(s)	9, 538, 759
BseGI	GGATG	5 cut(s)	547, 559, 751, 1178, 1283
BseLI	CCNNNNNNNGG	1 cut(s)	1465
BseMII	CTCAG	1 cut(s)	408
BseNI	ACTGG	1 cut(s)	870
BseRI	GAGGAG	3 cut(s)	191, 317, 364
BseXI	GCAGC	4 cut(s)	205, 208, 368, 440
BseYI	CCCAGC	1 cut(s)	255
BsgI	GTGCAG	1 cut(s)	820
BshFI	GGCC	4 cut(s)	260, 272, 480, 505
BshNI	GGYRCC	1 cut(s)	398
BshVI	ATCGAT	1 cut(s)	1419
BsiHKAI	GWGCWC	1 cut(s)	243
BsiSI	CCGG	3 cut(s)	551, 761, 1021
BslFI	GGGAC	1 cut(s)	641
BslI	CCNNNNNNNGG	1 cut(s)	1465
BsmAI	GTCTC	1 cut(s)	19
BsmFI	GGGAC	1 cut(s)	641
BsnI	GGCC	4 cut(s)	260, 272, 480, 505
Bso31I	GGTCTC	1 cut(s)	19
Bsp1286I	GDGCHC	2 cut(s)	243, 493
Bsp13I	TCCGGA	1 cut(s)	550
Bsp143I	GATC	4 cut(s)	763, 831, 943, 1363
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	8 cut(s)	51, 104, 191, 217, 244, 313, 1178, 1559
BspANI	GGCC	4 cut(s)	260, 272, 480, 505
BspCNI	CTCAG	1 cut(s)	407
BspDI	ATCGAT	1 cut(s)	1419
BspEI	TCCGGA	1 cut(s)	550
BspLI	GGNNCC	3 cut(s)	400, 490, 629
BspMAI	CTGCAG	1 cut(s)	1380
BspPI	GGATC	1 cut(s)	771
BspT107I	GGYRCC	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	19
BsrI	ACTGG	1 cut(s)	870
BssECI	CCNNGG	3 cut(s)	9, 538, 759
BssMI	GATC	4 cut(s)	763, 831, 943, 1363
BssNI	GRCGYC	2 cut(s)	207, 1166
BssSI	CACGAG	1 cut(s)	1047
BssT1I	CCWWGG	1 cut(s)	9
Bst2BI	CACGAG	1 cut(s)	1047
Bst2UI	CCWGG	1 cut(s)	539
Bst4CI	ACNGT	7 cut(s)	295, 670, 979, 1090, 1124, 1199, 1220
Bst6I	CTCTTC	3 cut(s)	441, 918, 1347
BstACI	GRCGYC	2 cut(s)	207, 1166
BstBAI	YACGTR	3 cut(s)	879, 984, 1286
BstC8I	GCNNGC	7 cut(s)	55, 270, 317, 507, 1044, 1178, 1253
BstDEI	CTNAG	4 cut(s)	394, 1011, 1038, 1247
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	5 cut(s)	547, 559, 751, 1178, 1283
BstHHI	GCGC	1 cut(s)	1283
BstKTI	GATC	4 cut(s)	766, 834, 946, 1366
BstMAI	GTCTC	1 cut(s)	19
BstMBI	GATC	4 cut(s)	763, 831, 943, 1363
BstMWI	GCNNNNNNNGC	2 cut(s)	252, 390
BstNI	CCWGG	1 cut(s)	539
BstNSI	RCATGY	1 cut(s)	815
BstSCI	CCNGG	3 cut(s)	537, 759, 1020
BstSFI	CTRYAG	2 cut(s)	1376, 1534
BstSNI	TACGTA	1 cut(s)	879
BstV1I	GCAGC	4 cut(s)	205, 208, 368, 440
Bsu15I	ATCGAT	1 cut(s)	1419
BsuRI	GGCC	4 cut(s)	260, 272, 480, 505
BsuTUI	ATCGAT	1 cut(s)	1419
BtgI	CCRYGG	1 cut(s)	9
BtsCI	GGATG	5 cut(s)	547, 559, 751, 1178, 1283
BtsI	GCAGTG	1 cut(s)	936
BtsIMutI	CAGTG	4 cut(s)	291, 936, 1216, 1404
Cac8I	GCNNGC	7 cut(s)	55, 270, 317, 507, 1044, 1178, 1253
CfoI	GCGC	1 cut(s)	1283
Cfr13I	GGNCC	4 cut(s)	258, 307, 628, 1468
ClaI	ATCGAT	1 cut(s)	1419
CseI	GACGC	2 cut(s)	215, 1155
Csp6I	GTAC	5 cut(s)	298, 399, 442, 586, 1086
CviAII	CATG	6 cut(s)	10, 604, 812, 835, 841, 1519
CviQI	GTAC	5 cut(s)	298, 399, 442, 586, 1086
DdeI	CTNAG	4 cut(s)	394, 1011, 1038, 1247
DpnI	GATC	4 cut(s)	765, 833, 945, 1365
DpnII	GATC	4 cut(s)	763, 831, 943, 1363
Eam1104I	CTCTTC	3 cut(s)	441, 918, 1347
EarI	CTCTTC	3 cut(s)	441, 918, 1347
EciI	GGCGGA	2 cut(s)	40, 233
Eco105I	TACGTA	1 cut(s)	879
Eco130I	CCWWGG	1 cut(s)	9
Eco147I	AGGCCT	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	493
Eco31I	GGTCTC	1 cut(s)	19
Eco47I	GGWCC	3 cut(s)	307, 628, 1468
EcoO109I	RGGNCCY	1 cut(s)	307
EcoRII	CCWGG	1 cut(s)	537
EcoT14I	CCWWGG	1 cut(s)	9
EcoT38I	GRGCYC	1 cut(s)	493
ErhI	CCWWGG	1 cut(s)	9
FaeI	CATG	6 cut(s)	13, 607, 815, 838, 844, 1522
FalI	AAGNNNNNCTT	2 cut(s)	438, 470
FaqI	GGGAC	1 cut(s)	641
FatI	CATG	6 cut(s)	9, 603, 811, 834, 840, 1518
FauI	CCCGC	1 cut(s)	1185
FbaI	TGATCA	1 cut(s)	1363
Fnu4HI	GCNGC	6 cut(s)	194, 197, 217, 382, 429, 1560
FokI	GGATG	5 cut(s)	534, 566, 758, 1185, 1290
FriOI	GRGCYC	1 cut(s)	493
Fsp4HI	GCNGC	6 cut(s)	194, 197, 217, 382, 429, 1560
FspAI	RTGCGCAY	1 cut(s)	1282
FspBI	CTAG	1 cut(s)	1059
FspI	TGCGCA	1 cut(s)	1282
GlaI	GCGC	1 cut(s)	1282
GluI	GCNGC	6 cut(s)	194, 197, 217, 382, 429, 1560
GsaI	CCCAGC	1 cut(s)	259
HaeIII	GGCC	4 cut(s)	260, 272, 480, 505
HapII	CCGG	3 cut(s)	551, 761, 1021
HgaI	GACGC	2 cut(s)	215, 1155
HhaI	GCGC	1 cut(s)	1283
Hin1I	GRCGYC	2 cut(s)	207, 1166
Hin1II	CATG	6 cut(s)	13, 607, 815, 838, 844, 1522
Hin6I	GCGC	1 cut(s)	1281
HinP1I	GCGC	1 cut(s)	1281
HindIII	AAGCTT	4 cut(s)	317, 371, 1040, 1452
HinfI	GANTC	6 cut(s)	230, 287, 341, 451, 749, 1102
HpaII	CCGG	3 cut(s)	551, 761, 1021
HphI	GGTGA	8 cut(s)	37, 93, 156, 271, 611, 799, 926, 1498
Hpy166II	GTNNAC	5 cut(s)	298, 567, 771, 1191, 1506
Hpy188I	TCNGA	7 cut(s)	180, 420, 488, 498, 1101, 1368, 1434
Hpy188III	TCNNGA	7 cut(s)	551, 568, 851, 897, 941, 1170, 1389
Hpy8I	GTNNAC	5 cut(s)	298, 567, 771, 1191, 1506
Hpy99I	CGWCG	1 cut(s)	209
HpyAV	CCTTC	8 cut(s)	83, 318, 470, 601, 1156, 1221, 1478, 1549
HpyCH4III	ACNGT	7 cut(s)	295, 670, 979, 1090, 1124, 1199, 1220
HpyCH4IV	ACGT	5 cut(s)	563, 782, 878, 983, 1285
HpyCH4V	TGCA	8 cut(s)	428, 547, 580, 696, 801, 1326, 1349, 1378
HpyF10VI	GCNNNNNNNGC	2 cut(s)	252, 390
HpyF3I	CTNAG	4 cut(s)	394, 1011, 1038, 1247
HpySE526I	ACGT	5 cut(s)	563, 782, 878, 983, 1285
Hsp92I	GRCGYC	2 cut(s)	207, 1166
Hsp92II	CATG	6 cut(s)	13, 607, 815, 838, 844, 1522
HspAI	GCGC	1 cut(s)	1281
Kpn2I	TCCGGA	1 cut(s)	550
KpnI	GGTACC	1 cut(s)	402
Ksp22I	TGATCA	1 cut(s)	1363
Kzo9I	GATC	4 cut(s)	763, 831, 943, 1363
LmnI	GCTCC	5 cut(s)	121, 204, 246, 351, 488
Lsp1109I	GCAGC	4 cut(s)	205, 208, 368, 440
LweI	GCATC	7 cut(s)	556, 834, 1069, 1126, 1163, 1268, 1336
MaeI	CTAG	1 cut(s)	1059
MaeII	ACGT	5 cut(s)	563, 782, 878, 983, 1285
MaeIII	GTNAC	6 cut(s)	599, 664, 814, 979, 1214, 1399
MalI	GATC	4 cut(s)	765, 833, 945, 1365
MboI	GATC	4 cut(s)	763, 831, 943, 1363
MboII	GAAGA	7 cut(s)	121, 458, 725, 935, 1040, 1168, 1364
MhlI	GDGCHC	2 cut(s)	243, 493
MluCI	AATT	9 cut(s)	274, 482, 891, 918, 1068, 1093, 1338, 1393, 1513
MlyI	GAGTC	4 cut(s)	239, 281, 350, 758
MmeI	TCCRAC	1 cut(s)	723
MroI	TCCGGA	1 cut(s)	550
MroXI	GAANNNNTTC	2 cut(s)	450, 563
MseI	TTAA	6 cut(s)	672, 684, 777, 1152, 1209, 1573
MslI	CAYNNNNRTG	4 cut(s)	552, 646, 839, 1134
MspI	CCGG	3 cut(s)	551, 761, 1021
MspR9I	CCNGG	3 cut(s)	539, 761, 1022
MvaI	CCWGG	1 cut(s)	539
MwoI	GCNNNNNNNGC	2 cut(s)	252, 390
NciI	CCSGG	2 cut(s)	761, 1022
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	4 cut(s)	763, 831, 943, 1363
NlaIII	CATG	6 cut(s)	13, 607, 815, 838, 844, 1522
NlaIV	GGNNCC	3 cut(s)	400, 490, 629
NmuCI	GTSAC	5 cut(s)	599, 664, 979, 1214, 1399
NsbI	TGCGCA	1 cut(s)	1282
NspI	RCATGY	1 cut(s)	815
OliI	CACNNNNGTG	1 cut(s)	646
PceI	AGGCCT	1 cut(s)	505
PdmI	GAANNNNTTC	2 cut(s)	450, 563
PfeI	GAWTC	2 cut(s)	451, 1102
PflMI	CCANNNNNTGG	1 cut(s)	1465
PkrI	GCNGC	6 cut(s)	195, 198, 218, 383, 430, 1561
PleI	GAGTC	4 cut(s)	238, 281, 349, 757
PpsI	GAGTC	4 cut(s)	238, 281, 349, 757
Ppu21I	YACGTR	3 cut(s)	879, 984, 1286
PpuMI	RGGWCCY	1 cut(s)	307
PshBI	ATTAAT	1 cut(s)	1209
Psp1406I	AACGTT	1 cut(s)	563
Psp5II	RGGWCCY	1 cut(s)	307
Psp6I	CCWGG	1 cut(s)	537
PspFI	CCCAGC	1 cut(s)	255
PspGI	CCWGG	1 cut(s)	537
PspN4I	GGNNCC	3 cut(s)	400, 490, 629
PspPI	GGNCC	4 cut(s)	258, 307, 628, 1468
PspPPI	RGGWCCY	1 cut(s)	307
PstI	CTGCAG	1 cut(s)	1380
RsaI	GTAC	5 cut(s)	299, 400, 443, 587, 1087
RsaNI	GTAC	5 cut(s)	298, 399, 442, 586, 1086
RseI	CAYNNNNRTG	4 cut(s)	552, 646, 839, 1134
SaqAI	TTAA	6 cut(s)	672, 684, 777, 1152, 1209, 1573
SatI	GCNGC	6 cut(s)	194, 197, 217, 382, 429, 1560
Sau3AI	GATC	4 cut(s)	763, 831, 943, 1363
Sau96I	GGNCC	4 cut(s)	258, 307, 628, 1468
SchI	GAGTC	4 cut(s)	239, 281, 350, 758
ScrFI	CCNGG	3 cut(s)	539, 761, 1022
SduI	GDGCHC	2 cut(s)	243, 493
SfaNI	GCATC	7 cut(s)	556, 834, 1069, 1126, 1163, 1268, 1336
SfcI	CTRYAG	2 cut(s)	1376, 1534
SinI	GGWCC	3 cut(s)	307, 628, 1468
SmiMI	CAYNNNNRTG	4 cut(s)	552, 646, 839, 1134
SmlI	CTYRAG	1 cut(s)	652
SmoI	CTYRAG	1 cut(s)	652
SnaBI	TACGTA	1 cut(s)	879
Sse9I	AATT	9 cut(s)	274, 482, 891, 918, 1068, 1093, 1338, 1393, 1513
SseBI	AGGCCT	1 cut(s)	505
SsiI	CCGC	8 cut(s)	51, 104, 191, 217, 244, 313, 1178, 1559
SspMI	CTAG	1 cut(s)	1059
StuI	AGGCCT	1 cut(s)	505
StyD4I	CCNGG	3 cut(s)	537, 759, 1020
StyI	CCWWGG	1 cut(s)	9
TaaI	ACNGT	7 cut(s)	295, 670, 979, 1090, 1124, 1199, 1220
TaiI	ACGT	5 cut(s)	566, 785, 881, 986, 1288
TaqI	TCGA	8 cut(s)	204, 339, 344, 386, 533, 942, 956, 1419
TasI	AATT	9 cut(s)	274, 482, 891, 918, 1068, 1093, 1338, 1393, 1513
TatI	WGTACW	1 cut(s)	1085
TauI	GCSGC	2 cut(s)	219, 1562
TfiI	GAWTC	2 cut(s)	451, 1102
Tru1I	TTAA	6 cut(s)	672, 684, 777, 1152, 1209, 1573
Tru9I	TTAA	6 cut(s)	672, 684, 777, 1152, 1209, 1573
TscAI	CASTG	4 cut(s)	298, 936, 1223, 1404
TseFI	GTSAC	5 cut(s)	599, 664, 979, 1214, 1399
TseI	GCWGC	4 cut(s)	193, 196, 381, 428
Tsp45I	GTSAC	5 cut(s)	599, 664, 979, 1214, 1399
TspDTI	ATGAA	5 cut(s)	383, 620, 674, 1175, 1275
TspRI	CASTG	4 cut(s)	298, 936, 1223, 1404
Van91I	CCANNNNNTGG	1 cut(s)	1465
VpaK11BI	GGWCC	3 cut(s)	307, 628, 1468
VspI	ATTAAT	1 cut(s)	1209
XapI	RAATTY	2 cut(s)	1068, 1393
XceI	RCATGY	1 cut(s)	815
XmnI	GAANNNNTTC	2 cut(s)	450, 563
XspI	CTAG	1 cut(s)	1059

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.