Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0012100

Physical Location & Seq

Genomic Coordinates Forward (+)

22874680 .. 22886004

Gene Structure 11325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1140300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGCTGTTGAAGAAGGTGTCGAGCAGGTAGTCGCGCCGCCGCAGAAGGCGAAGGAGCCTTCCGAAGATGAGAAGCGGAGGAAGAAGATAGCGGCCGGAGCCTTGATGAAAGCGGTGATGAGGCCCGGTGGAGGCGATTCGACACCTTCAGATGGTTATCAGGTTGTATATCATTCCACTGTTAGAACATTGGACGGAGTCATTGTTGAATCGTCCCGATCGGAATATGGAGGCAAGGGCACTCCTATACGACATGTTTTGGGAAAGAGCAAGATCATAGTGGGATTACTCGAAGGAATTCCAACAATGCTGAAGGGTGAAGTTGCGATGTTCAAAATGAAACCTCAAGTGCACTATGGTGAGGAAGATTGCCCTGTTTCAGCACCCAGCGGCTTTCCCAAGGATGATGAACTTCATTTTGAAATTGAGATGATCGATTTCTTTAAAGCCAAGGTCGTTAGTGATGACTTGGGAGTGGTAAAGAAGGTAATAACTGAAGGTCAGGGTTGGGAATCGCCAAGGGAACCTTATGAAGTAAAAGCCTGGATTTCAGCAAAGACAGGTGATGGAAAAGTGCTTGTTTCATGTACTCAAGGAGAGCCATTTTTCTTTAATTTTGGAAAGTCAGAGGTGACATCGCTCTTAGCTGTACCTAAGGGTCTTGAGATGGGAATTGGTACAATGACACGGAAAGAGAAGGCAATAATATATGTGACCAAGCAGTACTTAACTCCATCTCCTTTCCTTCCTGTGGTAGAAGGTGTTGAGGAAGTTCATTTTGAAGTGGAGCTTGCCCACTTTATTCAGGTGCGTGACATGCTTGGTGATGGGCGCCTGATAAAACGTCGTATTCATGATGGAAAAGGTGAGTTTCCTATGGATTGCCCTCTTCATGACAGCCTACTACGTGTCCATTATAAGGGTATGCTTCTTAATGAGGAAAAGACAATCTTCTATGATACAAGAGTTGATAACGATGGTCAACCTTTGGAGTTTTGTTCTGGAGAAGGCCTTGTGCCCGAGGGATTTGAAATGTGTGTTCGTTTGATGCTGCCTGAAGAGAGAGCTCTCGTCACATGCCCTCCTGATTATGCATACGACAAATTTCCTAGGCCTGCTAATGTTCCTGAAGGTGCTCATATTCAATGGGAAATTGAACTTCTTGGGTTTGAGATGCCAAAGGATTGGACTGGTTTAAATTTTCAAAGCATAATGGATGAAGCAGAGAAGATTAGAAACACGGGGAACAGGCTATTCAAAGAAGGAAAATTTGAACTTGCTAAGGCAAAGTATGACAAGGTGCTTCGGGAATTTAATCATGTTAATCCACAAGATGATGAAGAGGGGAAAATATTTGCCAATACAAGGAATCTGTTACATCTGAATGTCGCCGCATGCTTCCTGAAGATGGGAGAATGCAGAAAATCCATCGAGACATGCAACAAGGTTTTAGAAGCAAACCCTGGACACGTCAAGGCTCTTTACCGTCGAGGTATGGCCTACATGACTCTTGGAGATTTCGAGGAAGCAAAGAGTGACTTCAACAAGATGATTAAACTAGACAAGTCAACTGAAGCTGATGCTACAGCTGCTCTTCAAAAAGTTAAGCAGAAAGAACAGGAAGTTGAGAAGAAGGTGCGGAAACAATTCAAGGGGCTATTTGACAAGAAGCCAGGGGAAATTGCAGAGGCTGGAACTGAAGATGGAGATCAGCCTGCAGTTGAGAACCCCAAGAATGATGATAGGGAGGATTCCGACGGAGATAATTCAGACGAATCTCATGAAACTGCAGAGGATGTACCTAGATCGTCCTGGTTGTCTTTTTTGTGGCCTAAACGACTACTTGCAGCTCTTGGGCGGCCAGGATGTACGATTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000038 GO:0000413 GO:0000902 GO:0003006 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006457 GO:0006464 GO:0006629 GO:0006631 GO:0006633 GO:0006807 GO:0007163 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009880 GO:0009987 GO:0010033 GO:0010154 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0019752 GO:0022414 GO:0022622 GO:0030010 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042761 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0061077 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0090696 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_6 TPR_8

Protein Analysis

627

Amino Acids

70.11

Weight (kDa)

5.41

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	46 - 144	4.8e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	300 - 388	5.2e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_1	PF00515	491 - 522	1.2e-07	Tetratricopeptide repeat
TPR_2	PF07719	492 - 522	1.1e-06	Tetratricopeptide repeat
TPR_8	PF13181	492 - 523	1e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54010 AT3G54010
fragaria_vesca	FvH4_6g12640 FvH4_6g12640 FvH4_6g12640
malus_domestica	MD04G1140300.v1.1 MD12G1155600.v1.1
prunus_persica	Prupe.6G265400_v2.0.a1
pyrus_communis	pycom04g12790 pycom12g14770
rosa_chinensis	RchiOBHm_Chr3g0464491
rosa_laevigata	RLG00000024692
rosa_multiflora	Rmu_sc0003074.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415620
rosa_rugosa	Rorug03G0072600
rosa_samantha	Rh3BG134800 Rh3CG137300 Rh3DG136100
rosa_wichuraiana	Rw3G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	918
Acc36I	ACCTGC	1 cut(s)	16
AccB1I	GGYRCC	1 cut(s)	831
AccII	CGCG	1 cut(s)	35
AciI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1392, 1639, 1858
AcoI	YGGCCR	2 cut(s)	93, 1859
AcsI	RAATTY	5 cut(s)	297, 1103, 1198, 1268, 1310
AcuI	CTGAAG	8 cut(s)	132, 332, 516, 1077, 1149, 1424, 1593, 1719
AcyI	GRCGYC	1 cut(s)	832
AfaI	GTAC	6 cut(s)	589, 651, 679, 725, 1800, 1870
AfiI	CCNNNNNNNGG	6 cut(s)	131, 152, 751, 919, 1365, 1408
AflIII	ACRYGT	3 cut(s)	253, 907, 1468
AjiI	CACGTC	1 cut(s)	1471
AjnI	CCWGG	5 cut(s)	542, 1462, 1672, 1811, 1861
AleI	CACNNNNGTG	1 cut(s)	357
AluBI	AGCT	6 cut(s)	647, 790, 1067, 1577, 1589, 1850
AluI	AGCT	6 cut(s)	647, 790, 1067, 1577, 1589, 1850
Alw21I	GWGCWC	3 cut(s)	354, 1069, 1138
Alw26I	GTCTC	1 cut(s)	1427
Alw44I	GTGCAC	1 cut(s)	350
AlwNI	CAGNNNCTG	1 cut(s)	1691
Ama87I	CYCGRG	1 cut(s)	1019
AoxI	GGCC	7 cut(s)	93, 122, 1009, 1112, 1497, 1829, 1859
ApaLI	GTGCAC	1 cut(s)	350
ApeKI	GCWGC	3 cut(s)	1051, 1589, 1847
ApoI	RAATTY	5 cut(s)	297, 1103, 1198, 1268, 1310
Asp700I	GAANNNNTTC	2 cut(s)	297, 1646
AspA2I	CCTAGG	1 cut(s)	1109
AspLEI	GCGC	2 cut(s)	37, 834
AspS9I	GGNCC	1 cut(s)	123
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	7 cut(s)	127, 329, 371, 575, 643, 836, 878
AvaI	CYCGRG	1 cut(s)	1019
AvrII	CCTAGG	1 cut(s)	1109
AxyI	CCTNAGG	1 cut(s)	654
BaeGI	GKGCMC	3 cut(s)	242, 354, 1020
BaeI	ACNNNNGTAYC	2 cut(s)	951, 984
BanI	GGYRCC	1 cut(s)	831
BanII	GRGCYC	1 cut(s)	1069
Bbv12I	GWGCWC	3 cut(s)	354, 1069, 1138
BbvI	GCAGC	3 cut(s)	1038, 1576, 1859
BciT130I	CCWGG	5 cut(s)	544, 1464, 1674, 1813, 1863
BcnI	CCSGG	1 cut(s)	126
BcoDI	GTCTC	1 cut(s)	1427
BfaI	CTAG	3 cut(s)	1110, 1559, 1803
BfmI	CTRYAG	3 cut(s)	1584, 1716, 1788
BfoI	RGCGCY	1 cut(s)	835
BfuAI	ACCTGC	1 cut(s)	16
BisI	GCNGC	9 cut(s)	38, 41, 93, 391, 1052, 1392, 1590, 1848, 1859
BlnI	CCTAGG	1 cut(s)	1109
BlsI	GCNGC	9 cut(s)	39, 42, 94, 392, 1053, 1393, 1591, 1849, 1860
BmcAI	AGTACT	1 cut(s)	725
Bme1390I	CCNGG	6 cut(s)	126, 544, 1464, 1674, 1813, 1863
BmeT110I	CYCGRG	1 cut(s)	1019
BmgBI	CACGTC	1 cut(s)	1471
BmgT120I	GGNCC	1 cut(s)	123
BmiI	GGNNCC	4 cut(s)	57, 100, 525, 833
BmrFI	CCNGG	6 cut(s)	126, 544, 1464, 1674, 1813, 1863
BmsI	GCATC	3 cut(s)	1038, 1164, 1570
BpmI	CTGGAG	1 cut(s)	1023
Bpu10I	CCTNAGC	1 cut(s)	1281
BpuEI	CTTGAG	3 cut(s)	330, 576, 683
BpuMI	CCSGG	1 cut(s)	126
Bsa29I	ATCGAT	1 cut(s)	435
BsaAI	YACGTR	1 cut(s)	908
BsaBI	GATNNNNATC	2 cut(s)	156, 1707
BsaHI	GRCGYC	1 cut(s)	832
BsaJI	CCNNGG	7 cut(s)	399, 450, 518, 1020, 1109, 1462, 1673
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 721, 751, 1066, 1096
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 152, 751, 919, 1365, 1408
Bse1I	ACTGG	1 cut(s)	1195
Bse21I	CCTNAGG	1 cut(s)	654
Bse8I	GATNNNNATC	2 cut(s)	156, 1707
BseBI	CCWGG	5 cut(s)	544, 1464, 1674, 1813, 1863
BseCI	ATCGAT	1 cut(s)	435
BseDI	CCNNGG	7 cut(s)	399, 450, 518, 1020, 1109, 1462, 1673
BseGI	GGATG	4 cut(s)	409, 1222, 1801, 1871
BseJI	GATNNNNATC	2 cut(s)	156, 1707
BseLI	CCNNNNNNNGG	6 cut(s)	131, 152, 751, 919, 1365, 1408
BseNI	ACTGG	1 cut(s)	1195
BseSI	GKGCMC	3 cut(s)	242, 354, 1020
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	3 cut(s)	1038, 1576, 1859
BseYI	CCCAGC	1 cut(s)	386
Bsh1236I	CGCG	1 cut(s)	35
Bsh1285I	CGRYCG	2 cut(s)	96, 221
BshFI	GGCC	7 cut(s)	95, 124, 1011, 1114, 1499, 1831, 1861
BshNI	GGYRCC	1 cut(s)	831
BshVI	ATCGAT	1 cut(s)	435
BsiEI	CGRYCG	2 cut(s)	96, 221
BsiHKAI	GWGCWC	3 cut(s)	354, 1069, 1138
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	2 cut(s)	96, 126
BslFI	GGGAC	1 cut(s)	199
BslI	CCNNNNNNNGG	6 cut(s)	131, 152, 751, 919, 1365, 1408
BsmAI	GTCTC	1 cut(s)	1427
BsmFI	GGGAC	1 cut(s)	199
BsmI	GAATGC	1 cut(s)	1421
BsnI	GGCC	7 cut(s)	95, 124, 1011, 1114, 1499, 1831, 1861
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	5 cut(s)	242, 354, 1020, 1069, 1138
Bsp143I	GATC	5 cut(s)	218, 273, 432, 1708, 1805
BspACI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1392, 1639, 1858
BspANI	GGCC	7 cut(s)	95, 124, 1011, 1114, 1499, 1831, 1861
BspDI	ATCGAT	1 cut(s)	435
BspFNI	CGCG	1 cut(s)	35
BspHI	TCATGA	3 cut(s)	853, 892, 1780
BspLI	GGNNCC	4 cut(s)	57, 100, 525, 833
BspMAI	CTGCAG	2 cut(s)	1720, 1792
BspMI	ACCTGC	1 cut(s)	16
BspQI	GCTCTTC	1 cut(s)	1599
BspT107I	GGYRCC	1 cut(s)	831
BsrI	ACTGG	1 cut(s)	1195
BssECI	CCNNGG	7 cut(s)	399, 450, 518, 1020, 1109, 1462, 1673
BssMI	GATC	5 cut(s)	218, 273, 432, 1708, 1805
BssNI	GRCGYC	1 cut(s)	832
BssT1I	CCWWGG	4 cut(s)	399, 450, 518, 1109
Bst2UI	CCWGG	5 cut(s)	544, 1464, 1674, 1813, 1863
Bst4CI	ACNGT	2 cut(s)	181, 1487
Bst6I	CTCTTC	4 cut(s)	894, 1053, 1335, 1599
BstACI	GRCGYC	1 cut(s)	832
BstBAI	YACGTR	1 cut(s)	908
BstC8I	GCNNGC	4 cut(s)	792, 1116, 1396, 1716
BstDEI	CTNAG	3 cut(s)	643, 654, 1281
BstF5I	GGATG	4 cut(s)	409, 1222, 1801, 1871
BstFNI	CGCG	1 cut(s)	35
BstH2I	RGCGCY	1 cut(s)	835
BstHHI	GCGC	2 cut(s)	37, 834
BstKTI	GATC	5 cut(s)	221, 276, 435, 1711, 1808
BstMAI	GTCTC	1 cut(s)	1427
BstMBI	GATC	5 cut(s)	218, 273, 432, 1708, 1805
BstMCI	CGRYCG	2 cut(s)	96, 221
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 817, 1589
BstNI	CCWGG	5 cut(s)	544, 1464, 1674, 1813, 1863
BstNSI	RCATGY	5 cut(s)	257, 820, 1080, 1398, 1440
BstSCI	CCNGG	6 cut(s)	124, 542, 1462, 1672, 1811, 1861
BstSFI	CTRYAG	3 cut(s)	1584, 1716, 1788
BstSLI	GKGCMC	3 cut(s)	242, 354, 1020
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	3 cut(s)	1038, 1576, 1859
BstXI	CCANNNNNNTGG	1 cut(s)	1185
BstZI	CGGCCG	1 cut(s)	93
Bsu15I	ATCGAT	1 cut(s)	435
Bsu36I	CCTNAGG	1 cut(s)	654
BsuRI	GGCC	7 cut(s)	95, 124, 1011, 1114, 1499, 1831, 1861
BsuTUI	ATCGAT	1 cut(s)	435
BtgZI	GCGATG	2 cut(s)	341, 621
BtrI	CACGTC	1 cut(s)	1471
BtsCI	GGATG	4 cut(s)	409, 1222, 1801, 1871
BtsIMutI	CAGTG	1 cut(s)	177
BveI	ACCTGC	1 cut(s)	16
Cac8I	GCNNGC	4 cut(s)	792, 1116, 1396, 1716
CaiI	CAGNNNCTG	1 cut(s)	1691
CciI	TCATGA	3 cut(s)	853, 892, 1780
CfoI	GCGC	2 cut(s)	37, 834
Cfr13I	GGNCC	1 cut(s)	123
ClaI	ATCGAT	1 cut(s)	435
Csp6I	GTAC	6 cut(s)	588, 650, 678, 724, 1799, 1869
CviQI	GTAC	6 cut(s)	588, 650, 678, 724, 1799, 1869
DdeI	CTNAG	3 cut(s)	643, 654, 1281
DinI	GGCGCC	1 cut(s)	833
DpnI	GATC	5 cut(s)	220, 275, 434, 1710, 1807
DpnII	GATC	5 cut(s)	218, 273, 432, 1708, 1805
DraI	TTTAAA	2 cut(s)	445, 1197
EaeI	YGGCCR	2 cut(s)	93, 1859
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	4 cut(s)	894, 1053, 1335, 1599
EarI	CTCTTC	4 cut(s)	894, 1053, 1335, 1599
Ecl136II	GAGCTC	1 cut(s)	1067
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	4 cut(s)	399, 450, 518, 1109
Eco147I	AGGCCT	2 cut(s)	1011, 1114
Eco24I	GRGCYC	1 cut(s)	1069
Eco52I	CGGCCG	1 cut(s)	93
Eco53kI	GAGCTC	1 cut(s)	1067
Eco57I	CTGAAG	8 cut(s)	132, 332, 516, 1077, 1149, 1424, 1593, 1719
Eco81I	CCTNAGG	1 cut(s)	654
Eco88I	CYCGRG	1 cut(s)	1019
EcoICRI	GAGCTC	1 cut(s)	1067
EcoRI	GAATTC	1 cut(s)	297
EcoRII	CCWGG	5 cut(s)	542, 1462, 1672, 1811, 1861
EcoT14I	CCWWGG	4 cut(s)	399, 450, 518, 1109
EcoT22I	ATGCAT	1 cut(s)	1096
EcoT38I	GRGCYC	1 cut(s)	1069
EgeI	GGCGCC	1 cut(s)	833
EheI	GGCGCC	1 cut(s)	833
ErhI	CCWWGG	4 cut(s)	399, 450, 518, 1109
FaqI	GGGAC	1 cut(s)	199
Fnu4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1052, 1392, 1590, 1848, 1859
FokI	GGATG	3 cut(s)	416, 1229, 1808
FriOI	GRGCYC	1 cut(s)	1069
Fsp4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1052, 1392, 1590, 1848, 1859
FspBI	CTAG	3 cut(s)	1110, 1559, 1803
GlaI	GCGC	2 cut(s)	36, 833
GluI	GCNGC	9 cut(s)	38, 41, 93, 391, 1052, 1392, 1590, 1848, 1859
GsaI	CCCAGC	1 cut(s)	390
GsuI	CTGGAG	1 cut(s)	1023
HaeII	RGCGCY	1 cut(s)	835
HaeIII	GGCC	7 cut(s)	95, 124, 1011, 1114, 1499, 1831, 1861
HapII	CCGG	2 cut(s)	96, 126
HhaI	GCGC	2 cut(s)	37, 834
Hin1I	GRCGYC	1 cut(s)	832
Hin6I	GCGC	2 cut(s)	35, 832
HinP1I	GCGC	2 cut(s)	35, 832
HincII	GTYRAC	2 cut(s)	983, 1569
HindII	GTYRAC	2 cut(s)	983, 1569
HinfI	GANTC	8 cut(s)	137, 198, 209, 512, 1369, 1507, 1751, 1775
HpaII	CCGG	2 cut(s)	96, 126
HphI	GGTGA	7 cut(s)	127, 329, 371, 575, 643, 836, 878
Hpy166II	GTNNAC	3 cut(s)	352, 983, 1569
Hpy188I	TCNGA	7 cut(s)	64, 151, 223, 628, 1383, 1756, 1771
Hpy8I	GTNNAC	3 cut(s)	352, 983, 1569
Hpy99I	CGWCG	3 cut(s)	849, 1491, 1760
HpyCH4III	ACNGT	2 cut(s)	181, 1487
HpyCH4IV	ACGT	3 cut(s)	844, 907, 1470
HpyCH4V	TGCA	8 cut(s)	352, 1094, 1419, 1440, 1685, 1718, 1790, 1847
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 817, 1589
HpyF3I	CTNAG	3 cut(s)	643, 654, 1281
HpySE526I	ACGT	3 cut(s)	844, 907, 1470
Hsp92I	GRCGYC	1 cut(s)	832
HspAI	GCGC	2 cut(s)	35, 832
KasI	GGCGCC	1 cut(s)	831
Kzo9I	GATC	5 cut(s)	218, 273, 432, 1708, 1805
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	3 cut(s)	55, 98, 787
Lsp1109I	GCAGC	3 cut(s)	1038, 1576, 1859
LweI	GCATC	3 cut(s)	1038, 1164, 1570
MaeI	CTAG	3 cut(s)	1110, 1559, 1803
MaeII	ACGT	3 cut(s)	844, 907, 1470
MaeIII	GTNAC	6 cut(s)	631, 712, 812, 1072, 1374, 1535
MalI	GATC	5 cut(s)	220, 275, 434, 1710, 1807
MboI	GATC	5 cut(s)	218, 273, 432, 1708, 1805
MhlI	GDGCHC	5 cut(s)	242, 354, 1020, 1069, 1138
Mly113I	GGCGCC	1 cut(s)	832
MlyI	GAGTC	2 cut(s)	207, 1501
MmeI	TCCRAC	2 cut(s)	326, 1779
Mph1103I	ATGCAT	1 cut(s)	1096
MroXI	GAANNNNTTC	2 cut(s)	297, 1646
MseI	TTAA	9 cut(s)	444, 612, 728, 933, 1196, 1314, 1323, 1554, 1605
MslI	CAYNNNNRTG	2 cut(s)	357, 1383
MspA1I	CMGCKG	2 cut(s)	390, 1589
MspI	CCGG	2 cut(s)	96, 126
MspR9I	CCNGG	6 cut(s)	126, 544, 1464, 1674, 1813, 1863
Mva1269I	GAATGC	1 cut(s)	1421
MvaI	CCWGG	5 cut(s)	544, 1464, 1674, 1813, 1863
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	3 cut(s)	98, 817, 1589
NarI	GGCGCC	1 cut(s)	832
NciI	CCSGG	1 cut(s)	126
NdeII	GATC	5 cut(s)	218, 273, 432, 1708, 1805
NlaIV	GGNNCC	4 cut(s)	57, 100, 525, 833
NmuCI	GTSAC	5 cut(s)	631, 712, 812, 1072, 1535
NsiI	ATGCAT	1 cut(s)	1096
NspI	RCATGY	5 cut(s)	257, 820, 1080, 1398, 1440
OliI	CACNNNNGTG	1 cut(s)	357
PaeI	GCATGC	1 cut(s)	1398
PagI	TCATGA	3 cut(s)	853, 892, 1780
PceI	AGGCCT	2 cut(s)	1011, 1114
PciI	ACATGT	1 cut(s)	253
PciSI	GCTCTTC	1 cut(s)	1599
PctI	GAATGC	1 cut(s)	1421
PdmI	GAANNNNTTC	2 cut(s)	297, 1646
PfeI	GAWTC	6 cut(s)	137, 209, 512, 1369, 1751, 1775
PflFI	GACNNNGTC	1 cut(s)	197
PkrI	GCNGC	9 cut(s)	39, 42, 94, 392, 1053, 1393, 1591, 1849, 1860
Ple19I	CGATCG	1 cut(s)	221
PleI	GAGTC	2 cut(s)	206, 1501
PluTI	GGCGCC	1 cut(s)	835
PpsI	GAGTC	2 cut(s)	206, 1501
Ppu21I	YACGTR	1 cut(s)	908
PscI	ACATGT	1 cut(s)	253
PsiI	TTATAA	1 cut(s)	918
Psp124BI	GAGCTC	1 cut(s)	1069
Psp6I	CCWGG	5 cut(s)	542, 1462, 1672, 1811, 1861
PspFI	CCCAGC	1 cut(s)	386
PspGI	CCWGG	5 cut(s)	542, 1462, 1672, 1811, 1861
PspN4I	GGNNCC	4 cut(s)	57, 100, 525, 833
PspPI	GGNCC	1 cut(s)	123
PstI	CTGCAG	2 cut(s)	1720, 1792
PstNI	CAGNNNCTG	1 cut(s)	1691
PsyI	GACNNNGTC	1 cut(s)	197
PvuI	CGATCG	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1589
RsaI	GTAC	6 cut(s)	589, 651, 679, 725, 1800, 1870
RsaNI	GTAC	6 cut(s)	588, 650, 678, 724, 1799, 1869
RseI	CAYNNNNRTG	2 cut(s)	357, 1383
SacI	GAGCTC	1 cut(s)	1069
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	9 cut(s)	444, 612, 728, 933, 1196, 1314, 1323, 1554, 1605
SatI	GCNGC	9 cut(s)	38, 41, 93, 391, 1052, 1392, 1590, 1848, 1859
Sau3AI	GATC	5 cut(s)	218, 273, 432, 1708, 1805
Sau96I	GGNCC	1 cut(s)	123
ScaI	AGTACT	1 cut(s)	725
SchI	GAGTC	2 cut(s)	207, 1501
ScrFI	CCNGG	6 cut(s)	126, 544, 1464, 1674, 1813, 1863
SduI	GDGCHC	5 cut(s)	242, 354, 1020, 1069, 1138
SfaNI	GCATC	3 cut(s)	1038, 1164, 1570
SfcI	CTRYAG	3 cut(s)	1584, 1716, 1788
SfoI	GGCGCC	1 cut(s)	833
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1383
SmlI	CTYRAG	3 cut(s)	345, 591, 662
SmoI	CTYRAG	3 cut(s)	345, 591, 662
SphI	GCATGC	1 cut(s)	1398
SseBI	AGGCCT	2 cut(s)	1011, 1114
SsiI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1392, 1639, 1858
SspDI	GGCGCC	1 cut(s)	831
SspI	AATATT	1 cut(s)	1353
SspMI	CTAG	3 cut(s)	1110, 1559, 1803
SstI	GAGCTC	1 cut(s)	1069
StuI	AGGCCT	2 cut(s)	1011, 1114
StyD4I	CCNGG	6 cut(s)	124, 542, 1462, 1672, 1811, 1861
StyI	CCWWGG	4 cut(s)	399, 450, 518, 1109
TaaI	ACNGT	2 cut(s)	181, 1487
TaiI	ACGT	3 cut(s)	847, 910, 1473
TaqI	TCGA	7 cut(s)	21, 140, 291, 435, 1431, 1489, 1521
TatI	WGTACW	2 cut(s)	587, 723
TauI	GCSGC	6 cut(s)	40, 43, 95, 393, 1394, 1861
TfiI	GAWTC	6 cut(s)	137, 209, 512, 1369, 1751, 1775
Tru1I	TTAA	9 cut(s)	444, 612, 728, 933, 1196, 1314, 1323, 1554, 1605
Tru9I	TTAA	9 cut(s)	444, 612, 728, 933, 1196, 1314, 1323, 1554, 1605
TscAI	CASTG	1 cut(s)	184
TseFI	GTSAC	5 cut(s)	631, 712, 812, 1072, 1535
TseI	GCWGC	3 cut(s)	1051, 1589, 1847
Tsp45I	GTSAC	5 cut(s)	631, 712, 812, 1072, 1535
TspGWI	ACGGA	3 cut(s)	210, 703, 1773
TspRI	CASTG	1 cut(s)	184
Tth111I	GACNNNGTC	1 cut(s)	197
VneI	GTGCAC	1 cut(s)	350
XapI	RAATTY	5 cut(s)	297, 1103, 1198, 1268, 1310
XceI	RCATGY	5 cut(s)	257, 820, 1080, 1398, 1440
XmaJI	CCTAGG	1 cut(s)	1109
XmnI	GAANNNNTTC	2 cut(s)	297, 1646
XspI	CTAG	3 cut(s)	1110, 1559, 1803
ZrmI	AGTACT	1 cut(s)	725
Zsp2I	ATGCAT	1 cut(s)	1096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.