Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0012100

Physical Location & Seq

Genomic Coordinates Reverse (-)

11400214 .. 11408494

Gene Structure 8281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG134800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGGGGTGGTGGCGTGGTTGTCAACCACGTCGCGAGGGGGAATGCAACGCCGTTTCAATAATATCACATGGCGCGCACTGCTGCTATAGGTTCGGGGGGCACGCGCCAGAGACGCGGCTGGGGATCGCTTTGGCAGAGTGGTGGAGGAGGTGCGTGAGTGGGGGCAAGGGAATCCCCATACGAAGTGTTTTGGGAAAGACCAAGATGATAGTTGGATTTCTAGAAGGACTTCCAACCATGCCCAAGGGTGAAATTGCAATGTTAAAAATGAAACCTCAAGTGCACTATGGTGAGGATGATTGCCCACTTTCAGCTCCCAGTGACTTTCCAAAGGATGATGAACTTCATTTTGAGATTGAGATGATAGATTTCTTCAAAGCCAAGATTGTTAGTGATGACTTGGGAGTTGTGAAGAAGGTAATAACTGAAGGTCAGGGTTGGGAATCCCCAAGGGAACCTTATGAAGTAAAAGCCTGGATTTCTGCAAAGACTGGTGATGGGAAAGTGCTTGTTCCACGTACTCAAGGAGAACCGTTTTTCTTTAATTTTGGAAAGTCTGAGATACCTAAAGGTCTTGAGATGGGAATTGGTACAATGTCACGGCAAGAGAAGGCAGTGATATATGTCAGCAGTCAGTATTTGACTCCATCTCCTTTCCTGCCTGTGGTAGAAGGTGTTGAAGAAGTTCATTTTGAAGTGGAGCTTGTCCACTTTATTCAGGTGCGAGACATGCTTGGAGATGGGCGTCTGATTAAAAGGCGTATTCGTGATGGGAAAGGTGAGTTTCCTATGGATTGTCCTCTTCACGACAGCCTTCTACGAGTCCATTACAAGGGCATGATTCTTAATGAGGAAAAGACAATCTTCTTTGATACGAGAGTTAACAATAATGGTCAGCCTTTGGAGTTCTGTTCTGGAGAAGGCCTTGTGCCTGAGGGATTTGAAATGTGTGTTCGTTTGATGCTGCCTGGAGAGATAGCTCTGGTCACATGTCCTCCTGATTATGCATACGACAAGTTTGCTAGGCCTGCTAATGTTCCTGAAGGAGCTCATATTCAATGGGAAATCGAGCTTCTTGGTTTTGAAATGCCAAAGGATTGGACTGGTTTGGACTTTACAAGCATAATAGATGAAGCAGAGAAGATAAGAAATACAGGGAACAGGCTATTTAAAGAAGGAAAATTTGAACTTGCCAAGGCAAAGTATGACAAGGTGCTTCGGGAATTTAATCACGTTAATCCACAAGATGATGAAGAAGGGAAAACATTTTCAAACACGAGGAATTTGCTACATCTGAATGTGGCTGCATGCTACTTTAAAATGGGAGAATGCAGAAAATCCATTGAGACATGCAACAAGGTTATAGAGGCAAACCCTGGACATGTTAAGGCTCTCTACCGCCGTGGAATGGCCTTCATGGCTGCTGGAGATTTTGAGGAAGCAAAGAGTGACTTCAACAAGATGATACAACTTGACAAGTCAACGGAACCAGACGCAACAGCTGCTCTTCTAAAAGTGAAGCAGCAGGAACAGGAAGTTGAGAAGAGGCAACGGAAACAATTCAAGGGACTATTTGATAAGAAGCCGGGGGAAATTTCCGAGGTTGGAACCGAAGAAGATGGAGATAAGACTGCGGATGTAAATCAGAAGAATGATGATCAAGAGGAGGATTTAGATGGAGATACTTCAGAAACCTCTCGTGAAGTTGCGGGGAATGCAGCTCAAACATCAGCCCCCCAAACCACATTCTGGCCCAGATTACTTAGAGTCCTTGGACGGGTAGGATGGACCAACATGCTTTTCAATGTCACATTCCTCTTTGTTCTGGCCTATTTGCTGAACCTGTGGTTTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000038 GO:0000413 GO:0000902 GO:0003006 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006457 GO:0006464 GO:0006629 GO:0006631 GO:0006633 GO:0006807 GO:0007163 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009880 GO:0009987 GO:0010033 GO:0010154 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0019752 GO:0022414 GO:0022622 GO:0030010 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042761 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0061077 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0090696 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_6 TPR_8

Protein Analysis

618

Amino Acids

69.91

Weight (kDa)

5.49

Isoelectric Point (pI)

41.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	56 - 121	6.2e-10	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	148 - 236	2.3e-06	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	271 - 359	2e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_1	PF00515	462 - 493	2.5e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54010 AT3G54010
fragaria_vesca	FvH4_6g12640 FvH4_6g12640 FvH4_6g12640
malus_domestica	MD04G1140300.v1.1 MD12G1155600.v1.1
prunus_persica	Prupe.6G265400_v2.0.a1
pyrus_communis	pycom04g12790 pycom12g14770
rosa_chinensis	RchiOBHm_Chr3g0464491
rosa_laevigata	RLG00000024692
rosa_multiflora	Rmu_sc0003074.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415620
rosa_rugosa	Rorug03G0072600
rosa_samantha	Rh3BG134800 Rh3CG137300 Rh3DG136100
rosa_wichuraiana	Rw3G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1749
AccII	CGCG	4 cut(s)	33, 74, 104, 115
AciI	CCGC	4 cut(s)	115, 1399, 1634, 1709
AclWI	GGATC	1 cut(s)	131
AcsI	RAATTY	4 cut(s)	1181, 1223, 1282, 1593
AcuI	CTGAAG	3 cut(s)	447, 1062, 1671
AcyI	GRCGYC	1 cut(s)	745
AfaI	GTAC	2 cut(s)	520, 592
AfiI	CCNNNNNNNGG	5 cut(s)	664, 832, 1408, 1749, 1777
AflIII	ACRYGT	2 cut(s)	989, 1381
AjiI	CACGTC	1 cut(s)	29
AjnI	CCWGG	3 cut(s)	473, 967, 1375
AjuI	GAANNNNNNNTTGG	2 cut(s)	1784, 1816
AleI	CACNNNNGTG	1 cut(s)	288
AluBI	AGCT	7 cut(s)	314, 703, 980, 1049, 1072, 1502, 1721
AluI	AGCT	7 cut(s)	314, 703, 980, 1049, 1072, 1502, 1721
Alw21I	GWGCWC	2 cut(s)	285, 1051
Alw26I	GTCTC	3 cut(s)	104, 720, 1340
Alw44I	GTGCAC	1 cut(s)	281
AlwI	GGATC	1 cut(s)	131
AoxI	GGCC	5 cut(s)	922, 1025, 1410, 1751, 1827
ApaLI	GTGCAC	1 cut(s)	281
ApeKI	GCWGC	7 cut(s)	81, 964, 1304, 1421, 1502, 1522, 1718
ApoI	RAATTY	4 cut(s)	1181, 1223, 1282, 1593
Asp700I	GAANNNNTTC	3 cut(s)	228, 684, 1559
AspLEI	GCGC	3 cut(s)	74, 76, 106
AspS9I	GGNCC	2 cut(s)	1752, 1788
AsuC2I	CCSGG	1 cut(s)	1587
AsuHPI	GGTGA	4 cut(s)	260, 302, 506, 791
AvaII	GGWCC	1 cut(s)	1788
AxyI	CCTNAGG	1 cut(s)	933
BaeGI	GKGCMC	2 cut(s)	102, 285
BaeI	ACNNNNGTAYC	2 cut(s)	864, 897
BanII	GRGCYC	1 cut(s)	1051
BauI	CACGAG	2 cut(s)	1276, 1698
Bbv12I	GWGCWC	2 cut(s)	285, 1051
BbvI	GCAGC	7 cut(s)	68, 951, 1291, 1408, 1489, 1534, 1730
BccI	CCATC	8 cut(s)	491, 574, 655, 734, 764, 1613, 1670, 1779
BceAI	ACGGC	3 cut(s)	35, 617, 1386
BcgI	CGANNNNNNTGC	4 cut(s)	1001, 1035, 1267, 1301
BciT130I	CCWGG	3 cut(s)	475, 969, 1377
BclI	TGATCA	1 cut(s)	1657
BcnI	CCSGG	1 cut(s)	1587
BcoDI	GTCTC	3 cut(s)	104, 720, 1340
BfaI	CTAG	2 cut(s)	221, 1023
BfmI	CTRYAG	1 cut(s)	85
BglI	GCCNNNNNGGC	1 cut(s)	1418
BisI	GCNGC	8 cut(s)	82, 116, 965, 1305, 1422, 1503, 1523, 1719
BlsI	GCNGC	8 cut(s)	83, 117, 966, 1306, 1423, 1504, 1524, 1720
Bme1390I	CCNGG	4 cut(s)	475, 969, 1377, 1587
Bme18I	GGWCC	1 cut(s)	1788
BmgBI	CACGTC	1 cut(s)	29
BmgT120I	GGNCC	2 cut(s)	1752, 1788
BmiI	GGNNCC	3 cut(s)	456, 1488, 1609
BmrFI	CCNGG	4 cut(s)	475, 969, 1377, 1587
BmrI	ACTGGG	1 cut(s)	312
BmsI	GCATC	1 cut(s)	951
BmuI	ACTGGG	1 cut(s)	312
BpmI	CTGGAG	3 cut(s)	936, 990, 1446
BpuEI	CTTGAG	3 cut(s)	261, 507, 596
BpuMI	CCSGG	1 cut(s)	1587
BsaAI	YACGTR	1 cut(s)	518
BsaBI	GATNNNNATC	1 cut(s)	1641
BsaHI	GRCGYC	1 cut(s)	745
BsaJI	CCNNGG	8 cut(s)	243, 449, 1194, 1375, 1402, 1586, 1599, 1771
BsaXI	ACNNNNNCTCC	4 cut(s)	634, 664, 979, 1009
Bsc4I	CCNNNNNNNGG	5 cut(s)	664, 832, 1408, 1749, 1777
Bse1I	ACTGG	3 cut(s)	318, 496, 1108
Bse21I	CCTNAGG	1 cut(s)	933
Bse3DI	GCAATG	1 cut(s)	264
Bse8I	GATNNNNATC	1 cut(s)	1641
BseBI	CCWGG	3 cut(s)	475, 969, 1377
BseDI	CCNNGG	8 cut(s)	243, 449, 1194, 1375, 1402, 1586, 1599, 1771
BseGI	GGATG	4 cut(s)	301, 340, 1642, 1790
BseJI	GATNNNNATC	1 cut(s)	1641
BseLI	CCNNNNNNNGG	5 cut(s)	664, 832, 1408, 1749, 1777
BseMI	GCAATG	1 cut(s)	264
BseMII	CTCAG	2 cut(s)	549, 924
BseNI	ACTGG	3 cut(s)	318, 496, 1108
BsePI	GCGCGC	1 cut(s)	72
BseRI	GAGGAG	2 cut(s)	160, 1679
BseSI	GKGCMC	2 cut(s)	102, 285
BseXI	GCAGC	7 cut(s)	68, 951, 1291, 1408, 1489, 1534, 1730
BseYI	CCCAGC	1 cut(s)	118
Bsh1236I	CGCG	4 cut(s)	33, 74, 104, 115
BshFI	GGCC	5 cut(s)	924, 1027, 1412, 1753, 1829
BsiHKAI	GWGCWC	2 cut(s)	285, 1051
BsiSI	CCGG	1 cut(s)	1586
BslFI	GGGAC	1 cut(s)	1581
BslI	CCNNNNNNNGG	5 cut(s)	664, 832, 1408, 1749, 1777
BsmAI	GTCTC	3 cut(s)	104, 720, 1340
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	1 cut(s)	1581
BsmI	GAATGC	3 cut(s)	47, 1334, 1720
BsnI	GGCC	5 cut(s)	924, 1027, 1412, 1753, 1829
Bsp1286I	GDGCHC	3 cut(s)	102, 285, 1051
Bsp143I	GATC	2 cut(s)	123, 1657
Bsp68I	TCGCGA	1 cut(s)	33
BspACI	CCGC	4 cut(s)	115, 1399, 1634, 1709
BspANI	GGCC	5 cut(s)	924, 1027, 1412, 1753, 1829
BspCNI	CTCAG	2 cut(s)	550, 925
BspFNI	CGCG	4 cut(s)	33, 74, 104, 115
BspLI	GGNNCC	3 cut(s)	456, 1488, 1609
BspPI	GGATC	1 cut(s)	131
BspQI	GCTCTTC	1 cut(s)	1512
BsrDI	GCAATG	1 cut(s)	264
BsrI	ACTGG	3 cut(s)	318, 496, 1108
BssECI	CCNNGG	8 cut(s)	243, 449, 1194, 1375, 1402, 1586, 1599, 1771
BssHII	GCGCGC	1 cut(s)	72
BssMI	GATC	2 cut(s)	123, 1657
BssNI	GRCGYC	1 cut(s)	745
BssSI	CACGAG	2 cut(s)	1276, 1698
BssT1I	CCWWGG	4 cut(s)	243, 449, 1194, 1771
Bst2BI	CACGAG	2 cut(s)	1276, 1698
Bst2UI	CCWGG	3 cut(s)	475, 969, 1377
Bst4CI	ACNGT	1 cut(s)	534
Bst6I	CTCTTC	3 cut(s)	807, 1512, 1538
BstACI	GRCGYC	1 cut(s)	745
BstAPI	GCANNNNNTGC	1 cut(s)	1502
BstBAI	YACGTR	1 cut(s)	518
BstC8I	GCNNGC	4 cut(s)	74, 102, 1029, 1309
BstDEI	CTNAG	3 cut(s)	558, 933, 1763
BstDSI	CCRYGG	1 cut(s)	1402
BstF5I	GGATG	4 cut(s)	301, 340, 1642, 1790
BstFNI	CGCG	4 cut(s)	33, 74, 104, 115
BstHHI	GCGC	3 cut(s)	74, 76, 106
BstKTI	GATC	2 cut(s)	126, 1660
BstMAI	GTCTC	3 cut(s)	104, 720, 1340
BstMBI	GATC	2 cut(s)	123, 1657
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 112, 730, 1028, 1418, 1502, 1715
BstNI	CCWGG	3 cut(s)	475, 969, 1377
BstNSI	RCATGY	6 cut(s)	733, 993, 1311, 1353, 1385, 1798
BstSCI	CCNGG	4 cut(s)	473, 967, 1375, 1585
BstSFI	CTRYAG	1 cut(s)	85
BstSLI	GKGCMC	2 cut(s)	102, 285
BstUI	CGCG	4 cut(s)	33, 74, 104, 115
BstV1I	GCAGC	7 cut(s)	68, 951, 1291, 1408, 1489, 1534, 1730
BstXI	CCANNNNNNTGG	1 cut(s)	1098
Bsu36I	CCTNAGG	1 cut(s)	933
BsuRI	GGCC	5 cut(s)	924, 1027, 1412, 1753, 1829
BtgI	CCRYGG	1 cut(s)	1402
BtrI	CACGTC	1 cut(s)	29
BtsCI	GGATG	4 cut(s)	301, 340, 1642, 1790
BtsI	GCAGTG	2 cut(s)	76, 621
BtsIMutI	CAGTG	3 cut(s)	76, 325, 621
BtuMI	TCGCGA	1 cut(s)	33
Cac8I	GCNNGC	4 cut(s)	74, 102, 1029, 1309
CfoI	GCGC	3 cut(s)	74, 76, 106
Cfr13I	GGNCC	2 cut(s)	1752, 1788
CseI	GACGC	3 cut(s)	121, 734, 1502
Csp6I	GTAC	2 cut(s)	519, 591
CviQI	GTAC	2 cut(s)	519, 591
DdeI	CTNAG	3 cut(s)	558, 933, 1763
DpnI	GATC	2 cut(s)	125, 1659
DpnII	GATC	2 cut(s)	123, 1657
DraI	TTTAAA	2 cut(s)	1171, 1318
Eam1104I	CTCTTC	3 cut(s)	807, 1512, 1538
EarI	CTCTTC	3 cut(s)	807, 1512, 1538
Ecl136II	GAGCTC	1 cut(s)	1049
Eco130I	CCWWGG	4 cut(s)	243, 449, 1194, 1771
Eco147I	AGGCCT	2 cut(s)	924, 1027
Eco24I	GRGCYC	1 cut(s)	1051
Eco47I	GGWCC	1 cut(s)	1788
Eco53kI	GAGCTC	1 cut(s)	1049
Eco57I	CTGAAG	3 cut(s)	447, 1062, 1671
Eco81I	CCTNAGG	1 cut(s)	933
EcoICRI	GAGCTC	1 cut(s)	1049
EcoRII	CCWGG	3 cut(s)	473, 967, 1375
EcoT14I	CCWWGG	4 cut(s)	243, 449, 1194, 1771
EcoT22I	ATGCAT	1 cut(s)	1009
EcoT38I	GRGCYC	1 cut(s)	1051
ErhI	CCWWGG	4 cut(s)	243, 449, 1194, 1771
Esp3I	CGTCTC	1 cut(s)	104
FalI	AAGNNNNNCTT	8 cut(s)	442, 474, 687, 719, 848, 880, 1436, 1468
FaqI	GGGAC	1 cut(s)	1581
FauI	CCCGC	1 cut(s)	1702
FbaI	TGATCA	1 cut(s)	1657
Fnu4HI	GCNGC	8 cut(s)	82, 116, 965, 1305, 1422, 1503, 1523, 1719
FokI	GGATG	4 cut(s)	308, 347, 1649, 1797
FriOI	GRGCYC	1 cut(s)	1051
Fsp4HI	GCNGC	8 cut(s)	82, 116, 965, 1305, 1422, 1503, 1523, 1719
FspBI	CTAG	2 cut(s)	221, 1023
GlaI	GCGC	3 cut(s)	73, 75, 105
GluI	GCNGC	8 cut(s)	82, 116, 965, 1305, 1422, 1503, 1523, 1719
GsaI	CCCAGC	1 cut(s)	122
GsuI	CTGGAG	3 cut(s)	936, 990, 1446
HaeIII	GGCC	5 cut(s)	924, 1027, 1412, 1753, 1829
HapII	CCGG	1 cut(s)	1586
HgaI	GACGC	3 cut(s)	121, 734, 1502
HhaI	GCGC	3 cut(s)	74, 76, 106
Hin1I	GRCGYC	1 cut(s)	745
Hin6I	GCGC	3 cut(s)	72, 74, 104
HinP1I	GCGC	3 cut(s)	72, 74, 104
HincII	GTYRAC	3 cut(s)	23, 883, 1482
HindII	GTYRAC	3 cut(s)	23, 883, 1482
HinfI	GANTC	6 cut(s)	171, 443, 643, 822, 841, 1767
HpaI	GTTAAC	1 cut(s)	883
HpaII	CCGG	1 cut(s)	1586
HphI	GGTGA	4 cut(s)	260, 302, 506, 791
Hpy166II	GTNNAC	5 cut(s)	23, 283, 709, 883, 1482
Hpy188I	TCNGA	6 cut(s)	559, 750, 1296, 1600, 1647, 1690
Hpy8I	GTNNAC	5 cut(s)	23, 283, 709, 883, 1482
Hpy99I	CGWCG	1 cut(s)	33
HpyCH4III	ACNGT	1 cut(s)	534
HpyCH4IV	ACGT	3 cut(s)	28, 517, 1233
HpyCH4V	TGCA	9 cut(s)	45, 257, 283, 485, 1007, 1307, 1332, 1353, 1718
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 112, 730, 1028, 1418, 1502, 1715
HpyF3I	CTNAG	3 cut(s)	558, 933, 1763
HpySE526I	ACGT	3 cut(s)	28, 517, 1233
Hsp92I	GRCGYC	1 cut(s)	745
HspAI	GCGC	3 cut(s)	72, 74, 104
Ksp22I	TGATCA	1 cut(s)	1657
KspAI	GTTAAC	1 cut(s)	883
Kzo9I	GATC	2 cut(s)	123, 1657
LguI	GCTCTTC	1 cut(s)	1512
LmnI	GCTCC	3 cut(s)	319, 700, 1046
Lsp1109I	GCAGC	7 cut(s)	68, 951, 1291, 1408, 1489, 1534, 1730
LweI	GCATC	1 cut(s)	951
MaeI	CTAG	2 cut(s)	221, 1023
MaeII	ACGT	3 cut(s)	28, 517, 1233
MaeIII	GTNAC	5 cut(s)	320, 597, 985, 1448, 1807
MalI	GATC	2 cut(s)	125, 1659
MboI	GATC	2 cut(s)	123, 1657
MhlI	GDGCHC	3 cut(s)	102, 285, 1051
MluCI	AATT	9 cut(s)	252, 544, 585, 1181, 1223, 1282, 1559, 1593, 1852
MlyI	GAGTC	3 cut(s)	637, 831, 1776
MmeI	TCCRAC	3 cut(s)	193, 257, 1585
Mph1103I	ATGCAT	1 cut(s)	1009
MroXI	GAANNNNTTC	3 cut(s)	228, 684, 1559
MslI	CAYNNNNRTG	2 cut(s)	288, 1296
MspA1I	CMGCKG	1 cut(s)	1502
MspI	CCGG	1 cut(s)	1586
MspR9I	CCNGG	4 cut(s)	475, 969, 1377, 1587
Mva1269I	GAATGC	3 cut(s)	47, 1334, 1720
MvaI	CCWGG	3 cut(s)	475, 969, 1377
MvnI	CGCG	4 cut(s)	33, 74, 104, 115
MwoI	GCNNNNNNNGC	7 cut(s)	78, 112, 730, 1028, 1418, 1502, 1715
NciI	CCSGG	1 cut(s)	1587
NdeII	GATC	2 cut(s)	123, 1657
NlaIV	GGNNCC	3 cut(s)	456, 1488, 1609
NmuCI	GTSAC	5 cut(s)	320, 597, 985, 1448, 1807
NruI	TCGCGA	1 cut(s)	33
NsiI	ATGCAT	1 cut(s)	1009
NspI	RCATGY	6 cut(s)	733, 993, 1311, 1353, 1385, 1798
OliI	CACNNNNGTG	1 cut(s)	288
PaeI	GCATGC	1 cut(s)	1311
PauI	GCGCGC	1 cut(s)	72
PceI	AGGCCT	2 cut(s)	924, 1027
PciI	ACATGT	2 cut(s)	989, 1381
PciSI	GCTCTTC	1 cut(s)	1512
PctI	GAATGC	3 cut(s)	47, 1334, 1720
PdmI	GAANNNNTTC	3 cut(s)	228, 684, 1559
PfeI	GAWTC	3 cut(s)	171, 443, 841
PflMI	CCANNNNNTGG	1 cut(s)	1749
PkrI	GCNGC	8 cut(s)	83, 117, 966, 1306, 1423, 1504, 1524, 1720
PleI	GAGTC	3 cut(s)	637, 830, 1775
PpsI	GAGTC	3 cut(s)	637, 830, 1775
Ppu21I	YACGTR	1 cut(s)	518
PscI	ACATGT	2 cut(s)	989, 1381
Psp124BI	GAGCTC	1 cut(s)	1051
Psp6I	CCWGG	3 cut(s)	473, 967, 1375
PspFI	CCCAGC	1 cut(s)	118
PspGI	CCWGG	3 cut(s)	473, 967, 1375
PspN4I	GGNNCC	3 cut(s)	456, 1488, 1609
PspPI	GGNCC	2 cut(s)	1752, 1788
PteI	GCGCGC	1 cut(s)	72
PvuII	CAGCTG	1 cut(s)	1502
RruI	TCGCGA	1 cut(s)	33
RsaI	GTAC	2 cut(s)	520, 592
RsaNI	GTAC	2 cut(s)	519, 591
RseI	CAYNNNNRTG	2 cut(s)	288, 1296
SacI	GAGCTC	1 cut(s)	1051
SapI	GCTCTTC	1 cut(s)	1512
SatI	GCNGC	8 cut(s)	82, 116, 965, 1305, 1422, 1503, 1523, 1719
Sau3AI	GATC	2 cut(s)	123, 1657
Sau96I	GGNCC	2 cut(s)	1752, 1788
SchI	GAGTC	3 cut(s)	637, 831, 1776
ScrFI	CCNGG	4 cut(s)	475, 969, 1377, 1587
SduI	GDGCHC	3 cut(s)	102, 285, 1051
SfaNI	GCATC	1 cut(s)	951
SfcI	CTRYAG	1 cut(s)	85
SinI	GGWCC	1 cut(s)	1788
SmiMI	CAYNNNNRTG	2 cut(s)	288, 1296
SmlI	CTYRAG	3 cut(s)	276, 522, 575
SmoI	CTYRAG	3 cut(s)	276, 522, 575
SphI	GCATGC	1 cut(s)	1311
Sse9I	AATT	9 cut(s)	252, 544, 585, 1181, 1223, 1282, 1559, 1593, 1852
SseBI	AGGCCT	2 cut(s)	924, 1027
SsiI	CCGC	4 cut(s)	115, 1399, 1634, 1709
SspMI	CTAG	2 cut(s)	221, 1023
SstI	GAGCTC	1 cut(s)	1051
StuI	AGGCCT	2 cut(s)	924, 1027
StyD4I	CCNGG	4 cut(s)	473, 967, 1375, 1585
StyI	CCWWGG	4 cut(s)	243, 449, 1194, 1771
TaaI	ACNGT	1 cut(s)	534
TaiI	ACGT	3 cut(s)	31, 520, 1236
TaqI	TCGA	1 cut(s)	1068
TasI	AATT	9 cut(s)	252, 544, 585, 1181, 1223, 1282, 1559, 1593, 1852
TauI	GCSGC	1 cut(s)	118
TfiI	GAWTC	3 cut(s)	171, 443, 841
TscAI	CASTG	3 cut(s)	83, 325, 621
TseFI	GTSAC	5 cut(s)	320, 597, 985, 1448, 1807
TseI	GCWGC	7 cut(s)	81, 964, 1304, 1421, 1502, 1522, 1718
Tsp45I	GTSAC	5 cut(s)	320, 597, 985, 1448, 1807
TspDTI	ATGAA	8 cut(s)	284, 335, 354, 477, 677, 1146, 1266, 1405
TspGWI	ACGGA	2 cut(s)	1499, 1567
TspRI	CASTG	3 cut(s)	83, 325, 621
Van91I	CCANNNNNTGG	1 cut(s)	1749
VneI	GTGCAC	1 cut(s)	281
VpaK11BI	GGWCC	1 cut(s)	1788
XapI	RAATTY	4 cut(s)	1181, 1223, 1282, 1593
XbaI	TCTAGA	1 cut(s)	220
XceI	RCATGY	6 cut(s)	733, 993, 1311, 1353, 1385, 1798
XmnI	GAANNNNTTC	3 cut(s)	228, 684, 1559
XspI	CTAG	2 cut(s)	221, 1023
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.