Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0012100

Physical Location & Seq

Genomic Coordinates Forward (+)

23621350 .. 23630206

Gene Structure 8857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1155600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCTGTTGAAGAAGTTGCCGAGCAGGTAGTTGCGCCGCCGCAGAAGGCGAAGGAGCCTTCCGAAGATGAGAAACGGAGGAAGAAAATAGCGGCCGGAGCTTTGATGAAAGCGGTGATAAGGCCCGGTGGAGGCGATTCGACCCCTTCGGATGGTTATCAGGTTGTATATCATTCCACTGTTAGAACAATGGATGGAGTTGTTGTCGAATCGTCCCGATCGGAATATGGAGGCAAGGGTACTCCTATTCGACATGTTTTGGGAAGGAGCAAGATCATAGTGGGTTTGCTAGAAGGACTTCCAACAATGCTGAAGGGTGAAGTTGCAATGTTCAAAATGAAACCCCAAGTGCACTACGGTGAGGATGATTGCCCAGTTTCAGCACCCAGCGGCTTTCCAAAGGATGACGAACTTCATTTTGAAATTGAGATGATAGATTTCTTTAAAGCCAAGGTCGTTAGTGATGACTTGGGAGTTCTAAAGAAGGTAATAACTGAAGGTCAGGGTTGGGAATCGCCAAGGGAACCTTATGAAGTAAAAGCCTGGATTTCTGCGAAGACAGGTGATGGAAAAGTGCTTGTTTCACGTACTCAAGGAGAGCCATTTTTCTTTAATTTTGGAAAGTCAGAGGTACCTAAAGGTCTTGAGATGGGAATTGGTACAATGACACGGGAAGAGAAGGCAATAATATACGTGACCAGCAAGTACTTAACTCCATCTCCTTTCCTGCCTGGAGTAGAAGGTGTTGAGGAAGTTCATTTTGAAGTAGAGCTTGCCCACTTTATTCAGGTGCGTGACATGCTTGGTGACGGGCGCCTGATAAAACGTCGTATTCATGATGGAAAAGGTGAGTTTCCTATGGATTGCCCTCTTCATGACAGCCTACTACGTGTCCATTATAAGGGTATGCTTCTTAACGAGGAAAAGACTATCTTCTATGATACAAGAGTTGATAACGATGGTCAGCCTTTGGAGTTTTGTTCTGGAGAAGGCCTTGTGCCCGAGGGATTTGAAATGTGTGTTCGCTTGATGGTGCCTGAAGAGATAGCTCTCGTCACATGCCCTCCTGATTATGCATATGACAAATTTCCTAGGCCTGCTAATGTTCCTGAGGGTGCTCATATTCAATGGGAAATCGAGCTTCTTGGGTTTGAGATGCCAAAGGATTGGACTGGTTTAAATTTTCAAAGCATAATGGATGAAGCAGAGAAGATTAGAAATACGGGAAACAGGCTATTCAAAGAAGGAAAATTTGAACTTGCTAAGGCTAAGTATGACAAGGTACTTAGGGAATTTAATCATGTTAATCCTCAAGATGATGAAGAGGGGAAAATATTTGCAAATACAAGGAATCTGTTACATCTGAATGTTGCTGCATGCTTCCTGAAGATGGGAGAATGCAGAAAATCCATTGAGACATGCAACAAGGTTTTAGAAGCGAACCCTGGACATGTCAAGGCTCTTTACCGCCGCGGTATGGCCTACATAACTCTTGGGGATTTCGAGGAAGCAAAGCGTGACTTCAACACGATGATTAAACTAGACAAGTCAACCGAACCTGATGCTACAGCTGCTCTGCTAAAAGTTAAACAGAAAGAACAGGAAGTTGAGAAGAAGGTACGGAAACAATTTAAGGGCCTATTTGACAAGAAGCCAGGGGAAATTGCAGAGGTTGGAACTGAAGACGTAGATCAGCCTGCAGTTGAGAACCCTAAGAGTGATGATAAGGAGGATTCCGACGGAGATAATTCAGACGAATCTCATGAAACTGTGGATGACCCTCCCAGAACATCCTGGTTCTCTCTACTCTGGCCTAAAAGACTACTTGCAGCCCTAGGGCGGCCTGGATGTGCGATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000038 GO:0000413 GO:0000902 GO:0003006 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006457 GO:0006464 GO:0006629 GO:0006631 GO:0006633 GO:0006807 GO:0007163 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009880 GO:0009987 GO:0010033 GO:0010154 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0019752 GO:0022414 GO:0022622 GO:0030010 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042761 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0061077 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0090696 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_6 TPR_8

Protein Analysis

621

Amino Acids

69.52

Weight (kDa)

5.33

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	46 - 144	3.3e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	171 - 258	2.7e-08	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	294 - 382	1.6e-14	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_1	PF00515	485 - 516	2.7e-06	Tetratricopeptide repeat
TPR_2	PF07719	486 - 516	6.3e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54010 AT3G54010
fragaria_vesca	FvH4_6g12640 FvH4_6g12640 FvH4_6g12640
malus_domestica	MD04G1140300.v1.1 MD12G1155600.v1.1
prunus_persica	Prupe.6G265400_v2.0.a1
pyrus_communis	pycom04g12790 pycom12g14770
rosa_chinensis	RchiOBHm_Chr3g0464491
rosa_laevigata	RLG00000024692
rosa_multiflora	Rmu_sc0003074.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415620
rosa_rugosa	Rorug03G0072600
rosa_samantha	Rh3BG134800 Rh3CG137300 Rh3DG136100
rosa_wichuraiana	Rw3G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
Acc36I	ACCTGC	1 cut(s)	16
Acc65I	GGTACC	1 cut(s)	631
AccB1I	GGYRCC	3 cut(s)	631, 813, 1033
AccII	CGCG	1 cut(s)	1473
AciI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1468, 1471, 1473, 1840
AcoI	YGGCCR	1 cut(s)	93
AcsI	RAATTY	4 cut(s)	1085, 1180, 1250, 1292
AcuI	CTGAAG	5 cut(s)	332, 516, 1059, 1406, 1701
AcyI	GRCGYC	1 cut(s)	814
AfaI	GTAC	7 cut(s)	241, 589, 633, 661, 707, 1284, 1620
AfiI	CCNNNNNNNGG	6 cut(s)	131, 152, 901, 1390, 1477, 1839
AflIII	ACRYGT	3 cut(s)	253, 889, 1450
AjnI	CCWGG	6 cut(s)	542, 730, 1444, 1654, 1793, 1843
AleI	CACNNNNGTG	1 cut(s)	357
AluBI	AGCT	5 cut(s)	101, 772, 1049, 1141, 1571
AluI	AGCT	5 cut(s)	101, 772, 1049, 1141, 1571
Alw21I	GWGCWC	2 cut(s)	354, 1120
Alw26I	GTCTC	1 cut(s)	1409
Alw44I	GTGCAC	1 cut(s)	350
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	8 cut(s)	93, 122, 991, 1094, 1479, 1636, 1811, 1841
ApaLI	GTGCAC	1 cut(s)	350
ApeKI	GCWGC	3 cut(s)	1373, 1571, 1829
ApoI	RAATTY	4 cut(s)	1085, 1180, 1250, 1292
Asp700I	GAANNNNTTC	1 cut(s)	297
Asp718I	GGTACC	1 cut(s)	631
AspA2I	CCTAGG	2 cut(s)	1091, 1834
AspLEI	GCGC	2 cut(s)	37, 816
AspS9I	GGNCC	2 cut(s)	123, 1636
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	6 cut(s)	127, 329, 371, 575, 818, 860
AvaI	CYCGRG	1 cut(s)	1001
AvrII	CCTAGG	2 cut(s)	1091, 1834
AxyI	CCTNAGG	1 cut(s)	1110
BaeGI	GKGCMC	2 cut(s)	354, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	933, 966
BanI	GGYRCC	3 cut(s)	631, 813, 1033
BbsI	GAAGAC	2 cut(s)	563, 1689
Bbv12I	GWGCWC	2 cut(s)	354, 1120
BbvI	GCAGC	3 cut(s)	1360, 1558, 1841
BccI	CCATC	9 cut(s)	146, 188, 560, 643, 724, 833, 953, 1024, 1384
BcgI	CGANNNNNNTGC	2 cut(s)	1544, 1578
BciT130I	CCWGG	6 cut(s)	544, 732, 1446, 1656, 1795, 1845
BcnI	CCSGG	1 cut(s)	126
BcoDI	GTCTC	1 cut(s)	1409
BfaI	CTAG	4 cut(s)	290, 1092, 1541, 1835
BfmI	CTRYAG	2 cut(s)	1566, 1698
BfoI	RGCGCY	1 cut(s)	817
BfuAI	ACCTGC	1 cut(s)	16
BisI	GCNGC	9 cut(s)	38, 41, 93, 391, 1374, 1471, 1572, 1830, 1841
BlnI	CCTAGG	2 cut(s)	1091, 1834
BlsI	GCNGC	9 cut(s)	39, 42, 94, 392, 1375, 1472, 1573, 1831, 1842
BmcAI	AGTACT	1 cut(s)	707
Bme1390I	CCNGG	7 cut(s)	126, 544, 732, 1446, 1656, 1795, 1845
BmeT110I	CYCGRG	1 cut(s)	1001
BmgT120I	GGNCC	2 cut(s)	123, 1636
BmiI	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
BmrFI	CCNGG	7 cut(s)	126, 544, 732, 1446, 1656, 1795, 1845
BmrI	ACTGGG	1 cut(s)	368
BmsI	GCATC	2 cut(s)	1146, 1552
BmuI	ACTGGG	1 cut(s)	368
BpiI	GAAGAC	2 cut(s)	563, 1689
BpmI	CTGGAG	2 cut(s)	753, 1005
Bpu10I	CCTNAGC	1 cut(s)	1263
BpuEI	CTTGAG	3 cut(s)	576, 665, 1296
BpuMI	CCSGG	1 cut(s)	126
BsaAI	YACGTR	3 cut(s)	587, 694, 890
BsaBI	GATNNNNATC	1 cut(s)	156
BsaHI	GRCGYC	1 cut(s)	814
BsaJI	CCNNGG	8 cut(s)	450, 518, 1002, 1091, 1444, 1471, 1655, 1834
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 703, 733, 1048, 1078
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 152, 901, 1390, 1477, 1839
Bse1I	ACTGG	2 cut(s)	374, 1177
Bse21I	CCTNAGG	1 cut(s)	1110
Bse3DI	GCAATG	1 cut(s)	333
Bse8I	GATNNNNATC	1 cut(s)	156
BseBI	CCWGG	6 cut(s)	544, 732, 1446, 1656, 1795, 1845
BseDI	CCNNGG	8 cut(s)	450, 518, 1002, 1091, 1444, 1471, 1655, 1834
BseGI	GGATG	8 cut(s)	157, 199, 370, 409, 1204, 1780, 1790, 1853
BseJI	GATNNNNATC	1 cut(s)	156
BseLI	CCNNNNNNNGG	6 cut(s)	131, 152, 901, 1390, 1477, 1839
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	1 cut(s)	1101
BseNI	ACTGG	2 cut(s)	374, 1177
BseSI	GKGCMC	2 cut(s)	354, 1002
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	3 cut(s)	1360, 1558, 1841
BseYI	CCCAGC	1 cut(s)	386
Bsh1236I	CGCG	1 cut(s)	1473
Bsh1285I	CGRYCG	2 cut(s)	96, 221
BshFI	GGCC	8 cut(s)	95, 124, 993, 1096, 1481, 1638, 1813, 1843
BshNI	GGYRCC	3 cut(s)	631, 813, 1033
BsiEI	CGRYCG	2 cut(s)	96, 221
BsiHKAI	GWGCWC	2 cut(s)	354, 1120
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	2 cut(s)	96, 126
BslFI	GGGAC	1 cut(s)	199
BslI	CCNNNNNNNGG	6 cut(s)	131, 152, 901, 1390, 1477, 1839
BsmAI	GTCTC	1 cut(s)	1409
BsmFI	GGGAC	1 cut(s)	199
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	8 cut(s)	95, 124, 993, 1096, 1481, 1638, 1813, 1843
BsoBI	CYCGRG	1 cut(s)	1001
Bsp1286I	GDGCHC	3 cut(s)	354, 1002, 1120
Bsp143I	GATC	3 cut(s)	218, 273, 1690
BspACI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1468, 1471, 1473, 1840
BspANI	GGCC	8 cut(s)	95, 124, 993, 1096, 1481, 1638, 1813, 1843
BspCNI	CTCAG	1 cut(s)	1102
BspFNI	CGCG	1 cut(s)	1473
BspHI	TCATGA	3 cut(s)	835, 874, 1762
BspLI	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
BspMAI	CTGCAG	1 cut(s)	1702
BspMI	ACCTGC	1 cut(s)	16
BspT107I	GGYRCC	3 cut(s)	631, 813, 1033
BsrDI	GCAATG	1 cut(s)	333
BsrI	ACTGG	2 cut(s)	374, 1177
BssECI	CCNNGG	8 cut(s)	450, 518, 1002, 1091, 1444, 1471, 1655, 1834
BssMI	GATC	3 cut(s)	218, 273, 1690
BssNI	GRCGYC	1 cut(s)	814
BssT1I	CCWWGG	4 cut(s)	450, 518, 1091, 1834
Bst2UI	CCWGG	6 cut(s)	544, 732, 1446, 1656, 1795, 1845
Bst4CI	ACNGT	3 cut(s)	181, 359, 1771
Bst6I	CTCTTC	4 cut(s)	669, 876, 1035, 1317
BstACI	GRCGYC	1 cut(s)	814
BstBAI	YACGTR	3 cut(s)	587, 694, 890
BstC8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
BstDEI	CTNAG	5 cut(s)	1110, 1263, 1269, 1286, 1713
BstDSI	CCRYGG	1 cut(s)	1471
BstF5I	GGATG	8 cut(s)	157, 199, 370, 409, 1204, 1780, 1790, 1853
BstFNI	CGCG	1 cut(s)	1473
BstH2I	RGCGCY	1 cut(s)	817
BstHHI	GCGC	2 cut(s)	37, 816
BstKTI	GATC	3 cut(s)	221, 276, 1693
BstMAI	GTCTC	1 cut(s)	1409
BstMBI	GATC	3 cut(s)	218, 273, 1690
BstMCI	CGRYCG	2 cut(s)	96, 221
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 799, 1571
BstNI	CCWGG	6 cut(s)	544, 732, 1446, 1656, 1795, 1845
BstNSI	RCATGY	6 cut(s)	257, 802, 1062, 1380, 1422, 1454
BstSCI	CCNGG	7 cut(s)	124, 542, 730, 1444, 1654, 1793, 1843
BstSFI	CTRYAG	2 cut(s)	1566, 1698
BstSLI	GKGCMC	2 cut(s)	354, 1002
BstUI	CGCG	1 cut(s)	1473
BstV1I	GCAGC	3 cut(s)	1360, 1558, 1841
BstV2I	GAAGAC	2 cut(s)	563, 1689
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstZI	CGGCCG	1 cut(s)	93
Bsu36I	CCTNAGG	1 cut(s)	1110
BsuRI	GGCC	8 cut(s)	95, 124, 993, 1096, 1481, 1638, 1813, 1843
BtgI	CCRYGG	1 cut(s)	1471
BtsCI	GGATG	8 cut(s)	157, 199, 370, 409, 1204, 1780, 1790, 1853
BtsIMutI	CAGTG	1 cut(s)	177
BveI	ACCTGC	1 cut(s)	16
Cac8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
CciI	TCATGA	3 cut(s)	835, 874, 1762
CfoI	GCGC	2 cut(s)	37, 816
Cfr13I	GGNCC	2 cut(s)	123, 1636
Cfr42I	CCGCGG	1 cut(s)	1474
Csp6I	GTAC	7 cut(s)	240, 588, 632, 660, 706, 1283, 1619
CviQI	GTAC	7 cut(s)	240, 588, 632, 660, 706, 1283, 1619
DdeI	CTNAG	5 cut(s)	1110, 1263, 1269, 1286, 1713
DinI	GGCGCC	1 cut(s)	815
DpnI	GATC	3 cut(s)	220, 275, 1692
DpnII	GATC	3 cut(s)	218, 273, 1690
DraI	TTTAAA	2 cut(s)	445, 1179
EaeI	YGGCCR	1 cut(s)	93
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	4 cut(s)	669, 876, 1035, 1317
EarI	CTCTTC	4 cut(s)	669, 876, 1035, 1317
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	4 cut(s)	450, 518, 1091, 1834
Eco147I	AGGCCT	2 cut(s)	993, 1096
Eco52I	CGGCCG	1 cut(s)	93
Eco57I	CTGAAG	5 cut(s)	332, 516, 1059, 1406, 1701
Eco81I	CCTNAGG	1 cut(s)	1110
Eco88I	CYCGRG	1 cut(s)	1001
EcoO109I	RGGNCCY	1 cut(s)	1636
EcoRII	CCWGG	6 cut(s)	542, 730, 1444, 1654, 1793, 1843
EcoT14I	CCWWGG	4 cut(s)	450, 518, 1091, 1834
EcoT22I	ATGCAT	1 cut(s)	1078
EgeI	GGCGCC	1 cut(s)	815
EheI	GGCGCC	1 cut(s)	815
ErhI	CCWWGG	4 cut(s)	450, 518, 1091, 1834
FalI	AAGNNNNNCTT	8 cut(s)	511, 543, 756, 788, 917, 949, 1505, 1537
FaqI	GGGAC	1 cut(s)	199
FauNDI	CATATG	1 cut(s)	1078
Fnu4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1374, 1471, 1572, 1830, 1841
FokI	GGATG	7 cut(s)	164, 206, 377, 416, 1211, 1777, 1787
Fsp4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1374, 1471, 1572, 1830, 1841
FspBI	CTAG	4 cut(s)	290, 1092, 1541, 1835
GlaI	GCGC	2 cut(s)	36, 815
GluI	GCNGC	9 cut(s)	38, 41, 93, 391, 1374, 1471, 1572, 1830, 1841
GsaI	CCCAGC	1 cut(s)	390
GsuI	CTGGAG	2 cut(s)	753, 1005
HaeII	RGCGCY	1 cut(s)	817
HaeIII	GGCC	8 cut(s)	95, 124, 993, 1096, 1481, 1638, 1813, 1843
HapII	CCGG	2 cut(s)	96, 126
HhaI	GCGC	2 cut(s)	37, 816
Hin1I	GRCGYC	1 cut(s)	814
Hin6I	GCGC	2 cut(s)	35, 814
HinP1I	GCGC	2 cut(s)	35, 814
HincII	GTYRAC	1 cut(s)	1551
HindII	GTYRAC	1 cut(s)	1551
HinfI	GANTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
HpaII	CCGG	2 cut(s)	96, 126
HphI	GGTGA	6 cut(s)	127, 329, 371, 575, 818, 860
Hpy166II	GTNNAC	2 cut(s)	352, 1551
Hpy188I	TCNGA	7 cut(s)	64, 151, 223, 628, 1365, 1738, 1753
Hpy8I	GTNNAC	2 cut(s)	352, 1551
Hpy99I	CGWCG	2 cut(s)	831, 1742
HpyCH4III	ACNGT	3 cut(s)	181, 359, 1771
HpyCH4IV	ACGT	5 cut(s)	586, 693, 826, 889, 1686
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 799, 1571
HpyF3I	CTNAG	5 cut(s)	1110, 1263, 1269, 1286, 1713
HpySE526I	ACGT	5 cut(s)	586, 693, 826, 889, 1686
Hsp92I	GRCGYC	1 cut(s)	814
HspAI	GCGC	2 cut(s)	35, 814
KasI	GGCGCC	1 cut(s)	813
KpnI	GGTACC	1 cut(s)	635
KspI	CCGCGG	1 cut(s)	1474
Kzo9I	GATC	3 cut(s)	218, 273, 1690
LmnI	GCTCC	3 cut(s)	55, 98, 267
Lsp1109I	GCAGC	3 cut(s)	1360, 1558, 1841
LweI	GCATC	2 cut(s)	1146, 1552
MaeI	CTAG	4 cut(s)	290, 1092, 1541, 1835
MaeII	ACGT	5 cut(s)	586, 693, 826, 889, 1686
MaeIII	GTNAC	6 cut(s)	694, 794, 806, 1054, 1356, 1517
MalI	GATC	3 cut(s)	220, 275, 1692
MboI	GATC	3 cut(s)	218, 273, 1690
MhlI	GDGCHC	3 cut(s)	354, 1002, 1120
Mly113I	GGCGCC	1 cut(s)	814
MmeI	TCCRAC	3 cut(s)	326, 1654, 1761
Mph1103I	ATGCAT	1 cut(s)	1078
MroXI	GAANNNNTTC	1 cut(s)	297
MslI	CAYNNNNRTG	2 cut(s)	357, 1365
MspA1I	CMGCKG	3 cut(s)	390, 1473, 1571
MspI	CCGG	2 cut(s)	96, 126
MspR9I	CCNGG	7 cut(s)	126, 544, 732, 1446, 1656, 1795, 1845
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	6 cut(s)	544, 732, 1446, 1656, 1795, 1845
MvnI	CGCG	1 cut(s)	1473
MwoI	GCNNNNNNNGC	3 cut(s)	98, 799, 1571
NarI	GGCGCC	1 cut(s)	814
NciI	CCSGG	1 cut(s)	126
NdeI	CATATG	1 cut(s)	1078
NdeII	GATC	3 cut(s)	218, 273, 1690
NlaIV	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
NmeAIII	GCCGAG	1 cut(s)	46
NmuCI	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	6 cut(s)	257, 802, 1062, 1380, 1422, 1454
OliI	CACNNNNGTG	1 cut(s)	357
PaeI	GCATGC	1 cut(s)	1380
PagI	TCATGA	3 cut(s)	835, 874, 1762
PceI	AGGCCT	2 cut(s)	993, 1096
PciI	ACATGT	2 cut(s)	253, 1450
PctI	GAATGC	1 cut(s)	1403
PdmI	GAANNNNTTC	1 cut(s)	297
PfeI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
PkrI	GCNGC	9 cut(s)	39, 42, 94, 392, 1375, 1472, 1573, 1831, 1842
Ple19I	CGATCG	1 cut(s)	221
PluTI	GGCGCC	1 cut(s)	817
Ppu21I	YACGTR	3 cut(s)	587, 694, 890
PscI	ACATGT	2 cut(s)	253, 1450
PsiI	TTATAA	1 cut(s)	900
Psp6I	CCWGG	6 cut(s)	542, 730, 1444, 1654, 1793, 1843
PspFI	CCCAGC	1 cut(s)	386
PspGI	CCWGG	6 cut(s)	542, 730, 1444, 1654, 1793, 1843
PspN4I	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
PspPI	GGNCC	2 cut(s)	123, 1636
PstI	CTGCAG	1 cut(s)	1702
PvuI	CGATCG	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1571
RsaI	GTAC	7 cut(s)	241, 589, 633, 661, 707, 1284, 1620
RsaNI	GTAC	7 cut(s)	240, 588, 632, 660, 706, 1283, 1619
RseI	CAYNNNNRTG	2 cut(s)	357, 1365
SacII	CCGCGG	1 cut(s)	1474
SatI	GCNGC	9 cut(s)	38, 41, 93, 391, 1374, 1471, 1572, 1830, 1841
Sau3AI	GATC	3 cut(s)	218, 273, 1690
Sau96I	GGNCC	2 cut(s)	123, 1636
ScaI	AGTACT	1 cut(s)	707
ScrFI	CCNGG	7 cut(s)	126, 544, 732, 1446, 1656, 1795, 1845
SduI	GDGCHC	3 cut(s)	354, 1002, 1120
SfaNI	GCATC	2 cut(s)	1146, 1552
SfcI	CTRYAG	2 cut(s)	1566, 1698
SfoI	GGCGCC	1 cut(s)	815
Sfr303I	CCGCGG	1 cut(s)	1474
SgrBI	CCGCGG	1 cut(s)	1474
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1365
SmlI	CTYRAG	3 cut(s)	591, 644, 1311
SmoI	CTYRAG	3 cut(s)	591, 644, 1311
SphI	GCATGC	1 cut(s)	1380
SseBI	AGGCCT	2 cut(s)	993, 1096
SsiI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1468, 1471, 1473, 1840
SspDI	GGCGCC	1 cut(s)	813
SspI	AATATT	1 cut(s)	1335
SspMI	CTAG	4 cut(s)	290, 1092, 1541, 1835
StuI	AGGCCT	2 cut(s)	993, 1096
StyD4I	CCNGG	7 cut(s)	124, 542, 730, 1444, 1654, 1793, 1843
StyI	CCWWGG	4 cut(s)	450, 518, 1091, 1834
TaaI	ACNGT	3 cut(s)	181, 359, 1771
TaiI	ACGT	5 cut(s)	589, 696, 829, 892, 1689
TaqI	TCGA	5 cut(s)	140, 207, 250, 1137, 1503
TatI	WGTACW	1 cut(s)	705
TauI	GCSGC	6 cut(s)	40, 43, 95, 393, 1473, 1843
TfiI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
TscAI	CASTG	1 cut(s)	184
TseFI	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
TseI	GCWGC	3 cut(s)	1373, 1571, 1829
Tsp45I	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
TspGWI	ACGGA	3 cut(s)	91, 1636, 1755
TspRI	CASTG	1 cut(s)	184
VneI	GTGCAC	1 cut(s)	350
XapI	RAATTY	4 cut(s)	1085, 1180, 1250, 1292
XceI	RCATGY	6 cut(s)	257, 802, 1062, 1380, 1422, 1454
XmaJI	CCTAGG	2 cut(s)	1091, 1834
XmnI	GAANNNNTTC	1 cut(s)	297
XspI	CTAG	4 cut(s)	290, 1092, 1541, 1835
ZrmI	AGTACT	1 cut(s)	707
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.