Peptidyl-prolyl cis-trans isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54010 AT3G54010 |
| fragaria_vesca | FvH4_6g12640 FvH4_6g12640 FvH4_6g12640 |
| malus_domestica | MD04G1140300.v1.1 MD12G1155600.v1.1 |
| prunus_persica | Prupe.6G265400_v2.0.a1 |
| pyrus_communis | pycom04g12790 pycom12g14770 |
| rosa_chinensis | RchiOBHm_Chr3g0464491 |
| rosa_laevigata | RLG00000024692 |
| rosa_multiflora | Rmu_sc0003074.1_g000006 |
| rosa_roxburghii | Rroxscaffold_6G00415620 |
| rosa_rugosa | Rorug03G0072600 |
| rosa_samantha | Rh3BG134800 Rh3CG137300 Rh3DG136100 |
| rosa_wichuraiana | Rw3G011020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1688 |
| Acc36I | ACCTGC | 1 cut(s) | 1688 |
| Acc65I | GGTACC | 1 cut(s) | 628 |
| AccB1I | GGYRCC | 3 cut(s) | 17, 628, 1030 |
| AccI | GTMKAC | 1 cut(s) | 1686 |
| AciI | CCGC | 4 cut(s) | 731, 1618, 1767, 1837 |
| AcoI | YGGCCR | 1 cut(s) | 1838 |
| AcsI | RAATTY | 4 cut(s) | 294, 1289, 1348, 1535 |
| AcuI | CTGAAG | 6 cut(s) | 129, 513, 1056, 1128, 1403, 1698 |
| AcvI | CACGTG | 1 cut(s) | 668 |
| AcyI | GRCGYC | 1 cut(s) | 811 |
| AfaI | GTAC | 4 cut(s) | 586, 630, 658, 704 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 128, 898, 1387, 1836 |
| AflIII | ACRYGT | 6 cut(s) | 250, 581, 665, 886, 1055, 1447 |
| AjnI | CCWGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| AluBI | AGCT | 7 cut(s) | 380, 390, 769, 1046, 1097, 1138, 1568 |
| AluI | AGCT | 7 cut(s) | 380, 390, 769, 1046, 1097, 1138, 1568 |
| Alw21I | GWGCWC | 1 cut(s) | 1117 |
| Alw26I | GTCTC | 3 cut(s) | 70, 1406, 1685 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1670 |
| AoxI | GGCC | 6 cut(s) | 119, 988, 1091, 1476, 1808, 1838 |
| ApeKI | GCWGC | 3 cut(s) | 1370, 1568, 1826 |
| ApoI | RAATTY | 4 cut(s) | 294, 1289, 1348, 1535 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 294, 750 |
| Asp718I | GGTACC | 1 cut(s) | 628 |
| AspA2I | CCTAGG | 1 cut(s) | 1088 |
| AspLEI | GCGC | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 1809 |
| AsuHPI | GGTGA | 9 cut(s) | 127, 143, 326, 368, 572, 685, 857, 1712, 1751 |
| AvrII | CCTAGG | 1 cut(s) | 1088 |
| AxyI | CCTNAGG | 1 cut(s) | 999 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 930, 963 |
| BanI | GGYRCC | 3 cut(s) | 17, 628, 1030 |
| BbrPI | CACGTG | 1 cut(s) | 668 |
| Bbv12I | GWGCWC | 1 cut(s) | 1117 |
| BbvI | GCAGC | 3 cut(s) | 1357, 1555, 1838 |
| BccI | CCATC | 6 cut(s) | 185, 640, 800, 830, 1021, 1381 |
| BceAI | ACGGC | 2 cut(s) | 5, 839 |
| BciT130I | CCWGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| BciVI | GTATCC | 1 cut(s) | 248 |
| BclI | TGATCA | 1 cut(s) | 1741 |
| BcoDI | GTCTC | 3 cut(s) | 70, 1406, 1685 |
| BfaI | CTAG | 4 cut(s) | 287, 743, 1089, 1782 |
| BfmI | CTRYAG | 2 cut(s) | 57, 1695 |
| BfoI | RGCGCY | 1 cut(s) | 92 |
| BfuAI | ACCTGC | 1 cut(s) | 1688 |
| BfuI | GTATCC | 1 cut(s) | 248 |
| BglII | AGATCT | 1 cut(s) | 215 |
| BisI | GCNGC | 4 cut(s) | 1371, 1569, 1827, 1838 |
| BlnI | CCTAGG | 1 cut(s) | 1088 |
| BlsI | GCNGC | 4 cut(s) | 1372, 1570, 1828, 1839 |
| BmcAI | AGTACT | 1 cut(s) | 704 |
| Bme1390I | CCNGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| BmgT120I | GGNCC | 1 cut(s) | 1809 |
| BmiI | GGNNCC | 4 cut(s) | 19, 522, 630, 1032 |
| BmrFI | CCNGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| BmrI | ACTGGG | 2 cut(s) | 365, 378 |
| BmsI | GCATC | 5 cut(s) | 124, 1143, 1549, 1765, 1835 |
| BmuI | ACTGGG | 2 cut(s) | 365, 378 |
| BpmI | CTGGAG | 1 cut(s) | 1002 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1260 |
| BpuEI | CTTGAG | 3 cut(s) | 327, 573, 662 |
| BsaAI | YACGTR | 3 cut(s) | 584, 668, 887 |
| BsaHI | GRCGYC | 1 cut(s) | 811 |
| BsaJI | CCNNGG | 8 cut(s) | 447, 515, 855, 955, 1088, 1441, 1652, 1831 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 186, 216, 700, 730, 1045, 1075 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 128, 898, 1387, 1836 |
| Bse118I | RCCGGY | 1 cut(s) | 1464 |
| Bse1I | ACTGG | 4 cut(s) | 371, 384, 696, 1174 |
| Bse21I | CCTNAGG | 1 cut(s) | 999 |
| Bse3DI | GCAATG | 1 cut(s) | 330 |
| BseBI | CCWGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| BseDI | CCNNGG | 8 cut(s) | 447, 515, 855, 955, 1088, 1441, 1652, 1831 |
| BseGI | GGATG | 6 cut(s) | 10, 196, 367, 406, 811, 1850 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 128, 898, 1387, 1836 |
| BseMI | GCAATG | 1 cut(s) | 330 |
| BseMII | CTCAG | 1 cut(s) | 990 |
| BseNI | ACTGG | 4 cut(s) | 371, 384, 696, 1174 |
| BseRI | GAGGAG | 1 cut(s) | 88 |
| BseXI | GCAGC | 3 cut(s) | 1357, 1555, 1838 |
| BsgI | GTGCAG | 2 cut(s) | 44, 1417 |
| BshFI | GGCC | 6 cut(s) | 121, 990, 1093, 1478, 1810, 1840 |
| BshNI | GGYRCC | 3 cut(s) | 17, 628, 1030 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1117 |
| BsiSI | CCGG | 1 cut(s) | 1465 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 128, 898, 1387, 1836 |
| BsmAI | GTCTC | 3 cut(s) | 70, 1406, 1685 |
| BsnI | GGCC | 6 cut(s) | 121, 990, 1093, 1478, 1810, 1840 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1117 |
| Bsp143I | GATC | 2 cut(s) | 215, 1741 |
| Bsp19I | CCATGG | 2 cut(s) | 855, 955 |
| BspACI | CCGC | 4 cut(s) | 731, 1618, 1767, 1837 |
| BspANI | GGCC | 6 cut(s) | 121, 990, 1093, 1478, 1810, 1840 |
| BspCNI | CTCAG | 1 cut(s) | 991 |
| BspHI | TCATGA | 1 cut(s) | 1759 |
| BspLI | GGNNCC | 4 cut(s) | 19, 522, 630, 1032 |
| BspMAI | CTGCAG | 1 cut(s) | 1699 |
| BspMI | ACCTGC | 1 cut(s) | 1688 |
| BspQI | GCTCTTC | 1 cut(s) | 1578 |
| BspT107I | GGYRCC | 3 cut(s) | 17, 628, 1030 |
| BsrDI | GCAATG | 1 cut(s) | 330 |
| BsrFI | RCCGGY | 1 cut(s) | 1464 |
| BsrI | ACTGG | 4 cut(s) | 371, 384, 696, 1174 |
| BssAI | RCCGGY | 1 cut(s) | 1464 |
| BssECI | CCNNGG | 8 cut(s) | 447, 515, 855, 955, 1088, 1441, 1652, 1831 |
| BssMI | GATC | 2 cut(s) | 215, 1741 |
| BssNI | GRCGYC | 1 cut(s) | 811 |
| BssT1I | CCWWGG | 6 cut(s) | 447, 515, 855, 955, 1088, 1831 |
| Bst2UI | CCWGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| Bst4CI | ACNGT | 3 cut(s) | 178, 1489, 1739 |
| Bst6I | CTCTTC | 5 cut(s) | 65, 666, 873, 1032, 1578 |
| BstACI | GRCGYC | 1 cut(s) | 811 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1568, 1775 |
| BstBAI | YACGTR | 3 cut(s) | 584, 668, 887 |
| BstC8I | GCNNGC | 5 cut(s) | 596, 729, 905, 1095, 1375 |
| BstDEI | CTNAG | 2 cut(s) | 999, 1260 |
| BstDSI | CCRYGG | 2 cut(s) | 855, 955 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 126 |
| BstF5I | GGATG | 6 cut(s) | 10, 196, 367, 406, 811, 1850 |
| BstH2I | RGCGCY | 1 cut(s) | 92 |
| BstHHI | GCGC | 1 cut(s) | 91 |
| BstKTI | GATC | 2 cut(s) | 218, 1744 |
| BstMAI | GTCTC | 3 cut(s) | 70, 1406, 1685 |
| BstMBI | GATC | 2 cut(s) | 215, 1741 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 796, 1568, 1775 |
| BstNI | CCWGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| BstNSI | RCATGY | 7 cut(s) | 254, 799, 907, 1059, 1377, 1419, 1451 |
| BstSCI | CCNGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| BstSFI | CTRYAG | 2 cut(s) | 57, 1695 |
| BstV1I | GCAGC | 3 cut(s) | 1357, 1555, 1838 |
| BstX2I | RGATCY | 1 cut(s) | 215 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1164 |
| BstYI | RGATCY | 1 cut(s) | 215 |
| Bsu36I | CCTNAGG | 1 cut(s) | 999 |
| BsuI | GTATCC | 1 cut(s) | 248 |
| BsuRI | GGCC | 6 cut(s) | 121, 990, 1093, 1478, 1810, 1840 |
| BtgI | CCRYGG | 2 cut(s) | 855, 955 |
| BtsCI | GGATG | 6 cut(s) | 10, 196, 367, 406, 811, 1850 |
| BtsI | GCAGTG | 1 cut(s) | 117 |
| BtsIMutI | CAGTG | 1 cut(s) | 117 |
| BveI | ACCTGC | 1 cut(s) | 1688 |
| Cac8I | GCNNGC | 5 cut(s) | 596, 729, 905, 1095, 1375 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1670 |
| CciI | TCATGA | 1 cut(s) | 1759 |
| CfoI | GCGC | 1 cut(s) | 91 |
| Cfr10I | RCCGGY | 1 cut(s) | 1464 |
| Cfr13I | GGNCC | 1 cut(s) | 1809 |
| CseI | GACGC | 1 cut(s) | 800 |
| CsiI | ACCWGGT | 1 cut(s) | 156 |
| Csp6I | GTAC | 4 cut(s) | 585, 629, 657, 703 |
| CviQI | GTAC | 4 cut(s) | 585, 629, 657, 703 |
| DdeI | CTNAG | 2 cut(s) | 999, 1260 |
| DpnI | GATC | 2 cut(s) | 217, 1743 |
| DpnII | GATC | 2 cut(s) | 215, 1741 |
| DraI | TTTAAA | 2 cut(s) | 442, 1630 |
| EaeI | YGGCCR | 1 cut(s) | 1838 |
| Eam1104I | CTCTTC | 5 cut(s) | 65, 666, 873, 1032, 1578 |
| EarI | CTCTTC | 5 cut(s) | 65, 666, 873, 1032, 1578 |
| Eco130I | CCWWGG | 6 cut(s) | 447, 515, 855, 955, 1088, 1831 |
| Eco147I | AGGCCT | 2 cut(s) | 121, 990 |
| Eco57I | CTGAAG | 6 cut(s) | 129, 513, 1056, 1128, 1403, 1698 |
| Eco72I | CACGTG | 1 cut(s) | 668 |
| Eco81I | CCTNAGG | 1 cut(s) | 999 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 126 |
| EcoRI | GAATTC | 1 cut(s) | 294 |
| EcoRII | CCWGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| EcoT14I | CCWWGG | 6 cut(s) | 447, 515, 855, 955, 1088, 1831 |
| EcoT22I | ATGCAT | 1 cut(s) | 1075 |
| ErhI | CCWWGG | 6 cut(s) | 447, 515, 855, 955, 1088, 1831 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 508, 540, 753, 785, 914, 946, 1502, 1534 |
| FbaI | TGATCA | 1 cut(s) | 1741 |
| FblI | GTMKAC | 1 cut(s) | 1686 |
| Fnu4HI | GCNGC | 4 cut(s) | 1371, 1569, 1827, 1838 |
| FokI | GGATG | 5 cut(s) | 17, 203, 374, 413, 818 |
| Fsp4HI | GCNGC | 4 cut(s) | 1371, 1569, 1827, 1838 |
| FspBI | CTAG | 4 cut(s) | 287, 743, 1089, 1782 |
| GlaI | GCGC | 1 cut(s) | 90 |
| GluI | GCNGC | 4 cut(s) | 1371, 1569, 1827, 1838 |
| GsuI | CTGGAG | 1 cut(s) | 1002 |
| HaeII | RGCGCY | 1 cut(s) | 92 |
| HaeIII | GGCC | 6 cut(s) | 121, 990, 1093, 1478, 1810, 1840 |
| HapII | CCGG | 1 cut(s) | 1465 |
| HgaI | GACGC | 1 cut(s) | 800 |
| HhaI | GCGC | 1 cut(s) | 91 |
| Hin1I | GRCGYC | 1 cut(s) | 811 |
| Hin6I | GCGC | 1 cut(s) | 89 |
| HinP1I | GCGC | 1 cut(s) | 89 |
| HincII | GTYRAC | 1 cut(s) | 1548 |
| HindII | GTYRAC | 1 cut(s) | 1548 |
| HinfI | GANTC | 3 cut(s) | 206, 1730, 1754 |
| HpaII | CCGG | 1 cut(s) | 1465 |
| HphI | GGTGA | 9 cut(s) | 127, 143, 326, 368, 572, 685, 857, 1712, 1751 |
| Hpy166II | GTNNAC | 3 cut(s) | 775, 1548, 1687 |
| Hpy188I | TCNGA | 7 cut(s) | 148, 220, 625, 816, 1362, 1735, 1750 |
| Hpy188III | TCNNGA | 9 cut(s) | 213, 641, 743, 833, 872, 981, 1064, 1106, 1760 |
| Hpy8I | GTNNAC | 3 cut(s) | 775, 1548, 1687 |
| HpyCH4III | ACNGT | 3 cut(s) | 178, 1489, 1739 |
| HpyCH4IV | ACGT | 4 cut(s) | 583, 667, 886, 1365 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 796, 1568, 1775 |
| HpyF3I | CTNAG | 2 cut(s) | 999, 1260 |
| HpySE526I | ACGT | 4 cut(s) | 583, 667, 886, 1365 |
| Hsp92I | GRCGYC | 1 cut(s) | 811 |
| HspAI | GCGC | 1 cut(s) | 89 |
| KpnI | GGTACC | 1 cut(s) | 632 |
| Ksp22I | TGATCA | 1 cut(s) | 1741 |
| Kzo9I | GATC | 2 cut(s) | 215, 1741 |
| LguI | GCTCTTC | 1 cut(s) | 1578 |
| LmnI | GCTCC | 2 cut(s) | 385, 766 |
| Lsp1109I | GCAGC | 3 cut(s) | 1357, 1555, 1838 |
| LweI | GCATC | 5 cut(s) | 124, 1143, 1549, 1765, 1835 |
| MabI | ACCWGGT | 1 cut(s) | 156 |
| MaeI | CTAG | 4 cut(s) | 287, 743, 1089, 1782 |
| MaeII | ACGT | 4 cut(s) | 583, 667, 886, 1365 |
| MaeIII | GTNAC | 7 cut(s) | 560, 577, 691, 791, 1051, 1353, 1514 |
| MalI | GATC | 2 cut(s) | 217, 1743 |
| MboI | GATC | 2 cut(s) | 215, 1741 |
| MflI | RGATCY | 1 cut(s) | 215 |
| MhlI | GDGCHC | 1 cut(s) | 1117 |
| MmeI | TCCRAC | 3 cut(s) | 323, 603, 1471 |
| Mph1103I | ATGCAT | 1 cut(s) | 1075 |
| MroXI | GAANNNNTTC | 2 cut(s) | 294, 750 |
| MseI | TTAA | 8 cut(s) | 441, 609, 707, 819, 1293, 1302, 1533, 1629 |
| MslI | CAYNNNNRTG | 2 cut(s) | 354, 1713 |
| MspA1I | CMGCKG | 1 cut(s) | 1568 |
| MspI | CCGG | 1 cut(s) | 1465 |
| MspR9I | CCNGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| MvaI | CCWGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 796, 1568, 1775 |
| NcoI | CCATGG | 2 cut(s) | 855, 955 |
| NdeII | GATC | 2 cut(s) | 215, 1741 |
| NlaIV | GGNNCC | 4 cut(s) | 19, 522, 630, 1032 |
| NmuCI | GTSAC | 5 cut(s) | 560, 691, 791, 1051, 1514 |
| NsiI | ATGCAT | 1 cut(s) | 1075 |
| NspI | RCATGY | 7 cut(s) | 254, 799, 907, 1059, 1377, 1419, 1451 |
| PaeI | GCATGC | 2 cut(s) | 907, 1377 |
| PagI | TCATGA | 1 cut(s) | 1759 |
| PaqCI | CACCTGC | 1 cut(s) | 1688 |
| PceI | AGGCCT | 2 cut(s) | 121, 990 |
| PciI | ACATGT | 3 cut(s) | 250, 1055, 1447 |
| PciSI | GCTCTTC | 1 cut(s) | 1578 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 829 |
| PdmI | GAANNNNTTC | 2 cut(s) | 294, 750 |
| PfeI | GAWTC | 3 cut(s) | 206, 1730, 1754 |
| PkrI | GCNGC | 4 cut(s) | 1372, 1570, 1828, 1839 |
| PmaCI | CACGTG | 1 cut(s) | 668 |
| PmlI | CACGTG | 1 cut(s) | 668 |
| Ppu21I | YACGTR | 3 cut(s) | 584, 668, 887 |
| PscI | ACATGT | 3 cut(s) | 250, 1055, 1447 |
| Psp6I | CCWGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| PspCI | CACGTG | 1 cut(s) | 668 |
| PspGI | CCWGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| PspN4I | GGNNCC | 4 cut(s) | 19, 522, 630, 1032 |
| PspPI | GGNCC | 1 cut(s) | 1809 |
| PstI | CTGCAG | 1 cut(s) | 1699 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1670 |
| PsuI | RGATCY | 1 cut(s) | 215 |
| PvuII | CAGCTG | 1 cut(s) | 1568 |
| RsaI | GTAC | 4 cut(s) | 586, 630, 658, 704 |
| RsaNI | GTAC | 4 cut(s) | 585, 629, 657, 703 |
| RseI | CAYNNNNRTG | 2 cut(s) | 354, 1713 |
| SapI | GCTCTTC | 1 cut(s) | 1578 |
| SaqAI | TTAA | 8 cut(s) | 441, 609, 707, 819, 1293, 1302, 1533, 1629 |
| SatI | GCNGC | 4 cut(s) | 1371, 1569, 1827, 1838 |
| Sau3AI | GATC | 2 cut(s) | 215, 1741 |
| Sau96I | GGNCC | 1 cut(s) | 1809 |
| ScaI | AGTACT | 1 cut(s) | 704 |
| ScrFI | CCNGG | 7 cut(s) | 93, 123, 158, 541, 1443, 1653, 1842 |
| SduI | GDGCHC | 1 cut(s) | 1117 |
| SexAI | ACCWGGT | 1 cut(s) | 156 |
| SfaNI | GCATC | 5 cut(s) | 124, 1143, 1549, 1765, 1835 |
| SfcI | CTRYAG | 2 cut(s) | 57, 1695 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 354, 1713 |
| SmlI | CTYRAG | 3 cut(s) | 342, 588, 641 |
| SmoI | CTYRAG | 3 cut(s) | 342, 588, 641 |
| SphI | GCATGC | 2 cut(s) | 907, 1377 |
| SseBI | AGGCCT | 2 cut(s) | 121, 990 |
| SsiI | CCGC | 4 cut(s) | 731, 1618, 1767, 1837 |
| SspI | AATATT | 1 cut(s) | 1332 |
| SspMI | CTAG | 4 cut(s) | 287, 743, 1089, 1782 |
| StuI | AGGCCT | 2 cut(s) | 121, 990 |
| StyD4I | CCNGG | 7 cut(s) | 91, 121, 156, 539, 1441, 1651, 1840 |
| StyI | CCWWGG | 6 cut(s) | 447, 515, 855, 955, 1088, 1831 |
| TaaI | ACNGT | 3 cut(s) | 178, 1489, 1739 |
| TaiI | ACGT | 4 cut(s) | 586, 670, 889, 1368 |
| TaqI | TCGA | 1 cut(s) | 1500 |
| TatI | WGTACW | 1 cut(s) | 702 |
| TauI | GCSGC | 1 cut(s) | 1840 |
| TfiI | GAWTC | 3 cut(s) | 206, 1730, 1754 |
| Tru1I | TTAA | 8 cut(s) | 441, 609, 707, 819, 1293, 1302, 1533, 1629 |
| Tru9I | TTAA | 8 cut(s) | 441, 609, 707, 819, 1293, 1302, 1533, 1629 |
| TscAI | CASTG | 1 cut(s) | 117 |
| TseFI | GTSAC | 5 cut(s) | 560, 691, 791, 1051, 1514 |
| TseI | GCWGC | 3 cut(s) | 1370, 1568, 1826 |
| Tsp45I | GTSAC | 5 cut(s) | 560, 691, 791, 1051, 1514 |
| TspDTI | ATGAA | 8 cut(s) | 119, 350, 401, 420, 543, 743, 930, 1776 |
| TspGWI | ACGGA | 1 cut(s) | 579 |
| TspRI | CASTG | 1 cut(s) | 117 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 126 |
| XapI | RAATTY | 4 cut(s) | 294, 1289, 1348, 1535 |
| XbaI | TCTAGA | 1 cut(s) | 742 |
| XceI | RCATGY | 7 cut(s) | 254, 799, 907, 1059, 1377, 1419, 1451 |
| XmaJI | CCTAGG | 1 cut(s) | 1088 |
| XmiI | GTMKAC | 1 cut(s) | 1686 |
| XmnI | GAANNNNTTC | 2 cut(s) | 294, 750 |
| XspI | CTAG | 4 cut(s) | 287, 743, 1089, 1782 |
| ZrmI | AGTACT | 1 cut(s) | 704 |
| Zsp2I | ATGCAT | 1 cut(s) | 1075 |