Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0012487

Physical Location & Seq

Genomic Coordinates Reverse (-)

23626538 .. 23631368

Gene Structure 4831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1148000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGTTGACCTCCTCTCCTGCTTCTCTCTCTATAAATCCCTCTCTCTCTCCTCCCTCCTTTTCGGCATCCACCACCCAATCATCTGCCTTTTGTCCTCCCCTCAGATTCCCAGGCGGCCAATCCTCGCGAACAAAACCCAGTAGCCTTTGGACTCAAGGTGTTCGATTGTGTGCCTCCGAGAGACCAAAAAGTAGAAAACTTGAGCTTAAAGCCAGCGACATGACAATTACAGAGGTCGAGATAGAGGAAAAGGAAGTGGAAGAGGGTCCTCCTCCATATGTTGAGTCGGAGATTAATTCCAGACCTCGTCGCATTGCTCTCTTTGTTGAGCCTTCTCCCTTTGCATATGTGTCAGGTTATAAAAATCGGTTCCAGAATTTCATTAGATACTTGCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACCCACGAAGGAGTCCCTGACGAATTTTATGGAGCAAAATTGATTGGATCCCGAAGCTTTCCCTGCCCCTTGTATCAAAAGGTGCCCCTTTCCCTTGCACTTAGTCCTAGAATAATTTCGGAGGTTGCTCAGTTCAAGCCTGACATTATACATGCATCCTCGCCTGGAATTATGGTTTTTGGCGCGCTCATTATCGCTAAGTTGTTATCTGTCCCCATAGTGATGTCGTATCACACTCATGTGCCAGTATATATCCCGAGATACACCTTCAGTTGGCTGGTGAAACCCATGTGGTTGGTCATAAAATTTCTGCACAGAGCTGCTGATCTCACACTAGTGCCATCAGCTGCAATCAGTAAGGATCTCCTAGAAGCTGGGGTGGCCGCAGCTAATACAATCCGTCTTTGGAATAAAGGTGTTGATTCTGAAAGCTTCAATCCCCGCTTCCGTTCTCATGAAATGCGCATAAGACTGAGCAATGGCGAACCTGAGAAACCTTTAATTGTTCATGTTGGAAGACTTGGAGTGGAGAAGAGTTTGGATTTTCTGAAAAGTGTCATGGATCGGCTTCCCGAAGCACGAATTGCTTTCATTGGAGATGGACCATACAGGGAGGATCTGGAAAAACTGTTTGAAGGCATGCCCGCGGTATTTACAGGAATGTTAGGAGGTGAAGAGCTCTCTCAGGCATATGCCAGTGGTGACGTTTTTGTGATGCCTTCAGAATCAGAGACACTAGGGCTTGTTGTATTGGAGGCTATGTCTTCAGGTATCCCTGTGGTGGGAGCTCGTGCTGGTGGAATCCCAGATATAATTCCGGCAGATCAGGAGGGGAAAACTGGCTTTCTCTACGATTACAATGACCTTGATGACTGCTTAAGTAAGTTGCAGCCCCTGCTGGAGAACAAGGAATTAAGGGAAACAATTGGCAGGGCAGCGCGTGAGGAAATGGAGAAGTACGATTGGAAAGCAGCCACGCGAGTAATTCGAAATGAGCAATACAGTGACGCCATTTGGTTCTGGAGGAAGAAGAGAGCGCAATTTCTGAGACCGTTGCAGTGGTTCATGAAGCGCATCTTTCCTCCAACCACACCAGAAATCAAGTACAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006790 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008610 GO:0009058 GO:0009247 GO:0009267 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009941 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031975 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046505 GO:0046506 GO:0050896 GO:0051716 GO:0070085 GO:0071496 GO:0071704 GO:0097502 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

513

Amino Acids

57.48

Weight (kDa)

7.65

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_4	PF13439	119 - 285	4.2e-27	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	119 - 274	2.2e-16	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	304 - 457	1.2e-27	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	308 - 444	5e-26	Glycosyl transferases group 1
Glyco_trans_1_2	PF13524	324 - 464	5.1e-10	Glycosyl transferase-like
GT4-conflict	PF20706	367 - 469	6.7e-08	Family 4 Glycosyltransferase in conflict systems

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01220 AT5G01220
fragaria_vesca	FvH4_6g11930
malus_domestica	MD04G1148000.v1.1 MD12G1161400.v1.1
prunus_persica	Prupe.6G271800_v2.0.a1
pyrus_communis	pycom04g13380 pycom12g15320
rosa_chinensis	RchiOBHm_Chr3g0463701
rosa_laevigata	RLG00000024763
rosa_multiflora	Rmu_sc0003267.1_g000033
rosa_roxburghii	Rroxscaffold_6G00416360
rosa_rugosa	Rorug03G0067000 Rorug03G0067100
rosa_samantha	Rh3AG124100 Rh3BG128700 Rh3CG130900 Rh3DG129300
rosa_wichuraiana	Rw3G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	360
Acc16I	TGCGCA	1 cut(s)	890
AccB1I	GGYRCC	1 cut(s)	508
AccII	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
AciI	CCGC	5 cut(s)	114, 810, 868, 1071, 1073
AclWI	GGATC	5 cut(s)	468, 481, 795, 996, 1050
AcoI	YGGCCR	2 cut(s)	115, 807
AcsI	RAATTY	3 cut(s)	376, 449, 731
AcuI	CTGAAG	3 cut(s)	679, 1131, 1176
AcyI	GRCGYC	1 cut(s)	1434
AfaI	GTAC	2 cut(s)	1385, 1532
AfiI	CCNNNNNNNGG	3 cut(s)	699, 1207, 1208
AflII	CTTAAG	1 cut(s)	1303
AgsI	TTSAA	3 cut(s)	562, 862, 1061
AhlI	ACTAGT	1 cut(s)	760
AjnI	CCWGG	2 cut(s)	109, 589
AleI	CACNNNNGTG	2 cut(s)	665, 761
AluBI	AGCT	9 cut(s)	205, 483, 746, 773, 800, 815, 858, 1105, 1214
AluI	AGCT	9 cut(s)	205, 483, 746, 773, 800, 815, 858, 1105, 1214
Alw21I	GWGCWC	2 cut(s)	1107, 1216
Alw26I	GTCTC	3 cut(s)	175, 1151, 1468
AlwI	GGATC	5 cut(s)	468, 481, 795, 996, 1050
AlwNI	CAGNNNCTG	1 cut(s)	1321
Ama87I	CYCGRG	1 cut(s)	682
AoxI	GGCC	2 cut(s)	115, 807
ApeKI	GCWGC	6 cut(s)	746, 773, 812, 1315, 1361, 1397
ApoI	RAATTY	3 cut(s)	376, 449, 731
AseI	ATTAAT	1 cut(s)	294
Asp700I	GAANNNNTTC	1 cut(s)	541
AspLEI	GCGC	6 cut(s)	611, 613, 891, 1366, 1465, 1500
AspS9I	GGNCC	2 cut(s)	266, 1028
AsuHPI	GGTGA	4 cut(s)	424, 718, 1109, 1139
AsuII	TTCGAA	1 cut(s)	1414
AvaI	CYCGRG	1 cut(s)	682
AvaII	GGWCC	2 cut(s)	266, 1028
BaeGI	GKGCMC	1 cut(s)	513
BaeI	ACNNNNGTAYC	2 cut(s)	379, 412
BamHI	GGATCC	1 cut(s)	473
BanI	GGYRCC	1 cut(s)	508
BanII	GRGCYC	2 cut(s)	1107, 1216
BauI	CACGAG	1 cut(s)	1215
BbsI	GAAGAC	2 cut(s)	949, 1182
Bbv12I	GWGCWC	2 cut(s)	1107, 1216
BbvI	GCAGC	6 cut(s)	733, 760, 824, 1327, 1373, 1409
BccI	CCATC	3 cut(s)	409, 775, 1019
BciT130I	CCWGG	2 cut(s)	111, 591
BciVI	GTATCC	1 cut(s)	1208
BcoDI	GTCTC	3 cut(s)	175, 1151, 1468
BcuI	ACTAGT	1 cut(s)	760
BfaI	CTAG	4 cut(s)	534, 761, 794, 1163
BfrI	CTTAAG	1 cut(s)	1303
BfuI	GTATCC	1 cut(s)	1208
BisI	GCNGC	8 cut(s)	115, 747, 774, 810, 813, 1316, 1362, 1398
BlsI	GCNGC	8 cut(s)	116, 748, 775, 811, 814, 1317, 1363, 1399
Bme1390I	CCNGG	2 cut(s)	111, 591
Bme18I	GGWCC	2 cut(s)	266, 1028
BmeT110I	CYCGRG	1 cut(s)	682
BmgT120I	GGNCC	2 cut(s)	266, 1028
BmiI	GGNNCC	4 cut(s)	267, 371, 475, 510
BmrFI	CCNGG	2 cut(s)	111, 591
BmrI	ACTGGG	1 cut(s)	132
BmsI	GCATC	4 cut(s)	74, 590, 1131, 1509
BmuI	ACTGGG	1 cut(s)	132
BpiI	GAAGAC	2 cut(s)	949, 1182
BpmI	CTGGAG	2 cut(s)	1346, 1468
Bpu14I	TTCGAA	1 cut(s)	1414
BpuEI	CTTGAG	2 cut(s)	138, 221
BsaHI	GRCGYC	1 cut(s)	1434
BsaI	GGTCTC	2 cut(s)	175, 1468
BsaJI	CCNNGG	2 cut(s)	109, 1071
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 1172, 1202
Bsc4I	CCNNNNNNNGG	3 cut(s)	699, 1207, 1208
Bse1I	ACTGG	4 cut(s)	138, 671, 1122, 1270
Bse3DI	GCAATG	2 cut(s)	312, 910
BseBI	CCWGG	2 cut(s)	111, 591
BseDI	CCNNGG	2 cut(s)	109, 1071
BseGI	GGATG	3 cut(s)	65, 412, 581
BseLI	CCNNNNNNNGG	3 cut(s)	699, 1207, 1208
BseMI	GCAATG	2 cut(s)	312, 910
BseMII	CTCAG	6 cut(s)	115, 569, 890, 906, 1124, 1463
BseNI	ACTGG	4 cut(s)	138, 671, 1122, 1270
BsePI	GCGCGC	1 cut(s)	609
BseRI	GAGGAG	2 cut(s)	39, 261
BseSI	GKGCMC	1 cut(s)	513
BseXI	GCAGC	6 cut(s)	733, 760, 824, 1327, 1373, 1409
BseYI	CCCAGC	1 cut(s)	800
BsgI	GTGCAG	1 cut(s)	722
Bsh1236I	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
BshFI	GGCC	2 cut(s)	117, 809
BshNI	GGYRCC	1 cut(s)	508
BsiHKAI	GWGCWC	2 cut(s)	1107, 1216
BsiHKCI	CYCGRG	1 cut(s)	682
BsiSI	CCGG	1 cut(s)	1244
BslFI	GGGAC	2 cut(s)	425, 623
BslI	CCNNNNNNNGG	3 cut(s)	699, 1207, 1208
BsmAI	GTCTC	3 cut(s)	175, 1151, 1468
BsmFI	GGGAC	2 cut(s)	425, 623
BsnI	GGCC	2 cut(s)	117, 809
Bso31I	GGTCTC	2 cut(s)	175, 1468
BsoBI	CYCGRG	1 cut(s)	682
Bsp119I	TTCGAA	1 cut(s)	1414
Bsp1286I	GDGCHC	3 cut(s)	513, 1107, 1216
Bsp143I	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
Bsp68I	TCGCGA	1 cut(s)	127
BspACI	CCGC	5 cut(s)	114, 810, 868, 1071, 1073
BspANI	GGCC	2 cut(s)	117, 809
BspCNI	CTCAG	6 cut(s)	114, 568, 891, 907, 1123, 1464
BspFNI	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
BspHI	TCATGA	2 cut(s)	880, 1491
BspLI	GGNNCC	4 cut(s)	267, 371, 475, 510
BspPI	GGATC	5 cut(s)	468, 481, 795, 996, 1050
BspQI	GCTCTTC	1 cut(s)	1095
BspT104I	TTCGAA	1 cut(s)	1414
BspT107I	GGYRCC	1 cut(s)	508
BspTI	CTTAAG	1 cut(s)	1303
BspTNI	GGTCTC	2 cut(s)	175, 1468
BsrDI	GCAATG	2 cut(s)	312, 910
BsrI	ACTGG	4 cut(s)	138, 671, 1122, 1270
BssECI	CCNNGG	2 cut(s)	109, 1071
BssHII	GCGCGC	1 cut(s)	609
BssMI	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
BssNI	GRCGYC	1 cut(s)	1434
BssSI	CACGAG	1 cut(s)	1215
Bst2BI	CACGAG	1 cut(s)	1215
Bst2UI	CCWGG	2 cut(s)	111, 591
Bst4CI	ACNGT	3 cut(s)	1056, 1430, 1479
Bst6I	CTCTTC	4 cut(s)	255, 953, 1095, 1451
BstACI	GRCGYC	1 cut(s)	1434
BstAFI	CTTAAG	1 cut(s)	1303
BstAPI	GCANNNNNTGC	2 cut(s)	1010, 1321
BstBI	TTCGAA	1 cut(s)	1414
BstC8I	GCNNGC	4 cut(s)	214, 611, 1067, 1071
BstDEI	CTNAG	8 cut(s)	101, 527, 555, 624, 899, 915, 1110, 1472
BstDSI	CCRYGG	1 cut(s)	1071
BstF5I	GGATG	3 cut(s)	65, 412, 581
BstFNI	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
BstHHI	GCGC	6 cut(s)	611, 613, 891, 1366, 1465, 1500
BstKTI	GATC	6 cut(s)	476, 754, 790, 991, 1045, 1252
BstMAI	GTCTC	3 cut(s)	175, 1151, 1468
BstMBI	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
BstMWI	GCNNNNNNNGC	4 cut(s)	489, 806, 1010, 1321
BstNI	CCWGG	2 cut(s)	111, 591
BstNSI	RCATGY	2 cut(s)	581, 1069
BstSCI	CCNGG	2 cut(s)	109, 589
BstSLI	GKGCMC	1 cut(s)	513
BstUI	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
BstV1I	GCAGC	6 cut(s)	733, 760, 824, 1327, 1373, 1409
BstV2I	GAAGAC	2 cut(s)	949, 1182
BstX2I	RGATCY	3 cut(s)	473, 787, 1042
BstXI	CCANNNNNNTGG	1 cut(s)	721
BstYI	RGATCY	3 cut(s)	473, 787, 1042
BsuI	GTATCC	1 cut(s)	1208
BsuRI	GGCC	2 cut(s)	117, 809
BtgI	CCRYGG	1 cut(s)	1071
BtsCI	GGATG	3 cut(s)	65, 412, 581
BtsI	GCAGTG	1 cut(s)	1490
BtsIMutI	CAGTG	3 cut(s)	1129, 1435, 1490
BtuMI	TCGCGA	1 cut(s)	127
Cac8I	GCNNGC	4 cut(s)	214, 611, 1067, 1071
CaiI	CAGNNNCTG	1 cut(s)	1321
CciI	TCATGA	2 cut(s)	880, 1491
CfoI	GCGC	6 cut(s)	611, 613, 891, 1366, 1465, 1500
Cfr13I	GGNCC	2 cut(s)	266, 1028
Cfr42I	CCGCGG	1 cut(s)	1074
CseI	GACGC	1 cut(s)	1442
Csp6I	GTAC	2 cut(s)	1384, 1531
CviAII	CATG	9 cut(s)	220, 578, 665, 715, 881, 935, 985, 1066, 1492
CviQI	GTAC	2 cut(s)	1384, 1531
DdeI	CTNAG	8 cut(s)	101, 527, 555, 624, 899, 915, 1110, 1472
DpnI	GATC	6 cut(s)	475, 753, 789, 990, 1044, 1251
DpnII	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
EaeI	YGGCCR	2 cut(s)	115, 807
Eam1104I	CTCTTC	4 cut(s)	255, 953, 1095, 1451
EarI	CTCTTC	4 cut(s)	255, 953, 1095, 1451
Ecl136II	GAGCTC	2 cut(s)	1105, 1214
Eco24I	GRGCYC	2 cut(s)	1107, 1216
Eco31I	GGTCTC	2 cut(s)	175, 1468
Eco47I	GGWCC	2 cut(s)	266, 1028
Eco53kI	GAGCTC	2 cut(s)	1105, 1214
Eco57I	CTGAAG	3 cut(s)	679, 1131, 1176
Eco88I	CYCGRG	1 cut(s)	682
EcoICRI	GAGCTC	2 cut(s)	1105, 1214
EcoO109I	RGGNCCY	1 cut(s)	266
EcoRII	CCWGG	2 cut(s)	109, 589
EcoT22I	ATGCAT	1 cut(s)	583
EcoT38I	GRGCYC	2 cut(s)	1107, 1216
FaeI	CATG	9 cut(s)	223, 581, 668, 718, 884, 938, 988, 1069, 1495
FalI	AAGNNNNNCTT	2 cut(s)	1487, 1519
FaqI	GGGAC	2 cut(s)	425, 623
FatI	CATG	9 cut(s)	219, 577, 664, 714, 880, 934, 984, 1065, 1491
FauI	CCCGC	2 cut(s)	875, 1078
FauNDI	CATATG	3 cut(s)	277, 346, 1117
Fnu4HI	GCNGC	8 cut(s)	115, 747, 774, 810, 813, 1316, 1362, 1398
FokI	GGATG	3 cut(s)	52, 419, 568
FriOI	GRGCYC	2 cut(s)	1107, 1216
Fsp4HI	GCNGC	8 cut(s)	115, 747, 774, 810, 813, 1316, 1362, 1398
FspAI	RTGCGCAY	1 cut(s)	890
FspBI	CTAG	4 cut(s)	534, 761, 794, 1163
FspI	TGCGCA	1 cut(s)	890
GlaI	GCGC	6 cut(s)	610, 612, 890, 1365, 1464, 1499
GluI	GCNGC	8 cut(s)	115, 747, 774, 810, 813, 1316, 1362, 1398
GsaI	CCCAGC	1 cut(s)	804
GsuI	CTGGAG	2 cut(s)	1346, 1468
HaeIII	GGCC	2 cut(s)	117, 809
HapII	CCGG	1 cut(s)	1244
HgaI	GACGC	1 cut(s)	1442
HhaI	GCGC	6 cut(s)	611, 613, 891, 1366, 1465, 1500
Hin1I	GRCGYC	1 cut(s)	1434
Hin1II	CATG	9 cut(s)	223, 581, 668, 718, 884, 938, 988, 1069, 1495
Hin6I	GCGC	6 cut(s)	609, 611, 889, 1364, 1463, 1498
HinP1I	GCGC	6 cut(s)	609, 611, 889, 1364, 1463, 1498
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	2 cut(s)	481, 856
HinfI	GANTC	7 cut(s)	105, 151, 284, 438, 848, 1151, 1227
HpaII	CCGG	1 cut(s)	1244
HphI	GGTGA	4 cut(s)	424, 718, 1109, 1139
Hpy166II	GTNNAC	1 cut(s)	6
Hpy188I	TCNGA	9 cut(s)	104, 178, 289, 547, 853, 975, 1150, 1156, 1473
Hpy8I	GTNNAC	1 cut(s)	6
Hpy99I	CGWCG	1 cut(s)	312
HpyAV	CCTTC	5 cut(s)	342, 428, 703, 1055, 1155
HpyCH4III	ACNGT	3 cut(s)	1056, 1430, 1479
HpyCH4IV	ACGT	1 cut(s)	1131
HpyCH4V	TGCA	7 cut(s)	344, 524, 581, 739, 776, 1315, 1483
HpyF10VI	GCNNNNNNNGC	4 cut(s)	489, 806, 1010, 1321
HpyF3I	CTNAG	8 cut(s)	101, 527, 555, 624, 899, 915, 1110, 1472
HpySE526I	ACGT	1 cut(s)	1131
Hsp92I	GRCGYC	1 cut(s)	1434
Hsp92II	CATG	9 cut(s)	223, 581, 668, 718, 884, 938, 988, 1069, 1495
HspAI	GCGC	6 cut(s)	609, 611, 889, 1364, 1463, 1498
KspI	CCGCGG	1 cut(s)	1074
Kzo9I	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
LguI	GCTCTTC	1 cut(s)	1095
LmnI	GCTCC	2 cut(s)	458, 1211
Lsp1109I	GCAGC	6 cut(s)	733, 760, 824, 1327, 1373, 1409
LweI	GCATC	4 cut(s)	74, 590, 1131, 1509
MaeI	CTAG	4 cut(s)	534, 761, 794, 1163
MaeII	ACGT	1 cut(s)	1131
MaeIII	GTNAC	3 cut(s)	421, 1127, 1430
MalI	GATC	6 cut(s)	475, 753, 789, 990, 1044, 1251
MboI	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
MboII	GAAGA	7 cut(s)	272, 954, 970, 1112, 1182, 1465, 1468
MfeI	CAATTG	1 cut(s)	1350
MflI	RGATCY	3 cut(s)	473, 787, 1042
MhlI	GDGCHC	3 cut(s)	513, 1107, 1216
MlyI	GAGTC	3 cut(s)	145, 293, 447
MmeI	TCCRAC	3 cut(s)	267, 919, 1535
Mph1103I	ATGCAT	1 cut(s)	583
MroXI	GAANNNNTTC	1 cut(s)	541
MseI	TTAA	5 cut(s)	207, 294, 926, 1304, 1340
MslI	CAYNNNNRTG	4 cut(s)	647, 663, 665, 761
MspA1I	CMGCKG	2 cut(s)	773, 1073
MspCI	CTTAAG	1 cut(s)	1303
MspI	CCGG	1 cut(s)	1244
MspR9I	CCNGG	2 cut(s)	111, 591
MunI	CAATTG	1 cut(s)	1350
MvaI	CCWGG	2 cut(s)	111, 591
MvnI	CGCG	5 cut(s)	127, 611, 1073, 1366, 1405
MwoI	GCNNNNNNNGC	4 cut(s)	489, 806, 1010, 1321
NdeI	CATATG	3 cut(s)	277, 346, 1117
NdeII	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
NlaIII	CATG	9 cut(s)	223, 581, 668, 718, 884, 938, 988, 1069, 1495
NlaIV	GGNNCC	4 cut(s)	267, 371, 475, 510
NmuCI	GTSAC	3 cut(s)	421, 1127, 1430
NruI	TCGCGA	1 cut(s)	127
NsbI	TGCGCA	1 cut(s)	890
NsiI	ATGCAT	1 cut(s)	583
NspI	RCATGY	2 cut(s)	581, 1069
NspV	TTCGAA	1 cut(s)	1414
OliI	CACNNNNGTG	2 cut(s)	665, 761
PaeI	GCATGC	1 cut(s)	1069
PagI	TCATGA	2 cut(s)	880, 1491
PauI	GCGCGC	1 cut(s)	609
PciSI	GCTCTTC	1 cut(s)	1095
PdmI	GAANNNNTTC	1 cut(s)	541
PfeI	GAWTC	4 cut(s)	105, 848, 1151, 1227
PflFI	GACNNNGTC	1 cut(s)	306
PkrI	GCNGC	8 cut(s)	116, 748, 775, 811, 814, 1317, 1363, 1399
PleI	GAGTC	3 cut(s)	145, 292, 446
PpsI	GAGTC	3 cut(s)	145, 292, 446
PpuMI	RGGWCCY	1 cut(s)	266
PshBI	ATTAAT	1 cut(s)	294
PsiI	TTATAA	1 cut(s)	360
Psp124BI	GAGCTC	2 cut(s)	1107, 1216
Psp5II	RGGWCCY	1 cut(s)	266
Psp6I	CCWGG	2 cut(s)	109, 589
PspFI	CCCAGC	1 cut(s)	800
PspGI	CCWGG	2 cut(s)	109, 589
PspN4I	GGNNCC	4 cut(s)	267, 371, 475, 510
PspPI	GGNCC	2 cut(s)	266, 1028
PspPPI	RGGWCCY	1 cut(s)	266
PstNI	CAGNNNCTG	1 cut(s)	1321
PsuI	RGATCY	3 cut(s)	473, 787, 1042
PsyI	GACNNNGTC	1 cut(s)	306
PteI	GCGCGC	1 cut(s)	609
PvuII	CAGCTG	1 cut(s)	773
RruI	TCGCGA	1 cut(s)	127
RsaI	GTAC	2 cut(s)	1385, 1532
RsaNI	GTAC	2 cut(s)	1384, 1531
RseI	CAYNNNNRTG	4 cut(s)	647, 663, 665, 761
SacI	GAGCTC	2 cut(s)	1107, 1216
SacII	CCGCGG	1 cut(s)	1074
SapI	GCTCTTC	1 cut(s)	1095
SaqAI	TTAA	5 cut(s)	207, 294, 926, 1304, 1340
SatI	GCNGC	8 cut(s)	115, 747, 774, 810, 813, 1316, 1362, 1398
Sau3AI	GATC	6 cut(s)	473, 751, 787, 988, 1042, 1249
Sau96I	GGNCC	2 cut(s)	266, 1028
SchI	GAGTC	3 cut(s)	145, 293, 447
ScrFI	CCNGG	2 cut(s)	111, 591
SduI	GDGCHC	3 cut(s)	513, 1107, 1216
SfaNI	GCATC	4 cut(s)	74, 590, 1131, 1509
Sfr303I	CCGCGG	1 cut(s)	1074
SfuI	TTCGAA	1 cut(s)	1414
SgrBI	CCGCGG	1 cut(s)	1074
SinI	GGWCC	2 cut(s)	266, 1028
SmiMI	CAYNNNNRTG	4 cut(s)	647, 663, 665, 761
SmlI	CTYRAG	3 cut(s)	153, 200, 1303
SmoI	CTYRAG	3 cut(s)	153, 200, 1303
SpeI	ACTAGT	1 cut(s)	760
SphI	GCATGC	1 cut(s)	1069
SsiI	CCGC	5 cut(s)	114, 810, 868, 1071, 1073
SspMI	CTAG	4 cut(s)	534, 761, 794, 1163
SstI	GAGCTC	2 cut(s)	1107, 1216
StyD4I	CCNGG	2 cut(s)	109, 589
TaaI	ACNGT	3 cut(s)	1056, 1430, 1479
TaiI	ACGT	1 cut(s)	1134
TaqI	TCGA	3 cut(s)	163, 237, 1414
TatI	WGTACW	1 cut(s)	1530
TauI	GCSGC	2 cut(s)	117, 812
TfiI	GAWTC	4 cut(s)	105, 848, 1151, 1227
Tru1I	TTAA	5 cut(s)	207, 294, 926, 1304, 1340
Tru9I	TTAA	5 cut(s)	207, 294, 926, 1304, 1340
TscAI	CASTG	3 cut(s)	1129, 1435, 1490
TseFI	GTSAC	3 cut(s)	421, 1127, 1430
TseI	GCWGC	6 cut(s)	746, 773, 812, 1315, 1361, 1397
Tsp45I	GTSAC	3 cut(s)	421, 1127, 1430
TspDTI	ATGAA	6 cut(s)	370, 897, 923, 1006, 1480, 1508
TspGWI	ACGGA	2 cut(s)	815, 863
TspRI	CASTG	3 cut(s)	1129, 1435, 1490
Tth111I	GACNNNGTC	1 cut(s)	306
Vha464I	CTTAAG	1 cut(s)	1303
VpaK11BI	GGWCC	2 cut(s)	266, 1028
VspI	ATTAAT	1 cut(s)	294
XapI	RAATTY	3 cut(s)	376, 449, 731
XceI	RCATGY	2 cut(s)	581, 1069
XmnI	GAANNNNTTC	1 cut(s)	541
XspI	CTAG	4 cut(s)	534, 761, 794, 1163
Zsp2I	ATGCAT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.