Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0012487

Physical Location & Seq

Genomic Coordinates Reverse (-)

16329436 .. 16333906

Gene Structure 4471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g13380.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGTTGACCTCCTCTCCTGCTTCTCTCTCTATAAATCCCTCTCTCTCCCCTCCCTCCTTTTCTGCATCCACCACCCAATCATCTGCCTTTTCTCCTCCCCTCAGATTCCCAGGCGGCCAATCCTCACGAACAAAACCCAGTAGCCTTTGGACTCAAGGTGTTCGATTGTGTGCCTCCCAGAGACGAAAAAGTAGAAAACTTGAGCTTAAAGCCAGCGACATGACAATTACAGAGGTTGGGCTAGAGGAAAAGGAAGTAGAAGAGGGTCCTCCTCCATATGTTGAGTCAGAGATTAACTCCAGACCTCGTCGCATTGCTCTCTTTGTTGAGCCTTCTCCCTTTGCATATGTGTCAGGTTATAAAAATCGGTTCCAGAATTTCATTAGATACTTGCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACCCACGAAGGAGTTCCTGACGAATTTTATGGAGCAAAATTGATTGGATCGATCCTTCTCAGCTTTCCCTGCCCCTTGTATCAAAAGGTTCCCCTTTCCCTTGCACTTAGTCCTAGAATAATTTCGGAGGTTGCTCAGTTCAAGCCTGACATTATACATGCATCCTCACCTGGAATTATGGTTTTCGGCGCGCTCATTATCGCTAAGTTGTTATCTGTCCCTATAGTGATGTCGTATCACACTCATGTGCCAGTATATATCCCGAGATACACTTTCAGTTGGCTGGTGAAACCCATGTGGTTAGTCATAAAATTTCTGCACAGAGCTGCTGATCTCACGCTAGTGCCATCAGCTGCAATCAGTAAGGATCTCCTAGAAGCTGGGGTGGCCGCAGCTAATACAATCCGTCTTTGGAATAAGGGTGTCGATTCTGAAAGCTTCAATCCCTGCTTCCGTTCACATGAAATGCGTATAAGACTGAGCAATGGCGAACCTGAGAAACCTTTAATTGTTCATGTTGGAAGACTTGGAGTGGAGAAGAGTTTGGATTTTCTGAAAAGTGTCATGGATCGGCTTCCCGAAGCAAGAATTGCTTTCATTGGAGATGGACCATACAGGGAGGATCTGGAAAAACTGTTTGAAGGCATGCCCGCGGTATTTACAGGAATGTTAGGAGGTGAAGAGCTATCTCAGGCATATGCCAGTGGTGACGTTTTTGTGATGCCTTCAGAATCAGAGACACTAGGGCTTGTTGTATTGGAGGCTATGTCTTCAGGTATCCCCGTGGTTGGAGCTCGTGCTGGTGGAATCCCAGATATAATTCCGGCAGATCAGGAGGGGAAAACTGGCTTTCTCTACAATTACAATGACCTTGATGACTGCTTAAGTAAGTTGCAGCCCCTGCTGGAGAACAAGGAATTAAGGGAAACAATTGGCAAGGCAGCACGTGAGGAAATGGAGAAGTACGATTGGAAAGCAGCCACACGAGTAATTCGAAATGAGCAATACAGTGATGCCATTTGGTTCTGGAGGAAGAAGAGAGCGCAATTTCTGAGACCATTGCAGTGGTTCATGAAGCGCATTTTTCCTCCAACCACACCAGAAATCAAGTACAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006790 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008610 GO:0009058 GO:0009247 GO:0009267 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009941 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031975 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046505 GO:0046506 GO:0050896 GO:0051716 GO:0070085 GO:0071496 GO:0071704 GO:0097502 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

515

Amino Acids

57.56

Weight (kDa)

8.44

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01220 AT5G01220
fragaria_vesca	FvH4_6g11930
malus_domestica	MD04G1148000.v1.1 MD12G1161400.v1.1
prunus_persica	Prupe.6G271800_v2.0.a1
pyrus_communis	pycom04g13380 pycom12g15320
rosa_chinensis	RchiOBHm_Chr3g0463701
rosa_laevigata	RLG00000024763
rosa_multiflora	Rmu_sc0003267.1_g000033
rosa_roxburghii	Rroxscaffold_6G00416360
rosa_rugosa	Rorug03G0067000 Rorug03G0067100
rosa_samantha	Rh3AG124100 Rh3BG128700 Rh3CG130900 Rh3DG129300
rosa_wichuraiana	Rw3G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	360
AccII	CGCG	2 cut(s)	617, 1079
AciI	CCGC	4 cut(s)	114, 816, 1077, 1079
AclWI	GGATC	5 cut(s)	472, 481, 801, 1002, 1056
AcoI	YGGCCR	2 cut(s)	115, 813
AcsI	RAATTY	3 cut(s)	376, 449, 737
AcuI	CTGAAG	2 cut(s)	1137, 1182
AcvI	CACGTG	1 cut(s)	1373
AfaI	GTAC	2 cut(s)	1391, 1538
AfiI	CCNNNNNNNGG	1 cut(s)	1214
AflII	CTTAAG	1 cut(s)	1309
AgsI	TTSAA	3 cut(s)	568, 868, 1067
AjnI	CCWGG	2 cut(s)	109, 595
AleI	CACNNNNGTG	2 cut(s)	671, 767
AluBI	AGCT	9 cut(s)	205, 489, 752, 779, 806, 821, 864, 1111, 1220
AluI	AGCT	9 cut(s)	205, 489, 752, 779, 806, 821, 864, 1111, 1220
Alw21I	GWGCWC	1 cut(s)	1222
Alw26I	GTCTC	3 cut(s)	175, 1157, 1474
AlwI	GGATC	5 cut(s)	472, 481, 801, 1002, 1056
AlwNI	CAGNNNCTG	1 cut(s)	1327
Ama87I	CYCGRG	1 cut(s)	688
AoxI	GGCC	2 cut(s)	115, 813
ApeKI	GCWGC	6 cut(s)	752, 779, 818, 1321, 1367, 1403
ApoI	RAATTY	3 cut(s)	376, 449, 737
Asp700I	GAANNNNTTC	2 cut(s)	438, 547
AspLEI	GCGC	4 cut(s)	617, 619, 1471, 1506
AspS9I	GGNCC	2 cut(s)	266, 1034
AsuHPI	GGTGA	5 cut(s)	424, 585, 724, 1115, 1145
AsuII	TTCGAA	1 cut(s)	1420
AvaI	CYCGRG	1 cut(s)	688
AvaII	GGWCC	2 cut(s)	266, 1034
BaeI	ACNNNNGTAYC	2 cut(s)	379, 412
BanII	GRGCYC	1 cut(s)	1222
BauI	CACGAG	2 cut(s)	1221, 1410
BbrPI	CACGTG	1 cut(s)	1373
BbsI	GAAGAC	2 cut(s)	955, 1188
Bbv12I	GWGCWC	1 cut(s)	1222
BbvI	GCAGC	6 cut(s)	739, 766, 830, 1333, 1379, 1415
BccI	CCATC	3 cut(s)	409, 781, 1025
BciT130I	CCWGG	2 cut(s)	111, 597
BciVI	GTATCC	1 cut(s)	1214
BcoDI	GTCTC	3 cut(s)	175, 1157, 1474
BfaI	CTAG	5 cut(s)	242, 540, 767, 800, 1169
BfmI	CTRYAG	1 cut(s)	648
BfrI	CTTAAG	1 cut(s)	1309
BfuI	GTATCC	1 cut(s)	1214
BisI	GCNGC	8 cut(s)	115, 753, 780, 816, 819, 1322, 1368, 1404
BlsI	GCNGC	8 cut(s)	116, 754, 781, 817, 820, 1323, 1369, 1405
Bme1390I	CCNGG	2 cut(s)	111, 597
Bme18I	GGWCC	2 cut(s)	266, 1034
BmeT110I	CYCGRG	1 cut(s)	688
BmgT120I	GGNCC	2 cut(s)	266, 1034
BmiI	GGNNCC	3 cut(s)	267, 371, 516
BmrFI	CCNGG	2 cut(s)	111, 597
BmrI	ACTGGG	1 cut(s)	132
BmsI	GCATC	4 cut(s)	74, 596, 1137, 1429
BmuI	ACTGGG	1 cut(s)	132
BpiI	GAAGAC	2 cut(s)	955, 1188
BplI	GAGNNNNNCTC	2 cut(s)	281, 313
BpmI	CTGGAG	3 cut(s)	283, 1352, 1474
Bpu14I	TTCGAA	1 cut(s)	1420
BpuEI	CTTGAG	2 cut(s)	138, 221
Bsa29I	ATCGAT	1 cut(s)	476
BsaAI	YACGTR	1 cut(s)	1373
BsaI	GGTCTC	1 cut(s)	1474
BsaJI	CCNNGG	3 cut(s)	109, 1077, 1209
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 1178, 1208
Bsc4I	CCNNNNNNNGG	1 cut(s)	1214
Bse1I	ACTGG	4 cut(s)	138, 677, 1128, 1276
Bse3DI	GCAATG	3 cut(s)	312, 916, 1484
BseBI	CCWGG	2 cut(s)	111, 597
BseCI	ATCGAT	1 cut(s)	476
BseDI	CCNNGG	3 cut(s)	109, 1077, 1209
BseGI	GGATG	3 cut(s)	65, 412, 587
BseLI	CCNNNNNNNGG	1 cut(s)	1214
BseMI	GCAATG	3 cut(s)	312, 916, 1484
BseMII	CTCAG	7 cut(s)	115, 499, 575, 896, 912, 1130, 1469
BseNI	ACTGG	4 cut(s)	138, 677, 1128, 1276
BsePI	GCGCGC	1 cut(s)	615
BseRI	GAGGAG	2 cut(s)	84, 261
BseXI	GCAGC	6 cut(s)	739, 766, 830, 1333, 1379, 1415
BseYI	CCCAGC	1 cut(s)	806
BsgI	GTGCAG	1 cut(s)	728
Bsh1236I	CGCG	2 cut(s)	617, 1079
BshFI	GGCC	2 cut(s)	117, 815
BshVI	ATCGAT	1 cut(s)	476
BsiHKAI	GWGCWC	1 cut(s)	1222
BsiHKCI	CYCGRG	1 cut(s)	688
BsiSI	CCGG	1 cut(s)	1250
BslFI	GGGAC	1 cut(s)	629
BslI	CCNNNNNNNGG	1 cut(s)	1214
BsmAI	GTCTC	3 cut(s)	175, 1157, 1474
BsmBI	CGTCTC	1 cut(s)	175
BsmFI	GGGAC	1 cut(s)	629
BsnI	GGCC	2 cut(s)	117, 815
Bso31I	GGTCTC	1 cut(s)	1474
BsoBI	CYCGRG	1 cut(s)	688
Bsp119I	TTCGAA	1 cut(s)	1420
Bsp1286I	GDGCHC	1 cut(s)	1222
Bsp143I	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
BspACI	CCGC	4 cut(s)	114, 816, 1077, 1079
BspANI	GGCC	2 cut(s)	117, 815
BspCNI	CTCAG	7 cut(s)	114, 498, 574, 897, 913, 1129, 1470
BspDI	ATCGAT	1 cut(s)	476
BspFNI	CGCG	2 cut(s)	617, 1079
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	3 cut(s)	267, 371, 516
BspPI	GGATC	5 cut(s)	472, 481, 801, 1002, 1056
BspQI	GCTCTTC	1 cut(s)	1101
BspT104I	TTCGAA	1 cut(s)	1420
BspTI	CTTAAG	1 cut(s)	1309
BspTNI	GGTCTC	1 cut(s)	1474
BsrDI	GCAATG	3 cut(s)	312, 916, 1484
BsrI	ACTGG	4 cut(s)	138, 677, 1128, 1276
BssECI	CCNNGG	3 cut(s)	109, 1077, 1209
BssHII	GCGCGC	1 cut(s)	615
BssMI	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
BssSI	CACGAG	2 cut(s)	1221, 1410
Bst2BI	CACGAG	2 cut(s)	1221, 1410
Bst2UI	CCWGG	2 cut(s)	111, 597
Bst4CI	ACNGT	2 cut(s)	1062, 1436
Bst6I	CTCTTC	4 cut(s)	255, 959, 1101, 1457
BstAFI	CTTAAG	1 cut(s)	1309
BstAPI	GCANNNNNTGC	2 cut(s)	1016, 1327
BstBAI	YACGTR	1 cut(s)	1373
BstBI	TTCGAA	1 cut(s)	1420
BstC8I	GCNNGC	4 cut(s)	214, 617, 1073, 1077
BstDEI	CTNAG	9 cut(s)	101, 485, 533, 561, 630, 905, 921, 1116, 1478
BstDSI	CCRYGG	2 cut(s)	1077, 1209
BstF5I	GGATG	3 cut(s)	65, 412, 587
BstFNI	CGCG	2 cut(s)	617, 1079
BstHHI	GCGC	4 cut(s)	617, 619, 1471, 1506
BstKTI	GATC	7 cut(s)	476, 480, 760, 796, 997, 1051, 1258
BstMAI	GTCTC	3 cut(s)	175, 1157, 1474
BstMBI	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
BstMWI	GCNNNNNNNGC	4 cut(s)	495, 812, 1016, 1327
BstNI	CCWGG	2 cut(s)	111, 597
BstNSI	RCATGY	2 cut(s)	587, 1075
BstSCI	CCNGG	2 cut(s)	109, 595
BstSFI	CTRYAG	1 cut(s)	648
BstUI	CGCG	2 cut(s)	617, 1079
BstV1I	GCAGC	6 cut(s)	739, 766, 830, 1333, 1379, 1415
BstV2I	GAAGAC	2 cut(s)	955, 1188
BstX2I	RGATCY	2 cut(s)	793, 1048
BstXI	CCANNNNNNTGG	1 cut(s)	1491
BstYI	RGATCY	2 cut(s)	793, 1048
Bsu15I	ATCGAT	1 cut(s)	476
BsuI	GTATCC	1 cut(s)	1214
BsuRI	GGCC	2 cut(s)	117, 815
BsuTUI	ATCGAT	1 cut(s)	476
BtgI	CCRYGG	2 cut(s)	1077, 1209
BtsCI	GGATG	3 cut(s)	65, 412, 587
BtsI	GCAGTG	1 cut(s)	1496
BtsIMutI	CAGTG	3 cut(s)	1135, 1441, 1496
Cac8I	GCNNGC	4 cut(s)	214, 617, 1073, 1077
CaiI	CAGNNNCTG	1 cut(s)	1327
CciI	TCATGA	1 cut(s)	1497
CfoI	GCGC	4 cut(s)	617, 619, 1471, 1506
Cfr13I	GGNCC	2 cut(s)	266, 1034
Cfr42I	CCGCGG	1 cut(s)	1080
ClaI	ATCGAT	1 cut(s)	476
Csp6I	GTAC	2 cut(s)	1390, 1537
CviAII	CATG	9 cut(s)	220, 584, 671, 721, 887, 941, 991, 1072, 1498
CviQI	GTAC	2 cut(s)	1390, 1537
DdeI	CTNAG	9 cut(s)	101, 485, 533, 561, 630, 905, 921, 1116, 1478
DpnI	GATC	7 cut(s)	475, 479, 759, 795, 996, 1050, 1257
DpnII	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
EaeI	YGGCCR	2 cut(s)	115, 813
Eam1104I	CTCTTC	4 cut(s)	255, 959, 1101, 1457
EarI	CTCTTC	4 cut(s)	255, 959, 1101, 1457
Ecl136II	GAGCTC	1 cut(s)	1220
Eco24I	GRGCYC	1 cut(s)	1222
Eco31I	GGTCTC	1 cut(s)	1474
Eco47I	GGWCC	2 cut(s)	266, 1034
Eco53kI	GAGCTC	1 cut(s)	1220
Eco57I	CTGAAG	2 cut(s)	1137, 1182
Eco72I	CACGTG	1 cut(s)	1373
Eco88I	CYCGRG	1 cut(s)	688
EcoICRI	GAGCTC	1 cut(s)	1220
EcoO109I	RGGNCCY	1 cut(s)	266
EcoRII	CCWGG	2 cut(s)	109, 595
EcoT22I	ATGCAT	1 cut(s)	589
EcoT38I	GRGCYC	1 cut(s)	1222
Esp3I	CGTCTC	1 cut(s)	175
FaeI	CATG	9 cut(s)	223, 587, 674, 724, 890, 944, 994, 1075, 1501
FalI	AAGNNNNNCTT	2 cut(s)	1003, 1035
FaqI	GGGAC	1 cut(s)	629
FatI	CATG	9 cut(s)	219, 583, 670, 720, 886, 940, 990, 1071, 1497
FauI	CCCGC	1 cut(s)	1084
FauNDI	CATATG	3 cut(s)	277, 346, 1123
Fnu4HI	GCNGC	8 cut(s)	115, 753, 780, 816, 819, 1322, 1368, 1404
FokI	GGATG	3 cut(s)	52, 419, 574
FriOI	GRGCYC	1 cut(s)	1222
Fsp4HI	GCNGC	8 cut(s)	115, 753, 780, 816, 819, 1322, 1368, 1404
FspBI	CTAG	5 cut(s)	242, 540, 767, 800, 1169
GlaI	GCGC	4 cut(s)	616, 618, 1470, 1505
GluI	GCNGC	8 cut(s)	115, 753, 780, 816, 819, 1322, 1368, 1404
GsaI	CCCAGC	1 cut(s)	810
GsuI	CTGGAG	3 cut(s)	283, 1352, 1474
HaeIII	GGCC	2 cut(s)	117, 815
HapII	CCGG	1 cut(s)	1250
HhaI	GCGC	4 cut(s)	617, 619, 1471, 1506
Hin1II	CATG	9 cut(s)	223, 587, 674, 724, 890, 944, 994, 1075, 1501
Hin6I	GCGC	4 cut(s)	615, 617, 1469, 1504
HinP1I	GCGC	4 cut(s)	615, 617, 1469, 1504
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	862
HinfI	GANTC	6 cut(s)	105, 151, 284, 854, 1157, 1233
HpaII	CCGG	1 cut(s)	1250
HphI	GGTGA	5 cut(s)	424, 585, 724, 1115, 1145
Hpy166II	GTNNAC	2 cut(s)	6, 884
Hpy188I	TCNGA	8 cut(s)	104, 289, 553, 859, 981, 1156, 1162, 1479
Hpy8I	GTNNAC	2 cut(s)	6, 884
Hpy99I	CGWCG	1 cut(s)	312
HpyAV	CCTTC	5 cut(s)	342, 428, 491, 1061, 1161
HpyCH4III	ACNGT	2 cut(s)	1062, 1436
HpyCH4IV	ACGT	2 cut(s)	1137, 1372
HpyCH4V	TGCA	8 cut(s)	65, 344, 530, 587, 745, 782, 1321, 1489
HpyF10VI	GCNNNNNNNGC	4 cut(s)	495, 812, 1016, 1327
HpyF3I	CTNAG	9 cut(s)	101, 485, 533, 561, 630, 905, 921, 1116, 1478
HpySE526I	ACGT	2 cut(s)	1137, 1372
Hsp92II	CATG	9 cut(s)	223, 587, 674, 724, 890, 944, 994, 1075, 1501
HspAI	GCGC	4 cut(s)	615, 617, 1469, 1504
KspI	CCGCGG	1 cut(s)	1080
Kzo9I	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
LguI	GCTCTTC	1 cut(s)	1101
LmnI	GCTCC	2 cut(s)	458, 1217
Lsp1109I	GCAGC	6 cut(s)	739, 766, 830, 1333, 1379, 1415
LweI	GCATC	4 cut(s)	74, 596, 1137, 1429
MaeI	CTAG	5 cut(s)	242, 540, 767, 800, 1169
MaeII	ACGT	2 cut(s)	1137, 1372
MaeIII	GTNAC	2 cut(s)	421, 1133
MalI	GATC	7 cut(s)	475, 479, 759, 795, 996, 1050, 1257
MboI	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
MboII	GAAGA	7 cut(s)	272, 960, 976, 1118, 1188, 1471, 1474
MfeI	CAATTG	1 cut(s)	1356
MflI	RGATCY	2 cut(s)	793, 1048
MhlI	GDGCHC	1 cut(s)	1222
MlyI	GAGTC	2 cut(s)	145, 293
MmeI	TCCRAC	3 cut(s)	925, 1195, 1541
Mph1103I	ATGCAT	1 cut(s)	589
MroXI	GAANNNNTTC	2 cut(s)	438, 547
MseI	TTAA	5 cut(s)	207, 294, 932, 1310, 1346
MslI	CAYNNNNRTG	4 cut(s)	669, 671, 767, 1489
MspA1I	CMGCKG	2 cut(s)	779, 1079
MspCI	CTTAAG	1 cut(s)	1309
MspI	CCGG	1 cut(s)	1250
MspR9I	CCNGG	2 cut(s)	111, 597
MunI	CAATTG	1 cut(s)	1356
MvaI	CCWGG	2 cut(s)	111, 597
MvnI	CGCG	2 cut(s)	617, 1079
MwoI	GCNNNNNNNGC	4 cut(s)	495, 812, 1016, 1327
NdeI	CATATG	3 cut(s)	277, 346, 1123
NdeII	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
NlaIII	CATG	9 cut(s)	223, 587, 674, 724, 890, 944, 994, 1075, 1501
NlaIV	GGNNCC	3 cut(s)	267, 371, 516
NmuCI	GTSAC	2 cut(s)	421, 1133
NsiI	ATGCAT	1 cut(s)	589
NspI	RCATGY	2 cut(s)	587, 1075
NspV	TTCGAA	1 cut(s)	1420
OliI	CACNNNNGTG	2 cut(s)	671, 767
PaeI	GCATGC	1 cut(s)	1075
PagI	TCATGA	1 cut(s)	1497
PauI	GCGCGC	1 cut(s)	615
PciSI	GCTCTTC	1 cut(s)	1101
PcsI	WCGNNNNNNNCGW	1 cut(s)	1417
PdmI	GAANNNNTTC	2 cut(s)	438, 547
PfeI	GAWTC	4 cut(s)	105, 854, 1157, 1233
PflFI	GACNNNGTC	1 cut(s)	306
PkrI	GCNGC	8 cut(s)	116, 754, 781, 817, 820, 1323, 1369, 1405
PleI	GAGTC	2 cut(s)	145, 292
PmaCI	CACGTG	1 cut(s)	1373
PmlI	CACGTG	1 cut(s)	1373
PpsI	GAGTC	2 cut(s)	145, 292
Ppu21I	YACGTR	1 cut(s)	1373
PpuMI	RGGWCCY	1 cut(s)	266
PsiI	TTATAA	1 cut(s)	360
Psp124BI	GAGCTC	1 cut(s)	1222
Psp5II	RGGWCCY	1 cut(s)	266
Psp6I	CCWGG	2 cut(s)	109, 595
PspCI	CACGTG	1 cut(s)	1373
PspFI	CCCAGC	1 cut(s)	806
PspGI	CCWGG	2 cut(s)	109, 595
PspN4I	GGNNCC	3 cut(s)	267, 371, 516
PspPI	GGNCC	2 cut(s)	266, 1034
PspPPI	RGGWCCY	1 cut(s)	266
PstNI	CAGNNNCTG	1 cut(s)	1327
PsuI	RGATCY	2 cut(s)	793, 1048
PsyI	GACNNNGTC	1 cut(s)	306
PteI	GCGCGC	1 cut(s)	615
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	2 cut(s)	1391, 1538
RsaNI	GTAC	2 cut(s)	1390, 1537
RseI	CAYNNNNRTG	4 cut(s)	669, 671, 767, 1489
SacI	GAGCTC	1 cut(s)	1222
SacII	CCGCGG	1 cut(s)	1080
SapI	GCTCTTC	1 cut(s)	1101
SaqAI	TTAA	5 cut(s)	207, 294, 932, 1310, 1346
SatI	GCNGC	8 cut(s)	115, 753, 780, 816, 819, 1322, 1368, 1404
Sau3AI	GATC	7 cut(s)	473, 477, 757, 793, 994, 1048, 1255
Sau96I	GGNCC	2 cut(s)	266, 1034
SchI	GAGTC	2 cut(s)	145, 293
ScrFI	CCNGG	2 cut(s)	111, 597
SduI	GDGCHC	1 cut(s)	1222
SfaNI	GCATC	4 cut(s)	74, 596, 1137, 1429
SfcI	CTRYAG	1 cut(s)	648
Sfr303I	CCGCGG	1 cut(s)	1080
SfuI	TTCGAA	1 cut(s)	1420
SgrBI	CCGCGG	1 cut(s)	1080
SinI	GGWCC	2 cut(s)	266, 1034
SmiMI	CAYNNNNRTG	4 cut(s)	669, 671, 767, 1489
SmlI	CTYRAG	3 cut(s)	153, 200, 1309
SmoI	CTYRAG	3 cut(s)	153, 200, 1309
SphI	GCATGC	1 cut(s)	1075
SsiI	CCGC	4 cut(s)	114, 816, 1077, 1079
SspMI	CTAG	5 cut(s)	242, 540, 767, 800, 1169
SstI	GAGCTC	1 cut(s)	1222
StyD4I	CCNGG	2 cut(s)	109, 595
TaaI	ACNGT	2 cut(s)	1062, 1436
TaiI	ACGT	2 cut(s)	1140, 1375
TaqI	TCGA	4 cut(s)	163, 476, 852, 1420
TatI	WGTACW	1 cut(s)	1536
TauI	GCSGC	2 cut(s)	117, 818
TfiI	GAWTC	4 cut(s)	105, 854, 1157, 1233
Tru1I	TTAA	5 cut(s)	207, 294, 932, 1310, 1346
Tru9I	TTAA	5 cut(s)	207, 294, 932, 1310, 1346
TscAI	CASTG	3 cut(s)	1135, 1441, 1496
TseFI	GTSAC	2 cut(s)	421, 1133
TseI	GCWGC	6 cut(s)	752, 779, 818, 1321, 1367, 1403
Tsp45I	GTSAC	2 cut(s)	421, 1133
TspDTI	ATGAA	6 cut(s)	370, 903, 929, 1012, 1486, 1514
TspGWI	ACGGA	2 cut(s)	821, 869
TspRI	CASTG	3 cut(s)	1135, 1441, 1496
Tth111I	GACNNNGTC	1 cut(s)	306
Vha464I	CTTAAG	1 cut(s)	1309
VpaK11BI	GGWCC	2 cut(s)	266, 1034
XapI	RAATTY	3 cut(s)	376, 449, 737
XceI	RCATGY	2 cut(s)	587, 1075
XmnI	GAANNNNTTC	2 cut(s)	438, 547
XspI	CTAG	5 cut(s)	242, 540, 767, 800, 1169
Zsp2I	ATGCAT	1 cut(s)	589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.