Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0012487

Physical Location & Seq

Genomic Coordinates Reverse (-)

38846402 .. 38850598

Gene Structure 4197 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024763

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGATCTCATCTCCTTCTCTCTCTATAAATCCATCTCTCTCCACAGCCACTCCCACTTCATCATCATCTTTTCCTCATTCTTCACCCCCAATATTCCTCAAATTCCCGAGCAACCAATATTCTCGGACAAAACCCATTAGCCTTTCTGCTCGTAAAGCTCGCTCGGGCTACTCAGAAAGTAGAAAACTTGAGGACAGAGCAAGCAATATGACGATTACAGAAGTTGAGATTGAAGAAGAGGAAGAGGGTCCTCCTCCTTATGTTGAATCGGAGACCAACTCGAGGCCTCGCCGCATTGCTCTGTTTGTTGAGCCTTCCCCTTTTGCATATGTGTCAGGGTATAAGAATCGATTCCAGAATTTCATTAGGTACTTGCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACACATGAAGGAGTGCCCGAGGAATTTTATGGAGCAAAATGTATTGGATCGCGAAGCTTCCCCTGCCCTTGGTATCAGAAGGTGCCCCTTTCCCTTGCGCTCAGTCCTAGAATAATTTCAGAGGTTGCCCATTTCAAGCCTGACATCATACATGCATCCTCACCTGGAATCATGGTATTTGGTGCTCTCATCATCGCTAAATTATTGTCTGTCCCCATTGTGATGTCATACCATACTCATGTGCCGGTATATATTCCAAGATACACCTTCAGTTGGTTGGTGAAACCCATGTGGATGGTTATAAAATTCCTGCACACAGCTGCTGATCTCACACTAGTGCCTTCAGCGGCAATCGCTAAGGATCTCCAAGTTGCTGGGGTCGCAGCAGCTAACACAATTCGTCTTTGGAATAAGGGTGTTGATTCAGAAAGCTTCCATCCTCGCTTCCGTTCTGATGAAATGCGTTCAAGACTAAGCAATGGTGAACCTGAGAAACCTTTAATAGTCCATGTTGGAAGACTTGGAGTCGAGAAGAGCTTGGATTTTCTAAAAAGTGTCATGGATAGGCTTCCAGAAGCACGAATTGCTTTTATTGGAGATGGACCATACAGGGCGGAGCTGGAAGAATTATTCTCTGGCATGCCTGCAGTATTTACAGGAATGTTAGGAGGTGAGGAGCTCTCTCAGGCGTATGCCAGCGGGGATGTTTTCGTGATGCCTTCGGAATCAGAGACACTTGGGCTTGTGGTATTGGAGGCTATGGCTTCAGGCATTCCTGTGGTAGGAGCTCGCTCAGGTGGAATCCCAGATATAATTCCGGAAGACCAGGAGGGGAAAACAGGATTTCTCTATAATTACAACGATCTTGATGACTGCTTAAGCAAATTGCGGCCTCTATTGGAGAACAAGGAATTAAGGGAAACAATTGGCCAAGCCGCACGCAAAGAGACAGAGAAGTTTGACTGGAAAGCAGCCACTCGAGTGATACGAAATGAACAATACAATGCTGCCATTTGGTTTTGGAGGAGGAGAAGAGCACAATTCTTGAGACCTCTGCAATGGCTGATGAAACGTATCTTCCCACAAACCCCACCGGAAATTAAGTACAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006790 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008610 GO:0009058 GO:0009247 GO:0009267 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009941 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031975 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046505 GO:0046506 GO:0050896 GO:0051716 GO:0070085 GO:0071496 GO:0071704 GO:0097502 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

507

Amino Acids

56.93

Weight (kDa)

8.23

Isoelectric Point (pI)

53.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_4	PF13439	113 - 279	9.6e-27	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	113 - 268	1.2e-16	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	298 - 451	3.8e-28	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	302 - 438	1.1e-26	Glycosyl transferases group 1
Glyco_trans_1_2	PF13524	318 - 454	1.5e-10	Glycosyl transferase-like
GT4-conflict	PF20706	361 - 411	2.7e-07	Family 4 Glycosyltransferase in conflict systems

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01220 AT5G01220
fragaria_vesca	FvH4_6g11930
malus_domestica	MD04G1148000.v1.1 MD12G1161400.v1.1
prunus_persica	Prupe.6G271800_v2.0.a1
pyrus_communis	pycom04g13380 pycom12g15320
rosa_chinensis	RchiOBHm_Chr3g0463701
rosa_laevigata	RLG00000024763
rosa_multiflora	Rmu_sc0003267.1_g000033
rosa_roxburghii	Rroxscaffold_6G00416360
rosa_rugosa	Rorug03G0067000 Rorug03G0067100
rosa_samantha	Rh3AG124100 Rh3BG128700 Rh3CG130900 Rh3DG129300
rosa_wichuraiana	Rw3G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	710
AccB1I	GGYRCC	1 cut(s)	490
AccII	CGCG	1 cut(s)	460
AccIII	TCCGGA	1 cut(s)	1225
AciI	CCGC	6 cut(s)	292, 755, 1022, 1107, 1297, 1344
AclWI	GGATC	2 cut(s)	463, 777
AcoI	YGGCCR	1 cut(s)	1336
AcsI	RAATTY	4 cut(s)	101, 358, 431, 713
AcuI	CTGAAG	3 cut(s)	661, 735, 1158
AfaI	GTAC	2 cut(s)	371, 1514
AfiI	CCNNNNNNNGG	4 cut(s)	282, 477, 681, 1190
AflII	CTTAAG	1 cut(s)	1285
AgsI	TTSAA	4 cut(s)	233, 266, 544, 876
AhdI	GACNNNNNGTC	1 cut(s)	932
AhlI	ACTAGT	1 cut(s)	742
AjnI	CCWGG	2 cut(s)	571, 1233
AleI	CACNNNNGTG	2 cut(s)	743, 1388
AluBI	AGCT	9 cut(s)	158, 465, 728, 797, 840, 945, 1027, 1087, 1196
AluI	AGCT	9 cut(s)	158, 465, 728, 797, 840, 945, 1027, 1087, 1196
Alw21I	GWGCWC	4 cut(s)	595, 1089, 1198, 1447
Alw26I	GTCTC	4 cut(s)	266, 1133, 1349, 1450
AlwI	GGATC	2 cut(s)	463, 777
AlwNI	CAGNNNCTG	1 cut(s)	731
Ama87I	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
Aor13HI	TCCGGA	1 cut(s)	1225
AoxI	GGCC	3 cut(s)	284, 1298, 1336
ApeKI	GCWGC	5 cut(s)	728, 791, 794, 1379, 1415
ApoI	RAATTY	4 cut(s)	101, 358, 431, 713
Asp700I	GAANNNNTTC	2 cut(s)	350, 523
AspLEI	GCGC	1 cut(s)	508
AspS9I	GGNCC	2 cut(s)	248, 1010
AsuHPI	GGTGA	6 cut(s)	75, 406, 561, 700, 902, 1091
AvaI	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
AvaII	GGWCC	2 cut(s)	248, 1010
BaeGI	GKGCMC	2 cut(s)	426, 495
BaeI	ACNNNNGTAYC	2 cut(s)	361, 394
BalI	TGGCCA	1 cut(s)	1338
BanI	GGYRCC	1 cut(s)	490
BanII	GRGCYC	2 cut(s)	1089, 1198
BbsI	GAAGAC	2 cut(s)	931, 1236
Bbv12I	GWGCWC	4 cut(s)	595, 1089, 1198, 1447
BbvI	GCAGC	5 cut(s)	715, 803, 806, 1391, 1402
BccI	CCATC	5 cut(s)	40, 391, 697, 852, 1001
BciT130I	CCWGG	2 cut(s)	573, 1235
BcoDI	GTCTC	4 cut(s)	266, 1133, 1349, 1450
BcuI	ACTAGT	1 cut(s)	742
BfaI	CTAG	2 cut(s)	516, 743
BfmI	CTRYAG	1 cut(s)	1053
BfrI	CTTAAG	1 cut(s)	1285
BisI	GCNGC	9 cut(s)	292, 729, 756, 792, 795, 1298, 1344, 1380, 1416
BlsI	GCNGC	9 cut(s)	293, 730, 757, 793, 796, 1299, 1345, 1381, 1417
Bme1390I	CCNGG	2 cut(s)	573, 1235
Bme18I	GGWCC	2 cut(s)	248, 1010
BmeRI	GACNNNNNGTC	1 cut(s)	932
BmeT110I	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
BmgT120I	GGNCC	2 cut(s)	248, 1010
BmiI	GGNNCC	2 cut(s)	249, 492
BmrFI	CCNGG	2 cut(s)	573, 1235
BmsI	GCATC	2 cut(s)	572, 1113
BpiI	GAAGAC	2 cut(s)	931, 1236
BplI	GAGNNNNNCTC	4 cut(s)	263, 295, 1073, 1105
Bpu10I	CCTNAGC	2 cut(s)	765, 1201
BpuEI	CTTGAG	2 cut(s)	209, 1474
Bsa29I	ATCGAT	1 cut(s)	349
BsaI	GGTCTC	2 cut(s)	266, 1450
BsaJI	CCNNGG	2 cut(s)	426, 476
BsaWI	WCCGGW	2 cut(s)	1225, 1501
BsaXI	ACNNNNNCTCC	2 cut(s)	34, 64
Bsc4I	CCNNNNNNNGG	4 cut(s)	282, 477, 681, 1190
Bse118I	RCCGGY	1 cut(s)	652
Bse1I	ACTGG	1 cut(s)	1376
Bse3DI	GCAATG	3 cut(s)	294, 892, 1472
BseAI	TCCGGA	1 cut(s)	1225
BseBI	CCWGG	2 cut(s)	573, 1235
BseCI	ATCGAT	1 cut(s)	349
BseDI	CCNNGG	2 cut(s)	426, 476
BseGI	GGATG	5 cut(s)	394, 563, 708, 844, 1117
BseLI	CCNNNNNNNGG	4 cut(s)	282, 477, 681, 1190
BseMI	GCAATG	3 cut(s)	294, 892, 1472
BseMII	CTCAG	5 cut(s)	186, 523, 888, 1106, 1215
BseNI	ACTGG	1 cut(s)	1376
BseRI	GAGGAG	4 cut(s)	243, 1097, 1447, 1450
BseSI	GKGCMC	2 cut(s)	426, 495
BseXI	GCAGC	5 cut(s)	715, 803, 806, 1391, 1402
BseYI	CCCAGC	1 cut(s)	782
BsgI	GTGCAG	1 cut(s)	704
Bsh1236I	CGCG	1 cut(s)	460
BshFI	GGCC	3 cut(s)	286, 1300, 1338
BshNI	GGYRCC	1 cut(s)	490
BshVI	ATCGAT	1 cut(s)	349
BsiHKAI	GWGCWC	4 cut(s)	595, 1089, 1198, 1447
BsiHKCI	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
BsiSI	CCGG	3 cut(s)	653, 1226, 1502
BslFI	GGGAC	1 cut(s)	605
BslI	CCNNNNNNNGG	4 cut(s)	282, 477, 681, 1190
BsmAI	GTCTC	4 cut(s)	266, 1133, 1349, 1450
BsmFI	GGGAC	1 cut(s)	605
BsmI	GAATGC	1 cut(s)	1179
BsnI	GGCC	3 cut(s)	286, 1300, 1338
Bso31I	GGTCTC	2 cut(s)	266, 1450
BsoBI	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
Bsp1286I	GDGCHC	6 cut(s)	426, 495, 595, 1089, 1198, 1447
Bsp13I	TCCGGA	1 cut(s)	1225
Bsp143I	GATC	5 cut(s)	3, 455, 733, 769, 1270
Bsp68I	TCGCGA	1 cut(s)	460
BspACI	CCGC	6 cut(s)	292, 755, 1022, 1107, 1297, 1344
BspANI	GGCC	3 cut(s)	286, 1300, 1338
BspCNI	CTCAG	5 cut(s)	185, 522, 889, 1105, 1214
BspDI	ATCGAT	1 cut(s)	349
BspEI	TCCGGA	1 cut(s)	1225
BspFNI	CGCG	1 cut(s)	460
BspLI	GGNNCC	2 cut(s)	249, 492
BspMAI	CTGCAG	1 cut(s)	1057
BspPI	GGATC	2 cut(s)	463, 777
BspQI	GCTCTTC	2 cut(s)	935, 1435
BspT107I	GGYRCC	1 cut(s)	490
BspTI	CTTAAG	1 cut(s)	1285
BspTNI	GGTCTC	2 cut(s)	266, 1450
BsrDI	GCAATG	3 cut(s)	294, 892, 1472
BsrFI	RCCGGY	1 cut(s)	652
BsrI	ACTGG	1 cut(s)	1376
BssAI	RCCGGY	1 cut(s)	652
BssECI	CCNNGG	2 cut(s)	426, 476
BssMI	GATC	5 cut(s)	3, 455, 733, 769, 1270
BssT1I	CCWWGG	1 cut(s)	476
Bst2UI	CCWGG	2 cut(s)	573, 1235
Bst6I	CTCTTC	4 cut(s)	231, 237, 935, 1435
BstAFI	CTTAAG	1 cut(s)	1285
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstC8I	GCNNGC	7 cut(s)	160, 202, 1049, 1053, 1105, 1198, 1348
BstDEI	CTNAG	7 cut(s)	172, 509, 765, 881, 897, 1092, 1201
BstENI	CCTNNNNNAGG	1 cut(s)	1188
BstF5I	GGATG	5 cut(s)	394, 563, 708, 844, 1117
BstFNI	CGCG	1 cut(s)	460
BstHHI	GCGC	1 cut(s)	508
BstKTI	GATC	5 cut(s)	6, 458, 736, 772, 1273
BstMAI	GTCTC	4 cut(s)	266, 1133, 1349, 1450
BstMBI	GATC	5 cut(s)	3, 455, 733, 769, 1270
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 471, 761, 788, 992
BstNI	CCWGG	2 cut(s)	573, 1235
BstNSI	RCATGY	2 cut(s)	563, 1051
BstSCI	CCNGG	2 cut(s)	571, 1233
BstSFI	CTRYAG	1 cut(s)	1053
BstSLI	GKGCMC	2 cut(s)	426, 495
BstUI	CGCG	1 cut(s)	460
BstV1I	GCAGC	5 cut(s)	715, 803, 806, 1391, 1402
BstV2I	GAAGAC	2 cut(s)	931, 1236
BstX2I	RGATCY	1 cut(s)	769
BstXI	CCANNNNNNTGG	2 cut(s)	703, 782
BstYI	RGATCY	1 cut(s)	769
Bsu15I	ATCGAT	1 cut(s)	349
BsuRI	GGCC	3 cut(s)	286, 1300, 1338
BsuTUI	ATCGAT	1 cut(s)	349
BtgZI	GCGATG	1 cut(s)	586
BtsCI	GGATG	5 cut(s)	394, 563, 708, 844, 1117
BtuMI	TCGCGA	1 cut(s)	460
Cac8I	GCNNGC	7 cut(s)	160, 202, 1049, 1053, 1105, 1198, 1348
CaiI	CAGNNNCTG	1 cut(s)	731
CfoI	GCGC	1 cut(s)	508
Cfr10I	RCCGGY	1 cut(s)	652
Cfr13I	GGNCC	2 cut(s)	248, 1010
ClaI	ATCGAT	1 cut(s)	349
Csp6I	GTAC	2 cut(s)	370, 1513
CviAII	CATG	8 cut(s)	413, 560, 580, 647, 697, 917, 967, 1048
CviQI	GTAC	2 cut(s)	370, 1513
DdeI	CTNAG	7 cut(s)	172, 509, 765, 881, 897, 1092, 1201
DpnI	GATC	5 cut(s)	5, 457, 735, 771, 1272
DpnII	GATC	5 cut(s)	3, 455, 733, 769, 1270
DriI	GACNNNNNGTC	1 cut(s)	932
EaeI	YGGCCR	1 cut(s)	1336
Eam1104I	CTCTTC	4 cut(s)	231, 237, 935, 1435
Eam1105I	GACNNNNNGTC	1 cut(s)	932
EarI	CTCTTC	4 cut(s)	231, 237, 935, 1435
EciI	GGCGGA	1 cut(s)	1037
Ecl136II	GAGCTC	2 cut(s)	1087, 1196
Eco130I	CCWWGG	1 cut(s)	476
Eco147I	AGGCCT	1 cut(s)	286
Eco24I	GRGCYC	2 cut(s)	1089, 1198
Eco31I	GGTCTC	2 cut(s)	266, 1450
Eco47I	GGWCC	2 cut(s)	248, 1010
Eco53kI	GAGCTC	2 cut(s)	1087, 1196
Eco57I	CTGAAG	3 cut(s)	661, 735, 1158
Eco88I	CYCGRG	5 cut(s)	106, 163, 280, 425, 1386
EcoICRI	GAGCTC	2 cut(s)	1087, 1196
EcoNI	CCTNNNNNAGG	1 cut(s)	1188
EcoO109I	RGGNCCY	1 cut(s)	248
EcoRII	CCWGG	2 cut(s)	571, 1233
EcoT14I	CCWWGG	1 cut(s)	476
EcoT22I	ATGCAT	1 cut(s)	565
EcoT38I	GRGCYC	2 cut(s)	1089, 1198
ErhI	CCWWGG	1 cut(s)	476
FaeI	CATG	8 cut(s)	416, 563, 583, 650, 700, 920, 970, 1051
FaqI	GGGAC	1 cut(s)	605
FatI	CATG	8 cut(s)	412, 559, 579, 646, 696, 916, 966, 1047
FauI	CCCGC	1 cut(s)	1100
FauNDI	CATATG	1 cut(s)	328
Fnu4HI	GCNGC	9 cut(s)	292, 729, 756, 792, 795, 1298, 1344, 1380, 1416
FokI	GGATG	5 cut(s)	401, 550, 715, 831, 1124
FriOI	GRGCYC	2 cut(s)	1089, 1198
Fsp4HI	GCNGC	9 cut(s)	292, 729, 756, 792, 795, 1298, 1344, 1380, 1416
FspBI	CTAG	2 cut(s)	516, 743
GlaI	GCGC	1 cut(s)	507
GluI	GCNGC	9 cut(s)	292, 729, 756, 792, 795, 1298, 1344, 1380, 1416
GsaI	CCCAGC	1 cut(s)	786
HaeIII	GGCC	3 cut(s)	286, 1300, 1338
HapII	CCGG	3 cut(s)	653, 1226, 1502
HhaI	GCGC	1 cut(s)	508
Hin1II	CATG	8 cut(s)	416, 563, 583, 650, 700, 920, 970, 1051
Hin6I	GCGC	1 cut(s)	506
HinP1I	GCGC	1 cut(s)	506
HindIII	AAGCTT	2 cut(s)	463, 838
HinfI	GANTC	8 cut(s)	266, 346, 351, 576, 830, 933, 1133, 1209
HpaII	CCGG	3 cut(s)	653, 1226, 1502
HphI	GGTGA	6 cut(s)	75, 406, 561, 700, 902, 1091
Hpy166II	GTNNAC	1 cut(s)	893
Hpy188I	TCNGA	9 cut(s)	126, 175, 271, 486, 529, 835, 862, 1132, 1138
Hpy8I	GTNNAC	1 cut(s)	893
HpyAV	CCTTC	7 cut(s)	24, 324, 410, 481, 685, 759, 1137
HpyCH4IV	ACGT	1 cut(s)	1480
HpyCH4V	TGCA	5 cut(s)	326, 563, 721, 1055, 1465
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 471, 761, 788, 992
HpyF3I	CTNAG	7 cut(s)	172, 509, 765, 881, 897, 1092, 1201
HpySE526I	ACGT	1 cut(s)	1480
Hsp92II	CATG	8 cut(s)	416, 563, 583, 650, 700, 920, 970, 1051
HspAI	GCGC	1 cut(s)	506
Kpn2I	TCCGGA	1 cut(s)	1225
Kzo9I	GATC	5 cut(s)	3, 455, 733, 769, 1270
LguI	GCTCTTC	2 cut(s)	935, 1435
LmnI	GCTCC	4 cut(s)	440, 1024, 1084, 1193
Lsp1109I	GCAGC	5 cut(s)	715, 803, 806, 1391, 1402
LweI	GCATC	2 cut(s)	572, 1113
MaeI	CTAG	2 cut(s)	516, 743
MaeII	ACGT	1 cut(s)	1480
MaeIII	GTNAC	1 cut(s)	403
MalI	GATC	5 cut(s)	5, 457, 735, 771, 1272
MboI	GATC	5 cut(s)	3, 455, 733, 769, 1270
MfeI	CAATTG	1 cut(s)	1332
MflI	RGATCY	1 cut(s)	769
MhlI	GDGCHC	6 cut(s)	426, 495, 595, 1089, 1198, 1447
MlsI	TGGCCA	1 cut(s)	1338
MluNI	TGGCCA	1 cut(s)	1338
MlyI	GAGTC	1 cut(s)	942
MmeI	TCCRAC	1 cut(s)	901
Mox20I	TGGCCA	1 cut(s)	1338
Mph1103I	ATGCAT	1 cut(s)	565
MroI	TCCGGA	1 cut(s)	1225
MroXI	GAANNNNTTC	2 cut(s)	350, 523
MscI	TGGCCA	1 cut(s)	1338
MseI	TTAA	4 cut(s)	908, 1286, 1322, 1509
MslI	CAYNNNNRTG	6 cut(s)	629, 645, 701, 743, 1184, 1388
Msp20I	TGGCCA	1 cut(s)	1338
MspA1I	CMGCKG	3 cut(s)	728, 755, 1107
MspCI	CTTAAG	1 cut(s)	1285
MspI	CCGG	3 cut(s)	653, 1226, 1502
MspR9I	CCNGG	2 cut(s)	573, 1235
MunI	CAATTG	1 cut(s)	1332
Mva1269I	GAATGC	1 cut(s)	1179
MvaI	CCWGG	2 cut(s)	573, 1235
MvnI	CGCG	1 cut(s)	460
MwoI	GCNNNNNNNGC	5 cut(s)	155, 471, 761, 788, 992
NdeI	CATATG	1 cut(s)	328
NdeII	GATC	5 cut(s)	3, 455, 733, 769, 1270
NlaIII	CATG	8 cut(s)	416, 563, 583, 650, 700, 920, 970, 1051
NlaIV	GGNNCC	2 cut(s)	249, 492
NmuCI	GTSAC	1 cut(s)	403
NruI	TCGCGA	1 cut(s)	460
NsiI	ATGCAT	1 cut(s)	565
NspI	RCATGY	2 cut(s)	563, 1051
OliI	CACNNNNGTG	2 cut(s)	743, 1388
PaeI	GCATGC	1 cut(s)	1051
PaeR7I	CTCGAG	2 cut(s)	280, 1386
PceI	AGGCCT	1 cut(s)	286
PciSI	GCTCTTC	2 cut(s)	935, 1435
PcsI	WCGNNNNNNNCGW	1 cut(s)	1393
PctI	GAATGC	1 cut(s)	1179
PdmI	GAANNNNTTC	2 cut(s)	350, 523
PfeI	GAWTC	7 cut(s)	266, 346, 351, 576, 830, 1133, 1209
PkrI	GCNGC	9 cut(s)	293, 730, 757, 793, 796, 1299, 1345, 1381, 1417
PleI	GAGTC	1 cut(s)	941
PpsI	GAGTC	1 cut(s)	941
PpuMI	RGGWCCY	1 cut(s)	248
PsiI	TTATAA	1 cut(s)	710
Psp124BI	GAGCTC	2 cut(s)	1089, 1198
Psp5II	RGGWCCY	1 cut(s)	248
Psp6I	CCWGG	2 cut(s)	571, 1233
PspFI	CCCAGC	1 cut(s)	782
PspGI	CCWGG	2 cut(s)	571, 1233
PspN4I	GGNNCC	2 cut(s)	249, 492
PspPI	GGNCC	2 cut(s)	248, 1010
PspPPI	RGGWCCY	1 cut(s)	248
PspXI	VCTCGAGB	2 cut(s)	280, 1386
PstI	CTGCAG	1 cut(s)	1057
PstNI	CAGNNNCTG	1 cut(s)	731
PsuI	RGATCY	1 cut(s)	769
PvuII	CAGCTG	1 cut(s)	728
RruI	TCGCGA	1 cut(s)	460
RsaI	GTAC	2 cut(s)	371, 1514
RsaNI	GTAC	2 cut(s)	370, 1513
RseI	CAYNNNNRTG	6 cut(s)	629, 645, 701, 743, 1184, 1388
SacI	GAGCTC	2 cut(s)	1089, 1198
SapI	GCTCTTC	2 cut(s)	935, 1435
SaqAI	TTAA	4 cut(s)	908, 1286, 1322, 1509
SatI	GCNGC	9 cut(s)	292, 729, 756, 792, 795, 1298, 1344, 1380, 1416
Sau3AI	GATC	5 cut(s)	3, 455, 733, 769, 1270
Sau96I	GGNCC	2 cut(s)	248, 1010
SchI	GAGTC	1 cut(s)	942
ScrFI	CCNGG	2 cut(s)	573, 1235
SduI	GDGCHC	6 cut(s)	426, 495, 595, 1089, 1198, 1447
SfaNI	GCATC	2 cut(s)	572, 1113
SfcI	CTRYAG	1 cut(s)	1053
Sfr274I	CTCGAG	2 cut(s)	280, 1386
SinI	GGWCC	2 cut(s)	248, 1010
SlaI	CTCGAG	2 cut(s)	280, 1386
SmiMI	CAYNNNNRTG	6 cut(s)	629, 645, 701, 743, 1184, 1388
SmlI	CTYRAG	5 cut(s)	188, 280, 1285, 1386, 1453
SmoI	CTYRAG	5 cut(s)	188, 280, 1285, 1386, 1453
SpeI	ACTAGT	1 cut(s)	742
SphI	GCATGC	1 cut(s)	1051
SseBI	AGGCCT	1 cut(s)	286
SsiI	CCGC	6 cut(s)	292, 755, 1022, 1107, 1297, 1344
SspI	AATATT	2 cut(s)	93, 119
SspMI	CTAG	2 cut(s)	516, 743
SstI	GAGCTC	2 cut(s)	1089, 1198
StuI	AGGCCT	1 cut(s)	286
StyD4I	CCNGG	2 cut(s)	571, 1233
StyI	CCWWGG	1 cut(s)	476
TaiI	ACGT	1 cut(s)	1483
TaqI	TCGA	4 cut(s)	281, 349, 936, 1387
TatI	WGTACW	1 cut(s)	1512
TauI	GCSGC	4 cut(s)	294, 758, 1300, 1346
TfiI	GAWTC	7 cut(s)	266, 346, 351, 576, 830, 1133, 1209
Tru1I	TTAA	4 cut(s)	908, 1286, 1322, 1509
Tru9I	TTAA	4 cut(s)	908, 1286, 1322, 1509
TseFI	GTSAC	1 cut(s)	403
TseI	GCWGC	5 cut(s)	728, 791, 794, 1379, 1415
Tsp45I	GTSAC	1 cut(s)	403
TspDTI	ATGAA	6 cut(s)	48, 352, 429, 879, 1416, 1490
TspGWI	ACGGA	1 cut(s)	845
Vha464I	CTTAAG	1 cut(s)	1285
VpaK11BI	GGWCC	2 cut(s)	248, 1010
XagI	CCTNNNNNAGG	1 cut(s)	1188
XapI	RAATTY	4 cut(s)	101, 358, 431, 713
XceI	RCATGY	2 cut(s)	563, 1051
XhoI	CTCGAG	2 cut(s)	280, 1386
XmnI	GAANNNNTTC	2 cut(s)	350, 523
XspI	CTAG	2 cut(s)	516, 743
Zsp2I	ATGCAT	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.