Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0012487

Physical Location & Seq

Genomic Coordinates Forward (+)

10708144 .. 10713119

Gene Structure 4976 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG130900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGGGGGATGAGGTGATGGTTGTGACAACACACGAAGGAGTGCCCGAGGAATTTTATGGAGCAAAATGTATTGGATCGCGAAGCTTCCCCTGCCCTTGGTATCAGAAGGTGCCCCTTTCCCTTGCGCTCAGTCCTAGAATAATTTCAGAGGTTGCCCATTTCAAGCCTGACATCATACATGCATCCTCACCTGGAATCATGGTATTCGGTGCTCTCATCATCGCTAAATTATTGTCTGTCCCCATTGTGATGTCATACCATACTCATGTGCCAGTATATATTCCAAGATACACCTTCAGTTGGTTGGTGAAACCCATGTGGATGGTTATAAAATTCCTGCACACAGCTGCTGATCTCACACTAGTGCCATCAGCGGCAATCGCTAAGGATCTCCAAGTTGCTGGGGTCGCAGCAGCTAACACAATTCGTCTTTGGAATAAGGGTGTTGATTCAGAAAGCTTCCATCCTCGCTTCCGTTCTGATGAAATGCGTTCAAGACTAAGCAATGGTGAACCTGAGAAACCTTTAATAGTCCATGTTGGAAGACTTGGAGTCGAGAAGAGCTTGGATTTTCTAAAAAGTGTCATGGATAGGCTTCCAGAAGCACGAATTGCTTTTATTGGAGATGGACCATACAGGGCGGAGCTGGAAGAATTATTCTCTGGCATGCCTGCAGTATTTACAGGAATGTTAGGAGGTGAGGAGCTCTCTCAGGCGTATGCCAGCGGGGATGTTTTCGTGATGCCTTCAGAATCAGAGACACTTGGGCTTGTGGTATTGGAGGCTATGGCTTCAGGCATTCCTGTGGTAGGAGCTCGCTCAGGTGGAATCCCAGATATAATTCCGGAAGACCAGGAGGGGAAAACAGGATTTCTCTATAATTACAACGATCTTGATGACTGCTTAAGCAAATTGCGGCCTCTGTTGGAGAACAAGGAATTAAGGGAAACAATTGGCCAAGCCGCACGCAAAGAGACAGAGAAGTTTGACTGGAAGGCAGCCACTCGAGTGATACGAAATGAACAATACAATGCTGCCATTTGGTTTTGGAGGAGGAGAAGAGCACAATTCTTGAGACCTCTGCAATGGCTGATGAAACGTATCTTCCCACAAACCCCACCGGAAATTAAGTATAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006790 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008610 GO:0009058 GO:0009247 GO:0009267 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009941 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031975 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046505 GO:0046506 GO:0050896 GO:0051716 GO:0070085 GO:0071496 GO:0071704 GO:0097502 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

379

Amino Acids

42.58

Weight (kDa)

7.1

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_4	PF13439	2 - 152	2.5e-23	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	2 - 141	2.8e-13	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	171 - 324	2.1e-28	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	175 - 311	6e-27	Glycosyl transferases group 1
Glyco_trans_1_2	PF13524	191 - 327	8.2e-11	Glycosyl transferase-like
GT4-conflict	PF20706	234 - 284	1.7e-07	Family 4 Glycosyltransferase in conflict systems

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01220 AT5G01220
fragaria_vesca	FvH4_6g11930
malus_domestica	MD04G1148000.v1.1 MD12G1161400.v1.1
prunus_persica	Prupe.6G271800_v2.0.a1
pyrus_communis	pycom04g13380 pycom12g15320
rosa_chinensis	RchiOBHm_Chr3g0463701
rosa_laevigata	RLG00000024763
rosa_multiflora	Rmu_sc0003267.1_g000033
rosa_roxburghii	Rroxscaffold_6G00416360
rosa_rugosa	Rorug03G0067000 Rorug03G0067100
rosa_samantha	Rh3AG124100 Rh3BG128700 Rh3CG130900 Rh3DG129300
rosa_wichuraiana	Rw3G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	329
AccB1I	GGYRCC	1 cut(s)	109
AccII	CGCG	1 cut(s)	79
AccIII	TCCGGA	1 cut(s)	844
AciI	CCGC	5 cut(s)	374, 641, 726, 916, 963
AclWI	GGATC	2 cut(s)	82, 396
AcoI	YGGCCR	1 cut(s)	955
AcsI	RAATTY	2 cut(s)	50, 332
AcuI	CTGAAG	3 cut(s)	280, 732, 777
AfiI	CCNNNNNNNGG	3 cut(s)	96, 300, 809
AflII	CTTAAG	1 cut(s)	904
AgsI	TTSAA	2 cut(s)	163, 495
AhdI	GACNNNNNGTC	1 cut(s)	551
AhlI	ACTAGT	1 cut(s)	361
AjnI	CCWGG	2 cut(s)	190, 852
AleI	CACNNNNGTG	2 cut(s)	362, 1007
AluBI	AGCT	8 cut(s)	84, 347, 416, 459, 564, 646, 706, 815
AluI	AGCT	8 cut(s)	84, 347, 416, 459, 564, 646, 706, 815
Alw21I	GWGCWC	4 cut(s)	214, 708, 817, 1066
Alw26I	GTCTC	3 cut(s)	752, 968, 1069
AlwI	GGATC	2 cut(s)	82, 396
AlwNI	CAGNNNCTG	1 cut(s)	350
Ama87I	CYCGRG	2 cut(s)	44, 1005
Aor13HI	TCCGGA	1 cut(s)	844
AoxI	GGCC	2 cut(s)	917, 955
ApeKI	GCWGC	5 cut(s)	347, 410, 413, 998, 1034
ApoI	RAATTY	2 cut(s)	50, 332
Asp700I	GAANNNNTTC	1 cut(s)	142
AspLEI	GCGC	1 cut(s)	127
AspS9I	GGNCC	1 cut(s)	629
AsuHPI	GGTGA	5 cut(s)	25, 180, 319, 521, 710
AvaI	CYCGRG	2 cut(s)	44, 1005
AvaII	GGWCC	1 cut(s)	629
BaeGI	GKGCMC	2 cut(s)	45, 114
BalI	TGGCCA	1 cut(s)	957
BanI	GGYRCC	1 cut(s)	109
BanII	GRGCYC	2 cut(s)	708, 817
BbsI	GAAGAC	2 cut(s)	550, 855
Bbv12I	GWGCWC	4 cut(s)	214, 708, 817, 1066
BbvI	GCAGC	5 cut(s)	334, 422, 425, 1010, 1021
BccI	CCATC	5 cut(s)	10, 316, 376, 471, 620
BciT130I	CCWGG	2 cut(s)	192, 854
BcoDI	GTCTC	3 cut(s)	752, 968, 1069
BcuI	ACTAGT	1 cut(s)	361
BfaI	CTAG	2 cut(s)	135, 362
BfmI	CTRYAG	1 cut(s)	672
BfrI	CTTAAG	1 cut(s)	904
BisI	GCNGC	8 cut(s)	348, 375, 411, 414, 917, 963, 999, 1035
BlsI	GCNGC	8 cut(s)	349, 376, 412, 415, 918, 964, 1000, 1036
Bme1390I	CCNGG	2 cut(s)	192, 854
Bme18I	GGWCC	1 cut(s)	629
BmeRI	GACNNNNNGTC	1 cut(s)	551
BmeT110I	CYCGRG	2 cut(s)	44, 1005
BmgT120I	GGNCC	1 cut(s)	629
BmiI	GGNNCC	1 cut(s)	111
BmrFI	CCNGG	2 cut(s)	192, 854
BmsI	GCATC	2 cut(s)	191, 732
BpiI	GAAGAC	2 cut(s)	550, 855
BplI	GAGNNNNNCTC	2 cut(s)	692, 724
Bpu10I	CCTNAGC	2 cut(s)	384, 820
BpuEI	CTTGAG	1 cut(s)	1093
BsaI	GGTCTC	1 cut(s)	1069
BsaJI	CCNNGG	2 cut(s)	45, 95
BsaWI	WCCGGW	2 cut(s)	844, 1120
Bsc4I	CCNNNNNNNGG	3 cut(s)	96, 300, 809
Bse1I	ACTGG	2 cut(s)	272, 995
Bse3DI	GCAATG	2 cut(s)	511, 1091
BseAI	TCCGGA	1 cut(s)	844
BseBI	CCWGG	2 cut(s)	192, 854
BseDI	CCNNGG	2 cut(s)	45, 95
BseGI	GGATG	5 cut(s)	13, 182, 327, 463, 736
BseLI	CCNNNNNNNGG	3 cut(s)	96, 300, 809
BseMI	GCAATG	2 cut(s)	511, 1091
BseMII	CTCAG	4 cut(s)	142, 507, 725, 834
BseNI	ACTGG	2 cut(s)	272, 995
BseRI	GAGGAG	3 cut(s)	716, 1066, 1069
BseSI	GKGCMC	2 cut(s)	45, 114
BseXI	GCAGC	5 cut(s)	334, 422, 425, 1010, 1021
BseYI	CCCAGC	1 cut(s)	401
BsgI	GTGCAG	1 cut(s)	323
Bsh1236I	CGCG	1 cut(s)	79
BshFI	GGCC	2 cut(s)	919, 957
BshNI	GGYRCC	1 cut(s)	109
BsiHKAI	GWGCWC	4 cut(s)	214, 708, 817, 1066
BsiHKCI	CYCGRG	2 cut(s)	44, 1005
BsiSI	CCGG	2 cut(s)	845, 1121
BslFI	GGGAC	1 cut(s)	224
BslI	CCNNNNNNNGG	3 cut(s)	96, 300, 809
BsmAI	GTCTC	3 cut(s)	752, 968, 1069
BsmFI	GGGAC	1 cut(s)	224
BsmI	GAATGC	1 cut(s)	798
BsnI	GGCC	2 cut(s)	919, 957
Bso31I	GGTCTC	1 cut(s)	1069
BsoBI	CYCGRG	2 cut(s)	44, 1005
Bsp1286I	GDGCHC	6 cut(s)	45, 114, 214, 708, 817, 1066
Bsp13I	TCCGGA	1 cut(s)	844
Bsp143I	GATC	4 cut(s)	74, 352, 388, 889
Bsp68I	TCGCGA	1 cut(s)	79
BspACI	CCGC	5 cut(s)	374, 641, 726, 916, 963
BspANI	GGCC	2 cut(s)	919, 957
BspCNI	CTCAG	4 cut(s)	141, 508, 724, 833
BspEI	TCCGGA	1 cut(s)	844
BspFNI	CGCG	1 cut(s)	79
BspLI	GGNNCC	1 cut(s)	111
BspMAI	CTGCAG	1 cut(s)	676
BspPI	GGATC	2 cut(s)	82, 396
BspQI	GCTCTTC	2 cut(s)	554, 1054
BspT107I	GGYRCC	1 cut(s)	109
BspTI	CTTAAG	1 cut(s)	904
BspTNI	GGTCTC	1 cut(s)	1069
BsrDI	GCAATG	2 cut(s)	511, 1091
BsrI	ACTGG	2 cut(s)	272, 995
BssECI	CCNNGG	2 cut(s)	45, 95
BssMI	GATC	4 cut(s)	74, 352, 388, 889
BssT1I	CCWWGG	1 cut(s)	95
Bst2UI	CCWGG	2 cut(s)	192, 854
Bst6I	CTCTTC	2 cut(s)	554, 1054
BstAFI	CTTAAG	1 cut(s)	904
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstC8I	GCNNGC	5 cut(s)	668, 672, 724, 817, 967
BstDEI	CTNAG	6 cut(s)	128, 384, 500, 516, 711, 820
BstENI	CCTNNNNNAGG	1 cut(s)	807
BstF5I	GGATG	5 cut(s)	13, 182, 327, 463, 736
BstFNI	CGCG	1 cut(s)	79
BstHHI	GCGC	1 cut(s)	127
BstKTI	GATC	4 cut(s)	77, 355, 391, 892
BstMAI	GTCTC	3 cut(s)	752, 968, 1069
BstMBI	GATC	4 cut(s)	74, 352, 388, 889
BstMWI	GCNNNNNNNGC	4 cut(s)	90, 380, 407, 611
BstNI	CCWGG	2 cut(s)	192, 854
BstNSI	RCATGY	2 cut(s)	182, 670
BstSCI	CCNGG	2 cut(s)	190, 852
BstSFI	CTRYAG	1 cut(s)	672
BstSLI	GKGCMC	2 cut(s)	45, 114
BstUI	CGCG	1 cut(s)	79
BstV1I	GCAGC	5 cut(s)	334, 422, 425, 1010, 1021
BstV2I	GAAGAC	2 cut(s)	550, 855
BstX2I	RGATCY	1 cut(s)	388
BstXI	CCANNNNNNTGG	2 cut(s)	322, 401
BstYI	RGATCY	1 cut(s)	388
BsuRI	GGCC	2 cut(s)	919, 957
BtgZI	GCGATG	1 cut(s)	205
BtsCI	GGATG	5 cut(s)	13, 182, 327, 463, 736
BtuMI	TCGCGA	1 cut(s)	79
Cac8I	GCNNGC	5 cut(s)	668, 672, 724, 817, 967
CaiI	CAGNNNCTG	1 cut(s)	350
CfoI	GCGC	1 cut(s)	127
Cfr13I	GGNCC	1 cut(s)	629
CviAII	CATG	7 cut(s)	179, 199, 266, 316, 536, 586, 667
DdeI	CTNAG	6 cut(s)	128, 384, 500, 516, 711, 820
DpnI	GATC	4 cut(s)	76, 354, 390, 891
DpnII	GATC	4 cut(s)	74, 352, 388, 889
DriI	GACNNNNNGTC	1 cut(s)	551
EaeI	YGGCCR	1 cut(s)	955
Eam1104I	CTCTTC	2 cut(s)	554, 1054
Eam1105I	GACNNNNNGTC	1 cut(s)	551
EarI	CTCTTC	2 cut(s)	554, 1054
EciI	GGCGGA	1 cut(s)	656
Ecl136II	GAGCTC	2 cut(s)	706, 815
Eco130I	CCWWGG	1 cut(s)	95
Eco24I	GRGCYC	2 cut(s)	708, 817
Eco31I	GGTCTC	1 cut(s)	1069
Eco47I	GGWCC	1 cut(s)	629
Eco53kI	GAGCTC	2 cut(s)	706, 815
Eco57I	CTGAAG	3 cut(s)	280, 732, 777
Eco88I	CYCGRG	2 cut(s)	44, 1005
EcoICRI	GAGCTC	2 cut(s)	706, 815
EcoNI	CCTNNNNNAGG	1 cut(s)	807
EcoRII	CCWGG	2 cut(s)	190, 852
EcoT14I	CCWWGG	1 cut(s)	95
EcoT22I	ATGCAT	1 cut(s)	184
EcoT38I	GRGCYC	2 cut(s)	708, 817
ErhI	CCWWGG	1 cut(s)	95
FaeI	CATG	7 cut(s)	182, 202, 269, 319, 539, 589, 670
FaqI	GGGAC	1 cut(s)	224
FatI	CATG	7 cut(s)	178, 198, 265, 315, 535, 585, 666
FauI	CCCGC	1 cut(s)	719
Fnu4HI	GCNGC	8 cut(s)	348, 375, 411, 414, 917, 963, 999, 1035
FokI	GGATG	5 cut(s)	20, 169, 334, 450, 743
FriOI	GRGCYC	2 cut(s)	708, 817
Fsp4HI	GCNGC	8 cut(s)	348, 375, 411, 414, 917, 963, 999, 1035
FspBI	CTAG	2 cut(s)	135, 362
GlaI	GCGC	1 cut(s)	126
GluI	GCNGC	8 cut(s)	348, 375, 411, 414, 917, 963, 999, 1035
GsaI	CCCAGC	1 cut(s)	405
HaeIII	GGCC	2 cut(s)	919, 957
HapII	CCGG	2 cut(s)	845, 1121
HhaI	GCGC	1 cut(s)	127
Hin1II	CATG	7 cut(s)	182, 202, 269, 319, 539, 589, 670
Hin6I	GCGC	1 cut(s)	125
HinP1I	GCGC	1 cut(s)	125
HindIII	AAGCTT	2 cut(s)	82, 457
HinfI	GANTC	5 cut(s)	195, 449, 552, 752, 828
HpaII	CCGG	2 cut(s)	845, 1121
HphI	GGTGA	5 cut(s)	25, 180, 319, 521, 710
Hpy166II	GTNNAC	1 cut(s)	512
Hpy188I	TCNGA	6 cut(s)	105, 148, 454, 481, 751, 757
Hpy188III	TCNNGA	8 cut(s)	78, 495, 556, 599, 739, 845, 893, 1072
Hpy8I	GTNNAC	1 cut(s)	512
HpyAV	CCTTC	5 cut(s)	29, 100, 304, 756, 988
HpyCH4IV	ACGT	1 cut(s)	1099
HpyCH4V	TGCA	4 cut(s)	182, 340, 674, 1084
HpyF10VI	GCNNNNNNNGC	4 cut(s)	90, 380, 407, 611
HpyF3I	CTNAG	6 cut(s)	128, 384, 500, 516, 711, 820
HpySE526I	ACGT	1 cut(s)	1099
Hsp92II	CATG	7 cut(s)	182, 202, 269, 319, 539, 589, 670
HspAI	GCGC	1 cut(s)	125
Kpn2I	TCCGGA	1 cut(s)	844
Kzo9I	GATC	4 cut(s)	74, 352, 388, 889
LguI	GCTCTTC	2 cut(s)	554, 1054
LmnI	GCTCC	4 cut(s)	59, 643, 703, 812
Lsp1109I	GCAGC	5 cut(s)	334, 422, 425, 1010, 1021
LweI	GCATC	2 cut(s)	191, 732
MaeI	CTAG	2 cut(s)	135, 362
MaeII	ACGT	1 cut(s)	1099
MaeIII	GTNAC	1 cut(s)	22
MalI	GATC	4 cut(s)	76, 354, 390, 891
MboI	GATC	4 cut(s)	74, 352, 388, 889
MboII	GAAGA	6 cut(s)	555, 571, 662, 860, 1071, 1096
MfeI	CAATTG	1 cut(s)	951
MflI	RGATCY	1 cut(s)	388
MhlI	GDGCHC	6 cut(s)	45, 114, 214, 708, 817, 1066
MlsI	TGGCCA	1 cut(s)	957
MluNI	TGGCCA	1 cut(s)	957
MlyI	GAGTC	1 cut(s)	561
MmeI	TCCRAC	2 cut(s)	520, 906
Mox20I	TGGCCA	1 cut(s)	957
Mph1103I	ATGCAT	1 cut(s)	184
MroI	TCCGGA	1 cut(s)	844
MroXI	GAANNNNTTC	1 cut(s)	142
MscI	TGGCCA	1 cut(s)	957
MseI	TTAA	4 cut(s)	527, 905, 941, 1128
MslI	CAYNNNNRTG	6 cut(s)	248, 264, 320, 362, 803, 1007
Msp20I	TGGCCA	1 cut(s)	957
MspA1I	CMGCKG	3 cut(s)	347, 374, 726
MspCI	CTTAAG	1 cut(s)	904
MspI	CCGG	2 cut(s)	845, 1121
MspR9I	CCNGG	2 cut(s)	192, 854
MunI	CAATTG	1 cut(s)	951
Mva1269I	GAATGC	1 cut(s)	798
MvaI	CCWGG	2 cut(s)	192, 854
MvnI	CGCG	1 cut(s)	79
MwoI	GCNNNNNNNGC	4 cut(s)	90, 380, 407, 611
NdeII	GATC	4 cut(s)	74, 352, 388, 889
NlaIII	CATG	7 cut(s)	182, 202, 269, 319, 539, 589, 670
NlaIV	GGNNCC	1 cut(s)	111
NmuCI	GTSAC	1 cut(s)	22
NruI	TCGCGA	1 cut(s)	79
NsiI	ATGCAT	1 cut(s)	184
NspI	RCATGY	2 cut(s)	182, 670
OliI	CACNNNNGTG	2 cut(s)	362, 1007
PaeI	GCATGC	1 cut(s)	670
PaeR7I	CTCGAG	1 cut(s)	1005
PciSI	GCTCTTC	2 cut(s)	554, 1054
PcsI	WCGNNNNNNNCGW	1 cut(s)	1012
PctI	GAATGC	1 cut(s)	798
PdmI	GAANNNNTTC	1 cut(s)	142
PfeI	GAWTC	4 cut(s)	195, 449, 752, 828
PkrI	GCNGC	8 cut(s)	349, 376, 412, 415, 918, 964, 1000, 1036
PleI	GAGTC	1 cut(s)	560
PpsI	GAGTC	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	329
Psp124BI	GAGCTC	2 cut(s)	708, 817
Psp6I	CCWGG	2 cut(s)	190, 852
PspFI	CCCAGC	1 cut(s)	401
PspGI	CCWGG	2 cut(s)	190, 852
PspN4I	GGNNCC	1 cut(s)	111
PspPI	GGNCC	1 cut(s)	629
PspXI	VCTCGAGB	1 cut(s)	1005
PstI	CTGCAG	1 cut(s)	676
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	1 cut(s)	388
PvuII	CAGCTG	1 cut(s)	347
RruI	TCGCGA	1 cut(s)	79
RseI	CAYNNNNRTG	6 cut(s)	248, 264, 320, 362, 803, 1007
SacI	GAGCTC	2 cut(s)	708, 817
SapI	GCTCTTC	2 cut(s)	554, 1054
SaqAI	TTAA	4 cut(s)	527, 905, 941, 1128
SatI	GCNGC	8 cut(s)	348, 375, 411, 414, 917, 963, 999, 1035
Sau3AI	GATC	4 cut(s)	74, 352, 388, 889
Sau96I	GGNCC	1 cut(s)	629
SchI	GAGTC	1 cut(s)	561
ScrFI	CCNGG	2 cut(s)	192, 854
SduI	GDGCHC	6 cut(s)	45, 114, 214, 708, 817, 1066
SfaNI	GCATC	2 cut(s)	191, 732
SfcI	CTRYAG	1 cut(s)	672
Sfr274I	CTCGAG	1 cut(s)	1005
SinI	GGWCC	1 cut(s)	629
SlaI	CTCGAG	1 cut(s)	1005
SmiMI	CAYNNNNRTG	6 cut(s)	248, 264, 320, 362, 803, 1007
SmlI	CTYRAG	3 cut(s)	904, 1005, 1072
SmoI	CTYRAG	3 cut(s)	904, 1005, 1072
SpeI	ACTAGT	1 cut(s)	361
SphI	GCATGC	1 cut(s)	670
SsiI	CCGC	5 cut(s)	374, 641, 726, 916, 963
SspMI	CTAG	2 cut(s)	135, 362
SstI	GAGCTC	2 cut(s)	708, 817
StyD4I	CCNGG	2 cut(s)	190, 852
StyI	CCWWGG	1 cut(s)	95
TaiI	ACGT	1 cut(s)	1102
TaqI	TCGA	2 cut(s)	555, 1006
TauI	GCSGC	3 cut(s)	377, 919, 965
TfiI	GAWTC	4 cut(s)	195, 449, 752, 828
Tru1I	TTAA	4 cut(s)	527, 905, 941, 1128
Tru9I	TTAA	4 cut(s)	527, 905, 941, 1128
TseFI	GTSAC	1 cut(s)	22
TseI	GCWGC	5 cut(s)	347, 410, 413, 998, 1034
Tsp45I	GTSAC	1 cut(s)	22
TspDTI	ATGAA	3 cut(s)	498, 1035, 1109
TspGWI	ACGGA	1 cut(s)	464
Vha464I	CTTAAG	1 cut(s)	904
VpaK11BI	GGWCC	1 cut(s)	629
XagI	CCTNNNNNAGG	1 cut(s)	807
XapI	RAATTY	2 cut(s)	50, 332
XceI	RCATGY	2 cut(s)	182, 670
XhoI	CTCGAG	1 cut(s)	1005
XmnI	GAANNNNTTC	1 cut(s)	142
XspI	CTAG	2 cut(s)	135, 362
Zsp2I	ATGCAT	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.