MD04G1248500.v1.1

Dual specificity phosphatase, catalytic domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
32285784 .. 32286110
327 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1248500.v1.1.491

Sequence Viewer

Length: 327 bp
ATGGTTGGTGTATCGGTTTTGATAGGGTTGATGGTAGCAGTATATTTCGCGTTGTTTGCCTGCCTCAAAAGCTTTGGTTTCACAGTGCTTTCCATACCATTTTTGTATGCCTCTTTGGTTTCAGCTTTGGTTTCACTTGCTGCTCATCCATTGATAGAGCTTCCCGTGCTGTTACGAAAGAACCCAGATGGGAGTTTCCCCACATGGTCGATTATAATGTTCAGCCCCTATTTGTATTTCGTCCGCTTCTTCTCGGCATTGCGAAGGTTGCATCGTAGGGAGGCTCCTTACACTGAAATCTCTGAGGGTTTGTTCGTTGGACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.12

Weight (kDa)

9.65

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 215
AccII CGCG 1 cut(s) 50
AciI CCGC 1 cut(s) 244
AluBI AGCT 3 cut(s) 72, 125, 160
AluI AGCT 3 cut(s) 72, 125, 160
ApeKI GCWGC 1 cut(s) 140
BbvI GCAGC 1 cut(s) 127
BccI CCATC 2 cut(s) 25, 182
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
BmiI GGNNCC 1 cut(s) 285
BmsI GCATC 1 cut(s) 280
Bse3DI GCAATG 1 cut(s) 257
BseGI GGATG 1 cut(s) 145
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 294
BseXI GCAGC 1 cut(s) 127
Bsh1236I CGCG 1 cut(s) 50
BspACI CCGC 1 cut(s) 244
BspCNI CTCAG 1 cut(s) 295
BspFNI CGCG 1 cut(s) 50
BspLI GGNNCC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 257
Bst4CI ACNGT 2 cut(s) 85, 324
BstC8I GCNNGC 1 cut(s) 61
BstDEI CTNAG 1 cut(s) 303
BstF5I GGATG 1 cut(s) 145
BstFNI CGCG 1 cut(s) 50
BstMWI GCNNNNNNNGC 4 cut(s) 56, 69, 166, 268
BstUI CGCG 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 127
BtsCI GGATG 1 cut(s) 145
BtsIMutI CAGTG 2 cut(s) 90, 291
Cac8I GCNNGC 1 cut(s) 61
CviAII CATG 1 cut(s) 204
CviJI RGCY 5 cut(s) 72, 125, 160, 225, 284
CviKI_1 RGCY 5 cut(s) 72, 125, 160, 225, 284
DdeI CTNAG 1 cut(s) 303
FaeI CATG 1 cut(s) 207
FaiI YATR 5 cut(s) 43, 95, 108, 205, 215
FatI CATG 1 cut(s) 203
Fnu4HI GCNGC 1 cut(s) 141
FokI GGATG 1 cut(s) 132
Fsp4HI GCNGC 1 cut(s) 141
GluI GCNGC 1 cut(s) 141
Hin1II CATG 1 cut(s) 207
HindIII AAGCTT 1 cut(s) 70
Hpy188I TCNGA 1 cut(s) 304
HpyAV CCTTC 1 cut(s) 258
HpyCH4III ACNGT 2 cut(s) 85, 324
HpyCH4V TGCA 1 cut(s) 271
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 69, 166, 268
HpyF3I CTNAG 1 cut(s) 303
Hsp92II CATG 1 cut(s) 207
LmnI GCTCC 1 cut(s) 289
LpnPI CCDG 2 cut(s) 73, 198
Lsp1109I GCAGC 1 cut(s) 127
LweI GCATC 1 cut(s) 280
MaeIII GTNAC 1 cut(s) 171
MboII GAAGA 1 cut(s) 241
MmeI TCCRAC 1 cut(s) 298
MnlI CCTC 4 cut(s) 74, 121, 274, 298
MvnI CGCG 1 cut(s) 50
MwoI GCNNNNNNNGC 4 cut(s) 56, 69, 166, 268
NlaIII CATG 1 cut(s) 207
NlaIV GGNNCC 1 cut(s) 285
NmeAIII GCCGAG 1 cut(s) 233
PkrI GCNGC 1 cut(s) 142
PsiI TTATAA 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 285
SatI GCNGC 1 cut(s) 141
SetI ASST 4 cut(s) 74, 127, 162, 269
SfaNI GCATC 1 cut(s) 280
SgeI CNNG 8 cut(s) 61, 72, 149, 176, 178, 197, 216, 265
SsiI CCGC 1 cut(s) 244
TaaI ACNGT 2 cut(s) 85, 324
TaqI TCGA 1 cut(s) 209
TscAI CASTG 2 cut(s) 90, 298
TseI GCWGC 1 cut(s) 140
TspRI CASTG 2 cut(s) 90, 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.