pycom07g04570

Dual specificity phosphatase, catalytic domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
3922362 .. 3924362
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04570.1

Sequence Viewer

Length: 726 bp
ATGGGTGTTAGTCTATGGGTTCGGACAGGGTGGCAGGCAGCAGTATTGTTCGCGTTGTTTGCATGCCTCAAAAGCTCTGGTTTCACAGTGCTTTCCATACCATTTTTGTATGCCTCTTTGGTTTTTGCTTTGGTTTCACTTGCTGCTCATCCATTGATAGACCTTCCCATGCTGTTGGGGAAGAACCCAGATGGGAGTTTCCCCACTTGGTCGATTATAATGTTCAGCCCCTATTTGTATTTCGTCCGCTTCTTCTCGGCATTGCGGAGGATGCAGAGTAGGGAGGCTCCTTACACTGAAATCTCCGAGGGTTTGTTCGTTGGCGGGTGGCCTTCTTCGCTTGATAAACTGCCACCAGGTGACCCTGCCATTGTTGATTGCACTTGTGAATTGCCAAGGAAGTGTGAGGTTACAGGGCATTCTTATTTGTGTGTGCCAACATGGGACACGAGGGCTCCTCAGCCGCCTGCCATTGAATCTGCTGTCAAGTGGGCTTGCCAAAAAAGGGCTCAGAATAAGCCTGTTTTCGTCCACTGCGCCTACGGTCATGGGAGAAGTGTAGCTGTCATGTGTGCACTAATAGTTGCTCTTGGGGTTGAAGAGGACTGGAAAAATGCTGAGAAACTAATTCGAGAGAAACGTCCTTACATTAGGTTGAATGCTCTACACCGCAGGGCTCTGGAAGAGTGGTCAAAACATCGGTTATCTCCTTCTAAGAAGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

242

Amino Acids

27.04

Weight (kDa)

9.23

Isoelectric Point (pI)

48.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 124 - 232 1.4e-10 Dual specificity phosphatase, catalytic domain
Tc-R-P PF22785 138 - 197 1.7e-06 Polymorphic toxin system, DSP-PTPase phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013708)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AccII CGCG 1 cut(s) 53
AciI CCGC 5 cut(s) 247, 265, 324, 464, 670
AdeI CACNNNGTG 1 cut(s) 359
AfiI CCNNNNNNNGG 1 cut(s) 505
AgsI TTSAA 3 cut(s) 476, 599, 658
AjnI CCWGG 1 cut(s) 355
AluBI AGCT 2 cut(s) 75, 563
AluI AGCT 2 cut(s) 75, 563
Alw21I GWGCWC 1 cut(s) 577
Alw44I GTGCAC 1 cut(s) 573
AoxI GGCC 1 cut(s) 329
ApaLI GTGCAC 1 cut(s) 573
ApeKI GCWGC 2 cut(s) 38, 143
AspLEI GCGC 1 cut(s) 539
AsuHPI GGTGA 1 cut(s) 371
BaeGI GKGCMC 1 cut(s) 577
BanII GRGCYC 3 cut(s) 457, 511, 679
BauI CACGAG 1 cut(s) 448
Bbv12I GWGCWC 1 cut(s) 577
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 2 cut(s) 50, 130
BccI CCATC 1 cut(s) 185
BciT130I CCWGG 1 cut(s) 357
BisI GCNGC 3 cut(s) 39, 144, 464
BlsI GCNGC 3 cut(s) 40, 145, 465
Bme1390I CCNGG 1 cut(s) 357
BmiI GGNNCC 2 cut(s) 288, 456
BmrFI CCNGG 1 cut(s) 357
BmsI GCATC 1 cut(s) 261
BplI GAGNNNNNCTC 2 cut(s) 442, 474
Bpu10I CCTNAGC 1 cut(s) 459
BsaJI CCNNGG 2 cut(s) 306, 395
BsaXI ACNNNNNCTCC 2 cut(s) 439, 469
Bsc4I CCNNNNNNNGG 1 cut(s) 505
Bse1I ACTGG 1 cut(s) 611
Bse3DI GCAATG 1 cut(s) 260
BseBI CCWGG 1 cut(s) 357
BseDI CCNNGG 2 cut(s) 306, 395
BseGI GGATG 2 cut(s) 148, 276
BseLI CCNNNNNNNGG 1 cut(s) 505
BseMI GCAATG 1 cut(s) 260
BseMII CTCAG 3 cut(s) 473, 524, 609
BseNI ACTGG 1 cut(s) 611
BseRI GAGGAG 1 cut(s) 447
BseSI GKGCMC 1 cut(s) 577
BseXI GCAGC 2 cut(s) 50, 130
Bsh1236I CGCG 1 cut(s) 53
BshFI GGCC 1 cut(s) 331
BsiHKAI GWGCWC 1 cut(s) 577
BslFI GGGAC 1 cut(s) 458
BslI CCNNNNNNNGG 1 cut(s) 505
BsmFI GGGAC 1 cut(s) 458
BsmI GAATGC 2 cut(s) 418, 664
BsnI GGCC 1 cut(s) 331
Bsp1286I GDGCHC 4 cut(s) 457, 511, 577, 679
BspACI CCGC 5 cut(s) 247, 265, 324, 464, 670
BspANI GGCC 1 cut(s) 331
BspCNI CTCAG 3 cut(s) 472, 523, 610
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 2 cut(s) 288, 456
BsrDI GCAATG 1 cut(s) 260
BsrI ACTGG 1 cut(s) 611
BssECI CCNNGG 2 cut(s) 306, 395
BssSI CACGAG 1 cut(s) 448
BssT1I CCWWGG 1 cut(s) 395
Bst2BI CACGAG 1 cut(s) 448
Bst2UI CCWGG 1 cut(s) 357
Bst4CI ACNGT 2 cut(s) 88, 545
Bst6I CTCTTC 2 cut(s) 594, 678
BstC8I GCNNGC 4 cut(s) 36, 64, 468, 496
BstDEI CTNAG 4 cut(s) 459, 510, 618, 714
BstEII GGTNACC 1 cut(s) 359
BstF5I GGATG 2 cut(s) 148, 276
BstFNI CGCG 1 cut(s) 53
BstHHI GCGC 1 cut(s) 539
BstMWI GCNNNNNNNGC 4 cut(s) 59, 72, 271, 337
BstNI CCWGG 1 cut(s) 357
BstNSI RCATGY 1 cut(s) 66
BstPI GGTNACC 1 cut(s) 359
BstSCI CCNGG 1 cut(s) 355
BstSLI GKGCMC 1 cut(s) 577
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 2 cut(s) 50, 130
BstXI CCANNNNNNTGG 1 cut(s) 175
BsuRI GGCC 1 cut(s) 331
BtsCI GGATG 2 cut(s) 148, 276
BtsI GCAGTG 1 cut(s) 532
BtsIMutI CAGTG 3 cut(s) 93, 294, 532
Cac8I GCNNGC 4 cut(s) 36, 64, 468, 496
CfoI GCGC 1 cut(s) 539
CsiI ACCWGGT 1 cut(s) 355
CviAII CATG 5 cut(s) 63, 169, 441, 548, 568
DdeI CTNAG 4 cut(s) 459, 510, 618, 714
DraIII CACNNNGTG 1 cut(s) 359
Eam1104I CTCTTC 2 cut(s) 594, 678
EarI CTCTTC 2 cut(s) 594, 678
Eco130I CCWWGG 1 cut(s) 395
Eco24I GRGCYC 3 cut(s) 457, 511, 679
Eco91I GGTNACC 1 cut(s) 359
EcoO65I GGTNACC 1 cut(s) 359
EcoRII CCWGG 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 395
EcoT38I GRGCYC 3 cut(s) 457, 511, 679
ErhI CCWWGG 1 cut(s) 395
FaeI CATG 5 cut(s) 66, 172, 444, 551, 571
FaiI YATR 9 cut(s) 16, 64, 98, 111, 170, 218, 442, 549, 569
FaqI GGGAC 1 cut(s) 458
FatI CATG 5 cut(s) 62, 168, 440, 547, 567
FauI CCCGC 1 cut(s) 317
Fnu4HI GCNGC 3 cut(s) 39, 144, 464
FokI GGATG 2 cut(s) 135, 283
FriOI GRGCYC 3 cut(s) 457, 511, 679
Fsp4HI GCNGC 3 cut(s) 39, 144, 464
GlaI GCGC 1 cut(s) 538
GluI GCNGC 3 cut(s) 39, 144, 464
HaeIII GGCC 1 cut(s) 331
HhaI GCGC 1 cut(s) 539
Hin1II CATG 5 cut(s) 66, 172, 444, 551, 571
Hin6I GCGC 1 cut(s) 537
HinP1I GCGC 1 cut(s) 537
HinfI GANTC 1 cut(s) 476
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 2 cut(s) 532, 575
Hpy188I TCNGA 3 cut(s) 24, 307, 513
Hpy188III TCNNGA 2 cut(s) 632, 680
Hpy8I GTNNAC 2 cut(s) 532, 575
HpyAV CCTTC 3 cut(s) 173, 342, 720
HpyCH4III ACNGT 2 cut(s) 88, 545
HpyCH4IV ACGT 1 cut(s) 640
HpyCH4V TGCA 4 cut(s) 62, 274, 381, 575
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 72, 271, 337
HpyF3I CTNAG 4 cut(s) 459, 510, 618, 714
HpySE526I ACGT 1 cut(s) 640
Hsp92II CATG 5 cut(s) 66, 172, 444, 551, 571
HspAI GCGC 1 cut(s) 537
LmnI GCTCC 2 cut(s) 292, 460
Lsp1109I GCAGC 2 cut(s) 50, 130
LweI GCATC 1 cut(s) 261
MabI ACCWGGT 1 cut(s) 355
MaeII ACGT 1 cut(s) 640
MaeIII GTNAC 2 cut(s) 359, 409
MboII GAAGA 5 cut(s) 193, 244, 327, 611, 695
MhlI GDGCHC 4 cut(s) 457, 511, 577, 679
MluCI AATT 3 cut(s) 389, 627, 721
MnlI CCTC 9 cut(s) 77, 124, 261, 277, 301, 400, 444, 468, 595
MspR9I CCNGG 1 cut(s) 357
Mva1269I GAATGC 2 cut(s) 418, 664
MvaI CCWGG 1 cut(s) 357
MvnI CGCG 1 cut(s) 53
MwoI GCNNNNNNNGC 4 cut(s) 59, 72, 271, 337
NlaIII CATG 5 cut(s) 66, 172, 444, 551, 571
NlaIV GGNNCC 2 cut(s) 288, 456
NmeAIII GCCGAG 1 cut(s) 236
NmuCI GTSAC 1 cut(s) 359
NspI RCATGY 1 cut(s) 66
PaeI GCATGC 1 cut(s) 66
PcsI WCGNNNNNNNCGW 1 cut(s) 637
PctI GAATGC 2 cut(s) 418, 664
PfeI GAWTC 1 cut(s) 476
PkrI GCNGC 3 cut(s) 40, 145, 465
PsiI TTATAA 1 cut(s) 218
Psp6I CCWGG 1 cut(s) 355
PspEI GGTNACC 1 cut(s) 359
PspGI CCWGG 1 cut(s) 355
PspN4I GGNNCC 2 cut(s) 288, 456
SatI GCNGC 3 cut(s) 39, 144, 464
ScrFI CCNGG 1 cut(s) 357
SduI GDGCHC 4 cut(s) 457, 511, 577, 679
SetI ASST 7 cut(s) 77, 165, 361, 411, 565, 643, 656
SexAI ACCWGGT 1 cut(s) 355
SfaNI GCATC 1 cut(s) 261
SphI GCATGC 1 cut(s) 66
Sse9I AATT 3 cut(s) 389, 627, 721
SsiI CCGC 5 cut(s) 247, 265, 324, 464, 670
StyD4I CCNGG 1 cut(s) 355
StyI CCWWGG 1 cut(s) 395
TaaI ACNGT 2 cut(s) 88, 545
TaiI ACGT 1 cut(s) 643
TaqI TCGA 2 cut(s) 212, 631
TasI AATT 3 cut(s) 389, 627, 721
TauI GCSGC 1 cut(s) 466
TfiI GAWTC 1 cut(s) 476
TscAI CASTG 3 cut(s) 93, 301, 539
TseFI GTSAC 1 cut(s) 359
TseI GCWGC 2 cut(s) 38, 143
Tsp45I GTSAC 1 cut(s) 359
TspRI CASTG 3 cut(s) 93, 301, 539
VneI GTGCAC 1 cut(s) 573
XceI RCATGY 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.