Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004166

Physical Location & Seq

Genomic Coordinates Forward (+)

8167709 .. 8177939

Gene Structure 10231 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1048100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGCTTCCATATCTTCTCCGACCCCAAGTCCTCACAAGTTCAACTTCCCCAACCCCAAATCATACCCCTCCTCCGTTCCCAAAAGACCTTCCTACCCTTCTTCCCCTTCCTCCCATTCCCAAACCAACTTCTCCTCCAGGTTTCCCAATTCTTCCCTCTGCCGATGCCAGAAGAACCCTTCTTCCTCCTCCGACTCAACCCAGTGGAGATGGGACTCTGCGCTCCAGGACCTCATCAAAAACGCCATCAAAAGCTTCGATTCCTACGTCAATTTTAAACCCCAACCCGACGCCCAATCCGCACCCTCTTACACCGAAGACCTTGATTGGGACTGGGATCGCTGGCGCCACCATTTCCTTGAGGTCGAACAACAAGAGCGCCTTGTCTCCCTTCTCAAGTCACAGTTGGGTCGGGCTGTATATGCAGAGGACTTCGAGGATGCTGCAAGGCTCAAGGTGGCAATTGCCGCTGCAGCTACAAACGACGTCGTGGGCAGAGTCATATCTCATCTCAATAGAGCTGTAGAGGAAGAGCGATACCAGGATGCTGCATTTTTTCGAGATAATGCTGGTGCAGGATTGGTGGGTTGGTGGGCAGGTCTTTCTAAAGATAAGAAGGATCCCCGTGGCTTAATTATTCGAGTAACTGCAGAGCATGGAAGATATGTCGCAAGGAGTTACAGTCCGCGGCAGCTTGCTACTGCTGCAGCTGGTGTTCCACTCTTTGAGATTTATTTAACAGCAAATAAGAATGGTGAATACAGACAGCAGGCTGTGTATTTAAAGCGGGGAGGGGTGTTTCACGATTCTCCACAAGTTAGCTCCAAATCATTGGATGCTAGTAGCAGCTTGAATCCTATAGATTCAACTGAAGAAAAAGGTGATCTGTTTGTTGCAGATAGTGAAGATGCTGAAGATGGTAATGATGGGGATGATGGCTCTGATCTTTCTGAGGATATCTCTGGTTTTCAAAGTATCTTGAGAGATATGATTCCTAATGTGAAGGTCAAGGTCTTGAAAGTGACCTCACCAGGGAAGGTAGACAGGGATCTAATATCGAAAGTGATTGAACAGATTATTGAGGAAGATGATGAAGATAAGGATAGTGAAATAGAGAGTTTAGATGCTGAAGATGAAGAAAAAGTTGAAGGTGATGAAGAGACAGATGTGATAGAACTGGATGCTGATCCTGGAATTATTCAAAATGCAGAGCGACGTGAAATTGCCTTTAAAGTTGTTGTTGGTGATCTTGGGCAGAAACTATCAAGCAGCCCGCCTACTAAAAATTTGCTCCGAGTACCTGCTAAAATGGAGAAGAAGGGACGTTTATCATTTTCCTTTACTGTTGAGAAAGATATTAACCAACAGGATTCCCGTGGAAAGGAACGGTCTTCTGTAGATAAGAAAGCTAAACTTGGAGGTCAGCGAAGCATTGACAATGTTATGTTTGATCTGTCTAAGTTCATGGGTAAAGAGAAGATACCACTTAAGGTACTCAAAGATGTTGGCGAGTTAATAAATCTTGCTCTCAGCCAGGTTAACAACCATCAACCACTGTCAGGATCAACCACTTTCAATCGCATTGAAATGCCAGCTTCTCTAGATCCTTTAAATGGGCTTTACATTGGTGCACATGGGCTCTACACCTCAGAAGTTATTCACCTGAGACGTAAATTTGGTCAATGGAAAGAGGATGGTGGGACTCAAGAACCTCTAAACCTTGAGTTTTATGAATATGTAGAAGCCTTAAAACTTACTGGGGATCCTTATGTACCAGCTGGCCAGGTGGCATTTCGTGCAAAGATTGGGAAAGGATATCAGCTTCCTCATAAAGGGATTATACCAGAAGAATTTGGAGTGGTTGCTCGATATAAAGGACAGGGGAGGCTTGCTGAGCCAGGGTTTCGCAATCCCCGATGGGTTGATGGTGAACTTGTTGTTCTTGATGGGAAGTACATAAAGGGTGGACCTGTTGTTGGATTTGTTTACTGGGATCCTGAGTATCATTTCTTGGTCTTCTTCAATCGATTGAGGCTTCAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

682

Amino Acids

76.07

Weight (kDa)

5.4

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	525 - 679	1.6e-29	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004166)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33630 AT4G33630 AT4G33630
fragaria_vesca	FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660
malus_domestica	MD05G1048100.v1.1 MD10G1054700.v1.1
prunus_persica	Prupe.8G070300_v2.0.a1 Prupe.8G070300_v2.0.a1
pyrus_communis	pycom10g04160 pycom10g04170
rosa_chinensis	RchiOBHm_Chr6g0270901 RchiOBHm_Chr6g0270911
rosa_laevigata	RLG00000013760
rosa_multiflora	Rmu_co8045566.1_g000001 Rmu_sc0007274.1_g000002 Rmu_ssc0000474.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197500
rosa_rugosa	Rorug06G0057200
rosa_samantha	Rh6AG176700 Rh6BG180100 Rh6CG176200 Rh6DG168400
rosa_wichuraiana	Rw6G015060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	489
Acc36I	ACCTGC	2 cut(s)	587, 1309
AccB1I	GGYRCC	1 cut(s)	345
AccI	GTMKAC	1 cut(s)	1041
AccII	CGCG	1 cut(s)	688
AciI	CCGC	6 cut(s)	300, 468, 686, 688, 787, 1274
AcoI	YGGCCR	1 cut(s)	1780
AcsI	RAATTY	3 cut(s)	1285, 1673, 1850
AcuI	CTGAAG	3 cut(s)	891, 933, 1149
AcyI	GRCGYC	3 cut(s)	291, 346, 486
AfaI	GTAC	4 cut(s)	1299, 1494, 1773, 1955
AfiI	CCNNNNNNNGG	7 cut(s)	328, 1032, 1381, 1559, 1613, 1832, 1976
AflII	CTTAAG	1 cut(s)	1487
AhdI	GACNNNNNGTC	1 cut(s)	27
AjiI	CACGTC	1 cut(s)	1217
AjnI	CCWGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
AloI	GAACNNNNNNTCC	2 cut(s)	167, 199
Alw21I	GWGCWC	1 cut(s)	1633
Alw26I	GTCTC	3 cut(s)	391, 1154, 1660
Alw44I	GTGCAC	1 cut(s)	1629
AoxI	GGCC	1 cut(s)	1780
ApaLI	GTGCAC	1 cut(s)	1629
ApeKI	GCWGC	9 cut(s)	443, 470, 473, 548, 691, 704, 707, 846, 1269
ApoI	RAATTY	3 cut(s)	1285, 1673, 1850
Asp700I	GAANNNNTTC	1 cut(s)	1656
AspLEI	GCGC	3 cut(s)	223, 348, 381
AspS9I	GGNCC	2 cut(s)	229, 1967
AsuHPI	GGTGA	7 cut(s)	767, 893, 1020, 1163, 1256, 1652, 1940
AvaII	GGWCC	2 cut(s)	229, 1967
BaeGI	GKGCMC	1 cut(s)	1633
BalI	TGGCCA	1 cut(s)	1782
BamHI	GGATCC	3 cut(s)	619, 1762, 1993
BanI	GGYRCC	1 cut(s)	345
BanII	GRGCYC	1 cut(s)	1641
BbsI	GAAGAC	3 cut(s)	324, 1383, 2008
Bbv12I	GWGCWC	1 cut(s)	1633
BbvI	GCAGC	9 cut(s)	430, 457, 485, 535, 691, 703, 719, 858, 1281
BcgI	CGANNNNNNTGC	2 cut(s)	425, 459
BciT130I	CCWGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
BcoDI	GTCTC	3 cut(s)	391, 1154, 1660
BfaI	CTAG	2 cut(s)	840, 1601
BfmI	CTRYAG	6 cut(s)	471, 522, 648, 705, 858, 1395
BfoI	RGCGCY	2 cut(s)	349, 382
BfrI	CTTAAG	1 cut(s)	1487
BfuAI	ACCTGC	2 cut(s)	587, 1309
BlpI	GCTNAGC	1 cut(s)	1893
Bme1390I	CCNGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
Bme18I	GGWCC	2 cut(s)	229, 1967
BmeRI	GACNNNNNGTC	1 cut(s)	27
BmgBI	CACGTC	1 cut(s)	1217
BmgT120I	GGNCC	2 cut(s)	229, 1967
BmiI	GGNNCC	4 cut(s)	347, 621, 1764, 1995
BmrFI	CCNGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
BmrI	ACTGGG	4 cut(s)	196, 343, 1767, 1999
BmsI	GCATC	7 cut(s)	155, 430, 535, 826, 898, 1114, 1171
BmuI	ACTGGG	4 cut(s)	196, 343, 1767, 1999
BpiI	GAAGAC	3 cut(s)	324, 1383, 2008
BplI	GAGNNNNNCTC	2 cut(s)	944, 976
BpmI	CTGGAG	2 cut(s)	121, 209
Bpu1102I	GCTNAGC	1 cut(s)	1893
BpuEI	CTTGAG	6 cut(s)	380, 380, 437, 1000, 1689, 1742
Bsa29I	ATCGAT	1 cut(s)	2026
BsaBI	GATNNNNATC	1 cut(s)	1185
BsaHI	GRCGYC	3 cut(s)	291, 346, 486
BsaJI	CCNNGG	5 cut(s)	625, 686, 1031, 1375, 1898
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 86, 119, 149, 667, 697
Bsc4I	CCNNNNNNNGG	7 cut(s)	328, 1032, 1381, 1559, 1613, 1832, 1976
Bse1I	ACTGG	5 cut(s)	202, 338, 1182, 1762, 1994
Bse8I	GATNNNNATC	1 cut(s)	1185
BseBI	CCWGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
BseCI	ATCGAT	1 cut(s)	2026
BseDI	CCNNGG	5 cut(s)	625, 686, 1031, 1375, 1898
BseGI	GGATG	6 cut(s)	445, 550, 841, 937, 1186, 1699
BseJI	GATNNNNATC	1 cut(s)	1185
BseLI	CCNNNNNNNGG	7 cut(s)	328, 1032, 1381, 1559, 1613, 1832, 1976
BseMII	CTCAG	6 cut(s)	942, 1543, 1655, 1662, 1884, 1989
BseNI	ACTGG	5 cut(s)	202, 338, 1182, 1762, 1994
BseRI	GAGGAG	3 cut(s)	61, 124, 178
BseSI	GKGCMC	1 cut(s)	1633
BseXI	GCAGC	9 cut(s)	430, 457, 485, 535, 691, 703, 719, 858, 1281
BsgI	GTGCAG	1 cut(s)	594
Bsh1236I	CGCG	1 cut(s)	688
BshFI	GGCC	1 cut(s)	1782
BshNI	GGYRCC	1 cut(s)	345
BshVI	ATCGAT	1 cut(s)	2026
BsiHKAI	GWGCWC	1 cut(s)	1633
BslFI	GGGAC	4 cut(s)	227, 344, 1335, 1714
BslI	CCNNNNNNNGG	7 cut(s)	328, 1032, 1381, 1559, 1613, 1832, 1976
BsmAI	GTCTC	3 cut(s)	391, 1154, 1660
BsmBI	CGTCTC	1 cut(s)	1660
BsmFI	GGGAC	4 cut(s)	227, 344, 1335, 1714
BsnI	GGCC	1 cut(s)	1782
Bsp1286I	GDGCHC	2 cut(s)	1633, 1641
Bsp1720I	GCTNAGC	1 cut(s)	1893
BspACI	CCGC	6 cut(s)	300, 468, 686, 688, 787, 1274
BspANI	GGCC	1 cut(s)	1782
BspCNI	CTCAG	6 cut(s)	943, 1542, 1656, 1661, 1885, 1990
BspDI	ATCGAT	1 cut(s)	2026
BspFNI	CGCG	1 cut(s)	688
BspLI	GGNNCC	4 cut(s)	347, 621, 1764, 1995
BspMAI	CTGCAG	3 cut(s)	475, 652, 709
BspMI	ACCTGC	2 cut(s)	587, 1309
BspQI	GCTCTTC	1 cut(s)	525
BspT107I	GGYRCC	1 cut(s)	345
BspTI	CTTAAG	1 cut(s)	1487
BsrI	ACTGG	5 cut(s)	202, 338, 1182, 1762, 1994
BssECI	CCNNGG	5 cut(s)	625, 686, 1031, 1375, 1898
BssNI	GRCGYC	3 cut(s)	291, 346, 486
Bst2UI	CCWGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
Bst4CI	ACNGT	5 cut(s)	405, 683, 1345, 1389, 1557
Bst6I	CTCTTC	2 cut(s)	525, 1152
BstACI	GRCGYC	3 cut(s)	291, 346, 486
BstAFI	CTTAAG	1 cut(s)	1487
BstAPI	GCANNNNNTGC	1 cut(s)	1796
BstC8I	GCNNGC	7 cut(s)	344, 696, 771, 1274, 1593, 1780, 1890
BstDEI	CTNAG	7 cut(s)	951, 1458, 1529, 1648, 1664, 1893, 1998
BstDSI	CCRYGG	3 cut(s)	625, 686, 1375
BstENI	CCTNNNNNAGG	1 cut(s)	1830
BstF5I	GGATG	6 cut(s)	445, 550, 841, 937, 1186, 1699
BstFNI	CGCG	1 cut(s)	688
BstH2I	RGCGCY	2 cut(s)	349, 382
BstHHI	GCGC	3 cut(s)	223, 348, 381
BstMAI	GTCTC	3 cut(s)	391, 1154, 1660
BstMWI	GCNNNNNNNGC	7 cut(s)	299, 422, 467, 473, 704, 1796, 1894
BstNI	CCWGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
BstSCI	CCNGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
BstSFI	CTRYAG	6 cut(s)	471, 522, 648, 705, 858, 1395
BstSLI	GKGCMC	1 cut(s)	1633
BstUI	CGCG	1 cut(s)	688
BstV1I	GCAGC	9 cut(s)	430, 457, 485, 535, 691, 703, 719, 858, 1281
BstV2I	GAAGAC	3 cut(s)	324, 1383, 2008
BstX2I	RGATCY	5 cut(s)	619, 1048, 1603, 1762, 1993
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstYI	RGATCY	5 cut(s)	619, 1048, 1603, 1762, 1993
Bsu15I	ATCGAT	1 cut(s)	2026
BsuRI	GGCC	1 cut(s)	1782
BsuTUI	ATCGAT	1 cut(s)	2026
BtgI	CCRYGG	3 cut(s)	625, 686, 1375
BtrI	CACGTC	1 cut(s)	1217
BtsCI	GGATG	6 cut(s)	445, 550, 841, 937, 1186, 1699
BtsIMutI	CAGTG	2 cut(s)	209, 1553
BveI	ACCTGC	2 cut(s)	587, 1309
Cac8I	GCNNGC	7 cut(s)	344, 696, 771, 1274, 1593, 1780, 1890
CfoI	GCGC	3 cut(s)	223, 348, 381
Cfr13I	GGNCC	2 cut(s)	229, 1967
Cfr42I	CCGCGG	1 cut(s)	689
ClaI	ATCGAT	1 cut(s)	2026
CseI	GACGC	1 cut(s)	299
Csp6I	GTAC	4 cut(s)	1298, 1493, 1772, 1954
CviAII	CATG	3 cut(s)	656, 1465, 1634
CviQI	GTAC	4 cut(s)	1298, 1493, 1772, 1954
DdeI	CTNAG	7 cut(s)	951, 1458, 1529, 1648, 1664, 1893, 1998
DinI	GGCGCC	1 cut(s)	347
DraI	TTTAAA	4 cut(s)	277, 783, 1231, 1611
DriI	GACNNNNNGTC	1 cut(s)	27
EaeI	YGGCCR	1 cut(s)	1780
Eam1104I	CTCTTC	2 cut(s)	525, 1152
Eam1105I	GACNNNNNGTC	1 cut(s)	27
EarI	CTCTTC	2 cut(s)	525, 1152
Eco24I	GRGCYC	1 cut(s)	1641
Eco32I	GATATC	2 cut(s)	958, 1817
Eco47I	GGWCC	2 cut(s)	229, 1967
Eco57I	CTGAAG	3 cut(s)	891, 933, 1149
EcoNI	CCTNNNNNAGG	1 cut(s)	1830
EcoO109I	RGGNCCY	1 cut(s)	229
EcoRII	CCWGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
EcoRV	GATATC	2 cut(s)	958, 1817
EcoT38I	GRGCYC	1 cut(s)	1641
EgeI	GGCGCC	1 cut(s)	347
EheI	GGCGCC	1 cut(s)	347
Esp3I	CGTCTC	1 cut(s)	1660
FaeI	CATG	3 cut(s)	659, 1468, 1637
FalI	AAGNNNNNCTT	6 cut(s)	29, 61, 366, 398, 1398, 1430
FaqI	GGGAC	4 cut(s)	227, 344, 1335, 1714
FatI	CATG	3 cut(s)	655, 1464, 1633
FauI	CCCGC	2 cut(s)	780, 1281
FblI	GTMKAC	1 cut(s)	1041
FokI	GGATG	6 cut(s)	452, 557, 848, 944, 1193, 1706
FriOI	GRGCYC	1 cut(s)	1641
FspBI	CTAG	2 cut(s)	840, 1601
GlaI	GCGC	3 cut(s)	222, 347, 380
GsuI	CTGGAG	2 cut(s)	121, 209
HaeII	RGCGCY	2 cut(s)	349, 382
HaeIII	GGCC	1 cut(s)	1782
HgaI	GACGC	1 cut(s)	299
HhaI	GCGC	3 cut(s)	223, 348, 381
Hin1I	GRCGYC	3 cut(s)	291, 346, 486
Hin1II	CATG	3 cut(s)	659, 1468, 1637
Hin6I	GCGC	3 cut(s)	221, 346, 379
HinP1I	GCGC	3 cut(s)	221, 346, 379
HincII	GTYRAC	1 cut(s)	1540
HindII	GTYRAC	1 cut(s)	1540
HindIII	AAGCTT	1 cut(s)	253
HpaI	GTTAAC	1 cut(s)	1540
HphI	GGTGA	7 cut(s)	767, 893, 1020, 1163, 1256, 1652, 1940
Hpy166II	GTNNAC	6 cut(s)	1042, 1540, 1631, 1931, 1967, 1987
Hpy188I	TCNGA	6 cut(s)	21, 193, 943, 952, 1295, 1651
Hpy8I	GTNNAC	6 cut(s)	1042, 1540, 1631, 1931, 1967, 1987
Hpy99I	CGWCG	4 cut(s)	293, 488, 491, 1218
HpyCH4III	ACNGT	5 cut(s)	405, 683, 1345, 1389, 1557
HpyCH4IV	ACGT	5 cut(s)	267, 486, 1216, 1324, 1669
HpyF10VI	GCNNNNNNNGC	7 cut(s)	299, 422, 467, 473, 704, 1796, 1894
HpyF3I	CTNAG	7 cut(s)	951, 1458, 1529, 1648, 1664, 1893, 1998
HpySE526I	ACGT	5 cut(s)	267, 486, 1216, 1324, 1669
Hsp92I	GRCGYC	3 cut(s)	291, 346, 486
Hsp92II	CATG	3 cut(s)	659, 1468, 1637
HspAI	GCGC	3 cut(s)	221, 346, 379
KasI	GGCGCC	1 cut(s)	345
KspAI	GTTAAC	1 cut(s)	1540
KspI	CCGCGG	1 cut(s)	689
LguI	GCTCTTC	1 cut(s)	525
LmnI	GCTCC	3 cut(s)	228, 827, 1296
Lsp1109I	GCAGC	9 cut(s)	430, 457, 485, 535, 691, 703, 719, 858, 1281
LweI	GCATC	7 cut(s)	155, 430, 535, 826, 898, 1114, 1171
MaeI	CTAG	2 cut(s)	840, 1601
MaeII	ACGT	5 cut(s)	267, 486, 1216, 1324, 1669
MaeIII	GTNAC	4 cut(s)	399, 643, 677, 1021
MfeI	CAATTG	1 cut(s)	462
MflI	RGATCY	5 cut(s)	619, 1048, 1603, 1762, 1993
MhlI	GDGCHC	2 cut(s)	1633, 1641
MlsI	TGGCCA	1 cut(s)	1782
MluCI	AATT	9 cut(s)	148, 271, 462, 633, 1194, 1221, 1285, 1673, 1850
MluNI	TGGCCA	1 cut(s)	1782
Mly113I	GGCGCC	1 cut(s)	346
MlyI	GAGTC	4 cut(s)	188, 209, 507, 1696
MmeI	TCCRAC	3 cut(s)	44, 216, 1957
Mox20I	TGGCCA	1 cut(s)	1782
MroXI	GAANNNNTTC	1 cut(s)	1656
MscI	TGGCCA	1 cut(s)	1782
MslI	CAYNNNNRTG	1 cut(s)	1586
Msp20I	TGGCCA	1 cut(s)	1782
MspA1I	CMGCKG	4 cut(s)	470, 688, 710, 1778
MspCI	CTTAAG	1 cut(s)	1487
MspR9I	CCNGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
MunI	CAATTG	1 cut(s)	462
MvaI	CCWGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
MvnI	CGCG	1 cut(s)	688
MwoI	GCNNNNNNNGC	7 cut(s)	299, 422, 467, 473, 704, 1796, 1894
NarI	GGCGCC	1 cut(s)	346
NlaIII	CATG	3 cut(s)	659, 1468, 1637
NlaIV	GGNNCC	4 cut(s)	347, 621, 1764, 1995
NmuCI	GTSAC	2 cut(s)	399, 1021
PciSI	GCTCTTC	1 cut(s)	525
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 1912
PdmI	GAANNNNTTC	1 cut(s)	1656
PfeI	GAWTC	6 cut(s)	260, 806, 853, 863, 991, 1370
PfoI	TCCNGGA	2 cut(s)	225, 1189
PleI	GAGTC	4 cut(s)	188, 209, 506, 1696
PluTI	GGCGCC	1 cut(s)	349
PpsI	GAGTC	4 cut(s)	188, 209, 506, 1696
PpuMI	RGGWCCY	1 cut(s)	229
Psp5II	RGGWCCY	1 cut(s)	229
Psp6I	CCWGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
PspGI	CCWGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
PspN4I	GGNNCC	4 cut(s)	347, 621, 1764, 1995
PspPI	GGNCC	2 cut(s)	229, 1967
PspPPI	RGGWCCY	1 cut(s)	229
PstI	CTGCAG	3 cut(s)	475, 652, 709
PsuI	RGATCY	5 cut(s)	619, 1048, 1603, 1762, 1993
PvuII	CAGCTG	2 cut(s)	710, 1778
RsaI	GTAC	4 cut(s)	1299, 1494, 1773, 1955
RsaNI	GTAC	4 cut(s)	1298, 1493, 1772, 1954
RseI	CAYNNNNRTG	1 cut(s)	1586
SacII	CCGCGG	1 cut(s)	689
SapI	GCTCTTC	1 cut(s)	525
Sau96I	GGNCC	2 cut(s)	229, 1967
SchI	GAGTC	4 cut(s)	188, 209, 507, 1696
ScrFI	CCNGG	8 cut(s)	139, 227, 542, 1032, 1191, 1535, 1784, 1899
SduI	GDGCHC	2 cut(s)	1633, 1641
SfaNI	GCATC	7 cut(s)	155, 430, 535, 826, 898, 1114, 1171
SfcI	CTRYAG	6 cut(s)	471, 522, 648, 705, 858, 1395
SfoI	GGCGCC	1 cut(s)	347
Sfr303I	CCGCGG	1 cut(s)	689
SgrBI	CCGCGG	1 cut(s)	689
SinI	GGWCC	2 cut(s)	229, 1967
SmiMI	CAYNNNNRTG	1 cut(s)	1586
SmlI	CTYRAG	7 cut(s)	359, 395, 452, 979, 1487, 1704, 1721
SmoI	CTYRAG	7 cut(s)	359, 395, 452, 979, 1487, 1704, 1721
Sse9I	AATT	9 cut(s)	148, 271, 462, 633, 1194, 1221, 1285, 1673, 1850
SsiI	CCGC	6 cut(s)	300, 468, 686, 688, 787, 1274
SspDI	GGCGCC	1 cut(s)	345
SspMI	CTAG	2 cut(s)	840, 1601
StyD4I	CCNGG	8 cut(s)	137, 225, 540, 1030, 1189, 1533, 1782, 1897
TaaI	ACNGT	5 cut(s)	405, 683, 1345, 1389, 1557
TaiI	ACGT	5 cut(s)	270, 489, 1219, 1327, 1672
TaqI	TCGA	8 cut(s)	258, 366, 435, 559, 640, 1058, 1867, 2026
TasI	AATT	9 cut(s)	148, 271, 462, 633, 1194, 1221, 1285, 1673, 1850
TatI	WGTACW	1 cut(s)	1953
TauI	GCSGC	2 cut(s)	470, 691
TfiI	GAWTC	6 cut(s)	260, 806, 853, 863, 991, 1370
TscAI	CASTG	2 cut(s)	209, 1560
TseFI	GTSAC	2 cut(s)	399, 1021
TseI	GCWGC	9 cut(s)	443, 470, 473, 548, 691, 704, 707, 846, 1269
Tsp45I	GTSAC	2 cut(s)	399, 1021
TspDTI	ATGAA	5 cut(s)	1107, 1149, 1170, 1453, 1746
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	2 cut(s)	209, 1560
Vha464I	CTTAAG	1 cut(s)	1487
VneI	GTGCAC	1 cut(s)	1629
VpaK11BI	GGWCC	2 cut(s)	229, 1967
XagI	CCTNNNNNAGG	1 cut(s)	1830
XapI	RAATTY	3 cut(s)	1285, 1673, 1850
XbaI	TCTAGA	1 cut(s)	1600
XmiI	GTMKAC	1 cut(s)	1041
XmnI	GAANNNNTTC	1 cut(s)	1656
XspI	CTAG	2 cut(s)	840, 1601
ZraI	GACGTC	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.