Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004166

Physical Location & Seq

Genomic Coordinates Forward (+)

7471154 .. 7484495

Gene Structure 13342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1054700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGCTTCCGTATCTGCTCCAACCCCAAGTCCTCACAAGCTCAACTTTCCCAACCCCAAACCATACCCCTCCTCCGTCGCCAAAAGACCATTCCACCCTTCCTCCCATCCCCAAACCACCTCCTCCTCGAGGTTTCCCCATTCGTCCCTCTGCCGATGCCAGAAGACCCCTTCTTCCTCCTCCGACTCAACTCAGTGGAGATGGGACTCTGCGCTCCAGAACCTCATAAAAAGCGCCATCAAAAGCTTCGATTCTTACGTCAATTTTAAACCACAACCAGACGCCCAATCCGCATCGTTTCAGACCGACGACCCTGATTGGGACTGGGATCGCTGGCGCCGCCATTTCTTAGAGGTCGAACAACAAGAGCGCCTTGTCTCCCTTCTCAAGTCGCAGTTGCGTCGGGCTGTATCTGCAGAGGACTTTGAGGATGCTGCGAGACTCAAGGTTGCAATTGCCGCTGCAGCTACAAACGACGTCGTTGGCAGAGTCATTTCTCATCTCAATAGAGCTATACAGGAAGAACGATACCAGGACGCCGCATTTTTCCGAGATAATGCTGGTGCCGGATTGGTGGGTTGGTGGGCTGGTCTTTCTGAAGATAAGAAGGATCCCCGTGGCATAATTATTCGAGTGACTGCGGAGCATGGAAGATATGTCGCAAGGAGTTACAGTCCCCGGCAGCTTGCTACTGCTGCAGCTGGTGTTCCACTCTTTGAGATTTATTTAACAGCAAATAAGAATGGTGAATACAGACAGCAGGCTGTGTATTTAAAGCAGGGAGGGGTGTTTCAGGATTCTTCACAAGTTAGCTCCAAATCATTGGATGCCAGTGGCAGCTTGAATCCCTTTGATTCAACTGAAGAAAAAGGTGATATATTTGTTGCAGATGGTGAAGATGCAGATGATGGCTCTGATCTTTCTGAGGACATCTCTGGTTTTCAAAGTTTCTTGAGAGATATAATTCCTAATGTGAAGGTCAAGGTTTTGAAAGTGACCTCACCAGGGAAGGTAGACAGGGATCTAATATCGAAAGTGATTGAACAGATTATTGAGGAAGATGATGAAGATAAAGATAGTGAAATAGAGAGTTTAGATGCTGAAGATGAAGAACAGGTTGAAGGTGACGAAGAGACAGATGTCATTGAACTGGATGCTGATCCTGGAATTATTCAAAATGCAGAACGACGTGAAATTGCTGTCAAAGTTGTTGTTGGTGGTCTTGGGCAGAGACTATCAAGCAAACCGCCTACTAAAAATTTGCTCCGAGTACCTGCTAAAATAGAGAAGAAGGGAAGTTTATCATTTTCCTTTACTGTTGAGAAAGATATTAACCAACAGAATTCCCGTGGAAAGGAACAGTCTTCTGTGGATAAAAAAGCTAAACTTGGAGGTCAACGAAGCATTGATAATGTTATGTTTGATCTCTCTAAGTTCATGGGTAAAGAGAAGATACCACAGAAGGTACTCAAAGATGTCGGCGAGTTAATAAATCTTGCTCTCAGCCAGGTTAACAACCATCAACCACTGTCAGGAACAACCACTTTCAATCGCATTGAAATGCGGGCTTCACCAGATCCTTTAAATGGGATTTACATTGGTGCACATGGGCTCCACACCTCAGAAGTTATTCGCCTGAGACGTAAATTTGGTCAATGGAAAGAGGATGGAGGGACTGAAGAGCCTCTAAACCTTGAGTTTTATGAATATTTAGAAGCCTTAAAACTTACTGGGGATCCTTATGTACCTGCTGGCCAGGTGGCATTTCGTGCAAAGATTGGGAAAGGATATCAGCTTCCTCATAAAGGGATTATACCAGAAGAATTTGGAGTGGTTGCTCGATATAAAGGACAGGGGAGGCTTGCTGAGCCAGGGTTTCGCAATCCCCGATGGGTCGATGGTGAACTTGTTATTCTTGACGGGAAGTACATTAAGGGTGGACCTGTTGTTGGATTTGTTTACTGGGCTCCCGAGTATCATTTCTTGGCGTTCTTCAATCGGTTGAGGCTTCAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

673

Amino Acids

74.94

Weight (kDa)

5.74

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	517 - 670	1.3e-28	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004166)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33630 AT4G33630 AT4G33630
fragaria_vesca	FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660
malus_domestica	MD05G1048100.v1.1 MD10G1054700.v1.1
prunus_persica	Prupe.8G070300_v2.0.a1 Prupe.8G070300_v2.0.a1
pyrus_communis	pycom10g04160 pycom10g04170
rosa_chinensis	RchiOBHm_Chr6g0270901 RchiOBHm_Chr6g0270911
rosa_laevigata	RLG00000013760
rosa_multiflora	Rmu_co8045566.1_g000001 Rmu_sc0007274.1_g000002 Rmu_ssc0000474.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197500
rosa_rugosa	Rorug06G0057200
rosa_samantha	Rh6AG176700 Rh6BG180100 Rh6CG176200 Rh6DG168400
rosa_wichuraiana	Rw6G015060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	480
AbsI	CCTCGAGG	1 cut(s)	127
Acc36I	ACCTGC	2 cut(s)	1282, 1756
AccB1I	GGYRCC	2 cut(s)	336, 563
AccI	GTMKAC	1 cut(s)	1014
AciI	CCGC	7 cut(s)	291, 340, 459, 540, 641, 1247, 1564
AclWI	GGATC	8 cut(s)	336, 605, 618, 1029, 1154, 1571, 1730, 1743
AcoI	YGGCCR	1 cut(s)	1753
AcsI	RAATTY	4 cut(s)	1258, 1342, 1646, 1823
AcuI	CTGAAG	4 cut(s)	618, 882, 1122, 1698
AcyI	GRCGYC	4 cut(s)	282, 337, 477, 537
AfaI	GTAC	4 cut(s)	1272, 1467, 1746, 1928
AfiI	CCNNNNNNNGG	8 cut(s)	129, 319, 1005, 1354, 1532, 1586, 1805, 1949
AjiI	CACGTC	1 cut(s)	1190
AjnI	CCWGG	6 cut(s)	531, 1003, 1162, 1506, 1755, 1870
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
Alw21I	GWGCWC	1 cut(s)	1606
Alw26I	GTCTC	5 cut(s)	382, 433, 1127, 1225, 1633
Alw44I	GTGCAC	1 cut(s)	1602
AlwI	GGATC	8 cut(s)	336, 605, 618, 1029, 1154, 1571, 1730, 1743
Ama87I	CYCGRG	2 cut(s)	127, 1970
AoxI	GGCC	1 cut(s)	1753
ApaLI	GTGCAC	1 cut(s)	1602
ApeKI	GCWGC	7 cut(s)	434, 461, 464, 682, 695, 698, 837
ApoI	RAATTY	4 cut(s)	1258, 1342, 1646, 1823
Asp700I	GAANNNNTTC	1 cut(s)	1629
AspLEI	GCGC	4 cut(s)	214, 236, 339, 372
AspS9I	GGNCC	1 cut(s)	1940
AsuC2I	CCSGG	1 cut(s)	679
AsuHPI	GGTGA	7 cut(s)	758, 884, 905, 993, 1136, 1563, 1913
AvaI	CYCGRG	2 cut(s)	127, 1970
AvaII	GGWCC	1 cut(s)	1940
BaeGI	GKGCMC	1 cut(s)	1606
BalI	TGGCCA	1 cut(s)	1755
BamHI	GGATCC	2 cut(s)	610, 1735
BanI	GGYRCC	2 cut(s)	336, 563
BanII	GRGCYC	2 cut(s)	1614, 1969
BbsI	GAAGAC	2 cut(s)	170, 1356
Bbv12I	GWGCWC	1 cut(s)	1606
BbvI	GCAGC	7 cut(s)	421, 448, 476, 682, 694, 710, 849
BccI	CCATC	9 cut(s)	114, 195, 245, 884, 902, 1527, 1661, 1884, 1892
BcgI	CGANNNNNNTGC	2 cut(s)	383, 417
BciT130I	CCWGG	6 cut(s)	533, 1005, 1164, 1508, 1757, 1872
BcnI	CCSGG	1 cut(s)	679
BcoDI	GTCTC	5 cut(s)	382, 433, 1127, 1225, 1633
BfmI	CTRYAG	3 cut(s)	414, 462, 696
BfoI	RGCGCY	3 cut(s)	237, 340, 373
BfuAI	ACCTGC	2 cut(s)	1282, 1756
BlpI	GCTNAGC	1 cut(s)	1866
Bme1390I	CCNGG	7 cut(s)	533, 679, 1005, 1164, 1508, 1757, 1872
Bme18I	GGWCC	1 cut(s)	1940
BmeT110I	CYCGRG	2 cut(s)	127, 1970
BmgBI	CACGTC	1 cut(s)	1190
BmgT120I	GGNCC	1 cut(s)	1940
BmiI	GGNNCC	6 cut(s)	338, 565, 612, 1613, 1737, 1968
BmrFI	CCNGG	7 cut(s)	533, 679, 1005, 1164, 1508, 1757, 1872
BmrI	ACTGGG	3 cut(s)	334, 1740, 1972
BmsI	GCATC	7 cut(s)	146, 302, 421, 817, 889, 1087, 1144
BmuI	ACTGGG	3 cut(s)	334, 1740, 1972
BoxI	GACNNNNGTC	1 cut(s)	1139
BpiI	GAAGAC	2 cut(s)	170, 1356
BplI	GAGNNNNNCTC	2 cut(s)	917, 949
BpmI	CTGGAG	1 cut(s)	200
Bpu1102I	GCTNAGC	1 cut(s)	1866
BpuEI	CTTGAG	4 cut(s)	371, 428, 973, 1715
BpuMI	CCSGG	1 cut(s)	679
BsaBI	GATNNNNATC	1 cut(s)	1158
BsaHI	GRCGYC	4 cut(s)	282, 337, 477, 537
BsaJI	CCNNGG	5 cut(s)	616, 677, 1004, 1348, 1871
BsaXI	ACNNNNNCTCC	8 cut(s)	56, 86, 86, 116, 658, 688, 1596, 1626
Bsc4I	CCNNNNNNNGG	8 cut(s)	129, 319, 1005, 1354, 1532, 1586, 1805, 1949
Bse1I	ACTGG	5 cut(s)	329, 831, 1155, 1735, 1967
Bse8I	GATNNNNATC	1 cut(s)	1158
BseBI	CCWGG	6 cut(s)	533, 1005, 1164, 1508, 1757, 1872
BseDI	CCNNGG	5 cut(s)	616, 677, 1004, 1348, 1871
BseGI	GGATG	5 cut(s)	106, 436, 832, 1159, 1672
BseJI	GATNNNNATC	1 cut(s)	1158
BseLI	CCNNNNNNNGG	8 cut(s)	129, 319, 1005, 1354, 1532, 1586, 1805, 1949
BseMII	CTCAG	6 cut(s)	206, 915, 1516, 1628, 1635, 1857
BseNI	ACTGG	5 cut(s)	329, 831, 1155, 1735, 1967
BseRI	GAGGAG	4 cut(s)	61, 112, 115, 169
BseSI	GKGCMC	1 cut(s)	1606
BseXI	GCAGC	7 cut(s)	421, 448, 476, 682, 694, 710, 849
BshFI	GGCC	1 cut(s)	1755
BshNI	GGYRCC	2 cut(s)	336, 563
BsiHKAI	GWGCWC	1 cut(s)	1606
BsiHKCI	CYCGRG	2 cut(s)	127, 1970
BsiSI	CCGG	2 cut(s)	567, 679
BslFI	GGGAC	5 cut(s)	130, 218, 335, 660, 1687
BslI	CCNNNNNNNGG	8 cut(s)	129, 319, 1005, 1354, 1532, 1586, 1805, 1949
BsmAI	GTCTC	5 cut(s)	382, 433, 1127, 1225, 1633
BsmBI	CGTCTC	1 cut(s)	1633
BsmFI	GGGAC	5 cut(s)	130, 218, 335, 660, 1687
BsnI	GGCC	1 cut(s)	1755
BsoBI	CYCGRG	2 cut(s)	127, 1970
Bsp1286I	GDGCHC	3 cut(s)	1606, 1614, 1969
Bsp143I	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
Bsp1720I	GCTNAGC	1 cut(s)	1866
BspACI	CCGC	7 cut(s)	291, 340, 459, 540, 641, 1247, 1564
BspANI	GGCC	1 cut(s)	1755
BspCNI	CTCAG	6 cut(s)	205, 916, 1515, 1629, 1634, 1858
BspLI	GGNNCC	6 cut(s)	338, 565, 612, 1613, 1737, 1968
BspMAI	CTGCAG	3 cut(s)	418, 466, 700
BspMI	ACCTGC	2 cut(s)	1282, 1756
BspPI	GGATC	8 cut(s)	336, 605, 618, 1029, 1154, 1571, 1730, 1743
BspQI	GCTCTTC	1 cut(s)	1674
BspT107I	GGYRCC	2 cut(s)	336, 563
BsrI	ACTGG	5 cut(s)	329, 831, 1155, 1735, 1967
BssECI	CCNNGG	5 cut(s)	616, 677, 1004, 1348, 1871
BssMI	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
BssNI	GRCGYC	4 cut(s)	282, 337, 477, 537
Bst2UI	CCWGG	6 cut(s)	533, 1005, 1164, 1508, 1757, 1872
Bst4CI	ACNGT	4 cut(s)	674, 1318, 1362, 1530
Bst6I	CTCTTC	2 cut(s)	1125, 1674
BstACI	GRCGYC	4 cut(s)	282, 337, 477, 537
BstAPI	GCANNNNNTGC	1 cut(s)	1769
BstC8I	GCNNGC	6 cut(s)	335, 687, 762, 1566, 1753, 1863
BstDEI	CTNAG	8 cut(s)	192, 349, 924, 1431, 1502, 1621, 1637, 1866
BstDSI	CCRYGG	2 cut(s)	616, 1348
BstENI	CCTNNNNNAGG	2 cut(s)	127, 1803
BstF5I	GGATG	5 cut(s)	106, 436, 832, 1159, 1672
BstH2I	RGCGCY	3 cut(s)	237, 340, 373
BstHHI	GCGC	4 cut(s)	214, 236, 339, 372
BstKTI	GATC	8 cut(s)	331, 613, 919, 1024, 1162, 1426, 1579, 1738
BstMAI	GTCTC	5 cut(s)	382, 433, 1127, 1225, 1633
BstMBI	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
BstMWI	GCNNNNNNNGC	8 cut(s)	290, 339, 413, 458, 464, 695, 1769, 1867
BstNI	CCWGG	6 cut(s)	533, 1005, 1164, 1508, 1757, 1872
BstPAI	GACNNNNGTC	1 cut(s)	1139
BstSCI	CCNGG	7 cut(s)	531, 677, 1003, 1162, 1506, 1755, 1870
BstSFI	CTRYAG	3 cut(s)	414, 462, 696
BstSLI	GKGCMC	1 cut(s)	1606
BstV1I	GCAGC	7 cut(s)	421, 448, 476, 682, 694, 710, 849
BstV2I	GAAGAC	2 cut(s)	170, 1356
BstX2I	RGATCY	4 cut(s)	610, 1021, 1576, 1735
BstXI	CCANNNNNNTGG	1 cut(s)	823
BstYI	RGATCY	4 cut(s)	610, 1021, 1576, 1735
BsuRI	GGCC	1 cut(s)	1755
BtgI	CCRYGG	2 cut(s)	616, 1348
BtrI	CACGTC	1 cut(s)	1190
BtsCI	GGATG	5 cut(s)	106, 436, 832, 1159, 1672
BtsIMutI	CAGTG	3 cut(s)	200, 838, 1526
BveI	ACCTGC	2 cut(s)	1282, 1756
Cac8I	GCNNGC	6 cut(s)	335, 687, 762, 1566, 1753, 1863
CfoI	GCGC	4 cut(s)	214, 236, 339, 372
Cfr13I	GGNCC	1 cut(s)	1940
CseI	GACGC	3 cut(s)	290, 389, 545
Csp6I	GTAC	4 cut(s)	1271, 1466, 1745, 1927
CviAII	CATG	3 cut(s)	647, 1438, 1607
CviQI	GTAC	4 cut(s)	1271, 1466, 1745, 1927
DdeI	CTNAG	8 cut(s)	192, 349, 924, 1431, 1502, 1621, 1637, 1866
DinI	GGCGCC	1 cut(s)	338
DpnI	GATC	8 cut(s)	330, 612, 918, 1023, 1161, 1425, 1578, 1737
DpnII	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
DraI	TTTAAA	3 cut(s)	268, 774, 1584
EaeI	YGGCCR	1 cut(s)	1753
Eam1104I	CTCTTC	2 cut(s)	1125, 1674
EarI	CTCTTC	2 cut(s)	1125, 1674
Eco24I	GRGCYC	2 cut(s)	1614, 1969
Eco32I	GATATC	1 cut(s)	1790
Eco47I	GGWCC	1 cut(s)	1940
Eco57I	CTGAAG	4 cut(s)	618, 882, 1122, 1698
Eco88I	CYCGRG	2 cut(s)	127, 1970
EcoNI	CCTNNNNNAGG	2 cut(s)	127, 1803
EcoRI	GAATTC	1 cut(s)	1342
EcoRII	CCWGG	6 cut(s)	531, 1003, 1162, 1506, 1755, 1870
EcoRV	GATATC	1 cut(s)	1790
EcoT38I	GRGCYC	2 cut(s)	1614, 1969
EgeI	GGCGCC	1 cut(s)	338
EheI	GGCGCC	1 cut(s)	338
Esp3I	CGTCTC	1 cut(s)	1633
FaeI	CATG	3 cut(s)	650, 1441, 1610
FalI	AAGNNNNNCTT	6 cut(s)	29, 61, 357, 389, 1371, 1403
FaqI	GGGAC	5 cut(s)	130, 218, 335, 660, 1687
FatI	CATG	3 cut(s)	646, 1437, 1606
FauI	CCCGC	1 cut(s)	1557
FblI	GTMKAC	1 cut(s)	1014
FokI	GGATG	5 cut(s)	93, 443, 839, 1166, 1679
FriOI	GRGCYC	2 cut(s)	1614, 1969
GlaI	GCGC	4 cut(s)	213, 235, 338, 371
GsuI	CTGGAG	1 cut(s)	200
HaeII	RGCGCY	3 cut(s)	237, 340, 373
HaeIII	GGCC	1 cut(s)	1755
HapII	CCGG	2 cut(s)	567, 679
HgaI	GACGC	3 cut(s)	290, 389, 545
HhaI	GCGC	4 cut(s)	214, 236, 339, 372
Hin1I	GRCGYC	4 cut(s)	282, 337, 477, 537
Hin1II	CATG	3 cut(s)	650, 1441, 1610
Hin6I	GCGC	4 cut(s)	212, 234, 337, 370
HinP1I	GCGC	4 cut(s)	212, 234, 337, 370
HincII	GTYRAC	2 cut(s)	1397, 1513
HindII	GTYRAC	2 cut(s)	1397, 1513
HindIII	AAGCTT	1 cut(s)	244
HinfI	GANTC	8 cut(s)	185, 206, 251, 441, 489, 797, 844, 854
HpaI	GTTAAC	1 cut(s)	1513
HpaII	CCGG	2 cut(s)	567, 679
HphI	GGTGA	7 cut(s)	758, 884, 905, 993, 1136, 1563, 1913
Hpy166II	GTNNAC	7 cut(s)	1015, 1397, 1513, 1604, 1904, 1940, 1960
Hpy188I	TCNGA	8 cut(s)	184, 303, 551, 598, 916, 925, 1268, 1624
Hpy188III	TCNNGA	7 cut(s)	217, 794, 952, 1533, 1916, 1970, 2012
Hpy8I	GTNNAC	7 cut(s)	1015, 1397, 1513, 1604, 1904, 1940, 1960
Hpy99I	CGWCG	6 cut(s)	80, 311, 405, 479, 482, 1191
HpyAV	CCTTC	9 cut(s)	108, 180, 392, 601, 970, 1003, 1115, 1285, 1456
HpyCH4III	ACNGT	4 cut(s)	674, 1318, 1362, 1530
HpyCH4IV	ACGT	4 cut(s)	258, 477, 1189, 1642
HpyCH4V	TGCA	9 cut(s)	416, 452, 464, 698, 887, 902, 1181, 1604, 1772
HpyF10VI	GCNNNNNNNGC	8 cut(s)	290, 339, 413, 458, 464, 695, 1769, 1867
HpyF3I	CTNAG	8 cut(s)	192, 349, 924, 1431, 1502, 1621, 1637, 1866
HpySE526I	ACGT	4 cut(s)	258, 477, 1189, 1642
Hsp92I	GRCGYC	4 cut(s)	282, 337, 477, 537
Hsp92II	CATG	3 cut(s)	650, 1441, 1610
HspAI	GCGC	4 cut(s)	212, 234, 337, 370
KasI	GGCGCC	1 cut(s)	336
KspAI	GTTAAC	1 cut(s)	1513
Kzo9I	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
LguI	GCTCTTC	1 cut(s)	1674
LmnI	GCTCC	7 cut(s)	22, 219, 643, 818, 1269, 1617, 1972
Lsp1109I	GCAGC	7 cut(s)	421, 448, 476, 682, 694, 710, 849
LweI	GCATC	7 cut(s)	146, 302, 421, 817, 889, 1087, 1144
MaeII	ACGT	4 cut(s)	258, 477, 1189, 1642
MaeIII	GTNAC	4 cut(s)	634, 668, 994, 1124
MalI	GATC	8 cut(s)	330, 612, 918, 1023, 1161, 1425, 1578, 1737
MboI	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
MfeI	CAATTG	1 cut(s)	453
MflI	RGATCY	4 cut(s)	610, 1021, 1576, 1735
MhlI	GDGCHC	3 cut(s)	1606, 1614, 1969
MlsI	TGGCCA	1 cut(s)	1755
MluNI	TGGCCA	1 cut(s)	1755
Mly113I	GGCGCC	1 cut(s)	337
MlyI	GAGTC	4 cut(s)	179, 200, 435, 498
MmeI	TCCRAC	3 cut(s)	44, 207, 1930
Mox20I	TGGCCA	1 cut(s)	1755
MroXI	GAANNNNTTC	1 cut(s)	1629
MscI	TGGCCA	1 cut(s)	1755
MseI	TTAA	9 cut(s)	267, 728, 773, 1332, 1487, 1512, 1583, 1721, 1932
MslI	CAYNNNNRTG	1 cut(s)	1559
Msp20I	TGGCCA	1 cut(s)	1755
MspA1I	CMGCKG	2 cut(s)	461, 701
MspI	CCGG	2 cut(s)	567, 679
MspR9I	CCNGG	7 cut(s)	533, 679, 1005, 1164, 1508, 1757, 1872
MunI	CAATTG	1 cut(s)	453
MvaI	CCWGG	6 cut(s)	533, 1005, 1164, 1508, 1757, 1872
MwoI	GCNNNNNNNGC	8 cut(s)	290, 339, 413, 458, 464, 695, 1769, 1867
NarI	GGCGCC	1 cut(s)	337
NciI	CCSGG	1 cut(s)	679
NdeII	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
NlaIII	CATG	3 cut(s)	650, 1441, 1610
NlaIV	GGNNCC	6 cut(s)	338, 565, 612, 1613, 1737, 1968
NmuCI	GTSAC	3 cut(s)	634, 994, 1124
PaeR7I	CTCGAG	1 cut(s)	127
PciSI	GCTCTTC	1 cut(s)	1674
PcsI	WCGNNNNNNNCGW	3 cut(s)	255, 1639, 1885
PdmI	GAANNNNTTC	1 cut(s)	1629
PfeI	GAWTC	4 cut(s)	251, 797, 844, 854
PfoI	TCCNGGA	1 cut(s)	1162
PleI	GAGTC	4 cut(s)	179, 200, 435, 497
PluTI	GGCGCC	1 cut(s)	340
PpsI	GAGTC	4 cut(s)	179, 200, 435, 497
PshAI	GACNNNNGTC	1 cut(s)	1139
Psp6I	CCWGG	6 cut(s)	531, 1003, 1162, 1506, 1755, 1870
PspGI	CCWGG	6 cut(s)	531, 1003, 1162, 1506, 1755, 1870
PspN4I	GGNNCC	6 cut(s)	338, 565, 612, 1613, 1737, 1968
PspPI	GGNCC	1 cut(s)	1940
PspXI	VCTCGAGB	1 cut(s)	127
PstI	CTGCAG	3 cut(s)	418, 466, 700
PsuI	RGATCY	4 cut(s)	610, 1021, 1576, 1735
PvuII	CAGCTG	1 cut(s)	701
RsaI	GTAC	4 cut(s)	1272, 1467, 1746, 1928
RsaNI	GTAC	4 cut(s)	1271, 1466, 1745, 1927
RseI	CAYNNNNRTG	1 cut(s)	1559
SapI	GCTCTTC	1 cut(s)	1674
SaqAI	TTAA	9 cut(s)	267, 728, 773, 1332, 1487, 1512, 1583, 1721, 1932
Sau3AI	GATC	8 cut(s)	328, 610, 916, 1021, 1159, 1423, 1576, 1735
Sau96I	GGNCC	1 cut(s)	1940
SchI	GAGTC	4 cut(s)	179, 200, 435, 498
ScrFI	CCNGG	7 cut(s)	533, 679, 1005, 1164, 1508, 1757, 1872
SduI	GDGCHC	3 cut(s)	1606, 1614, 1969
SfaNI	GCATC	7 cut(s)	146, 302, 421, 817, 889, 1087, 1144
SfcI	CTRYAG	3 cut(s)	414, 462, 696
SfoI	GGCGCC	1 cut(s)	338
Sfr274I	CTCGAG	1 cut(s)	127
SinI	GGWCC	1 cut(s)	1940
SlaI	CTCGAG	1 cut(s)	127
SmiMI	CAYNNNNRTG	1 cut(s)	1559
SmlI	CTYRAG	5 cut(s)	127, 386, 443, 952, 1694
SmoI	CTYRAG	5 cut(s)	127, 386, 443, 952, 1694
SsiI	CCGC	7 cut(s)	291, 340, 459, 540, 641, 1247, 1564
SspDI	GGCGCC	1 cut(s)	336
SspI	AATATT	1 cut(s)	1709
StyD4I	CCNGG	7 cut(s)	531, 677, 1003, 1162, 1506, 1755, 1870
TaaI	ACNGT	4 cut(s)	674, 1318, 1362, 1530
TaiI	ACGT	4 cut(s)	261, 480, 1192, 1645
TaqI	TCGA	7 cut(s)	128, 249, 357, 631, 1031, 1840, 1896
TaqII	GACCGA	1 cut(s)	320
TatI	WGTACW	1 cut(s)	1926
TauI	GCSGC	3 cut(s)	342, 461, 542
TfiI	GAWTC	4 cut(s)	251, 797, 844, 854
Tru1I	TTAA	9 cut(s)	267, 728, 773, 1332, 1487, 1512, 1583, 1721, 1932
Tru9I	TTAA	9 cut(s)	267, 728, 773, 1332, 1487, 1512, 1583, 1721, 1932
TscAI	CASTG	3 cut(s)	200, 838, 1533
TseFI	GTSAC	3 cut(s)	634, 994, 1124
TseI	GCWGC	7 cut(s)	434, 461, 464, 682, 695, 698, 837
Tsp45I	GTSAC	3 cut(s)	634, 994, 1124
TspDTI	ATGAA	4 cut(s)	1080, 1122, 1426, 1719
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	3 cut(s)	200, 838, 1533
VneI	GTGCAC	1 cut(s)	1602
VpaK11BI	GGWCC	1 cut(s)	1940
XagI	CCTNNNNNAGG	2 cut(s)	127, 1803
XapI	RAATTY	4 cut(s)	1258, 1342, 1646, 1823
XhoI	CTCGAG	1 cut(s)	127
XmiI	GTMKAC	1 cut(s)	1014
XmnI	GAANNNNTTC	1 cut(s)	1629
ZraI	GACGTC	1 cut(s)	478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.