Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000474.1

Orthogroup ID

OG0004166

Physical Location & Seq

Genomic Coordinates Forward (+)

43783 .. 50098

Gene Structure 6316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000474.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

atggcttccatctctgctccaaccccagctcctcacaaccttaccttccccaaccccaaatcctacccctcctccgcttcgaaaaccccattgtacccttcctcttcctctagattctccgattcatccctctgccggtgccggaacccttcctcctcctcctcctccgactcagtccattggagatgggactctgcgctccaggacctcgtcaaaaacgccatgaaacgactcttgggtcgagctgtaaatgtagaggattttgaggatgctgctaggctcaaggttgccattgctgccgcctccacaaacgacgtcgtcggctcagtcatttctcgtctcaatagagctatacaggacgagcgttaccaggaagcagcatttttccgggataatgccggtgctggattggtgggttggtgggctggcatctctaaggataagaaggaccctcacggcctaattattcgagtaactgcagagcatggacgatatgtcgcaaggagttatagtccccggcagctcgctacagctgcagctggtgttccactgtttgagatctttttaacagtgaataaaaagggtgaatacaaacaacaggctgtgtacttaaagcggggaggagtatttccagattctccacaagttagctccaaagcaatggacaccactaccaccttgaatcctttagattcaactgaagaaaaaagcgatctatttcttggaggtagtgacgatactgaagatggtgatgatatggatgaagatttggatctttctgagggactctctggattccagagcatcttgagggatatgattcctaatgtgaaggtcaaggtcttgaaagtgacatcaccaggaaaggtagatcgggatctaatatctaaagtgattgagcagatcatcgaggaagatgatgaagataaggataatgaaatcgagaattcagaagctgaagatgaggacgaggacgaagacgaagaaaaggttgaaggtgatcaagagacagatgtgattgaactggatgctgatcctgcaattattcaaaatgctgagagacaagaaattgcagttaaagttgtttttggtggttttgggcagaaaatatctaacatcccacctagtaaaaatttgctccgagtccctgctaaaatagagaagaaagggcgtctatccttttcttttactgttgagaaagatattaatcaacaggattctcgtgacaaggaacaaagttcaggagataaaaaagctaaagttggaggtcaacgtagcattgacaatgtaatgtttgatcttgctaagttcattggaaaagagaagataccattgaaggtactcaaagatgttggtgagttgataaatctcgctctcagtcaggttcataatcatcagccattgtcaggatccactactttcaatcgcattgaaatgcccgtttctcaagatccattaaatggactatacattggtgcacatgggctctatacctcagaagttattcacctgagacgtaagtttggccaatggaaagaagacaatgggactaaggaaccctcgaacctcgagttttatgaatatgtggaagccttaaaacttaccggggatccttatgtaccagctggccaggtggcattccgtgcaaagattgggaaaagatatcagcttcctcataaagggatcataccagaagaatttggagtggttgctcgatataaaggacaggggaggcttgctgagccagggtttcgtaatcctcgatgggtcgatggtgaacttgttattcttgatggaaagtacattaaaggaggacctgttgttgggtttgtttattgggccccagagtatcatttcttggtgttctttaatcgactgaggcttcaaggctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

630

Amino Acids

69.93

Weight (kDa)

5.34

Isoelectric Point (pI)

47.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004166)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33630 AT4G33630 AT4G33630
fragaria_vesca	FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660 FvH4_2g11660
malus_domestica	MD05G1048100.v1.1 MD10G1054700.v1.1
prunus_persica	Prupe.8G070300_v2.0.a1 Prupe.8G070300_v2.0.a1
pyrus_communis	pycom10g04160 pycom10g04170
rosa_chinensis	RchiOBHm_Chr6g0270901 RchiOBHm_Chr6g0270911
rosa_laevigata	RLG00000013760
rosa_multiflora	Rmu_co8045566.1_g000001 Rmu_sc0007274.1_g000002 Rmu_ssc0000474.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197500
rosa_rugosa	Rorug06G0057200
rosa_samantha	Rh6AG176700 Rh6BG180100 Rh6CG176200 Rh6DG168400
rosa_wichuraiana	Rw6G015060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	237
AatII	GACGTC	1 cut(s)	318
AccB1I	GGYRCC	1 cut(s)	138
AccB7I	CCANNNNNTGG	1 cut(s)	1460
AciI	CCGC	3 cut(s)	75, 300, 616
AclWI	GGATC	9 cut(s)	780, 885, 1028, 1404, 1417, 1445, 1604, 1617, 1691
AcoI	YGGCCR	2 cut(s)	1525, 1627
AcsI	RAATTY	3 cut(s)	946, 1132, 1697
AcuI	CTGAAG	3 cut(s)	720, 762, 978
AcyI	GRCGYC	2 cut(s)	315, 1171
AfaI	GTAC	5 cut(s)	95, 608, 1341, 1620, 1802
AfiI	CCNNNNNNNGG	5 cut(s)	135, 1406, 1460, 1679, 1823
AhdI	GACNNNNNGTC	1 cut(s)	494
AjnI	CCWGG	5 cut(s)	201, 369, 859, 1629, 1744
AjuI	GAANNNNNNNTTGG	2 cut(s)	218, 250
AloI	GAACNNNNNNTCC	2 cut(s)	137, 169
Alw21I	GWGCWC	1 cut(s)	1480
Alw26I	GTCTC	4 cut(s)	344, 1001, 1054, 1507
Alw44I	GTGCAC	1 cut(s)	1476
AlwI	GGATC	9 cut(s)	780, 885, 1028, 1404, 1417, 1445, 1604, 1617, 1691
AlwNI	CAGNNNCTG	1 cut(s)	956
Ama87I	CYCGRG	1 cut(s)	1568
AoxI	GGCC	4 cut(s)	457, 1525, 1627, 1839
ApaI	GGGCCC	1 cut(s)	1843
ApaLI	GTGCAC	1 cut(s)	1476
ApeKI	GCWGC	6 cut(s)	272, 296, 377, 520, 533, 536
ApoI	RAATTY	3 cut(s)	946, 1132, 1697
AseI	ATTAAT	1 cut(s)	1206
Asp700I	GAANNNNTTC	1 cut(s)	1503
AspLEI	GCGC	1 cut(s)	199
AspS9I	GGNCC	5 cut(s)	205, 448, 1814, 1839, 1840
AsuC2I	CCSGG	3 cut(s)	389, 517, 1606
AsuHPI	GGTGA	7 cut(s)	596, 761, 849, 1010, 1367, 1499, 1787
AsuII	TTCGAA	1 cut(s)	80
AvaI	CYCGRG	1 cut(s)	1568
AvaII	GGWCC	3 cut(s)	205, 448, 1814
BaeGI	GKGCMC	2 cut(s)	1480, 1843
BalI	TGGCCA	2 cut(s)	1527, 1629
BamHI	GGATCC	2 cut(s)	1409, 1609
BanI	GGYRCC	1 cut(s)	138
BanII	GRGCYC	2 cut(s)	1488, 1843
BauI	CACGAG	1 cut(s)	1221
BbsI	GAAGAC	2 cut(s)	984, 1545
Bbv12I	GWGCWC	1 cut(s)	1480
BbvI	GCAGC	6 cut(s)	259, 283, 389, 520, 532, 548
BccI	CCATC	6 cut(s)	17, 180, 740, 1758, 1766, 1787
BceAI	ACGGC	1 cut(s)	472
BciT130I	CCWGG	5 cut(s)	203, 371, 861, 1631, 1746
BclI	TGATCA	1 cut(s)	1000
BcnI	CCSGG	3 cut(s)	389, 517, 1606
BcoDI	GTCTC	4 cut(s)	344, 1001, 1054, 1507
BfaI	CTAG	4 cut(s)	111, 276, 1125, 1891
BfmI	CTRYAG	3 cut(s)	477, 528, 534
BglII	AGATCT	1 cut(s)	558
BisI	GCNGC	7 cut(s)	273, 297, 300, 378, 521, 534, 537
BlpI	GCTNAGC	1 cut(s)	1740
BlsI	GCNGC	7 cut(s)	274, 298, 301, 379, 522, 535, 538
Bme1390I	CCNGG	8 cut(s)	203, 371, 389, 517, 861, 1606, 1631, 1746
Bme18I	GGWCC	3 cut(s)	205, 448, 1814
BmeRI	GACNNNNNGTC	1 cut(s)	494
BmeT110I	CYCGRG	1 cut(s)	1568
BmgT120I	GGNCC	5 cut(s)	205, 448, 1814, 1839, 1840
BmiI	GGNNCC	8 cut(s)	140, 146, 450, 1411, 1557, 1611, 1841, 1842
BmrFI	CCNGG	8 cut(s)	203, 371, 389, 517, 861, 1606, 1631, 1746
BmsI	GCATC	4 cut(s)	259, 438, 813, 1018
BpiI	GAAGAC	2 cut(s)	984, 1545
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
BpmI	CTGGAG	1 cut(s)	185
Bpu1102I	GCTNAGC	1 cut(s)	1740
Bpu14I	TTCGAA	1 cut(s)	80
BpuEI	CTTGAG	3 cut(s)	266, 829, 1431
BpuMI	CCSGG	3 cut(s)	389, 517, 1606
BsaBI	GATNNNNATC	4 cut(s)	771, 876, 1032, 1206
BsaHI	GRCGYC	2 cut(s)	315, 1171
BsaJI	CCNNGG	3 cut(s)	515, 1605, 1745
Bsc4I	CCNNNNNNNGG	5 cut(s)	135, 1406, 1460, 1679, 1823
Bse118I	RCCGGY	2 cut(s)	135, 398
Bse1I	ACTGG	1 cut(s)	1029
Bse3DI	GCAATG	2 cut(s)	291, 666
Bse8I	GATNNNNATC	4 cut(s)	771, 876, 1032, 1206
BseBI	CCWGG	5 cut(s)	203, 371, 861, 1631, 1746
BseDI	CCNNGG	3 cut(s)	515, 1605, 1745
BseGI	GGATG	5 cut(s)	125, 274, 766, 1033, 1116
BseJI	GATNNNNATC	4 cut(s)	771, 876, 1032, 1206
BseLI	CCNNNNNNNGG	5 cut(s)	135, 1406, 1460, 1679, 1823
BseMI	GCAATG	2 cut(s)	291, 666
BseMII	CTCAG	9 cut(s)	186, 339, 771, 1047, 1390, 1502, 1509, 1731, 1868
BseNI	ACTGG	1 cut(s)	1029
BseRI	GAGGAG	7 cut(s)	21, 61, 145, 148, 151, 154, 636
BseSI	GKGCMC	2 cut(s)	1480, 1843
BseXI	GCAGC	6 cut(s)	259, 283, 389, 520, 532, 548
BseYI	CCCAGC	1 cut(s)	25
BshFI	GGCC	4 cut(s)	459, 1527, 1629, 1841
BshNI	GGYRCC	1 cut(s)	138
BsiHKAI	GWGCWC	1 cut(s)	1480
BsiHKCI	CYCGRG	1 cut(s)	1568
BsiSI	CCGG	6 cut(s)	136, 142, 388, 399, 517, 1605
BslFI	GGGAC	5 cut(s)	203, 498, 798, 1130, 1561
BslI	CCNNNNNNNGG	5 cut(s)	135, 1406, 1460, 1679, 1823
BsmAI	GTCTC	4 cut(s)	344, 1001, 1054, 1507
BsmBI	CGTCTC	2 cut(s)	344, 1507
BsmFI	GGGAC	5 cut(s)	203, 498, 798, 1130, 1561
BsmI	GAATGC	1 cut(s)	1637
BsnI	GGCC	4 cut(s)	459, 1527, 1629, 1841
BsoBI	CYCGRG	1 cut(s)	1568
Bsp119I	TTCGAA	1 cut(s)	80
Bsp120I	GGGCCC	1 cut(s)	1839
Bsp1286I	GDGCHC	3 cut(s)	1480, 1488, 1843
Bsp1720I	GCTNAGC	1 cut(s)	1740
BspACI	CCGC	3 cut(s)	75, 300, 616
BspANI	GGCC	4 cut(s)	459, 1527, 1629, 1841
BspCNI	CTCAG	9 cut(s)	185, 338, 772, 1048, 1389, 1503, 1508, 1732, 1869
BspLI	GGNNCC	8 cut(s)	140, 146, 450, 1411, 1557, 1611, 1841, 1842
BspMAI	CTGCAG	2 cut(s)	481, 538
BspPI	GGATC	9 cut(s)	780, 885, 1028, 1404, 1417, 1445, 1604, 1617, 1691
BspT104I	TTCGAA	1 cut(s)	80
BspT107I	GGYRCC	1 cut(s)	138
BsrDI	GCAATG	2 cut(s)	291, 666
BsrFI	RCCGGY	2 cut(s)	135, 398
BsrI	ACTGG	1 cut(s)	1029
BssAI	RCCGGY	2 cut(s)	135, 398
BssECI	CCNNGG	3 cut(s)	515, 1605, 1745
BssNI	GRCGYC	2 cut(s)	315, 1171
BssSI	CACGAG	1 cut(s)	1221
Bst2BI	CACGAG	1 cut(s)	1221
Bst2UI	CCWGG	5 cut(s)	203, 371, 861, 1631, 1746
Bst4CI	ACNGT	3 cut(s)	552, 571, 1192
Bst6I	CTCTTC	1 cut(s)	109
BstACI	GRCGYC	2 cut(s)	315, 1171
BstAPI	GCANNNNNTGC	1 cut(s)	1643
BstBI	TTCGAA	1 cut(s)	80
BstC8I	GCNNGC	4 cut(s)	427, 525, 1627, 1737
BstENI	CCTNNNNNAGG	1 cut(s)	1677
BstF5I	GGATG	5 cut(s)	125, 274, 766, 1033, 1116
BstHHI	GCGC	1 cut(s)	199
BstMAI	GTCTC	4 cut(s)	344, 1001, 1054, 1507
BstMWI	GCNNNNNNNGC	5 cut(s)	296, 533, 1037, 1643, 1741
BstNI	CCWGG	5 cut(s)	203, 371, 861, 1631, 1746
BstSCI	CCNGG	8 cut(s)	201, 369, 387, 515, 859, 1604, 1629, 1744
BstSFI	CTRYAG	3 cut(s)	477, 528, 534
BstSLI	GKGCMC	2 cut(s)	1480, 1843
BstV1I	GCAGC	6 cut(s)	259, 283, 389, 520, 532, 548
BstV2I	GAAGAC	2 cut(s)	984, 1545
BstX2I	RGATCY	6 cut(s)	558, 772, 877, 1409, 1450, 1609
BstXI	CCANNNNNNTGG	1 cut(s)	661
BstYI	RGATCY	6 cut(s)	558, 772, 877, 1409, 1450, 1609
BsuRI	GGCC	4 cut(s)	459, 1527, 1629, 1841
BtsCI	GGATG	5 cut(s)	125, 274, 766, 1033, 1116
BtsIMutI	CAGTG	2 cut(s)	548, 576
Cac8I	GCNNGC	4 cut(s)	427, 525, 1627, 1737
CaiI	CAGNNNCTG	1 cut(s)	956
CfoI	GCGC	1 cut(s)	199
Cfr10I	RCCGGY	2 cut(s)	135, 398
Cfr13I	GGNCC	5 cut(s)	205, 448, 1814, 1839, 1840
CseI	GACGC	1 cut(s)	1160
Csp6I	GTAC	5 cut(s)	94, 607, 1340, 1619, 1801
CviAII	CATG	3 cut(s)	223, 485, 1481
CviQI	GTAC	5 cut(s)	94, 607, 1340, 1619, 1801
DrdI	GACNNNNNNGTC	1 cut(s)	237
DriI	GACNNNNNGTC	1 cut(s)	494
DseDI	GACNNNNNNGTC	1 cut(s)	237
EaeI	YGGCCR	2 cut(s)	1525, 1627
Eam1104I	CTCTTC	1 cut(s)	109
Eam1105I	GACNNNNNGTC	1 cut(s)	494
EarI	CTCTTC	1 cut(s)	109
Eco24I	GRGCYC	2 cut(s)	1488, 1843
Eco32I	GATATC	1 cut(s)	1664
Eco47I	GGWCC	3 cut(s)	205, 448, 1814
Eco57I	CTGAAG	3 cut(s)	720, 762, 978
Eco88I	CYCGRG	1 cut(s)	1568
EcoNI	CCTNNNNNAGG	1 cut(s)	1677
EcoO109I	RGGNCCY	4 cut(s)	205, 448, 1814, 1840
EcoRI	GAATTC	1 cut(s)	946
EcoRII	CCWGG	5 cut(s)	201, 369, 859, 1629, 1744
EcoRV	GATATC	1 cut(s)	1664
EcoT38I	GRGCYC	2 cut(s)	1488, 1843
Esp3I	CGTCTC	2 cut(s)	344, 1507
FaeI	CATG	3 cut(s)	226, 488, 1484
FaqI	GGGAC	5 cut(s)	203, 498, 798, 1130, 1561
FatI	CATG	3 cut(s)	222, 484, 1480
FauI	CCCGC	1 cut(s)	609
FbaI	TGATCA	1 cut(s)	1000
Fnu4HI	GCNGC	7 cut(s)	273, 297, 300, 378, 521, 534, 537
FokI	GGATG	5 cut(s)	112, 281, 773, 1040, 1103
FriOI	GRGCYC	2 cut(s)	1488, 1843
Fsp4HI	GCNGC	7 cut(s)	273, 297, 300, 378, 521, 534, 537
FspBI	CTAG	4 cut(s)	111, 276, 1125, 1891
GlaI	GCGC	1 cut(s)	198
GluI	GCNGC	7 cut(s)	273, 297, 300, 378, 521, 534, 537
GsaI	CCCAGC	1 cut(s)	29
GsuI	CTGGAG	1 cut(s)	185
HaeIII	GGCC	4 cut(s)	459, 1527, 1629, 1841
HapII	CCGG	6 cut(s)	136, 142, 388, 399, 517, 1605
HgaI	GACGC	1 cut(s)	1160
HhaI	GCGC	1 cut(s)	199
Hin1I	GRCGYC	2 cut(s)	315, 1171
Hin1II	CATG	3 cut(s)	226, 488, 1484
Hin6I	GCGC	1 cut(s)	197
HinP1I	GCGC	1 cut(s)	197
HincII	GTYRAC	1 cut(s)	1271
HindII	GTYRAC	1 cut(s)	1271
HpaII	CCGG	6 cut(s)	136, 142, 388, 399, 517, 1605
HphI	GGTGA	7 cut(s)	596, 761, 849, 1010, 1367, 1499, 1787
Hpy166II	GTNNAC	4 cut(s)	607, 1271, 1478, 1778
Hpy188I	TCNGA	6 cut(s)	121, 169, 781, 952, 1142, 1498
Hpy8I	GTNNAC	4 cut(s)	607, 1271, 1478, 1778
Hpy99I	CGWCG	3 cut(s)	317, 320, 323
HpyAV	CCTTC	7 cut(s)	55, 108, 159, 439, 826, 989, 1330
HpyCH4III	ACNGT	3 cut(s)	552, 571, 1192
HpyCH4IV	ACGT	3 cut(s)	315, 1273, 1516
HpyCH4V	TGCA	6 cut(s)	479, 536, 1040, 1073, 1478, 1646
HpyF10VI	GCNNNNNNNGC	5 cut(s)	296, 533, 1037, 1643, 1741
HpySE526I	ACGT	3 cut(s)	315, 1273, 1516
Hsp92I	GRCGYC	2 cut(s)	315, 1171
Hsp92II	CATG	3 cut(s)	226, 488, 1484
HspAI	GCGC	1 cut(s)	197
Ksp22I	TGATCA	1 cut(s)	1000
LmnI	GCTCC	5 cut(s)	22, 34, 204, 656, 1143
Lsp1109I	GCAGC	6 cut(s)	259, 283, 389, 520, 532, 548
LweI	GCATC	4 cut(s)	259, 438, 813, 1018
MaeI	CTAG	4 cut(s)	111, 276, 1125, 1891
MaeII	ACGT	3 cut(s)	315, 1273, 1516
MaeIII	GTNAC	5 cut(s)	365, 472, 731, 850, 1223
MflI	RGATCY	6 cut(s)	558, 772, 877, 1409, 1450, 1609
MhlI	GDGCHC	3 cut(s)	1480, 1488, 1843
MlsI	TGGCCA	2 cut(s)	1527, 1629
MluCI	AATT	6 cut(s)	462, 946, 1041, 1068, 1132, 1697
MluNI	TGGCCA	2 cut(s)	1527, 1629
MlyI	GAGTC	5 cut(s)	164, 185, 225, 780, 1152
MmeI	TCCRAC	3 cut(s)	44, 192, 1243
Mox20I	TGGCCA	2 cut(s)	1527, 1629
MroXI	GAANNNNTTC	1 cut(s)	1503
MscI	TGGCCA	2 cut(s)	1527, 1629
MseI	TTAA	8 cut(s)	566, 611, 1077, 1206, 1457, 1595, 1806, 1869
MslI	CAYNNNNRTG	1 cut(s)	1433
Msp20I	TGGCCA	2 cut(s)	1527, 1629
MspA1I	CMGCKG	3 cut(s)	533, 539, 1625
MspI	CCGG	6 cut(s)	136, 142, 388, 399, 517, 1605
MspR9I	CCNGG	8 cut(s)	203, 371, 389, 517, 861, 1606, 1631, 1746
Mva1269I	GAATGC	1 cut(s)	1637
MvaI	CCWGG	5 cut(s)	203, 371, 861, 1631, 1746
MwoI	GCNNNNNNNGC	5 cut(s)	296, 533, 1037, 1643, 1741
NciI	CCSGG	3 cut(s)	389, 517, 1606
NlaIII	CATG	3 cut(s)	226, 488, 1484
NlaIV	GGNNCC	8 cut(s)	140, 146, 450, 1411, 1557, 1611, 1841, 1842
NmuCI	GTSAC	3 cut(s)	731, 850, 1223
NspV	TTCGAA	1 cut(s)	80
PaeR7I	CTCGAG	1 cut(s)	1568
PcsI	WCGNNNNNNNCGW	1 cut(s)	1759
PctI	GAATGC	1 cut(s)	1637
PdmI	GAANNNNTTC	1 cut(s)	1503
PfeI	GAWTC	8 cut(s)	114, 122, 635, 682, 692, 795, 820, 1217
PflFI	GACNNNGTC	3 cut(s)	173, 209, 317
PflMI	CCANNNNNTGG	1 cut(s)	1460
PfoI	TCCNGGA	2 cut(s)	201, 387
PkrI	GCNGC	7 cut(s)	274, 298, 301, 379, 522, 535, 538
PleI	GAGTC	5 cut(s)	164, 185, 225, 780, 1151
PpsI	GAGTC	5 cut(s)	164, 185, 225, 780, 1151
PpuMI	RGGWCCY	3 cut(s)	205, 448, 1814
PshBI	ATTAAT	1 cut(s)	1206
Psp5II	RGGWCCY	3 cut(s)	205, 448, 1814
Psp6I	CCWGG	5 cut(s)	201, 369, 859, 1629, 1744
PspFI	CCCAGC	1 cut(s)	25
PspGI	CCWGG	5 cut(s)	201, 369, 859, 1629, 1744
PspN4I	GGNNCC	8 cut(s)	140, 146, 450, 1411, 1557, 1611, 1841, 1842
PspOMI	GGGCCC	1 cut(s)	1839
PspPI	GGNCC	5 cut(s)	205, 448, 1814, 1839, 1840
PspPPI	RGGWCCY	3 cut(s)	205, 448, 1814
PspXI	VCTCGAGB	1 cut(s)	1568
PstI	CTGCAG	2 cut(s)	481, 538
PstNI	CAGNNNCTG	1 cut(s)	956
PsuI	RGATCY	6 cut(s)	558, 772, 877, 1409, 1450, 1609
PsyI	GACNNNGTC	3 cut(s)	173, 209, 317
PvuII	CAGCTG	3 cut(s)	533, 539, 1625
RsaI	GTAC	5 cut(s)	95, 608, 1341, 1620, 1802
RsaNI	GTAC	5 cut(s)	94, 607, 1340, 1619, 1801
RseI	CAYNNNNRTG	1 cut(s)	1433
SaqAI	TTAA	8 cut(s)	566, 611, 1077, 1206, 1457, 1595, 1806, 1869
SatI	GCNGC	7 cut(s)	273, 297, 300, 378, 521, 534, 537
Sau96I	GGNCC	5 cut(s)	205, 448, 1814, 1839, 1840
SchI	GAGTC	5 cut(s)	164, 185, 225, 780, 1152
ScrFI	CCNGG	8 cut(s)	203, 371, 389, 517, 861, 1606, 1631, 1746
SduI	GDGCHC	3 cut(s)	1480, 1488, 1843
SfaNI	GCATC	4 cut(s)	259, 438, 813, 1018
SfcI	CTRYAG	3 cut(s)	477, 528, 534
Sfr274I	CTCGAG	1 cut(s)	1568
SfuI	TTCGAA	1 cut(s)	80
SinI	GGWCC	3 cut(s)	205, 448, 1814
SlaI	CTCGAG	1 cut(s)	1568
SmiMI	CAYNNNNRTG	1 cut(s)	1433
SmlI	CTYRAG	4 cut(s)	281, 808, 1446, 1568
SmoI	CTYRAG	4 cut(s)	281, 808, 1446, 1568
Sse9I	AATT	6 cut(s)	462, 946, 1041, 1068, 1132, 1697
SsiI	CCGC	3 cut(s)	75, 300, 616
SspMI	CTAG	4 cut(s)	111, 276, 1125, 1891
StyD4I	CCNGG	8 cut(s)	201, 369, 387, 515, 859, 1604, 1629, 1744
TaaI	ACNGT	3 cut(s)	552, 571, 1192
TaiI	ACGT	3 cut(s)	318, 1276, 1519
TasI	AATT	6 cut(s)	462, 946, 1041, 1068, 1132, 1697
TatI	WGTACW	2 cut(s)	606, 1800
TauI	GCSGC	1 cut(s)	302
TfiI	GAWTC	8 cut(s)	114, 122, 635, 682, 692, 795, 820, 1217
Tru1I	TTAA	8 cut(s)	566, 611, 1077, 1206, 1457, 1595, 1806, 1869
Tru9I	TTAA	8 cut(s)	566, 611, 1077, 1206, 1457, 1595, 1806, 1869
TscAI	CASTG	2 cut(s)	555, 576
TseFI	GTSAC	3 cut(s)	731, 850, 1223
TseI	GCWGC	6 cut(s)	272, 296, 377, 520, 533, 536
Tsp45I	GTSAC	3 cut(s)	731, 850, 1223
TspDTI	ATGAA	8 cut(s)	114, 239, 777, 936, 951, 1300, 1376, 1593
TspGWI	ACGGA	1 cut(s)	1631
TspRI	CASTG	2 cut(s)	555, 576
Tth111I	GACNNNGTC	3 cut(s)	173, 209, 317
Van91I	CCANNNNNTGG	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1476
VpaK11BI	GGWCC	3 cut(s)	205, 448, 1814
VspI	ATTAAT	1 cut(s)	1206
XagI	CCTNNNNNAGG	1 cut(s)	1677
XapI	RAATTY	3 cut(s)	946, 1132, 1697
XbaI	TCTAGA	1 cut(s)	110
XhoI	CTCGAG	1 cut(s)	1568
XmnI	GAANNNNTTC	1 cut(s)	1503
XspI	CTAG	4 cut(s)	111, 276, 1125, 1891
ZraI	GACGTC	1 cut(s)	316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.